Cia7 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cia7 (Collagen induced arthritis QTL 7) Rattus norvegicus

Symbol: Cia7
Name: Collagen induced arthritis QTL 7
RGD ID: 61438
Also known as: Type II Collagen induced arthritis QTL 7
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: joint inflammation composite score   (CMO:0000919)    
LOD Score: 4.6
P Value: 1.0E-4
Variance: 20.0
Inheritance Type: dominant
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2259,324,377 - 141,596,857RGD_MAPPER_PIPELINE
Rnor_6.0260,325,352 - 147,522,851RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0284,360,871 - 166,931,968RGDRnor5.0
RGSC_v3.4259,700,886 - 146,659,672RGDRGSC3.4
RGSC_v3.1259,629,119 - 146,609,712RGD
Cross Type: F2
Strains Crossed: BBDR/Rhw BN 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Cpb1 is a candidate Gene for Cia7

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BBDR/Rhw  (IEA)
BN  (IEA)

References

Related QTLs

Related QTL Description Reference
Cia10 interacts with RGD:61063
Cia26 interacts with RGD:1285224


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61814Pex2peroxisomal biogenesis factor 229825175698269185Rat
71081Cldn11claudin 112115823541115836846Rat
2322Cdh6cadherin 626310072363246618Rat
619958Pdzd2PDZ domain containing 226239974862520448Rat
2240Car2carbonic anhydrase 228809774088112868Rat
2241Ca3carbonic anhydrase 328812651988136063Rat
69254Impa1inositol monophosphatase 129367520393696355Rat
69309Fabp4fatty acid binding protein 429379266693797267Rat
70997Fabp5fatty acid binding protein 529398166293985322Rat
2120Anxa5annexin A52123162477123194730Rat
3349Pld1phospholipase D12113651967113849403Rat
619741Cdh10cadherin 1026941517469636849Rat
620047Il2interleukin 22123847150123851854Rat
3196Npr3natriuretic peptide receptor 326188394661950291Rat
3407Prlrprolactin receptor26013141060325686Rat
2391Cpb1carboxypeptidase B12105059293105089682Rat
68391Pde7aphosphodiesterase 7A2104042124104134101Rat
628788Zfp455zinc finger protein 45528699677587011696Rat
621021PkiacAMP-dependent protein kinase inhibitor alpha29659318596668222Rat
620283Foxo1forkhead box O12141451234141527016Rat
621226Golph3golgi phosphoprotein 326236075462388773Rat
631398Kcnmb2potassium calcium-activated channel subfamily M regulatory beta subunit 22118276298118585321Rat
620961Prkciprotein kinase C, iota2115941998116002550Rat
628722Lrrcc1leucine rich repeat and coiled-coil centrosomal protein 128838479688414012Rat
2390Cpa3carboxypeptidase A32105016798105047989Rat
2904Il7interleukin 729642788496474979Rat
621356Nudt6nudix hydrolase 62124134301124149824Rat
621357E2f5E2F transcription factor 528835076488366913Rat
2387Cpceruloplasmin2104744249104803034Rat
621397Ghsrgrowth hormone secretagogue receptor2113065953113071265Rat
621399SkilSKI-like proto-oncogene2115862932115891304Rat
621403Hey1hes-related family bHLH transcription factor with YRPW motif 129532014795322701Rat
727973Acad9acyl-CoA dehydrogenase family, member 92122782051122806166Rat
620916Pik3caphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha2118831350118861456Rat
620134Zmat3zinc finger, matrin type 32118715229118746109Rat
621582Sub1SUB1 regulator of transcription26201990262034704Rat
2609Fgf2fibroblast growth factor 22124081072124134133Rat
708407Pex5lperoxisomal biogenesis factor 5-like2119330330119405809Rat
621729Dnajc21DnaJ heat shock protein family (Hsp40) member C2126041944660446656Rat
621117Nlgn1neuroligin 12111057291111973681Rat
620505Crhcorticotropin releasing hormone2104459999104461863Rat
621059Ccna2cyclin A22123274727123282266Rat
621767Agxt2alanine-glyoxylate aminotransferase 226033766760379144Rat
2483Cyp7b1cytochrome P450 family 7 subfamily B member 12102701903102871257Rat
68947Stmn2stathmin 229542425195471900Rat
620295Snx16sorting nexin 1629351879693541056Rat
