Bp274 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Bp274 (Blood pressure QTL 274) Rattus norvegicus

Symbol: Bp274
Name: Blood pressure QTL 274
RGD ID: 1359034
Also known as: pBP1
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0275,687,495 - 96,556,760RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0295,410,090 - 116,297,798RGDRnor5.0
RGSC_v3.4275,806,326 - 96,482,076RGDRGSC3.4
RGSC_v3.1275,734,560 - 96,426,854RGD
Cross Type: Not Available
Strains Crossed: WKY.SHR-(D2Rat174-D2Rat28) 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (QTM)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
11445903LOC108350231uncharacterized LOC10835023127571089175711808Rat
9429209LOC103691486uncharacterized LOC10369148627571237975743591Rat
7523639LOC102554929uncharacterized LOC10255492927599649976004872Rat
1563445RGD1563445similar to glyceraldehyde-3-phosphate dehydrogenase27622567476226656Rat
9329744LOC103691487uncharacterized LOC10369148727639188176396195Rat
1589593LOC502512similar to 60S ribosomal protein L7a27640964176423866Rat
2321536Sirpdsignal-regulatory protein delta27669410776941002Rat
2321484LOC100360774signal-regulatory protein alpha-like27695503876962306Rat
1559887RGD1559887similar to Transducin-like enhancer protein 4 (Groucho-related protein 4) (Grg-4)27705771977112614Rat
7621135LOC102546663tyrosine-protein phosphatase non-receptor type substrate 1-like27727777577286844Rat
9082324LOC103691499signal-regulatory protein beta-1-like27729973977302572Rat
621491Basp1brain abundant, membrane attached signal protein 127758642477632626Rat
1566273RGD1566273similar to exo-alpha-sialidase (EC 3.2.1.18) - Trypanosoma cruzi27775599077772012Rat
11386721LOC108350173charged multivesicular body protein 5 pseudogene27777163977772609Rat
1589753LOC310177similar to RIKEN cDNA 0610040D2027778378877784626Rat
1307193Myo10myosin X27786839878072443Rat
9304689LOC103691488uncharacterized LOC10369148827796872877976188Rat
11403233LOC108349968uncharacterized LOC10834996827809281578096188Rat
9390936LOC103689968protein FAM134B27810335878257109Rat
11359058LOC10834996760S ribosomal protein L7a pseudogene27813403578138432Rat
2318290LOC100362397ubiquitin-conjugating enzyme E2L 3-like27821294278213944Rat
9452233LOC103690028zinc finger protein 62227826169978276942Rat
7667351LOC102546311histone H3.3-like27827345178275631Rat
6494071LOC100911298heterogeneous nuclear ribonucleoprotein M-like27828131778283487Rat
6492786LOC10091147060S ribosomal protein L9-like27838451078385086Rat
1565003Retreg1reticulophagy regulator 127839192178401569Rat
1309146Zfp622zinc finger protein 62227840731278421152Rat
9421618LOC103691489histone H3.3-like27841767378419853Rat
1589752LOC310182similar to heterogeneous nuclear ribonucleoprotein M27842553978427709Rat
1593219LOC365713similar to 60S ribosomal protein L927852928578529861Rat
1559945Marchf11membrane associated ring-CH-type finger 1127882505378926402Rat
1305813Fbxl7F-box and leucine-rich repeat protein 727906790779439987Rat
1595140LOC685308similar to Heat shock protein HSP 90-beta (HSP 84) (Tumor-specific transplantation 84 kDa antigen) (TSTA)27956880279571074Rat
619925AnkhANKH inorganic pyrophosphate transport regulator28013156380256948Rat
2324500OtulinOTU deubiquitinase with linear linkage specificity28026772480293204Rat
1563205OtulinlOTU deubiquitinase with linear linkage specificity like28038364280408672Rat
1308360Triotrio Rho guanine nucleotide exchange factor28047139880769313Rat
9431470LOC103691490uncharacterized LOC10369149028069699180712318Rat
9185104LOC103691500uncharacterized LOC10369150028078324480792403Rat
1595053LOC685395hypothetical protein LOC68539528083671480837319Rat
1589269LOC683212similar to keratin complex 1, acidic, gene 1828087826380879814Rat
11418901LOC10834997060S ribosomal protein L27 pseudogene28092006780921048Rat
1560828Dnah5dynein, axonemal, heavy chain 528094773081143997Rat
1560828Dnah5dynein, axonemal, heavy chain 528115906081337560Rat
11493112LOC108349969tubulin alpha-1C chain-like28131814081321598Rat
1593760LOC685499similar to MYST histone acetyltransferase 128156538081567407Rat
1593218LOC365720similar to BMP/retinoic acid-inducible neural-specific protein28162815981632045Rat
7603843LOC102551226uncharacterized LOC10255122628172254081739144Rat
