Bss8 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bss8 (Bone structure and strength QTL 8) Rattus norvegicus

Symbol: Bss8
Name: Bone structure and strength QTL 8
RGD ID: 1549847
Trait: lumbar vertebra strength trait   (VT:0010574)    
Measurement Type: vertebra ultimate force   (CMO:0001678)    
LOD Score: 4.0
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2191 - 31,963,836RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0191 - 32,379,055RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0191 - 32,364,000RGDRnor5.0
RGSC_v3.4191 - 32,421,352RGDRGSC3.4
RGSC_v3.1190 - 32,426,170RGD
Cross Type: Not Available
Strains Crossed: F344/NHsd LEW/NHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
bone disease  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
F344/NHsd  (IEA)
LEW/NHsd  (IEA)

References

References - curated
1. Alam I, etal., J Bone Miner Res 2005 Sep;20(9):1589-96. Epub 2005 May 23.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3094Nr3c2nuclear receptor subfamily 3, group C, member 2193071564831059885Rat
3838Prdx2peroxiredoxin 2192318092723186217Rat
2535Ednraendothelin receptor type A193023354030303727Rat
71091Bbs2Bardet-Biedl syndrome 2191090965310944998Rat
619945Nae1NEDD8 activating enzyme E1 subunit 119446015472145Rat
619966Adcy7adenylate cyclase 7191874087518798924Rat
2806Hmox1heme oxygenase 1191346628713474082Rat
2244Cacna1acalcium voltage-gated channel subunit alpha1 A192352074123819971Rat
3117Mt1metallothionein 1191082603210827048Rat
3541Rbl2RB transcriptional corepressor like 2191587685215923632Rat
619920Ddx39aDExD-box helicase 39A192441874324427422Rat
71001Dnaja2DnaJ heat shock protein family (Hsp40) member A2192149779221516904Rat
2944JunbJunB proto-oncogene, AP-1 transcription factor subunit192317626523178049Rat
69308Pkn1protein kinase N1192444213024470107Rat
619742Cdh11cadherin 111921484472305754Rat
3931Ucp1uncoupling protein 1192480878224816853Rat
69286Cdh8cadherin 81954940385901810Rat
3039Man2b1mannosidase, alpha, class 2B, member 1192305509223074398Rat
619924Ccl17C-C motif chemokine ligand 17191020231710203768Rat
3030Smad1SMAD family member 1192851313028573665Rat
3389Prkacaprotein kinase cAMP-activated catalytic subunit alpha192415508124178430Rat
69080Nfixnuclear factor I X192335538823450360Rat
69357RradRRAD, Ras related glycolysis inhibitor and calcium channel regulator19354184357424Rat
620186Phkbphosphorylase kinase regulatory subunit beta192101371921210672Rat
620449Siah1siah E3 ubiquitin protein ligase 1192037890820402512Rat
620288Calrcalreticulin192330852523313420Rat
628812Pdp2pyruvate dehydrogenase phosphatase catalytic subunit 219386408394068Rat
68338Gipc1GIPC PDZ domain containing family, member 1192447429124487083Rat
2887Il15interleukin 15192564001325706818Rat
621003Nacc1nucleus accumbens associated 1192346868823486528Rat
621664Zfp423zinc finger protein 423191911153819407371Rat
621316Mmp2matrix metallopeptidase 2191415465714182870Rat
620075Pou4f2POU class 4 homeobox 2192948668629490327Rat
620708Cklfchemokine-like factor19698097706570Rat
631372MAST1microtubule associated serine/threonine kinase 1192321641823244224Rat
628594Rasd2RASD family, member 2191359429113605016Rat
620458Cx3cl1C-X3-C motif chemokine ligand 1191022733710237826Rat
621252Mt3metallothionein 3191084875410850158Rat
628732Gnao1G protein subunit alpha o1191103487411192502Rat
628745Rln3relaxin 3192410740124109432Rat
621130Dync1li2dynein, cytoplasmic 1 light intermediate chain 219531783554670Rat
621478Pllpplasmolipin191031510410335892Rat
708353Ces2acarboxylesterase 2A19129428136480Rat
619898Itfg1integrin alpha FG-GAP repeat containing 1192121069721331285Rat
1303268Slc38a7solute carrier family 38, member 71992092039225472Rat
1304918Asf1banti-silencing function 1B histone chaperone192418102424195604Rat
3686Slc12a3solute carrier family 12 member 3191063064910679250Rat
1305179N4bp1Nedd4 binding protein 1192022281120273570Rat
621457Dnase2deoxyribonuclease 2, lysosomal192324466123247329Rat
620470Inpp4binositol polyphosphate-4-phosphatase type II B192592018926670085Rat
628617Adgrg1adhesion G protein-coupled receptor G1191000396310041122Rat
70896Ces1dcarboxylesterase 1D191387349013912035Rat
3434Ptger1prostaglandin E receptor 1192447025824473687Rat
619933Ccl22C-C motif chemokine ligand 22191025760210264373Rat
620818Herpud1homocysteine inducible ER protein with ubiquitin like domain 1191059841110609002Rat
620768Adgrl1adhesion G protein-coupled receptor L1192420240524244137Rat
621822Slc6a2solute carrier family 6 member 2191401029214055317Rat
621508Ces1ecarboxylesterase 1E191383315413869627Rat
621563Ces2ecarboxylesterase 2E19157447172822Rat
620376Tecrtrans-2,3-enoyl-CoA reductase192452670524568168Rat
1304725Dnajb1DnaJ heat shock protein family (Hsp40) member B1192452271724526458Rat
1304572Rnf150ring finger protein 150192500697825229273Rat
2571Ces1ccarboxylesterase 1C191392640113955527Rat
735128LOC288913similar to LEYDIG CELL TUMOR 10 KD PROTEIN192391496523919149Rat
621809Cngb1cyclic nucleotide gated channel subunit beta 11997265959791111Rat
1306317Sec61g-ps1Sec61 gamma subunit, pseudogene 1192303725023037626Rat
1307510Zfp330zinc finger protein 330192531365525324958Rat
1305121FtoFTO, alpha-ketoglutarate dependent dioxygenase191528489815692142Rat
1305559Adgrg5adhesion G protein-coupled receptor G5191007478710098640Rat
1307501Cmtm2aCKLF-like MARVEL transmembrane domain containing 2A19671719678839Rat
1305595Adgre5adhesion G protein-coupled receptor E5192439797224418648Rat
1308550Ndufb7NADH:ubiquinone oxidoreductase subunit B7192456824124572579Rat
1306368Nod2nucleotide-binding oligomerization domain containing 2191837972018422817Rat