620734Ctnnd2catenin delta 228322724784094315Rat
1304917Arsearylsulfatase E2122876645122884673Rat
1304936Mtfr1mitochondrial fission regulator 12104005696104040914Rat
3048Amacralpha-methylacyl-CoA racemase26094927660961342Rat
735161Cct5chaperonin containing TCP1 subunit 528466757884678730Rat
628734Tnfsf10TNF superfamily member 102113008008113026899Rat
727802Terctelomerase RNA component2116432723116433110Rat
61973Trpc3transient receptor potential cation channel, subfamily C, member 32123329954123467574Rat
620733Tas2r119taste receptor, type 2, member 11928530522585306232Rat
620285Fabp9fatty acid binding protein 929380350393807069Rat
2542Egfepidermal growth factor26882061668895537Rat
621785Gyg1glycogenin 12104916734104958219Rat
620394Pag1phosphoprotein membrane anchor with glycosphingolipid microdomains 129426610494277680Rat
621276Trpc4transient receptor potential cation channel, subfamily C, member 42143433102143605757Rat
728380Qrfprpyroglutamylated RFamide peptide receptor2122891321122949241Rat
3705Slc2a2solute carrier family 2 member 22114413427114445418Rat
621460Mfn1mitofusin 12118929738118971689Rat
1305010C1qtnf3C1q and TNF related 326092016060942586Rat
1307509Larp1bLa ribonucleoprotein 1B2127845034127876793Rat
1307812Supt20hSPT20 homolog, SAGA complex component2143892609143925733Rat
68437Dclk1doublecortin-like kinase 12144646255144939389Rat
1305844RalylRALY RNA binding protein-like28903999089842784Rat
1304890Ufm1ubiquitin-fold modifier 12143096268143104412Rat
1306920Jade1jade family PHD finger 12128461147128514298Rat
71004Smad9SMAD family member 92143951725144002025Rat
708377Zbtb10zinc finger and BTB domain containing 1029469293994730976Rat
1305813Fbxl7F-box and leucine-rich repeat protein 727906790779439987Rat
1306036Slc10a5solute carrier family 10, member 529366996293671266Rat
1306044Usp13ubiquitin specific peptidase 132119197153119317507Rat
620641Dapdeath-associated protein28427588484328998Rat
621491Basp1brain abundant, membrane attached signal protein 127758642477632626Rat
3272Pcsk1proprotein convertase subtilisin/kexin type 129145016291497091Rat
1307323Adamts12ADAM metallopeptidase with thrombospondin type 1 motif, 1226103907261340687Rat
1306277Ccdc39coiled-coil domain containing 392120278605120367829Rat
1307747Actl6aactin-like 6A2119112776119128870Rat
1307595RGD1307595similar to RIKEN cDNA 1700018B242138194136138197442Rat
1306704RGD1306704hypothetical LOC2954832147010399147016261Rat
1306528Hspa4lheat shock protein family A (Hsp70) member 4 like2127625737127682864Rat
1307384Il21interleukin 212123965021123972356Rat
1310615Mccc1methylcrotonyl-CoA carboxylase subunit 12122550777122690540Rat
1308508Brix1biogenesis of ribosomes BRX126045054760461425Rat
1308524Ect2epithelial cell transforming 22112769385112831476Rat
1305900Spartspartin2144522382144548968Rat
1306690Slc45a2solute carrier family 45, member 226096667160999398Rat
1307193Myo10myosin X27786839878072443Rat
1305390Plk4polo-like kinase 42127686911127705518Rat
1309517Rpl22l1ribosomal protein L22 like 12115362799115364735Rat
1309519Zfand1zinc finger AN1-type containing 129365689593666745Rat
1306767Tpd52tumor protein D5229495973295041277Rat
1305870Pcdh18protocadherin 182138819957138833932Rat
1303283Cog6component of oligomeric golgi complex 62142197566142235054Rat
1307225Egfem1EGF-like and EMI domain containing 12116524965117153933Rat
1305909Ndufb5NADH:ubiquinone oxidoreductase subunit B52119139717119153753Rat
1311090Stoml3stomatin like 32142717281142727026Rat
1311104Nceh1neutral cholesterol ester hydrolase 12112868834112932622Rat
1560498Eif3i-ps1eukaryotic translation initiation factor 3, subunit I, pseudogene 12145936797145937828Rat
1309275Slc7a11solute carrier family 7 member 112139453774139528479Rat
1308862Sec62SEC62 homolog, preprotein translocation factor2116188736116225510Rat
