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Gene: Gsc (goosecoid homeobox) Rattus norvegicus
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Symbol: Gsc
Name: goosecoid homeobox
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and transcription factor binding activity. Predicted to be involved in several processes, including animal organ development; dorsal/ventral neural tube patterning; and regulation of gene expression. Predicted to localize to transcription regulator complex. Orthologous to human GSC (goosecoid homeobox); INTERACTS WITH ammonium chloride; bisphenol A; triadimefon.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: goosecoid; homeobox protein goosecoid
Orthologs:
Homo sapiens (human) : GSC (goosecoid homeobox)  HGNC  Alliance
Mus musculus (house mouse) : Gsc (goosecoid homeobox)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gsc (goosecoid homeobox)
Pan paniscus (bonobo/pygmy chimpanzee) : GSC (goosecoid homeobox)
Canis lupus familiaris (dog) : GSC (goosecoid homeobox)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gsc (goosecoid homeobox)
Sus scrofa (pig) : GSC (goosecoid homeobox)
Chlorocebus sabaeus (African green monkey) : GSC (goosecoid homeobox)
Heterocephalus glaber (naked mole-rat) : Gsc (goosecoid homeobox)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06128,147,181 - 128,149,220 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6128,147,181 - 128,149,220 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06137,350,766 - 137,352,805 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46128,526,645 - 128,528,684 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16128,531,182 - 128,532,078 (-)NCBI
Celera6120,865,501 - 120,867,540 (-)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gsc
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 631425
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.