1305801Mylk3myosin light chain kinase 3192168508521743587Rat
735100Abcc12ATP binding cassette subfamily C member 12192054929820621991Rat
1306616Mcm5minichromosome maintenance complex component 5191348303013504389Rat
1307002Fbxw9F-box and WD repeat domain containing 9192309053423097439Rat
1306751Rbmxl1RBMX like 1192940790229411519Rat
1306842Car7carbonic anhydrase 719429063438478Rat
1307598Yju2bYJU2 splicing factor homolog B192389458723906084Rat
1307248Rnaseh2aribonuclease H2, subunit A192318632523196045Rat
1305992Trmt1tRNA methyltransferase 1192345675623471581Rat
1304881Dcaf15DDB1 and CUL4 associated factor 15192405392524061277Rat
1307370Cdh5cadherin 519815415854478Rat
1307424Irx3iroquois homeobox 3191521188215215323Rat
1305029Il27rainterleukin 27 receptor subunit alpha192410969824121977Rat
1305377Best2bestrophin 2192314160223148351Rat
1307787Snx20sorting nexin 20191843593518445108Rat
1307789Mri1methylthioribose-1-phosphate isomerase 1192390733523913320Rat
1307433Psme3ip1proteasome activator subunit 3 interacting protein 1191040140010430059Rat
1306574Rfx1regulatory factor X1192406133624092044Rat
1306108Cc2d1acoiled-coil and C2 domain containing 1A192401189724026937Rat
1307753Podnl1podocan-like 1192402726124033965Rat
735198Tepptestis, prostate and placenta expressed1997132819722257Rat
1305606Otud4OTU deubiquitinase 4192823671328279815Rat
1305035Mmaametabolism of cobalamin associated A192861906028649319Rat
1306072Brme1break repair meiotic recombinase recruitment factor 1192399004924011774Rat
1311085Gab1GRB2-associated binding protein 1192713126227239236Rat
1311099Rpgrip1lRpgrip1-like191569218915785083Rat
1309279Tk2thymidine kinase 219708859731786Rat
1310171Hook2hook microtubule-tethering protein 2192315186923170139Rat
1308684Ccdc102acoiled-coil domain containing 102A191010254310118657Rat
1309916Sall1spalt-like transcription factor 1191800578218022705Rat
1308936Anapc10anaphase promoting complex subunit 10192815229928205552Rat
1308937Mmp15matrix metallopeptidase 151996634499684943Rat
1310400Terb1telomere repeat binding bouquet formation protein 119473720528069Rat
1308020Zswim4zinc finger, SWIM-type containing 4192392784523952970Rat
1308024Tom1target of myb1 membrane trafficking protein191340548213440384Rat
1560538Setd6SET domain containing 6, protein lysine methyltransferase1993433099350477Rat
1311551Amfrautocrine motility factor receptor191099670511032260Rat
1306882Csnk2a2casein kinase 2 alpha 21995564439596080Rat
1311860Scocshort coiled-coil protein192465965124689236Rat
1311867Syce2synaptonemal complex central element protein 2192326623623291265Rat
1311974Usp38ubiquitin specific peptidase 38192700604627037449Rat
1333116Olr1667olfactory receptor 1667192460201924602963Rat
727852Tmem184ctransmembrane protein 184C193034518330361275Rat
1333226Olr1666olfactory receptor 1666192183241321834841Rat
1311437Orc6origin recognition complex, subunit 6192175786721765638Rat
1311525Nup93nucleoporin 93191068421410788009Rat
1311529Tox3TOX high mobility group box family member 3191664833816757151Rat
1311638Cdh16cadherin 1619360824371008Rat
1310356Tnpo2transportin 2192309939823119696Rat
1305674Adgrg3adhesion G protein-coupled receptor G319997242510001118Rat
1309899Rad23aRAD23 homolog A, nucleotide excision repair protein192331356323320702Rat
1310262Misp3MISP family member 3192413999824142006Rat
1309891Brd7bromodomain containing 7191870879218737500Rat
1308763Cmtm3CKLF-like MARVEL transmembrane domain containing 319622563630721Rat
1308009Cnot1CCR4-NOT transcription complex, subunit 11992551909346574Rat
1307877Prss54serine protease 541994799959496838Rat
1305215Usb1U6 snRNA biogenesis phosphodiesterase 11996893139702306Rat
1308221Tbc1d9TBC1 domain family member 9192484216624951383Rat
1310084Dok4docking protein 4191014652010157187Rat
1308895Large1LARGE xylosyl- and glucuronyltransferase 1191160312912048930Rat
1309398Klf1Kruppel like factor 1192325062723253802Rat
1309249Gadd45gip1GADD45G interacting protein 1192332066223323211Rat
1305462Gpt2glutamic--pyruvic transaminase 2192152680021561314Rat
1306672Nanos3nanos C2HC-type zinc finger 3192397846523988933Rat
1308153Gins3GINS complex subunit 31994200859428621Rat
1308534Rtbdnretbindin192319750623205544Rat
1305301Abce1ATP binding cassette subfamily E member 1192820556628230489Rat
1305310Neto2neuropilin and tolloid like 2192134429921418182Rat
1306935Polr2cRNA polymerase II subunit C191015815310164935Rat
1308706RGD1308706similar to RIKEN cDNA 4921524J17192162639021653869Rat
1308267Heatr3HEAT repeat containing 3191889247718930502Rat
1306795Chd9chromodomain helicase DNA binding protein 9191594153516146220Rat
1309166Nlrc5NLR family, CARD domain containing 5191047763810581023Rat
1309587Tent4bterminal nucleotidyltransferase 4B191880761618868969Rat
1305766Nudt21nudix hydrolase 21191097480010993841Rat
1305466Lonp2lon peptidase 2, peroxisomal192040747520499030Rat
1308832Smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5192727191827304594Rat
1310314Farsaphenylalanyl-tRNA synthetase subunit alpha192329140923300985Rat
1305783Hmgxb4HMG-box containing 4191336474113403563Rat
1308847Rspry1ring finger and SPRY domain containing 1191035244910403015Rat
1308848Ogfod12-oxoglutarate and iron-dependent oxygenase domain containing 1191094877810974566Rat
1306947Wdr83WD repeat domain 83192307694823082569Rat
1308346CyldCYLD lysine 63 deubiquitinase191831063218373696Rat
1308491Nkd1NKD inhibitor of WNT signaling pathway 1191847634418549380Rat
1307906Get3guided entry of tail-anchored proteins factor 3, ATPase192313010923138196Rat
