Ift172 (intraflagellar transport 172) - Rat Genome Database

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Gene: Ift172 (intraflagellar transport 172) Rattus norvegicus
Analyze
Symbol: Ift172 (Ensembl: AABR07063281.1)
Name: intraflagellar transport 172
RGD ID: 620744
Description: Involved in negative regulation of transcription by RNA polymerase II. Located in nucleus. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 20; retinitis pigmentosa 71; and short-rib thoracic dysplasia 10 with or without polydactyly. Orthologous to human IFT172 (intraflagellar transport 172); PARTICIPATES IN Hedgehog signaling pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: intraflagellar transport 172 homolog; intraflagellar transport 172 homolog (Chlamydomonas); intraflagellar transport protein 172 homolog; selective LIM binding factor homolog; selective LIM binding factor, rat homolog; selective LIM-binding factor; Slb
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2625,081,933 - 25,121,271 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,081,980 - 25,120,860 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,382,814 - 25,422,109 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0625,698,704 - 25,738,001 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0625,178,064 - 25,217,359 (+)NCBIRnor_WKY
Rnor_6.0626,390,686 - 26,485,459 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0636,210,777 - 36,304,662 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera624,573,352 - 24,613,367 (+)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Identification of a conserved protein that interacts with specific LIM homeodomain transcription factors. Howard PW and Maurer RA, J Biol Chem 2000 May 5;275(18):13336-42.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11062270   PMID:14603322   PMID:15755804   PMID:16061793   PMID:18488998   PMID:18930042   PMID:19521792   PMID:21552265   PMID:21653639   PMID:21703454   PMID:22554696   PMID:23055941  
PMID:24140113   PMID:24339785   PMID:24596149   PMID:24769233   PMID:25443296   PMID:28778798  


Genomics

Comparative Map Data
Ift172
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2625,081,933 - 25,121,271 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,081,980 - 25,120,860 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,382,814 - 25,422,109 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0625,698,704 - 25,738,001 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0625,178,064 - 25,217,359 (+)NCBIRnor_WKY
Rnor_6.0626,390,686 - 26,485,459 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0636,210,777 - 36,304,662 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera624,573,352 - 24,613,367 (+)NCBICelera
Cytogenetic Map6q14NCBI
IFT172
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38227,444,377 - 27,489,743 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl227,444,377 - 27,489,805 (-)EnsemblGRCh38hg38GRCh38
GRCh37227,667,244 - 27,712,610 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36227,520,744 - 27,566,075 (-)NCBINCBI36Build 36hg18NCBI36
Build 34227,578,891 - 27,624,222NCBI
Celera227,513,414 - 27,558,746 (-)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef227,409,128 - 27,454,460 (-)NCBIHuRef
CHM1_1227,597,152 - 27,642,482 (-)NCBICHM1_1
T2T-CHM13v2.0227,486,730 - 27,532,099 (-)NCBIT2T-CHM13v2.0
Ift172
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39531,410,623 - 31,448,458 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl531,410,621 - 31,448,460 (-)EnsemblGRCm39 Ensembl
GRCm38531,253,279 - 31,291,391 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl531,253,277 - 31,291,116 (-)EnsemblGRCm38mm10GRCm38
MGSCv37531,555,652 - 31,593,487 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36531,529,860 - 31,567,695 (-)NCBIMGSCv36mm8
Celera528,732,431 - 28,770,403 (-)NCBICelera
Cytogenetic Map5B1NCBI
Ift172
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554699,418,609 - 9,455,026 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554699,418,599 - 9,455,026 (-)NCBIChiLan1.0ChiLan1.0
IFT172
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A27,536,534 - 27,580,406 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A27,536,534 - 27,580,406 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A27,448,139 - 27,492,302 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
IFT172
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11721,389,462 - 21,426,970 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1721,389,482 - 21,426,796 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1721,281,228 - 21,318,724 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01721,710,828 - 21,748,327 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1721,710,832 - 21,748,293 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11721,397,430 - 21,434,930 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01721,406,908 - 21,444,410 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01721,455,165 - 21,492,664 (-)NCBIUU_Cfam_GSD_1.0
Ift172
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629265,694,405 - 65,731,092 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364935,108,437 - 5,145,160 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049364935,108,437 - 5,145,160 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IFT172
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3111,683,669 - 111,718,970 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13111,683,674 - 111,718,504 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23118,754,392 - 118,789,234 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IFT172
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11480,130,436 - 80,171,259 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604531,982,836 - 32,026,287 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ift172
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247389,510,512 - 9,545,933 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247389,510,452 - 9,546,985 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ift172
69 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:69
Count of miRNA genes:64
Interacting mature miRNAs:69
Transcripts:ENSRNOT00000074263
Prediction methods:Microtar, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)61653614027261739Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat

