Gene: Hif1a (hypoxia inducible factor 1 subunit alpha) Rattus norvegicus
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Symbol: Hif1a
Name: hypoxia inducible factor 1 subunit alpha
Description: ENCODES a protein that exhibits protein heterodimerization activity; protein-containing complex binding; sequence-specific DNA binding; INVOLVED IN acute-phase response; cellular response to carbon monoxide; cellular response to cobalt ion; PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute kidney failure; Acute-Phase Reaction; Alcoholic Liver Diseases; FOUND IN cytoplasm; nucleus; cytosol (ortholog); INTERACTS WITH (+)-pilocarpine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: HIF-1 alpha; HIF-1-alpha; HIF1 alpha; HIF1-alpha; hypoxia inducible factor 1 alpha subunit; hypoxia inducible factor 1, alpha subunit; hypoxia-inducible factor 1 alpha; hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor); hypoxia-inducible factor 1-alpha; MOP1
Orthologs:
Homo sapiens (human) : HIF1A (hypoxia inducible factor 1 subunit alpha)  HGNC  Alliance
Mus musculus (house mouse) : Hif1a (hypoxia inducible factor 1, alpha subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hif1a (hypoxia inducible factor 1 subunit alpha)
Pan paniscus (bonobo/pygmy chimpanzee) : HIF1A (hypoxia inducible factor 1 subunit alpha)
Canis lupus familiaris (dog) : HIF1A (hypoxia inducible factor 1 subunit alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hif1a (hypoxia inducible factor 1 subunit alpha)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0696,810,868 - 96,856,303 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06106,242,409 - 106,287,957 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4696,419,024 - 96,463,891 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1696,422,479 - 96,467,347 (+)NCBI
Celera691,083,300 - 91,128,125 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
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Gene Ontology Annotations
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References - curated
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RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
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Strain Variation

Strain Sequence Variants (Rnor 5.0)