7740519LOC102551357uncharacterized LOC10255135728200026582030519Rat
2322903LOC100360042ARP3 actin-related protein 3 homolog (yeast)-like28218230282183522Rat
1592059LOC361908similar to 40S ribosomal protein S1028227462582275183Rat
6488544LOC10091211140S ribosomal protein S19-like28234065082341155Rat
11519496LOC108350174endogenous retrovirus group K member 25 Pol protein-like28247397682475092Rat
7530586LOC102551810uncharacterized LOC10255181028286282782882446Rat
620734Ctnnd2catenin delta 228322724784094315Rat
7595026LOC102553378uncharacterized LOC10255337828361228883613687Rat
7671897LOC102553574uncharacterized LOC10255357428423991884242373Rat
620641Dapdeath-associated protein28427588484328998Rat
1564227Ankrd33bankyrin repeat domain 33B28436106184436912Rat
11505970LOC108349971uncharacterized LOC10834997128446621584483673Rat
1591367Ropn1lrhophilin associated tail protein 1-like28452042184531192Rat
7678070LOC102553736uncharacterized LOC10255373628453140384534742Rat
1565757Marchf6membrane associated ring-CH-type finger 628453354684608743Rat
1306952Cmblcarboxymethylenebutenolidase homolog28464508484666836Rat
735161Cct5chaperonin containing TCP1 subunit 528466757884678730Rat
1560629AtpsckmtATP synthase c subunit lysine N-methyltransferase28467889284694152Rat
2322522LOC100360228hypothetical LOC10036022828481804084819425Rat
620733Tas2r119taste receptor, type 2, member 11928530522585306232Rat
2323921LOC100362858hypothetical LOC10036285828531483985315170Rat
6502911LOC100909539uncharacterized LOC10090953928537414285377163Rat
1308650Sema5asemaphorin 5A28537731885808970Rat
9158335LOC103691501zinc finger protein 345-like28592692886463583Rat
1585655LOC683539similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2)28614065586140925Rat
11447466LOC108350175zinc finger protein 737-like28642569186435068Rat
6502425LOC100909688zinc finger protein 43-like28646872686559141Rat
6485043LOC100912995zinc finger protein 733-like28658575586588902Rat
6485085LOC100913005zinc finger protein 99-like28661557686902946Rat
11355185LOC108350176zinc finger protein 728 pseudogene28686824286869229Rat
2322273LOC100360380zinc finger protein 457-like28688080686922446Rat
11427226LOC108349972uncharacterized LOC10834997228691000386913443Rat
11457724LOC108349973zinc finger protein 728-like28695178986968928Rat
1559684Zfp458zinc finger protein 45828697112986980519Rat
628788Zfp455zinc finger protein 45528699677587011696Rat
1587849Rsl1regulator of sex limited protein 128701590487040788Rat
7564391LOC102548546zinc finger protein 709-like28708546187092882Rat
6501293LOC100909879tyrosine-protein phosphatase non-receptor type substrate 1-like28741842587419918Rat
1587814Sirpb2l1signal-regulatory protein beta 2-like 128752884787620311Rat
1587796LOC685979similar to Transducin-like enhancer protein 4 (Groucho-related protein 4) (Grg-4)28765712687668202Rat
1586682LOC686014similar to AP-2 complex subunit sigma-1 (Adapter-related protein complex 2 sigma-1 subunit) (Sigma-adaptin 3b) (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin ass...28767714287677583Rat
11418902LOC108349974uncharacterized LOC10834997428775422187782286Rat
1586670LOC686026similar to eukaryotic translation initiation factor 5A28795479287965583Rat
1563710LOC499565LRRGT0003828795736387970337Rat
2240Car2carbonic anhydrase 228809774088112868Rat
2241Ca3carbonic anhydrase 328812651988136063Rat
1309780Car1carbonic anhydrase 128818520488227486Rat
1560453Ca13carbonic anhydrase 1328828296188314254Rat
2320742LOC100361118hypothetical LOC10036111828831419888324356Rat
1565641Rbisribosomal biogenesis factor28833801888350785Rat
621357E2f5E2F transcription factor 528835076488366913Rat
628722Lrrcc1leucine rich repeat and coiled-coil centrosomal protein 128838479688414012Rat
1565475LOC361914similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228845379288553113Rat
1309208Slc7a12solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228855967788660449Rat
6498023LOC100910566solute carrier family 7 member 13-like28866835988669438Rat
11465292LOC108349975uncharacterized LOC10834997528869235788695245Rat
1589989LOC688389similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228874452788763968Rat
