Csnk2a2 (casein kinase 2 alpha 2) - Rat Genome Database

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Gene: Csnk2a2 (casein kinase 2 alpha 2) Rattus norvegicus
Analyze
Symbol: Csnk2a2
Name: casein kinase 2 alpha 2
RGD ID: 1306882
Description: Predicted to enable protein serine/threonine kinase activity. Involved in cerebral cortex development; liver regeneration; and spermatogenesis. Located in acrosomal vesicle and chromatin. Orthologous to human CSNK2A2 (casein kinase 2 alpha 2); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; INTERACTS WITH 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil; amitrole.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: casein kinase 2, alpha prime polypeptide; casein kinase II subunit alpha'; casein kinase II, alpha 2, polypeptide; LOC307641
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8199,562,340 - 9,602,136 (+)NCBIGRCr8
mRatBN7.2199,556,443 - 9,596,080 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl199,556,260 - 9,596,080 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx199,521,860 - 9,561,150 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,288,686 - 10,327,976 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0199,575,016 - 9,614,306 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0199,972,537 - 10,012,043 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl199,972,537 - 10,012,043 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0199,956,494 - 9,996,397 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,015,369 - 10,054,662 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11910,020,174 - 10,054,722 (+)NCBI
Celera199,448,494 - 9,487,786 (+)NCBICelera
Cytogenetic Map19p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
aristolochic acid A  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
buspirone  (EXP)
C60 fullerene  (EXP)
cadmium dichloride  (ISO)
caffeine  (EXP)
carbamazepine  (ISO)
chloroprene  (EXP)
cisplatin  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
daidzein  (ISO)
diazinon  (ISO)
diclofenac  (ISO)
diethylstilbestrol  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethyl methanesulfonate  (ISO)
fenthion  (ISO)
flutamide  (EXP)
folic acid  (ISO)
gentamycin  (EXP)
ivermectin  (ISO)
lead diacetate  (ISO)
lead(0)  (ISO)
methidathion  (ISO)
methimazole  (EXP)
methoxyacetic acid  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (EXP)
Monobutylphthalate  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-Vinyl-2-pyrrolidone  (EXP)
nickel dichloride  (EXP)
ozone  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
phytoestrogen  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (ISO)
quercetin  (ISO)
quercitrin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP,ISO)
rotenone  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
staurosporine  (ISO)
sulfadimethoxine  (EXP)
sulindac  (ISO)
sunitinib  (ISO)
thapsigargin  (ISO)
thiram  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
troglitazone  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vanadium atom  (ISO)
vanadium(0)  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Differential localization of alpha' and beta subunits of protein kinase CK2 during rat spermatogenesis. Alvarado-Diaz CP, etal., Cell Tissue Res. 2009 Oct;338(1):139-49. doi: 10.1007/s00441-009-0847-1. Epub 2009 Aug 27.
2. Regulation of protein kinase CK2 isoform expression during rat brain development. Diaz-Nido J, etal., Cell Mol Biol Res. 1994;40(5-6):581-5.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Expression of protein kinase CK2 in astroglial cells of normal and neovascularized retina. Kramerov AA, etal., Am J Pathol. 2006 May;168(5):1722-36.
6. Role of autophosphorylation in regulation of protein kinase CK2 from rat neuronal chromatin. Kulikova OG and Reikhardt BA, Biochemistry (Mosc). 1998 Dec;63(12):1400-6.
7. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
8. Changes in the activity of nuclear protein kinase CK2 during rat liver regeneration. Pancetti F, etal., Biochem Biophys Res Commun. 1996 Jan 5;218(1):35-9.
9. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
10. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
11. GOA pipeline RGD automated data pipeline
12. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
13. Comprehensive gene review and curation RGD comprehensive gene curation
14. The tight association of protein kinase CK2 with plasma membranes is mediated by a specific domain of its regulatory beta-subunit. Sarrouilhe D, etal., Biochim Biophys Acta. 1998 Jun 22;1403(2):199-210.
15. Selective removal of mitochondria via mitophagy: distinct pathways for different mitochondrial stresses. Wei H, etal., Biochim Biophys Acta. 2015 Oct;1853(10 Pt B):2784-90. doi: 10.1016/j.bbamcr.2015.03.013. Epub 2015 Apr 1.
