Gene: Atp5pf (ATP synthase peripheral stalk subunit F6) Rattus norvegicus
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Symbol: Atp5pf
Name: ATP synthase peripheral stalk subunit F6
Description: Contributes to ATPase activity; involved in several processes, including ATP metabolic process, negative regulation of icosanoid secretion, and positive regulation of blood pressure; localizes to the cell surface, extracellular space, and mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); used to study pulmonary hypertension; biomarker of pulmonary hypertension; orthologous to human ATP5PF (ATP synthase peripheral stalk subunit F6); PARTICIPATES IN forkhead class A signaling pathway; Alzheimer's disease pathway; Huntington's disease pathway; INTERACTS WITH ammonium chloride; bisphenol A; diclofenac.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6; ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6; ATP synthase-coupling factor 6, mitochondrial; Atp5j; ATPase subunit F6; coupling factor 6
Orthologs:
Homo sapiens (human) : ATP5PF (ATP synthase peripheral stalk subunit F6)  HGNC  Alliance
Mus musculus (house mouse) : Atp5j (ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp5pf (ATP synthase peripheral stalk subunit F6)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP5PF (ATP synthase peripheral stalk subunit F6)
Canis lupus familiaris (dog) : ATP5PF (ATP synthase peripheral stalk subunit F6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp5pf (ATP synthase peripheral stalk subunit F6)
Sus scrofa (pig) : ATP5PF (ATP synthase peripheral stalk subunit F6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01124,286,806 - 24,294,419 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01127,914,805 - 27,918,237 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41124,316,748 - 24,323,800 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11124,316,747 - 24,323,800 (-)NCBI
Celera1123,720,789 - 23,727,843 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp5pf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621376
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.