9148085LOC103691502U1 small nuclear ribonucleoprotein C pseudogene28903562889037495Rat
1305844RalylRALY RNA binding protein-like28903999089842784Rat
11380439LOC108349976eukaryotic translation initiation factor 1 pseudogene28934639189347397Rat
9412486LOC103691503RNA-binding Raly-like protein28949087589499635Rat
9470100LOC10369510660S ribosomal protein L34 pseudogene28967366789674975Rat
6496535LOC100910774uncharacterized LOC10091077428984295089844052Rat
1588876LOC688412similar to Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase 1)28996727989968449Rat
6496250LOC100910852uncharacterized LOC10091085229021121490251921Rat
6496250LOC100910852uncharacterized LOC10091085229045948590582294Rat
2324778LOC100363110thioredoxin-like 429056943390994443Rat
1593216LOC365729similar to N-terminal acetyltransferase complex ARD1 subunit homolog A29056985790571294Rat
9304207LOC103691505uncharacterized LOC10369150529060514490615226Rat
9176013LOC103691504uncharacterized LOC10369150429062185790638028Rat
1588803LOC688485similar to heat shock protein 229106567491067564Rat
1588790LOC688498similar to Transcription factor Spi-C (Pu.1-related factor) (Prf)29112583191148869Rat
3272Pcsk1proprotein convertase subtilisin/kexin type 129145016291497091Rat
7659767LOC102548697uncharacterized LOC10254869729149607591509908Rat
2319734LOC100361638hypothetical LOC10036163829207814692082457Rat
1359558tGap1GTPase activating protein testicular GAP129254941392625942Rat
7511798LOC102553273N-alpha-acetyltransferase 11-like29255889792559665Rat
2324725LOC100363165thioredoxin-like 429255966692559872Rat
9232686LOC103691510uncharacterized LOC10369151029275843592764588Rat
1334307Olr389-psolfactory receptor pseudogene 38929287452692875568Rat
2319570LOC100361704eukaryotic translation initiation factor 1A, Y-linked29293246592933590Rat
2319479LOC100361795von Hippel-Lindau binding protein 1-like29318528693185797Rat
7561027LOC102553210uncharacterized LOC10255321029335296693362431Rat
9349712LOC103691511uncharacterized LOC10369151129345967193495066Rat
620295Snx16sorting nexin 1629351879693541056Rat
1564543Chmp4ccharged multivesicular body protein 4C29357455493641497Rat
1309519Zfand1zinc finger AN1-type containing 129365689593666745Rat
1306036Slc10a5solute carrier family 10, member 529366996293671266Rat
69254Impa1inositol monophosphatase 129367520393696355Rat
1565000Fabp12fatty acid binding protein 1229371246893766665Rat
11418558LOC108349977uncharacterized LOC10834997729376094593766500Rat
69309Fabp4fatty acid binding protein 429379266693797267Rat
620285Fabp9fatty acid binding protein 929380350393807069Rat
1585218Pmp2peripheral myelin protein 229382750493831419Rat
7544216LOC102546353uncharacterized LOC10254635329384452893848324Rat
70997Fabp5fatty acid binding protein 529398166293985322Rat
7673112LOC102546437uncharacterized LOC10254643729400283894044098Rat
11387324LOC108349978uncharacterized LOC10834997829414536994196509Rat
620394Pag1phosphoprotein membrane anchor with glycosphingolipid microdomains 129426610494277680Rat
7606094LOC102546729uncharacterized LOC10254672929431142694316348Rat
7507131LOC102556687uncharacterized LOC10255668729434777294372089Rat
1563869Zfp704zinc finger protein 70429437705994559838Rat
9426501LOC103691512uncharacterized LOC10369151229446693794470068Rat
708377Zbtb10zinc finger and BTB domain containing 1029469293994730976Rat
11437210LOC108349979uncharacterized LOC10834997929492979794938468Rat
1306767Tpd52tumor protein D5229495973295041277Rat
7537942LOC102546934uncharacterized LOC10254693429500307095010185Rat
1597461Mrps28mitochondrial ribosomal protein S2829507757795080825Rat
1566022LOC499573LRRGT0005629508425495106157Rat
9437192LOC103695108cytochrome c, somatic pseudogene29510110695102018Rat
1596973LOC678711similar to tropomyosin 2 (beta) isoform 229519735395198228Rat
621403Hey1hes-related family bHLH transcription factor with YRPW motif 129532014795322701Rat
11404987LOC108349980uncharacterized LOC10834998029532343695329781Rat
1585007LOC294901hypothetical LOC29490129540647595406979Rat
68947Stmn2stathmin 229542425195471900Rat
11441417LOC108349981uncharacterized LOC10834998129566947295832885Rat
2321312LOC100360846proteasome subunit beta type 6-like29603196796033538Rat
11373688LOC108350177voltage-dependent anion-selective channel protein 1 pseudogene29608229296112313Rat