Additional References at PubMed
PMID:9694889   PMID:9930856   PMID:11704824   PMID:11972058   PMID:12477932   PMID:14644449   PMID:18496528   PMID:21282530   PMID:21630459   PMID:22206666   PMID:24912190   PMID:25931508  
PMID:27998980   PMID:28031292   PMID:31505169  


Genomics

Comparative Map Data
Csnk2a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8199,562,340 - 9,602,136 (+)NCBIGRCr8
mRatBN7.2199,556,443 - 9,596,080 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl199,556,260 - 9,596,080 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx199,521,860 - 9,561,150 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,288,686 - 10,327,976 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0199,575,016 - 9,614,306 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0199,972,537 - 10,012,043 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl199,972,537 - 10,012,043 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0199,956,494 - 9,996,397 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,015,369 - 10,054,662 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11910,020,174 - 10,054,722 (+)NCBI
Celera199,448,494 - 9,487,786 (+)NCBICelera
Cytogenetic Map19p13NCBI
CSNK2A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381658,157,907 - 58,198,106 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1658,157,907 - 58,198,106 (-)EnsemblGRCh38hg38GRCh38
GRCh371658,191,811 - 58,232,010 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361656,749,312 - 56,789,283 (-)NCBINCBI36Build 36hg18NCBI36
Build 341656,749,314 - 56,789,283NCBI
Celera1642,691,263 - 42,731,230 (-)NCBICelera
Cytogenetic Map16q21NCBI
HuRef1644,059,729 - 44,099,930 (-)NCBIHuRef
CHM1_11659,598,846 - 59,638,724 (-)NCBICHM1_1
T2T-CHM13v2.01663,953,540 - 63,993,732 (-)NCBIT2T-CHM13v2.0
Csnk2a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39896,172,724 - 96,215,505 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl896,172,724 - 96,216,667 (-)EnsemblGRCm39 Ensembl
GRCm38895,446,096 - 95,488,868 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl895,446,096 - 95,490,039 (-)EnsemblGRCm38mm10GRCm38
MGSCv37897,969,996 - 98,012,720 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36898,337,101 - 98,377,919 (-)NCBIMGSCv36mm8
Celera899,760,768 - 99,802,427 (-)NCBICelera
Cytogenetic Map8C5- D1NCBI
cM Map847.12NCBI
Csnk2a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543315,674,116 - 15,718,894 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543315,677,788 - 15,718,894 (-)NCBIChiLan1.0ChiLan1.0
CSNK2A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21867,620,768 - 67,660,961 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11673,541,651 - 73,581,859 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01638,426,399 - 38,466,575 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11657,557,262 - 57,596,218 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1657,557,270 - 57,596,218 (-)Ensemblpanpan1.1panPan2
CSNK2A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1258,361,328 - 58,441,701 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl258,360,838 - 58,432,371 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha254,991,254 - 55,071,046 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0258,899,781 - 58,979,588 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl258,899,298 - 58,971,571 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1255,731,413 - 55,811,164 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0256,739,015 - 56,818,751 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0257,631,725 - 57,711,511 (+)NCBIUU_Cfam_GSD_1.0
Csnk2a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934949,513,855 - 49,558,667 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647510,033,717 - 10,075,511 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647510,030,408 - 10,073,576 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CSNK2A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,976,930 - 20,016,923 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1619,975,030 - 20,016,768 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,998,939 - 18,074,082 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CSNK2A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1544,093,320 - 44,133,352 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl544,093,215 - 44,133,335 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604732,045,388 - 32,085,772 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Csnk2a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,012,556 - 28,060,413 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474628,012,543 - 28,064,610 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Csnk2a2
168 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:312
Count of miRNA genes:188
Interacting mature miRNAs:228
Transcripts:ENSRNOT00000016386
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat

Markers in Region
RH132275  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2199,594,284 - 9,594,478 (+)MAPPERmRatBN7.2
Rnor_6.01910,010,248 - 10,010,441NCBIRnor6.0
Rnor_5.0199,994,602 - 9,994,795UniSTSRnor5.0
RGSC_v3.41910,052,867 - 10,053,060UniSTSRGSC3.4
Celera199,485,991 - 9,486,184UniSTS
RH 3.4 Map1993.0UniSTS
Cytogenetic Map19p13UniSTS
