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Gene: Rfx4 (regulatory factor X4) Rattus norvegicus
Symbol: Rfx4
Name: regulatory factor X4
RGD ID: 1562092
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in central nervous system development; cilium assembly; and regulation of gene expression. Predicted to localize to nuclear chromatin. Orthologous to human RFX4 (regulatory factor X4); INTERACTS WITH 1,3-dinitrobenzene; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500818; LOW QUALITY PROTEIN: transcription factor RFX4; regulatory factor X, 4 (influences HLA class II expression); RGD1562092; similar to regulatory factor X 4 variant; transcription factor RFX4
Homo sapiens (human) : RFX4 (regulatory factor X4)  HGNC  Alliance
Mus musculus (house mouse) : Rfx4 (regulatory factor X, 4 (influences HLA class II expression))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rfx4 (regulatory factor X4)
Pan paniscus (bonobo/pygmy chimpanzee) : RFX4 (regulatory factor X4)
Canis lupus familiaris (dog) : RFX4 (regulatory factor X4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rfx4 (regulatory factor X4)
Sus scrofa (pig) : RFX4 (regulatory factor X4)
Chlorocebus sabaeus (African green monkey) : RFX4 (regulatory factor X4)
Heterocephalus glaber (naked mole-rat) : Rfx4 (regulatory factor X4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0725,831,358 - 25,909,976 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl725,808,419 - 25,907,849 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0725,966,111 - 26,038,982 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4720,976,369 - 21,052,088 (-)NCBIRGSC3.4rn4RGSC3.4
Celera716,067,975 - 16,205,907 (-)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Rfx4
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562092
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.