1593213LOC365740hypothetical LOC36574029614384596147001Rat
2322842LOC100363505hypothetical LOC10036350529631446296315268Rat
11367342LOC108350232uncharacterized LOC10835023229632176496325294Rat
11374486LOC108350233glyceraldehyde-3-phosphate dehydrogenase pseudogene29636073996361744Rat
2904Il7interleukin 729642788496474979Rat
1311970Zc2hc1azinc finger, C2HC-type containing 1A29648293896520202Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34190D2Mgh1915028564251785642672Ratregion
33620D2Mit618927846607578466260Ratregion
33620D2Mit618927832141078321595Ratregion
36093D2Rat2617729399531693995492Ratregion
37274D2Rat13524928901132789011585Ratregion
37474D2Rat27620928427065984270863Ratregion
37132D2Rat14412527882379778823927Ratregion
37664D2Rat16721527996964479969856Ratregion
37816D2Rat14521729263207292632278Ratregion
36693D2Rat7514228063195080632091Ratregion
34914D2Rat2317428922805789228238Ratregion
34914D2Rat2317427720259577202776Ratregion
35148D2Rat2713029655662296556760Ratregion
35643D2Rat2111327568749575687607Ratregion
39828D2Rat20423527790421877904438Ratregion
40478D2Rat27723728442413984424363Ratregion
38592D2Rat11321429375780693758029Ratregion
38726D2Rat16314629251259092512750Ratregion
39216D2Rat9521428439468884394897Ratregion
39370D2Rat21213828375490783755024Ratregion
39512D2Rat21013828318756483187711Ratregion
42288D2Rat33024229397079693971019Ratregion
42581D2Rat32412328405277784052877Ratregion
42582D2Rat32514328531832885318467Ratregion
42584D2Rat32724928615811386158367Ratregion
42585D2Rat32821028553621885536379Ratregion
42586D2Rat33221529634571296345912Ratregion
40844D2Rat21120128390879083908992Ratregion
41000D2Rat20314927762806877628212Ratregion
41038D2Rat21411929488246494882578Ratregion
41758D2Rat27220027860717978607374Ratregion
41788D2Rat27520828381960883819822Ratregion
43494D2Got3210527637626376376367Ratregion
43502D2Got3624427943388479434127Ratregion
43503D2Got3812727927617879276304Ratregion
43505D2Got3712927965275579652883Ratregion
43507D2Wox2819028169201581692198Ratregion
43508D2Got4628628527143685271721Ratregion
43510D2Got3322928403548084035708Ratregion
43512D2Got4119728397045283970646Ratregion
43513D2Got4019727598409075984286Ratregion
43516D2Got18615529399535093995504Ratregion
43517D2Got6815829397079693970953Ratregion
43518D2Got7314529396243493962578Ratregion
43519D2Got6415129524909595249244Ratregion
43521D2Got7018729595621895956404Ratregion
60320D2Got3413027766734877667477Ratregion
66651D2Mco1219428281848082818694Ratregion
66659D2Mco1714327589611275896315Ratregion
66661D2Mco1813928063195380632096Ratregion
67750D2Uwm3119728096499280965184Ratregion
1630515D2Ulb819928089097780891175Ratregion
1630647D2Got32624529506119695061425Ratregion
1631348D2Ulb1627427997567979975952Ratregion
1631772D2Uia1810529588533395885437Ratregion
1579021D2Chm17225028076201980762268Ratregion
1628349D2Wox4822429380479593805018Ratregion
1629907D2Ulb1821329594288095943092Ratregion
1638728D2Got32322729364274393642969Ratregion
1638728D2Got32322729364245393642969Ratregion
1640758D2Got32416128942436489424578Ratregion
1635087D2Ulb910829408974294089849Ratregion
1635810D2Got40426328711121187111473Ratregion
1636921D2Got32110727637626076376366Ratregion
1638455D2Got42716429654582096545983Ratregion
1633796D2Got38112028054679680546915Ratregion
1633981D2Cebr211029524774095247849Ratregion
1634704D2Got32511228884626788846378Ratregion
1634704D2Got32511228882203188822142Ratregion
7364905rs106982173029557100495571004Ratregion
7206294Spic60229114826691148867Ratregion
5035747D5S23179928409411284094210Ratregion
5038774RH12732519428038369780383889Ratregion
5036370Il716529647465896474822Ratregion
5039234RH12758919028812658388126765Ratregion
5039124RH12752619228432873384328924Ratregion
5036701AU04892010328990656189906663Ratregion
5036791AU04921720629146049691460701Ratregion
5036855AU04942318628011221980112404Ratregion
5035608D8S1385E11029542435295424461Ratregion
5033855RH14037116328047154080471702Ratregion
5028713A009S3514828898629988986446Ratregion
5031524AU04804523429260305292603411Ratregion
5031524AU04804523429260305292603280Ratregion
5029241RH14404912128049895080499070Ratregion
5032475D15Ertd600e20627807223578072440Ratregion
5034966AI01017218528435850884358692Ratregion