1308816Cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1191893263118947667Rat
1310572Mgat4dMGAT4 family, member D192474006824777012Rat
1308493Cfap20cilia and flagella associated protein 201996088519622562Rat
1306157Prmt9protein arginine methyltransferase 9193037634230414491Rat
1306198Zfp319zinc finger protein 3191997028279706806Rat
1308829Gcdhglutaryl-CoA dehydrogenase192326321523269689Rat
1307693Kifc3kinesin family member C31998252089920371Rat
1562701Frem3FRAS1 related extracellular matrix 3192730846927366771Rat
621593Ndrg4NDRG family member 41993514089387398Rat
1565666Cesl1carboxylesterase-like 1192267070923006329Rat
1359640LOC291863carboxylesterase-like192256068522592355Rat
1562813Cbln1cerebellin 1 precursor191960876319612572Rat
1561806LOC498933LOC498933192866905928704512Rat
1561937Lsm6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated192909825429112858Rat
1562003Bean1brain expressed, associated with NEDD4, 119739551786122Rat
1563412RGD1563412similar to death effector domain-containing1948606744961453Rat
1565763Ccdc113coiled-coil domain containing 1131994970009516917Rat
1560130Cmtm1CKLF-like MARVEL transmembrane domain containing 119651641661184Rat
1565601Drc7dynein regulatory complex subunit 71999434529961266Rat
1562660RGD1562660RGD1562660192250949722513925Rat
1564453LOC501233LRRGT00080192264851922653372Rat
1561919RGD1561919similar to ribosomal protein S18191310714513107646Rat
1311170AktipAKT interacting protein191586681115877123Rat
1549717Ces5acarboxylesterase 5A191146946911499007Rat
1560620Zfp827zinc finger protein 827192872056828887381Rat
1311256Katnb1katanin regulatory subunit B11999212169940853Rat
1359244Lyl1LYL1, basic helix-loop-helix family member192345214023455007Rat
1559772RGD1559772similar to Luc7 homolog (S. cerevisiae)-like191239281712393601Rat
1549737Ciapin1cytokine induced apoptosis inhibitor 1191017996310195511Rat
1564830Irx6iroquois homeobox 6191433044014336403Rat
1564058Wdr83osWD repeat domain 83 opposite strand192307537223076934Rat
1564685Polr2l-ps1polymerase (RNA) II (DNA directed) polypeptide L, pseudogene 11983355488335915Rat
1303326Dhpsdeoxyhypusine synthase192308245423086544Rat
1563840Rpl26-ps3ribosomal protein L26, pseudogene 31990252829025776Rat
1561471Arl2bpADP-ribosylation factor like GTPase 2 binding protein191033692110346555Rat
1359581Ier2immediate early response 2192349455123496075Rat
1585793LOC680996similar to ribosomal protein S15a192005394420054336Rat
1586041LOC498906similar to ATP-dependent RNA helicase DDX3X1953163905320886Rat
1587307LOC364984hypothetical pseudogene 2 on chromosome 19q11192541230925413479Rat
1587309LOC364956hypothetical LOC364956192007053220070891Rat
1587310Ybx1-ps6Y box protein 1 related, pseudogene 6191984957919851101Rat
1587313LOC364928similar to Aldose reductase (AR) (Aldehyde reductase)1923391252340055Rat
1583003LOC688904similar to 60S ribosomal protein L35192712109727121489Rat
1585802Ciao2bcytosolic iron-sulfur assembly component 2B19344194346068Rat
1585808LOC680981similar to ribosomal protein L19192003475320035336Rat
1582965LOC688942similar to family with sequence similarity 51, member A1 homolog1993893079399542Rat
1584830LOC679711similar to RIKEN cDNA 5031410I06192236565222370450Rat
1565518Irx5iroquois homeobox 5191463905214643911Rat
1587598Elmod2ELMO domain containing 2192478616624805626Rat
1587599LOC688580similar to reproductive homeobox 4B1959290965929678Rat
1564492RGD1564492similar to hypothetical protein, 2-6191368393913684509Rat
1583671Ces1acarboxylesterase 1A191395952913986370Rat
1587637LOC688542similar to carboxylesterase 5192851637772Rat
1565617RGD1565617similar to Ig variable region, light chain1930931743093807Rat
2722Got2glutamic-oxaloacetic transaminase 21991743049199995Rat
1564108HhipHedgehog-interacting protein192786368427952528Rat
1564126RGD1564126similar to basic transcription factor 31923658042366283Rat
1564580RGD1564580similar to ribosomal protein S10192450114524501984Rat
1584151LOC688815similar to prohibitin1986951278696208Rat
1582935Gypaglycophorin A192745031127465940Rat
1565500Mt4metallothionein 4191086381310865909Rat
1565098Cmtm4CKLF-like MARVEL transmembrane domain containing 419576203616109Rat
1565102RGD1565102similar to 40S ribosomal protein S15 (RIG protein)192664190526650112Rat
1564388Slc10a7solute carrier family 10, member 7192918314329407470Rat
1589596LOC501297hypothetical LOC50129719259275264071Rat
1592776Isxintestine-specific homeobox191321855213239754Rat
1593026LOC680301hypothetical protein LOC680301191626166116263204Rat
1588791LOC688497similar to 40S ribosomal protein S2192459595324599858Rat
1587348LOC307783similar to TGF beta-inducible nuclear protein 1 (L-name-related protein 42) (LNR42)193003515830035929Rat
1589777Ttc29tetratricopeptide repeat domain 29192953170729750635Rat
1589784Vps35VPS35 retromer complex component192176577121801620Rat
1593780LOC685478similar to Serine/threonine-protein phosphatase PP1-beta catalytic subunit (PP-1B)192298007122984653Rat
1591368Ces2jcarboxylesterase 2J19280009306152Rat
1591343LOC685670similar to intersex-like19334416335034Rat
1592309LOC689453hypothetical protein LOC68945319186434201097Rat
1590249Dand5DAN domain BMP antagonist family member 5192333091723340486Rat
1589990LOC688388similar to ribosomal protein S111928245332825006Rat
1592274LOC689488similar to AP-3 complex subunit sigma-1 (Adapter-related protein complex 3 sigma-1 subunit) (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma-3A-adaptin)192981927629820542Rat
1592207LOC690757similar to septin 7192203073022033259Rat
1588826Rps27a-ps6ribosomal protein S27a, pseudogene 6193091627930916833Rat
1588804LOC688484hypothetical protein LOC688484192458466824585542Rat