1310984Naa15N(alpha)-acetyltransferase 15, NatA auxiliary subunit2140471437140534259Rat
1309146Zfp622zinc finger protein 62227840731278421152Rat
1309780Car1carbonic anhydrase 128818520488227486Rat
1311665Ankrd50ankyrin repeat domain 502125289071125323527Rat
1559887RGD1559887similar to Transducin-like enhancer protein 4 (Groucho-related protein 4) (Grg-4)27705771977112614Rat
1311550Rxfp3relaxin family peptide receptor 326100633761007767Rat
1308353Rab33bRAB33B, member RAS oncogene family2140541619140552220Rat
1308360Triotrio Rho guanine nucleotide exchange factor28047139880769313Rat
1307626Droshadrosha ribonuclease III26288726763000307Rat
1310997MecomMDS1 and EVI1 complex locus2117396084117993604Rat
1311890Zfrzinc finger RNA binding protein26215025162213048Rat
1311970Zc2hc1azinc finger, C2HC-type containing 1A29648293896520202Rat
1309031Hltfhelicase-like transcription factor2104854571104914338Rat
1560393Armc1armadillo repeat containing 12103926567103979607Rat
1310478Spata5spermatogenesis associated 52124149872124341138Rat
1308650Sema5asemaphorin 5A28537731885808970Rat
1560683RGD1560683similar to 40S ribosomal protein S212133607298133607513Rat
1309264Bbs7Bardet-Biedl syndrome 72123283402123322991Rat
1310639Ccna1cyclin A12144456689144503570Rat
1306169Exosc8exosome component 82143925643143932240Rat
1308900Alg5ALG5, dolichyl-phosphate beta-glucosyltransferase2143932242143946472Rat
1305234Ythdf3YTH N(6)-methyladenosine RNA binding protein 32100677388100711365Rat
1308177Maml3mastermind-like transcriptional coactivator 32140734138141276886Rat
1305451Bhlhe22basic helix-loop-helix family, member e222102685513102688624Rat
1305942Rai14retinoic acid induced 1426054608360684365Rat
1307888Exosc9exosome component 92123264679123275623Rat
1307889Mynnmyoneurin2116397154116414702Rat
1309403Proser1proline and serine rich 12142686724142706359Rat
1309293Spry1sprouty RTK signaling antagonist 12124400689124405331Rat
1307998Phc3polyhomeotic homolog 32116028735116103227Rat
1309208Slc7a12solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228855967788660449Rat
1306952Cmblcarboxymethylenebutenolidase homolog28464508484666836Rat
1310102Hnf4ghepatocyte nuclear factor 4, gamma2100225880100372710Rat
1306496Rad1RAD1 checkpoint DNA exonuclease26046151360469646Rat
1306502RGD1306502similar to hypothetical protein FLJ1119326287087162887048Rat
1308931Samd7sterile alpha motif domain containing 72116239812116269769Rat
1305430Cdh18cadherin 1827365140874693342Rat
1307100RGD1307100similar to RIKEN cDNA D630029K192123555742123766675Rat
1306943Trim55tripartite motif-containing 552104416972104459117Rat
1307531Mrpl47mitochondrial ribosomal protein L472119128311119139451Rat
1308343Cdh9cadherin 926693879667078897Rat
1309446Intuinturned planar cell polarity protein2127459089127521327Rat
1310132Mfsd8major facilitator superfamily domain containing 82127706618127784129Rat
1310548Hps3HPS3, biogenesis of lysosomal organelles complex 2 subunit 12104789423104832964Rat
1309652Tm4sf1transmembrane 4 L six family member 12147382866147392062Rat
1308804Pgrmc2progesterone receptor membrane component 22127986106128002005Rat
1305285Postnperiostin2143656820143688087Rat
1307902Mtmr12myotubularin related protein 1226223649762305995Rat
1310585Elf2E74 like ETS transcription factor 22140310374140399312Rat
1309668Dcun1d1defective in cullin neddylation 1 domain containing 12122476173122527153Rat
1306196Eif5a2eukaryotic translation initiation factor 5A22115336646115354203Rat
1310045Ttc14tetratricopeptide repeat domain 142120266883120277505Rat
1311733Fxr1FMR1 autosomal homolog 12120529716120570356Rat
1562486Dnajc5bDnaJ heat shock protein family (Hsp40) member C5 beta2104290726104382846Rat
1564928Ttc23ltetratricopeptide repeat domain 23-like26049231460538551Rat