5032807RH13537120628430004684300251Ratregion
5033003RH13725025028809777888098027Ratregion
5033095RH13757517127789675377896923Ratregion
5025128RH12660820628026956680269771Ratregion
5027811RH948359029647232396472412Ratregion
5028007M5858911929145255291452670Ratregion
5025572RH12884116328466663084666792Ratregion
5030869BE12097015028358090983581058Ratregion
5025818RH12979721228835087188351082Ratregion
5055073RH14359012728058450080584626Ratregion
5053449RH14265514028026982280269961Ratregion
5057468AA85874821128984362189843831Ratregion
5055501RH14383811527840014178400255Ratregion
5055501RH14383811527825566878255782Ratregion
5058590BE10212818228367691083677091Ratregion
5055923RH14408112028690279286902911Ratregion
5055175RH14364914629369842493698569Ratregion
5056289RH14429214428018106480181207Ratregion
5058734AI54954711128762013887620248Ratregion
5058734AI54954711127694083376940943Ratregion
5058094BE10196218828371355483713739Ratregion
5058198BF38679819828356403283564229Ratregion
5055497RH14383527828074213280742409Ratregion
5052897RH14233715529428427494284428Ratregion
5050762RH13424418529372398393724167Ratregion
5053689RH14279411928047257080472688Ratregion
5049834RH13370819527906808779068280Ratregion
5051346AW06122414729507787695078022Ratregion
5050700RH13420818028646903886469217Ratregion
5053403RH14262810027633451176334610Ratregion
5051485AW54596612128889402288894138Ratregion
5051000RH13438020527807808978078293Ratregion
5040948RH12857521128409395484094164Ratregion
5043368RH12998618428822720588227388Ratregion
5041296RH12877520929398170893981916Ratregion
5043540RH13008419129517351095173700Ratregion
5045008RH13093021029647632596476534Ratregion
5045628RH13128719329366648693666678Ratregion
5041834RH12908519628629703486297231Ratregion
5046554RH13182021129647490196475111Ratregion
5047450RH13233518927810452578104713Ratregion
5047494RH13236018129526743195267611Ratregion
5048876RH13315721528469330284693516Ratregion
5045690RH13132318628847486788475052Ratregion
5046626RH13186220428904166989041872Ratregion
5047338RH13227019828689878286898979Ratregion
5039706RH12786019128629686986297056Ratregion
5039830RH12793120929372431793724525Ratregion
5040210RH12815318128047200280472182Ratregion
5039426RH12769921929285814492858362Ratregion
5039534RH12776118728453373484533920Ratregion
7191218D2Mit618927846607578466260Ratregion
7191218D2Mit618927832141078321595Ratregion
5042290RH12934921828812654988126760Ratregion
5043398RH13000318228012292580123106Ratregion
5040464RH12829819429369592393696116Ratregion
7193028Krt1816728087951980879685Ratregion
5043006RH12977516128466663184666791Ratregion
5041466RH12887318629379591293797189Ratregion
5075250RH13848616428047965080479813Ratregion
5074132RH13784015728038223080382386Ratregion
5076716RH13933712028442532884425447Ratregion
5077060RH13953618028047154080471719Ratregion
5076068RH13896017729648320096483376Ratregion
5075112RH13840518829382911993830619Ratregion
5079442RH14100020727778388677784433Ratregion
5079444RH14100119129468942594689615Ratregion
5076620RH13928122629542286295423087Ratregion
5077462RH13977018129648320096483380Ratregion
5078078RH14013122027778425077784469Ratregion
5080138RH14140620728580299785803203Ratregion
5079258RH14087521629473329494733509Ratregion
5079272RH14088518128692215286922332Ratregion
5079302RH14090319028466749384667682Ratregion
5071228RH13496121627670713576707350Ratregion
5070814RH13472118727763308477633270Ratregion
5074228RH13789515129437440994374559Ratregion
5073534RH13749221228408947684089687Ratregion
5073764RH13762522028427873884278957Ratregion
5074856RH13825817728013650780136683Ratregion
5074856RH13825817727975473479754910Ratregion
5071858RH13532519828156610981566306Ratregion
5061768AW5332909828811158088111677Ratregion
5063374BI30178121329322765093227862Ratregion
5066592AU04826611128841025788410371Ratregion
5067456AU04773229028347981683480105Ratregion
5067724AU04757420429584140195841604Ratregion
5068356AU04719616829498691594987082Ratregion
5068358AU04719414227996140979961550Ratregion
5070311RH12647724528025726980257513Ratregion
5062018AI45412618829542441395424600Ratregion
5062204BE10632215128066590980666059Ratregion
5062310BI28866720529436626694366470Ratregion
5065696BF40622711327777547877775590Ratregion
