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ONTOLOGY REPORT - ANNOTATIONS

Term:face development
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Accession:GO:0060324 term browser browse the term
Definition:The biological process whose specific outcome is the progression of a face from an initial condition to its mature state. The face is the ventral division of the head.


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face development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1857891|MGI:1861722 (MGI:3700411|PMID:17184764) RGD PMID:17184764 MGI:3700411 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:107928 (MGI:3700411|PMID:17184764)		 Ensembl
RGD		 PMID:17184764 GO_REF:0000107 MGI:3700411 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3055492 (MGI:3789436|PMID:18443298) RGD PMID:18443298 MGI:3789436 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:97847 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:15300250) RGD PMID:15300250 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Ednra endothelin receptor type A involved_in ISO MGI:3773699 (MGI:3773578|PMID:18199583) RGD PMID:18199583 MGI:3773578 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4942413 (MGI:4943100|PMID:21377456) RGD PMID:21377456 MGI:4943100 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Hoxb3 homeo box B3 acts_upstream_of_or_within ISO (MGI:4949985|PMID:21320481) RGD PMID:21320481 MGI:4949985 NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107 		JBrowse link
G Itga4 integrin subunit alpha 4 acts_upstream_of_or_within ISO MGI:1857206 (MGI:70927|PMID:7539359) RGD PMID:7539359 MGI:70927 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1346867 (MGI:3832113|PMID:18952847)		 Ensembl
RGD		 PMID:18952847 GO_REF:0000107 MGI:3832113 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 acts_upstream_of_or_within ISO MGI:1346866 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO MGI:1346859 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3608879 (MGI:3789436|PMID:18443298) RGD PMID:18443298 MGI:3789436 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:88190 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr 4:148,679,534...148,740,265
Ensembl chr 4:148,679,530...148,740,317 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:97858 (MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:69060 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:97856 (MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:69060 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Sox3 SRY-box transcription factor 3 involved_in ISO (MGI:3765357|PMID:17728342) RGD PMID:17728342 MGI:3765357 NCBI chr  X:139,308,608...139,310,734
Ensembl chr  X:139,309,329...139,310,678 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:19918918) RGD PMID:19918918 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zfand5 zinc finger AN1-type containing 5 acts_upstream_of_or_within ISO MGI:3526860 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 1:218,765,735...218,776,118
Ensembl chr 1:218,766,614...218,775,843 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:3698161 (MGI:3697539|PMID:17127413) RGD PMID:17127413 MGI:3697539 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
face morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:21782149) RGD PMID:21782149 NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962 		JBrowse link
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO MGI:3526852 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433 		JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within ISO MGI:2179287 (MGI:2177999|PMID:11773073) RGD PMID:11773073 MGI:2177999 NCBI chr 5:22,603,879...22,814,107
Ensembl chr 5:22,603,486...22,813,876 		JBrowse link
G Cdk2ap1 cyclin-dependent kinase 2 associated protein 1 acts_upstream_of_or_within ISO MGI:3512185 (MGI:3837115|PMID:19229340) RGD PMID:19229340 MGI:3837115 NCBI chr12:32,249,783...32,258,483
Ensembl chr12:32,249,747...32,258,479 		JBrowse link
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO MGI:97009 (MGI:3710444|PMID:17440987) RGD PMID:17440987 MGI:3710444 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Crebbp CREB binding protein involved_in ISO (MGI:4421646|PMID:19822209) RGD PMID:19822209 MGI:4421646 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Crispld1 cysteine-rich secretory protein LCCL domain containing 1 involved_in ISO (PMID:21254358) RGD PMID:21254358 NCBI chr 5:1,267,347...1,314,926
Ensembl chr 5:1,274,647...1,314,926 		JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 involved_in ISO (PMID:21254358) RGD PMID:21254358 NCBI chr19:48,053,153...48,111,485
Ensembl chr19:48,053,287...48,110,465 		JBrowse link
G Csrnp1 cysteine and serine rich nuclear protein 1 acts_upstream_of_or_within ISO MGI:3526868 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 8:119,704,712...119,717,767
Ensembl chr 8:119,704,713...119,718,183 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (MGI:3722225|PMID:17699607) RGD PMID:17699607 MGI:3722225 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180474 (MGI:3611627|PMID:16330189)		 Ensembl