Markers in Region
RH92034  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,120,541 - 25,120,804 (+)MAPPERmRatBN7.2
Rnor_6.0626,484,730 - 26,484,992NCBIRnor6.0
Rnor_5.0636,303,933 - 36,304,195UniSTSRnor5.0
Celera624,612,638 - 24,612,900UniSTS
RH131827  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,120,970 - 25,121,255 (+)MAPPERmRatBN7.2
Rnor_6.0626,485,159 - 26,485,443NCBIRnor6.0
Rnor_5.0636,304,362 - 36,304,646UniSTSRnor5.0
Celera624,613,067 - 24,613,351UniSTS
RH143087  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,084,133 - 25,084,250 (+)MAPPERmRatBN7.2
Rnor_6.0626,392,846 - 26,392,962NCBIRnor6.0
Rnor_5.0636,212,937 - 36,213,053UniSTSRnor5.0
Celera624,575,512 - 24,575,628UniSTS
RH 3.4 Map6120.5UniSTS
RH134643  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,120,271 - 25,120,763 (+)MAPPERmRatBN7.2
Rnor_6.0626,484,460 - 26,484,951NCBIRnor6.0
Rnor_5.0636,303,663 - 36,304,154UniSTSRnor5.0
Celera624,612,368 - 24,612,859UniSTS
RH 3.4 Map691.0UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000085424   ⟹   ENSRNOP00000072658
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,081,980 - 25,120,860 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000090342   ⟹   ENSRNOP00000070902
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,081,980 - 25,120,860 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000091528   ⟹   ENSRNOP00000069468
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,081,980 - 25,120,860 (+)Ensembl
RefSeq Acc Id: NM_053792   ⟹   NP_446244
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2625,081,974 - 25,121,271 (+)NCBI
Rnor_6.0626,390,686 - 26,485,459 (+)NCBI
Rnor_5.0636,210,777 - 36,304,662 (+)NCBI
Celera624,573,352 - 24,613,367 (+)RGD
Sequence:
RefSeq Acc Id: XM_039111607   ⟹   XP_038967535
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2625,081,933 - 25,120,863 (+)NCBI
RefSeq Acc Id: XM_039111608   ⟹   XP_038967536
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2625,081,963 - 25,120,863 (+)NCBI
RefSeq Acc Id: XM_039111609   ⟹   XP_038967537
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2625,087,605 - 25,120,863 (+)NCBI
RefSeq Acc Id: XM_039111610   ⟹   XP_038967538
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2625,096,437 - 25,120,863 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_446244   ⟸   NM_053792
- UniProtKB: A0A096MJL0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038967535   ⟸   XM_039111607
- Peptide Label: isoform X1
- UniProtKB: A0A096MJL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967536   ⟸   XM_039111608
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038967537   ⟸   XM_039111609
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038967538   ⟸   XM_039111610
- Peptide Label: isoform X4
RefSeq Acc Id: ENSRNOP00000070902   ⟸   ENSRNOT00000090342
RefSeq Acc Id: ENSRNOP00000072658   ⟸   ENSRNOT00000085424
RefSeq Acc Id: ENSRNOP00000069468   ⟸   ENSRNOT00000091528

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JVF8-F1-model_v2 AlphaFold A0A0G2JVF8 1-495 view protein structure
AF-Q9JKU3-F1-model_v2 AlphaFold Q9JKU3 1-1749 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620744 AgrOrtholog
BioCyc Gene G2FUF-38355 BioCyc
Ensembl Genes ENSRNOG00000057813 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000069468.2 UniProtKB/TrEMBL
  ENSRNOP00000070902.2 UniProtKB/TrEMBL
  ENSRNOP00000072658 ENTREZGENE
  ENSRNOP00000072658.2 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000085424 ENTREZGENE
  ENSRNOT00000085424.2 UniProtKB/TrEMBL
  ENSRNOT00000090342.2 UniProtKB/TrEMBL
  ENSRNOT00000091528.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.470 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:116475 UniProtKB/Swiss-Prot
NCBI Gene 116475 ENTREZGENE
PANTHER IFT140/172-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INTRAFLAGELLAR TRANSPORT PROTEIN 172 HOMOLOG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ift172 PhenoGen
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tricorn protease domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A096MJL0 ENTREZGENE, UniProtKB/TrEMBL
  A0A096MK45_RAT UniProtKB/TrEMBL
  A0A0G2JVF8_RAT UniProtKB/TrEMBL
  IF172_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-07-09 Ift172  intraflagellar transport 172  Ift172  intraflagellar transport 172 homolog (Chlamydomonas)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-25 Ift172  intraflagellar transport 172 homolog (Chlamydomonas)  Slb  selective LIM binding factor, rat homolog  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-08-07 Slb  selective LIM binding factor, rat homolog      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_domains contains seven WD40 repeats and a putative nuclear localization signal 633929
gene_expression highly expressed in testis and pituitary cells 633929