1587042LOC680841similar to muscle protein684191904060819041095Rat
1586039LOC498912similar to Alpha- and gamma-adaptin-binding protein p34191207684212078376Rat
1586040Coq9coenzyme Q9191016694810179976Rat
1583620Capns2calpain, small subunit 2191410433414105276Rat
1586036Cpne2copine 2191043427710472146Rat
1587786LOC685989hypothetical protein LOC685989192190971921937396Rat
1588853Rps2-ps7ribosomal protein S2, pseudogene 7192453262624533466Rat
1588859Arhgap10Rho GTPase activating protein 10193044857230710315Rat
1561236RGD1561236similar to Carboxylesterase 21982298115070Rat
1587646LOC688533similar to hexamthylene bis-acetamide inducible 21954030485420132Rat
1564093Trirtelomerase RNA component interacting RNase192312508323128502Rat
1585876LOC680913hypothetical protein LOC680913191948424819509632Rat
1586683LOC686013hypothetical protein LOC686013192414692124150983Rat
1585295LOC688712similar to ribosomal protein L22 like 1192542082225421388Rat
1596406LOC685291similar to spermatogenesis associated glutamate (E)-rich protein 4b192239534322439432Rat
1597608LOC686476similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (38 kDa BFA-dependent ADP-ribosylation substrate) (BARS-38)192835548328356270Rat
1596470LOC685226similar to spermatogenesis associated glutamate (E)-rich protein 4d192283534722839939Rat
1591847LOC679149similar to carboxylesterase 2 (intestine, liver)195998874359Rat
1592345Mt2Ametallothionein 2A191083200910832783Rat
1592634Gng14G protein subunit gamma 14192308672923090140Rat
1591794LOC680405similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)191653834216539830Rat
1597684LOC685199similar to RIKEN cDNA 5031410I0619247850253393Rat
1597757LOC685125similar to RIKEN cDNA 5031410I06192285219922922593Rat
1592643Clgncalmegin192469514024728542Rat
1642419Ces1fcarboxylesterase 1F191379662313822113Rat
2319732LOC100361640hypothetical LOC100361640191366235413666993Rat
2319922LOC100361545hypothetical LOC100361545191335810313359054Rat
2318841LOC100365541hypothetical LOC100365541192245731422458889Rat
2322909LOC100360036mitochondrial ribosomal protein S36-like192849490828495203Rat
2322504LOC100360247hypothetical LOC1003602471991411379147571Rat
2321096LOC100360964chaperonin containing Tcp1, subunit 3 (gamma)192014643420148027Rat
2321866LOC100360591guanine nucleotide-binding protein, beta-1 subunit-like191024818910249477Rat
2321146LOC100360913abhydrolase domain containing 10-like192005483620055779Rat
2323468LOC100359772hypothetical LOC1003597721935012893502736Rat
2323492LOC100359748zinc finger CCCH type, antiviral 1192234391522356408Rat
2323544Zfp791zinc finger protein 791192301841823033580Rat
2323602Palm3paralemmin 3192412198424126079Rat
2323655LOC100359539ribonucleotide reductase M2 polypeptide192387938323881961Rat
2325349Mir24-2microRNA 24-2192395468323954790Rat
2325361Mir181dmicroRNA 181d192398370623983788Rat
2325381Mir181cmicroRNA 181c192398352323983628Rat
2325395Mir23amicroRNA 23a192395499723955071Rat
2325569Mir138-2microRNA 138-2191067419310674274Rat
2325592Mir27amicroRNA 27a192395483123954917Rat
4888555Mir3550microRNA 3550192322864123228754Rat
2324604LOC100363129LRRGT00018-like192163229321650799Rat
2324816LOC100363073nucleophosmin 1-like192078548520786466Rat
2325051Lpcat2lysophosphatidylcholine acyltransferase 2191408838914152742Rat
6486004LOC100912606uncharacterized LOC100912606192414460924150482Rat
6491014LOC100911782nucleophosmin-like191833904218339497Rat
6495903LOC100910922cytosolic purine 5'-nucleotidase-like192841423828424767Rat
6499556LOC100910244pyruvate kinase isozymes M1/M2-like1925240702556120Rat
6499616LOC100910259liver carboxylesterase-like19752714898Rat
6504334Ces2carboxylesterase 2194864756116Rat
6500925LOC100909916trafficking protein particle complex subunit 2-like protein-like192217032722170897Rat
7489012Mir1199microRNA 1199192414057524140694Rat
7542010LOC102549475uncharacterized LOC102549475191700136617025361Rat
7505565LOC102557216uncharacterized LOC102557216191827991618287521Rat
7529350LOC102546689uncharacterized LOC1025466891948336604860873Rat
7508229LOC102553772uncharacterized LOC102553772191128253111292546Rat
7529921Samd1sterile alpha motif domain containing 1192415113624154475Rat
7497501LOC102555119uncharacterized LOC102555119191501392515018390Rat
7509687LOC102547315serine/threonine-protein phosphatase PP1-beta catalytic subunit-like192279295522795089Rat
7510031LOC102547837uncharacterized LOC1025478371976367577645014Rat
7532016LOC102549581uncharacterized LOC102549581191722091617225036Rat
7540032LOC102556139uncharacterized LOC102556139191338856413405676Rat
7646717LOC102551322uncharacterized LOC102551322191950545119550814Rat
7647470LOC102548009uncharacterized LOC1025480091976777877721435Rat
7613847LOC102557406carboxylesterase 1E-like192263212722637621Rat
7557873LOC102556295uncharacterized LOC1025562951913345211369187Rat
7558266LOC10254681260S ribosomal protein L17-like191541316715413687Rat
7636890LOC102548158uncharacterized LOC1025481581979258047929233Rat
7637652LOC102547741uncharacterized LOC102547741192035841420365813Rat
7639712LOC10255666060S ribosomal protein L29-like192457466424575452Rat
7642644LOC10254859340S ribosomal protein S11-like192167532621675840Rat
7610034LOC102552779uncharacterized LOC102552779193028704930345197Rat
7661148LOC102556484uncharacterized LOC102556484191530716315311101Rat
7610401LOC102553276uncharacterized LOC102553276193145524731487135Rat
7555437LOC102548468uncharacterized LOC1025484681992270829232895Rat
7615626LOC102548759uncharacterized LOC102548759192396500023971784Rat
7597669LOC102553444uncharacterized LOC102553444191786762617901672Rat
