Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ift172 (intraflagellar transport 172) Rattus norvegicus
Analyze
Symbol: Ift172
Name: intraflagellar transport 172
Description: Exhibits transcription factor binding activity. Involved in negative regulation of transcription by RNA polymerase II. Localizes to the nucleus. Human ortholog(s) of this gene implicated in retinitis pigmentosa 71 and short-rib thoracic dysplasia 10 with or without polydactyly. Orthologous to human IFT172 (intraflagellar transport 172); PARTICIPATES IN Hedgehog signaling pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: intraflagellar transport 172 homolog; intraflagellar transport 172 homolog (Chlamydomonas); intraflagellar transport protein 172 homolog; selective LIM binding factor homolog; selective LIM binding factor, rat homolog; selective LIM-binding factor; Slb
Orthologs:
Homo sapiens (human) : IFT172 (intraflagellar transport 172)  HGNC  Alliance
Mus musculus (house mouse) : Ift172 (intraflagellar transport 172)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ift172 (intraflagellar transport 172)
Pan paniscus (bonobo/pygmy chimpanzee) : IFT172 (intraflagellar transport 172)
Canis lupus familiaris (dog) : IFT172 (intraflagellar transport 172)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ift172 (intraflagellar transport 172)
Sus scrofa (pig) : IFT172 (intraflagellar transport 172)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0626,390,686 - 26,485,459 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0636,210,777 - 36,304,662 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera624,573,352 - 24,613,367 (+)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ift172
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620744
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.