RH134385  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2199,576,342 - 9,576,537 (+)MAPPERmRatBN7.2
Rnor_6.0199,992,306 - 9,992,500NCBIRnor6.0
Rnor_5.0199,976,660 - 9,976,854UniSTSRnor5.0
RGSC_v3.41910,034,925 - 10,035,119UniSTSRGSC3.4
Celera199,468,048 - 9,468,242UniSTS
RH 3.4 Map1993.39UniSTS
Cytogenetic Map19p13UniSTS
BE107780  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2199,578,322 - 9,578,480 (+)MAPPERmRatBN7.2
Rnor_6.0199,994,286 - 9,994,443NCBIRnor6.0
Rnor_5.0199,978,640 - 9,978,797UniSTSRnor5.0
RGSC_v3.41910,036,905 - 10,037,062UniSTSRGSC3.4
Celera199,470,028 - 9,470,185UniSTS
RH 3.4 Map1990.3UniSTS
Cytogenetic Map19p13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000016386   ⟹   ENSRNOP00000016386
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl199,556,260 - 9,596,080 (+)Ensembl
Rnor_6.0 Ensembl199,972,537 - 10,012,043 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000107442   ⟹   ENSRNOP00000097267
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl199,556,260 - 9,596,080 (+)Ensembl
RefSeq Acc Id: NM_001107409   ⟹   NP_001100879
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,716 - 9,602,136 (+)NCBI
mRatBN7.2199,556,655 - 9,596,080 (+)NCBI
Rnor_6.0199,972,537 - 10,012,043 (+)NCBI
Rnor_5.0199,956,494 - 9,996,397 (+)NCBI
RGSC_v3.41910,015,369 - 10,054,662 (+)RGD
Celera199,448,494 - 9,487,786 (+)RGD
Sequence:
RefSeq Acc Id: XM_039097690   ⟹   XP_038953618
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,340 - 9,602,133 (+)NCBI
mRatBN7.2199,556,443 - 9,596,077 (+)NCBI
RefSeq Acc Id: XM_039097691   ⟹   XP_038953619
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,591 - 9,602,133 (+)NCBI
mRatBN7.2199,556,443 - 9,596,077 (+)NCBI
RefSeq Acc Id: XM_039097692   ⟹   XP_038953620
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,340 - 9,602,133 (+)NCBI
mRatBN7.2199,556,443 - 9,596,077 (+)NCBI
RefSeq Acc Id: XM_039097693   ⟹   XP_038953621
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,592 - 9,602,133 (+)NCBI
mRatBN7.2199,556,443 - 9,596,077 (+)NCBI
RefSeq Acc Id: XM_039097694   ⟹   XP_038953622
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,340 - 9,602,133 (+)NCBI
mRatBN7.2199,556,443 - 9,596,077 (+)NCBI
RefSeq Acc Id: XM_039097695   ⟹   XP_038953623
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,861 - 9,602,133 (+)NCBI
mRatBN7.2199,556,887 - 9,596,077 (+)NCBI
RefSeq Acc Id: XM_063277979   ⟹   XP_063134049
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,342 - 9,602,133 (+)NCBI
RefSeq Acc Id: XM_063277980   ⟹   XP_063134050
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,341 - 9,602,133 (+)NCBI
RefSeq Acc Id: XM_063277981   ⟹   XP_063134051
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,562,827 - 9,600,452 (+)NCBI
RefSeq Acc Id: NP_001100879   ⟸   NM_001107409
- UniProtKB: A6JY05 (UniProtKB/TrEMBL),   B4F7A9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016386   ⟸   ENSRNOT00000016386
RefSeq Acc Id: XP_038953619   ⟸   XM_039097691
- Peptide Label: isoform X2
- UniProtKB: B4F7A9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953618   ⟸   XM_039097690
- Peptide Label: isoform X1
- UniProtKB: B4F7A9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953620   ⟸   XM_039097692
- Peptide Label: isoform X3
- UniProtKB: B4F7A9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953621   ⟸   XM_039097693
- Peptide Label: isoform X4
- UniProtKB: B4F7A9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953622   ⟸   XM_039097694
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038953623   ⟸   XM_039097695
- Peptide Label: isoform X5
Ensembl Acc Id: ENSRNOP00000097267   ⟸   ENSRNOT00000107442
RefSeq Acc Id: XP_063134050   ⟸   XM_063277980
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063134049   ⟸   XM_063277979
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063134051   ⟸   XM_063277981
- Peptide Label: isoform X5
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B4F7A9-F1-model_v2 AlphaFold B4F7A9 1-350 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306882 AgrOrtholog
BioCyc Gene G2FUF-6533 BioCyc
Ensembl Genes ENSRNOG00000011933 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000016386.8 UniProtKB/TrEMBL
  ENSRNOT00000107442.1 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro CK2_alpha UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
KEGG Report rno:307641 UniProtKB/TrEMBL
NCBI Gene 307641 ENTREZGENE
PANTHER CASEIN KINASE II SUBUNIT ALPHA UniProtKB/TrEMBL
  PTHR24054 UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PhenoGen Csnk2a2 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011933 RatGTEx
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
UniProt A0A8I6AW60_RAT UniProtKB/TrEMBL
  A6JY05 ENTREZGENE, UniProtKB/TrEMBL
  B4F7A9 ENTREZGENE, UniProtKB/TrEMBL
  F7FH41_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-27 Csnk2a2  casein kinase 2 alpha 2  Csnk2a2  casein kinase 2, alpha prime polypeptide  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-03 Csnk2a2  casein kinase 2, alpha prime polypeptide  Csnk2a2_predicted  casein kinase II, alpha 2, polypeptide (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Csnk2a2_predicted  casein kinase II, alpha 2, polypeptide (predicted)      Symbol and Name status set to approved 70820 APPROVED