7544409LOC102552540uncharacterized LOC102552540192247128722475693Rat
7578796LOC102549584uncharacterized LOC102549584192805103528075585Rat
7546549LOC102551054zinc finger CCCH-type antiviral protein 1-like192280973622811770Rat
7549007LOC102549652uncharacterized LOC102549652192837776228385051Rat
7602258LOC102551515uncharacterized LOC102551515191978886119800730Rat
7552255LOC102547668uncharacterized LOC1025476681955459015567818Rat
7553468LOC102553339uncharacterized LOC102553339191060920410621955Rat
7690868LOC102550889uncharacterized LOC102550889191028260010294754Rat
7735713LOC102546476uncharacterized LOC1025464761934332233447789Rat
7707469LOC102550010uncharacterized LOC102550010192865588228704532Rat
7687446LOC102554842CKLF-like MARVEL transmembrane domain-containing protein 2B-like19640837651872Rat
7689102LOC102556364uncharacterized LOC1025563641914657241477048Rat
7690199LOC102554553uncharacterized LOC102554553192495274524958115Rat
7714102LOC102548349uncharacterized LOC102548349192154702121554142Rat
7714193LOC102554654uncharacterized LOC102554654191258259412592274Rat
7738559LOC102553576uncharacterized LOC102553576191794803918008876Rat
7696942LOC10255471460S ribosomal protein L13-like191199320111999084Rat
7670251LOC102555510C-terminal-binding protein 2-like19685448690418Rat
7700714LOC10255066860S ribosomal protein L21-like192945683829457305Rat
7720115LOC102555451uncharacterized LOC102555451192409259624100673Rat
7746684LOC102550225septin-7-like192229721722299537Rat
7678927LOC102553117uncharacterized LOC102553117191745682517471003Rat
7728552LOC102546551uncharacterized LOC102546551192341900023429171Rat
7680597LOC102554391uncharacterized LOC102554391192194104622072466Rat
7749912LOC102553609uncharacterized LOC102553609191098224110996806Rat
9145556LOC103694314SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like192612829226131416Rat
9151310LOC103694973uncharacterized LOC103694973192761240027629804Rat
9215808LOC103694288uncharacterized LOC103694288191344606713466195Rat
9351195LOC103694287uncharacterized LOC103694287191334029913342578Rat
9272283LOC103694302mitogen-activated protein kinase 4 pseudogene192181819721820544Rat
9277655LOC103694285uncharacterized LOC103694285191119310211361540Rat
9362841LOC103694278uncharacterized LOC1036942781913253141334522Rat
9299867LOC103694321uncharacterized LOC103694321193105760631130156Rat
9301627LOC103694298uncharacterized LOC103694298191770945517769586Rat
9444094LOC103694291small nuclear ribonucleoprotein Sm D3 pseudogene191239602612396454Rat
9415173LOC103694293FUN14 domain-containing protein 2 pseudogene191470626414706743Rat
10398753Crndecolorectal neoplasia differentially expressed191464388714653880Rat
11362355LOC108348901uncharacterized LOC108348901191650019716516868Rat
11371108LOC108353188uncharacterized LOC108353188191373787813771508Rat
11448560LOC108348888uncharacterized LOC1083488881911993591209839Rat
11448883LOC108348876U1 small nuclear ribonucleoprotein C pseudogene191595711915960185Rat
11448884Trnal-cag7transfer RNA leucine (anticodon CAG) 7191030598610306068Rat
11468427LOC108348220zinc finger CCCH-type antiviral protein 1 pseudogene192295988422963318Rat
11468429LOC108348925small nuclear ribonucleoprotein G pseudogene192821034428212718Rat
11469687LOC108353199serine/threonine-protein phosphatase PP1-beta catalytic subunit pseudogene192290367722904690Rat
11474432LOC108348974uncharacterized LOC108348974192528969425301168Rat
11358650LOC108348918uncharacterized LOC108348918192490969324925713Rat
11362058LOC108348893uncharacterized LOC108348893191090773910909865Rat
11459318LOC108353189uncharacterized LOC10835318919442225445917Rat
11438483LOC108348906uncharacterized LOC108348906191893444518941602Rat
11438506Trnas-aga11transfer RNA serine (anticodon AGA) 11191469978714699867Rat
11447015LOC108348337uncharacterized LOC108348337192218490522189682Rat
11428350LOC108348923uncharacterized LOC108348923192542649525436109Rat
11366551LOC108348983membrane-associated progesterone receptor component 1 pseudogene193051171630512578Rat
11452034LOC108348945uncharacterized LOC1083489451941769904202816Rat
11384271LOC108353207uncharacterized LOC108353207192300217723004908Rat
11375248LOC10834896660S ribosomal protein L29 pseudogene191985805419858524Rat
11410734LOC10834889160S ribosomal protein L36 pseudogene191054142010541840Rat
11410986LOC108348898uncharacterized LOC108348898191420786414223664Rat
11402022LOC10834888140S ribosomal protein S25 pseudogene192976874529769406Rat
11392595Trnal-cag8transfer RNA leucine (anticodon CAG) 8191030633910306421Rat
11478525LOC108348902uncharacterized LOC108348902191649266416500151Rat
11497700LOC108353202disks large homolog 5-like192293511022939810Rat
14398579Mir709microRNA mir-709192407280624072898Rat
41322043LOC120098577uncharacterized LOC120098577192892691528940920Rat
41086236LOC120098753U6 spliceosomal RNA19475063475169Rat
41086479LOC120093142uncharacterized LOC120093142191377200313777488Rat
41111973LOC120098514uncharacterized LOC120098514191755814117583832Rat
41112025LOC120098604uncharacterized LOC120098604192714050927149999Rat
41167744LOC120098738U4 spliceosomal RNA192914193029142070Rat
41276456LOC120098665uncharacterized LOC120098665192158988221626464Rat
41276882LOC120098496disks large homolog 5-like19269263276114Rat
41323099NEWGENE_40934091transfer RNA alanine (anticodon AGC)1963044146304495Rat
41139117LOC120098585uncharacterized LOC120098585192297852122980208Rat
41168099LOC120098654zinc finger CCCH-type antiviral protein 1-like192276965122771419Rat
41168625LOC120098599uncharacterized LOC120098599191837558018379594Rat