5062648BF40366913628014189580142030Ratregion
5062648BF40366913627975991579760050Ratregion
5062766AW53437915829469045894690615Ratregion
5064186BE11419015028840288988403038Ratregion
5060258AI11183420329433036594330567Ratregion
5062060BF39734724427923363079233873Ratregion
5063598BE10781515029532352795323676Ratregion
5065390BE11531416628051038080510545Ratregion
5062904AW52886115027892618878926337Ratregion
5066176AA92595115629504026095040415Ratregion
5061316BI29372820829455226594552472Ratregion
5064752BF40501121028436101484361224Ratregion
5066412AU04837220228627329886273499Ratregion
5084206AA89391616728810240688102572Ratregion
5086857AI10459419428469392584694118Ratregion
5082353BE11920815029145261991452768Ratregion
5082649BE11992917028057807380578242Ratregion
5086586BM38587017829469144094691617Ratregion
5082899BF39036218328024983480250016Ratregion
5089899AU04942915129470241994702569Ratregion
5083403BF39107018229448984194490022Ratregion
5083801AI41296618128436060284360782Ratregion
5089633AU04927121628100317481003390Ratregion
5090039AU04951428828390444483904731Ratregion
5090181AU04959910428028911980289222Ratregion
5081933BE11878420328903729789037499Ratregion
5088213AU04843429928101397881014276Ratregion
5080984RH14189618429366807093668253Ratregion
5085501BM39048619428701133187011524Ratregion
5084990AI00888620328835689788357099Ratregion
5081635BE11772118527921177479211958Ratregion
5083903AI23213011328874041888740530Ratregion
5502801MYO1013627806200478062139Ratregion
5504298D8S1388E9029542428195424370Ratregion
5504809ha2145028085014580850665Ratregion
5505128Krt1876328087879380879555Ratregion
5505128Krt1876328087857080879555Ratregion
5505899UniSTS:4960149128566415585664245Ratregion
5506125UniSTS:4984218328813677888136860Ratregion
5506789G4539624027773553277735771Ratregion
5507197UniSTS:22524619629378258693782781Ratregion
5506941G3282014828898629988986446Ratregion
5499775UniSTS:23463931029468942094689729Ratregion
5501305D19S41745428681539886815851Ratregion
Position Markers

Flank 1: (D2Rat21)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0275,687,495 - 75,687,607NCBI
Rnor_5.0295,410,090 - 95,410,202UniSTS
RGSC_v3.4275,806,327 - 75,806,439UniSTS
RGSC_v3.4275,806,326 - 75,806,439RGD
RGSC_v3.1275,734,560 - 75,734,672RGD
Celera270,524,335 - 70,524,442UniSTS
RH 3.4 Map2498.8UniSTS
RH 3.4 Map2498.8RGD
SHRSP x BN Map229.4498RGD
SHRSP x BN Map229.4498UniSTS
FHH x ACI Map234.3399RGD
Flank 2: (D2Rat27)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0296,556,622 - 96,556,760NCBI
Rnor_5.02116,297,660 - 116,297,798UniSTS
RGSC_v3.4296,481,750 - 96,482,076RGD
RGSC_v3.4296,481,754 - 96,481,892UniSTS
RGSC_v3.1296,426,716 - 96,426,854RGD
Celera289,901,157 - 89,901,295UniSTS
RH 3.4 Map2597.9UniSTS
RH 3.4 Map2597.9RGD
RH 2.0 Map2499.5RGD
SHRSP x BN Map236.5198RGD
FHH x ACI Map244.3099RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)23127638105149020Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)216679272245624402Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22328064775687607Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)223837491149614623Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22618609783819822Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226186097135654963Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226186097142053534Rat
12879841Cm87Cardiac mass QTL 870.026heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)227161361148295267Rat
12879842Cm88Cardiac mass QTL 880.042heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)227161361148295267Rat
12879843Am3Aortic mass QTL 30.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)227161361148295267Rat
