Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Basp1 (brain abundant, membrane attached signal protein 1) Rattus norvegicus
Analyze
Symbol: Basp1
Name: brain abundant, membrane attached signal protein 1
Description: Predicted to have protein domain specific binding activity; transcription corepressor activity; and transcription regulatory region DNA binding activity. Predicted to be involved in glomerular visceral epithelial cell differentiation and negative regulation of transcription, DNA-templated. Localizes to the cytoplasm. Predicted to colocalize with the COP9 signalosome. Orthologous to human BASP1 (brain abundant membrane attached signal protein 1); INTERACTS WITH (+)-schisandrin B; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 22 kDa neuronal tissue-enriched acidic protein; brain acid soluble protein 1; brain acidic membrane protein; hypothetical protein LOC100364588; LOC100364588; NAP22; neuronal axonal membrane protein NAP-22
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0277,586,424 - 77,632,626 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl277,586,424 - 77,632,628 (-)Ensembl
Rnor_5.0297,311,340 - 97,358,165 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4276,877,616 - 76,927,721 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1276,805,848 - 76,855,954 (-)NCBI
Celera271,538,327 - 71,584,897 (-)NCBICelera
Cytogenetic Map2q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Basp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621491
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.