41323723LOC120098695small nucleolar RNA SNORA17191593431215934444Rat
41323917LOC120098702small nucleolar RNA SNORA17192126084921260963Rat
41141743LOC120098578zinc finger CCCH-type antiviral protein 1-like192299450022996011Rat
41170809LOC120098509uncharacterized LOC1200985091994689629479673Rat
41251642LOC120098544uncharacterized LOC120098544191418294614187957Rat
41116136LOC12009861840S ribosomal protein S20-like19733224736580Rat
41252508LOC120098653glutamine synthetase-like191986461719865783Rat
41281082LOC120098485uncharacterized LOC120098485192343034223432362Rat
41145335LOC120098670U6 spliceosomal RNA1978070477807152Rat
41388122LOC120098752U6 spliceosomal RNA192432201524322118Rat
41092908LOC120098504uncharacterized LOC1200985041977447337746666Rat
41093326LOC120098731U2 spliceosomal RNA1997919589792097Rat
41147714LOC120098560uncharacterized LOC120098560192420821024208735Rat
41210962LOC120098747U6 spliceosomal RNA192442848524428591Rat
41328720LOC12009864960S ribosomal protein L19-like1978319787834736Rat
41362713LOC120098597uncharacterized LOC120098597191423314514238604Rat
41389703LOC120098551uncharacterized LOC1200985511991616099168764Rat
41390278LOC120098600uncharacterized LOC1200986001955214715539514Rat
41148266LOC120098501uncharacterized LOC1200985011993640059368966Rat
41149928LOC120098550uncharacterized LOC1200985501991503589153158Rat
41187483LOC120098663uncharacterized LOC120098663192102015021023136Rat
41364357LOC120098562cytochrome c-like192449911024500701Rat
41391415LOC120098737small nucleolar RNA U3192215375522153962Rat
41391893LOC120098699small nucleolar RNA SNORA171934574633457591Rat
41097078LOC120098581uncharacterized LOC120098581192281719222885981Rat
41178000LOC120098561uncharacterized LOC120098561192444053724444983Rat
41343011LOC120098687small nucleolar RNA SNORA17193016270530162832Rat
41366286LOC120098701small nucleolar RNA SNORA17191735007517350206Rat
41366346LOC120098667U6 spliceosomal RNA19232281232387Rat
41392794LOC120098507igE-binding protein-like192238051822381798Rat
41099650LOC120098486uncharacterized LOC120098486192345521123456949Rat
41214423LOC120098690small nucleolar RNA SNORA17192088486820884995Rat
41215232LOC120098751U6 spliceosomal RNA192046621920466325Rat
41267296LOC120098680small nucleolar RNA SNORA461993144419314575Rat
41288257Thsd8thrombospondin type 1 domain containing 8192318639423188323Rat
41370279LOC120098651protein PBDC1-like191480144214807257Rat
41396011LOC120098505DNA-directed RNA polymerase II subunit GRINL1A-like192247816722483342Rat
41396074LOC120098563uncharacterized LOC120098563191759007517607147Rat
41157836LOC120098528uncharacterized LOC120098528192375617123765014Rat
41268452LOC120098533uncharacterized LOC120098533192080090120808057Rat
41346441LOC120098583uncharacterized LOC120098583192260705822626254Rat
41347740LOC120098570uncharacterized LOC120098570191053549010539241Rat
41070523LOC120098506serine/threonine-protein phosphatase PP1-beta catalytic subunit-like192245184522454193Rat
41160673Reeld1reeler domain containing 1192914189829159970Rat
41184329LOC120098489uncharacterized LOC120098489192392715923929994Rat
41292314LOC120093121serine/threonine-protein phosphatase PP1-beta catalytic subunit-like192184416921935356Rat
41373433LOC120098553uncharacterized LOC120098553191999827520000323Rat
41373891LOC120098495NEDD8-activating enzyme E1 regulatory subunit-like19202167229769Rat
41104662LOC120098652basic proline-rich protein-like191910796619110624Rat
41186779LOC120098529uncharacterized LOC120098529192368508923692190Rat
41374160LOC120098488uncharacterized LOC120098488191172141511729015Rat
41072776LOC120098703small nucleolar RNA SNORA17193082363230823744Rat
41163434LOC120098490uncharacterized LOC120098490192397238623975367Rat
41294602LOC120098697small nucleolar RNA SNORA17191302640613026533Rat
41402383LOC120098729U2 spliceosomal RNA192642919226429345Rat
41164894LOC120098645ice nucleation protein-like192138912621398346Rat
41273870NEWGENE_40934091transfer RNA alanine (anticodon AGC)191293679912936873Rat
41295950LOC120098510uncharacterized LOC1200985101994806329486017Rat
41320463LOC120098595uncharacterized LOC120098595192018968520195690Rat
41403740LOC120098694small nucleolar RNA SNORA17193192771031927841Rat
41085371LOC120098743U6 spliceosomal RNA1953080215308127Rat
41165301LOC120098642uncharacterized LOC120098642191951463519519525Rat
41166386LOC120098549thymosin beta-10-like1991531869153503Rat
41202626LOC120098559uncharacterized LOC120098559192417470824192464Rat
40944643LOC120098513uncharacterized LOC120098513191479042414801441Rat
40944694LOC12009856660S ribosomal protein L28-like192931088529316984Rat
40944742LOC120098590uncharacterized LOC120098590191418845714198236Rat
40945959LOC120098593uncharacterized LOC120098593191488138814897369Rat
40998408LOC120098541uncharacterized LOC120098541191941918819443773Rat
40972653LOC120098571uncharacterized LOC120098571191063197710658610Rat
40973828LOC120098602uncharacterized LOC120098602192717508827178216Rat
40952774LOC120098500uncharacterized LOC120098500191745648017457299Rat
41014607LOC120098554uncharacterized LOC120098554192519944825209488Rat
40956731LOC120098616uncharacterized LOC120098616191994267219950040Rat
40998689LOC120098572uncharacterized LOC120098572191149908711510648Rat
40983054LOC120098521uncharacterized LOC120098521191363755813645090Rat
40961626LOC120098728U2 spliceosomal RNA1919739921974128Rat
40937786LOC120098536uncharacterized LOC120098536191722538217232395Rat
40991131LOC120098633uncharacterized LOC120098633192821608428220114Rat
40966524LOC120098594uncharacterized LOC120098594193019709130198483Rat
41024705LOC120098503uncharacterized LOC120098503191869833118710027Rat