RGD		 PMID:16330189 GO_REF:0000107 MGI:3611627 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (MGI:4421646|PMID:19822209) RGD PMID:19822209 MGI:4421646 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Kat6a lysine acetyltransferase 6A acts_upstream_of_or_within ISO MGI:4418468|MGI:98493 (MGI:5442217|PMID:22921202) RGD PMID:22921202 MGI:5442217 NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1202879 (MGI:3722225|PMID:17699607) RGD PMID:17699607 MGI:3722225 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191|MGI:4415718 (MGI:4358010|PMID:19700620), (MGI:4413396|PMID:19653321) RGD PMID:19653321 PMID:19700620 MGI:4358010 MGI:4413396 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88467 (MGI:3710444|PMID:17440987)		 Ensembl
RGD		 PMID:17440987 GO_REF:0000107 MGI:3710444 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10742093), (PMID:11332647), (PMID:12651933)
MGI:1933766|MGI:97493 (MGI:3611627|PMID:16330189), (MGI:4453942|PMID:20123092)
(MGI:3688967|PMID:11369996)		 RGD PMID:10742093 PMID:11332647 PMID:11369996 PMID:12651933 PMID:16330189 More... MGI:3611627 MGI:3688967 MGI:4453942 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:15146186), (PMID:19242925) RGD PMID:15146186 PMID:19242925 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1862000 (MGI:3640733|PMID:16712836)		 Ensembl
RGD		 PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Pax9 paired box 9 acts_upstream_of_or_within ISO MGI:97168 (MGI:4453942|PMID:20123092) RGD PMID:20123092 MGI:4453942 NCBI chr 6:74,186,749...74,203,508
Ensembl chr 6:74,182,568...74,203,506 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1926728 (MGI:3696608|PMID:17143286)		 Ensembl
RGD		 PMID:17143286 GO_REF:0000107 MGI:3696608 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO MGI:3526857 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 1:185,427,982...185,479,157
Ensembl chr 1:185,428,048...185,479,156 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA		 MGI:4941929|MGI:5645931 (MGI:5522627|PMID:23913870), (MGI:5586584|PMID:25190059)
GO_REF:0000107		 RGD
Ensembl		 PMID:23913870 PMID:25190059 GO_REF:0000107 MGI:5522627 MGI:5586584 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISO (PMID:11704759) RGD PMID:11704759 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:20512159) RGD PMID:20512159 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
G Rras RAS related involved_in ISO (PMID:24705357) RGD PMID:24705357 NCBI chr 1:95,500,582...95,504,362
Ensembl chr 1:95,500,566...95,504,357 		JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within ISO MGI:3526869 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 2:152,127,171...152,888,587
Ensembl chr 2:152,126,953...152,888,585 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:3796269|PMID:18498113) RGD PMID:18498113 MGI:3796269 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO MGI:3526851 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr20:29,047,793...29,094,209
Ensembl chr20:29,047,796...29,094,084 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:1095997|PMID:9284043), (MGI:2176418|PMID:11731796) RGD PMID:9284043 PMID:11731796 MGI:1095997 MGI:2176418 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179191 (MGI:4822099|PMID:20501333)		 UniProt
RGD		 PMID:20501333 GO_REF:0000024 MGI:4822099 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:96770 (MGI:3722225|PMID:17699607) RGD PMID:17699607 MGI:3722225 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2176682 (MGI:1313057|PMID:9811866) RGD PMID:9811866 MGI:1313057 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO (MGI:3796269|PMID:18498113) RGD PMID:18498113 MGI:3796269 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:3796269|PMID:18498113) RGD PMID:18498113 MGI:3796269 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO
ISS		 (PMID:12651933)
GO_REF:0000024
(MGI:3796269|PMID:18498113)		 RGD
AgBase		 PMID:12651933 PMID:18498113 GO_REF:0000024 MGI:3796269 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO MGI:3526866 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327 		JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:3044412 (MGI:4939992|PMID:20691403), (MGI:4949824|PMID:20574024) RGD PMID:20574024 PMID:20691403 MGI:4939992 MGI:4949824 NCBI chr 9:92,374,740...92,419,222
Ensembl chr 9:92,374,574...92,419,222 		JBrowse link
G Zfp80 zinc finger protein 80 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:260,248,231...260,265,211
Ensembl chr 1:260,236,599...260,265,254 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19738
    developmental process 6867
      anatomical structure development 6387
        face development 62
          face morphogenesis 40
Path 2
Term Annotations click to browse term
  biological_process 19738
    developmental process 6867
      anatomical structure development 6387
        head development 948
          face development 62
            face morphogenesis 40
paths to the root