12879844Kidm62Kidney mass QTL 620.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227161361148295267Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23127237976272379Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23408817591101903Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23513320280133202Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)236245223112175725Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240171834105089682Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916169852800Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916195645082Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243133606217498545Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243133606217498545Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243141290114164944Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243141290114164944Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243141290154583160Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight as a percentage of body weight (CMO:0000654)24314978885642672Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243149788198704485Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246537589217498710Rat
1354592Rf50Renal function QTL 503.5urine output (VT:0003620)timed urine volume (CMO:0000260)25443669875687607Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256244671217498710Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)25771560378466260Rat
6480225Gdil1Gastrointestinal dilation QTL 1enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)25834410075687607Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)260131410135646395Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)260325352106432915Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)260325352106432915Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)260325352147522851Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)260325686105059293Rat
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)261924251106924251Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828049217498710Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828236243550655Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)26886541480632096Rat
1581576Pur7Proteinuria QTL 70.0001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)26886541480632096Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)268865414169852800Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)26886645480631953Rat
1581578Cm49Cardiac mass QTL 494.90.01heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)268866454149614466Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)270132175115132175Rat
2317041Aia14Adjuvant induced arthritis QTL 143.29joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)271495404116495404Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)27568749596556760Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)27568749596556760Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)275687495221880419Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)27832141079969856Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)278321410105089682Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)diastolic blood pressure (CMO:0000005)278321410105089682Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)278321410158159410Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278321410217498710Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)280631950149614623Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)282574487127574487Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)283656855128656855Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)283754907237610852Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)283819608239166203Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)283819608243901375Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)284424139132130578Rat
2300165Bmd49Bone mineral density QTL 494.80.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)291664872136664872Rat
2300170Bmd45Bone mineral density QTL 4512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)291664872136664872Rat
2300185Bmd46Bone mineral density QTL 468.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)291664872136664872Rat
7207808Bmd89Bone mineral density QTL 894.1femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)291664872136664872Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)293995316169852800Rat
1598862Glom9Glomerulus QTL 93.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)295946719140946719Rat
1598863Cm65Cardiac mass QTL 652.3heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)295946719140946719Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_map QTL flanking region defined by comparison of multiple congenic and subcongenic strains 629618