41049030LOC120098574uncharacterized LOC12009857419368791374454Rat
41050545LOC120098650dynactin subunit 6-like1979325817935763Rat
41078009LOC120098580DNA-directed RNA polymerase II subunit GRINL1A-like192287891022880774Rat
41078651LOC120098682small nucleolar RNA SNORA501993035659303685Rat
41316782LOC120098487uncharacterized LOC120098487192530601225313603Rat
41029298LOC120098568aldo-keto reductase family 1 member B1-like191021038010215027Rat
41079993LOC120098543uncharacterized LOC120098543191415268914168272Rat
41247345LOC120098733small nucleolar RNA U3191370264613702853Rat
41135159LOC120098685small nucleolar RNA SNORA321955526025552687Rat
41135224LOC120098678small nucleolar RNA SNORA5191040654810406684Rat
41254820LOC120098502uncharacterized LOC120098502191729079017291512Rat
41257688LOC120098647zinc finger CCCH-type antiviral protein 1-like192239588322397692Rat
41258260LOC120098671U6 spliceosomal RNA192178002821780125Rat
41221714LOC120098691small nucleolar RNA SNORA171987045878704719Rat
41267554LOC120098573uncharacterized LOC120098573191127295111280480Rat
41298061LOC120098569proteasome assembly chaperone 4-like191025311310253458Rat
41299646LOC120098613uncharacterized LOC120098613191233997412350282Rat
41314711LOC120098579zinc finger CCCH-type antiviral protein 1-like192278106322782360Rat
41314813LOC120098586uncharacterized LOC120098586192299752823000324Rat
41224445LOC120098692small nucleolar RNA SNORA17192013072520130852Rat
41334016NEWGENE_40934091transfer RNA alanine (anticodon AGC)192441526024415332Rat
41064138LOC120098557uncharacterized LOC120098557192410689824109997Rat
41235451LOC120098582disks large homolog 5-like192279999622804911Rat
41303095LOC120098515uncharacterized LOC120098515191457940014587212Rat
41064998NEWGENE_40926764transfer RNA proline (anticodon AGG)191792765617927730Rat
41237132LOC120098673U7 small nuclear RNA193004933630049401Rat
41041632LOC120098497uncharacterized LOC12009849719230203269086Rat
41238303LOC120098623uncharacterized LOC1200986231953229415329637Rat
41306472LOC120098531uncharacterized LOC120098531191977859619788806Rat
41239658LOC120098707small nucleolar RNA SNORD41192310667023106739Rat
41023185LOC120098681small nucleolar RNA SNORA441922117332211861Rat
41023938LOC120098523uncharacterized LOC120098523191659814016642551Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10715D19Arb1209191346786013468069Ratregion
10716D19Mit15170191346791713468079Ratregion
33802D19Mit2193191230572012305899Ratregion
33917D19Mit4257191560502315605265Ratregion
34312D19Mgh4100191032310210323180Ratregion
11471D19Mit9149192481604124816202Ratregion
11472D19Wox8111192481797824818103Ratregion
33597D19Mit13197192468134024681546Ratregion
33602D19Mit10183193108194131082124Ratregion
33698D19Mit12136191896158218961714Ratregion
33741D15Mit4201192605267726052794Ratregion
36165D19Rat13227192306926523069484Ratregion
35376D19Rat12178192570467125704884Ratregion
35567D19Rat181591964824186482577Ratregion
37042D19Rat191341974571157457249Ratregion
37668D19Rat42231192069611320696349Ratregion
37706D19Rat281981948552574855433Ratregion
37978D19Rat432051971521117152316Ratregion
35747D19Rat26168191970939619709566Ratregion
35775D19Rat27135191857978518579915Ratregion
35813D19Rat201351973976757397810Ratregion
35881D19Rat11128192968965629689776Ratregion
35959D19Rat15160191432468814324854Ratregion
39760D19Rat93239191954154819541787Ratregion
39824D19Rat82127191184212211842255Ratregion
38008D19Rat39249191935220919352458Ratregion
38032D19Rat101203191511459815114789Ratregion
38166D19Rat36223191078978010789999Ratregion
38242D19Rat41161192629651126296662Ratregion
38298D19Rat48179192702113127021310Ratregion
38302D19Rat52164191456772514567885Ratregion
40512D19Rat76157192457578424575943Ratregion
40648D19Rat77226192019759820197835Ratregion
38432D19Rat322131994637379463936Ratregion
38502D19Rat44141191514895115149088Ratregion
38534D19Rat47228191242990612430166Ratregion
38540D19Rat55210191484453914844749Ratregion
38622D19Rat56145191054695810547097Ratregion
40098D19Rat94173191406267514062848Ratregion
38808D19Rat54203192515071125150917Ratregion
39018D19Rat29206192932249029322676Ratregion
39074D19Rat31200191909853219098733Ratregion
39128D19Rat342461921879272188183Ratregion
39300D19Rat40200193010343730103633Ratregion
39466D19Rat73247192158502321585279Ratregion
39472D19Rat831471994330719433222Ratregion
39540D19Rat841311992038089203926Ratregion
42058D19Arb8265192481311624813393Ratregion
42058D19Arb8265192481311624813393Ratregion
41312D19Rat78309191442105914421354Ratregion
41386D19Rat851331970675747067707Ratregion
42426D19Rat1191151993968359396951Ratregion
42428D19Rat124210192905967329059881Ratregion
40846D19Rat79139191053299010533122Ratregion
40950D19Rat74130192444825124448377Ratregion
40998D19Rat75208192395622423956428Ratregion
41714D19Rat109126193006321930063337Ratregion
41722D19Rat972221994813769481592Ratregion
41746D19Rat981021969927126992814Ratregion
41768D19Rat96208192086060220860801Ratregion
43127D19Rat122213191517895315179140Ratregion
43128D19Rat115201191473348414733670Ratregion
43129D19Rat113238191694793416948168Ratregion
43130D19Rat112221192333737423337588Ratregion
43131D19Rat120200192618261526182815Ratregion
43132D19Rat110227192735660227356819Ratregion
45597D19Got2171191191708211917253Ratregion
45598D19Got1155191089850710898664Ratregion
45601D19Got11160191420491514205075Ratregion
45602D19Got13267191432458514324852Ratregion
45603D19Got6213191535323515353448Ratregion
45604D19Got7209191576412715764336Ratregion
45606D19Got14168192843871428438882Ratregion
45607D19Got16158192849407628494234Ratregion
45609D19Got17157192849407628494234Ratregion
45610D19Got15156193046225130462407Ratregion
45611D19Got18132193177567731775809Ratregion
60781D19Wox3124192753020727530329Ratregion
60745D19Rat111221192039314420393369Ratregion
60183D19Got19198192628389826284096Ratregion
60184D19Got20140192381524523815383Ratregion
60185D19Got21208192423328724233495Ratregion
60191D19Got8176191730959617309770Ratregion
61309D19Arb7280191082769110827970Ratregion
66638D19Mco1243192163368521633932Ratregion
67287D19Arb61031911225811122684Ratregion
1630110D19Got132152192350708023507232Ratregion
1630831D19Got107123192048831520488438Ratregion
1631148D19Got1011961934861463486342Ratregion
1632014D19Got102124191078894610789070Ratregion
1627722D19Ulb1158193106348431063642Ratregion
1628220D19Got129180191896154018961720Ratregion
1629249D19Got105158192524194525242103Ratregion
1638502D19Got1401771912814921281669Ratregion
1638597D19Got108199193068246030682659Ratregion
1641418D19Got1431251936981953698320Ratregion
1632729D19Got116141192940606029406201Ratregion
1633117D19Got10205191895738918957596Ratregion
1633237D19Got117181192334934323349535Ratregion
1639793D19Got103234191989019119890420Ratregion
1634948D19Got128245191242705712427302Ratregion
1634953D19Got1391901998290839829273Ratregion
1635357D19Got134144191950739919507540Ratregion
1635573D19Got104154191854798618548140Ratregion
1635800D19Got13326119997661997920Ratregion
1635840D19Got122210193108193031082139Ratregion
1636370D19Got1232051920499222050127Ratregion
1636909D19Got1191201987428258742945Ratregion
1637212D19Got106146192082946420829610Ratregion
1637985D19Got1312971948633394863636Ratregion
7206032Pou4f291192948771529487806Ratregion
7205930Ppp1cb130192298244722982577Ratregion
7205932Ppp1cb462192298221822982680Ratregion
5035871PMC26527P12061997580109758216Ratregion
5035891PMC293425P1731191789978017899940Ratregion
5035891PMC293425P1731191789962517899758Ratregion
5038778RH1273271821938160883816266Ratregion
5036095Cacna1a383192352875523529138Ratregion
7206610Irx31503191521380915215312Ratregion
7206660Klf1150192325294223253676Ratregion
5039292RH127623216191033545710335673Ratregion
5039296RH127625204192723874327238947Ratregion
5036468Ptger1148192447076924470917Ratregion
5039104RH127515201191955004219550243Ratregion
5036683AU048865212191607998716080201Ratregion
5035554NR3C2248193105040631050654Ratregion
5035625D21S191747191019814610198193Ratregion
5035657STS-F0399281191043452110434602Ratregion
5035691RH68394160191103495211035112Ratregion
5031278PMC124545P1320193105071331051033Ratregion
5033899RH140541121192815306228153183Ratregion
5033927RH1406431881999223029922714Ratregion
5025948RH13031321319739726739939Ratregion
5026004RH130539203191360413313604940Ratregion
5026030RH130639209191955869819558907Ratregion
5028665RH12592522319345814346037Ratregion
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5503454CDH8_19197911958892025889993Ratregion
5503861UniSTS:47291270191346939313470289Ratregion
5503883CES2151191392688213927033Ratregion
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5507309fc03d10.x10191647602116476122Ratregion
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5499991UniSTS:235975811991937389193819Ratregion
5499643MARC_6240-6241:992007189:1301191015784810158149Ratregion
5501379Klf11558192325081223252370Ratregion
5500456AA55556448192715710627157155Ratregion
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5500513RH135836400192406240724062807Ratregion
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5506593KATNB11461999255299926349Ratregion
5501822MARC_14423-14424:1010076472:1400192040090020401300Ratregion
5501830MARC_14789-14790:1010672522:112831999583529959635Ratregion
5501890MARC_16903-16904:1022861972:15071992958659296372Ratregion
5502188MARC_7999-8000:996688236:1190192307569223076455Ratregion
5502377RH1246471147192326906223270209Ratregion
5502255AI173355117192456743124567631Ratregion
Position Markers

Peak: (D19Rat32)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2199,463,737 - 9,463,936 (+)MAPPER
Rnor_6.0199,878,956 - 9,879,154NCBI
Rnor_5.0199,863,901 - 9,864,099UniSTS
RGSC_v3.4199,921,245 - 9,921,443UniSTS
RGSC_v3.4199,921,191 - 9,921,514RGD
RGSC_v3.1199,926,071 - 9,926,269RGD
Celera199,357,959 - 9,358,157UniSTS
RH 3.4 Map1984.9RGD
RH 3.4 Map1984.9UniSTS
RH 2.0 Map1984.5RGD
SHRSP x BN Map195.2799RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032318023069265Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
61328Eae8Experimental allergic encephalomyelitis QTL 84nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)192481604133061905Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)192481797839654489Rat
1354600Salc2Saline consumption QTL 29.910.001drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)192753020737947399Rat
1354607Gmadr1Adrenal mass QTL 15.83adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)192753020737947399Rat
1354633Bw28Body weight QTL 286.04body mass (VT:0001259)body weight (CMO:0000012)192753020737947399Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: only F2 females (595) were used of the 1190 F2 population 1549683
qtl_general lineage: Reciprocal crosses of F344 X LEW were performed to generate hybrid F1 rats, which were intercrossed to to create F2 offspring 1549683
qtl_general measurement method: Rats on a standard diet were killed at 6 months of age and L5 vertebrae were tested in three-point bending using a material testing machine (Alliance RT/5; MTS Systems Corp., Eden Prairie, MN, USA) 1549683
qtl_general software used: Force and energy calculations were performed using TestWorks version 4.06 software 1549683