1562936RGD1562936similar to Heat shock protein HSP 90-beta (HSP 84)27295968172963589Rat
2071Agtr1bangiotensin II receptor, type 1b2105149020105224335Rat
1561457Actrt3actin-related protein T32116416561116418521Rat
1563943RGD1563943similar to mcdc21 protein2147477397147480564Rat
1563710LOC499565LRRGT0003828795736387970337Rat
1565052Lrrc34leucine rich repeat containing 342116370013116391964Rat
1563109Tmem212transmembrane protein 2122113578614113616786Rat
1561499Lrrc31leucine rich repeat containing 312116299380116343089Rat
1564472Rexo1l1-ps1REX1, RNA exonuclease 1 homolog-like 1, pseudogene 12143830019143832825Rat
1563445RGD1563445similar to glyceraldehyde-3-phosphate dehydrogenase27622567476226656Rat
1565000Fabp12fatty acid binding protein 1229371246893766665Rat
1311218Mgst2microsomal glutathione S-transferase 22140708396140727381Rat
1560453Ca13carbonic anhydrase 1328828296188314254Rat
1565003Retreg1reticulophagy regulator 127839192178401569Rat
1566022LOC499573LRRGT0005629508425495106157Rat
1563987Abhd18abhydrolase domain containing 182127770588127828218Rat
1563869Zfp704zinc finger protein 70429437705994559838Rat
1560200Gpr160G protein-coupled receptor 1602116105110116162036Rat
1560220Dnajc19DnaJ heat shock protein family (Hsp40) member C192120503093120531782Rat
1563766LOC499542LRRGT0017826174958161757917Rat
1564227Ankrd33bankyrin repeat domain 33B28436106184436912Rat
1563726Spata16spermatogenesis associated 162112281326112659911Rat
1560053Tbl1xr1TBL1X receptor 12107221913107359229Rat
1563847RGD1563847similar to karyopherin (importin) alpha 22133880368133882115Rat
1565757Marchf6membrane associated ring-CH-type finger 628453354684608743Rat
1332726Olr1280olfactory receptor 12802115074344115075303Rat
1559684Zfp458zinc finger protein 45828697112986980519Rat
1334307Olr389-psolfactory receptor pseudogene 38929287452692875568Rat
1359321Gnb4G protein subunit beta 42118978965119007877Rat
1359508RGD1359508similar to protein C33A12.32128675786128738215Rat
1563205OtulinlOTU deubiquitinase with linear linkage specificity like28038364280408672Rat
1311673Fndc3bfibronectin type III domain containing 3B2113109949113415171Rat
1564125RGD1564125similar to Cln5 protein26660059566615026Rat
1560629AtpsckmtATP synthase c subunit lysine N-methyltransferase28467889284694152Rat
1564247RGD1564247similar to SUMO/sentrin specific protease 529769429797697653Rat
1359309Adad1adenosine deaminase domain containing 12123790798123848598Rat
628721Sclt1sodium channel and clathrin linker 12128523376128675668Rat
1563022Zfhx4zinc finger homeobox 429842356598610368Rat
1559967RGD1559967similar to M2-type pyruvate kinase2134178506134179766Rat
619925AnkhANKH inorganic pyrophosphate transport regulator28013156380256948Rat
1359533LOC365778similar to RIKEN cDNA 1700034I232127776103127778350Rat
1564291Fat4FAT atypical cadherin 42125751818125879398Rat
1560001LOC499544LRRGT0015426199174262018698Rat
1560177Lhfpl6LHFPL tetraspan subfamily member 62142262236142461980Rat
1359558tGap1GTPase activating protein testicular GAP129254941392625942Rat
1333741Olr1279olfactory receptor 12792115092263115093210Rat
1560081LOC499584LRRGT002022110306363110329642Rat
1311852Kcnmb3potassium calcium-activated channel subfamily M regulatory beta subunit 32118868225118882562Rat
1560828Dnah5dynein, axonemal, heavy chain 528115906081337560Rat
1560828Dnah5dynein, axonemal, heavy chain 528094773081143997Rat
1359174LOC365791similar to T-cell activation Rho GTPase-activating protein isoform b2137292879137342348Rat
1561906RGD1561906similar to RIKEN cDNA 4930430F0827381996073822243Rat
1565351Rfxapregulatory factor X-associated protein2144003453144007636Rat
1565422RGD1565422similar to 60S ribosomal protein L3527165212171755719Rat
1585689Zfp639zinc finger protein 6392118906479118917491Rat
1583573LOC681117similar to ribosomal protein L626916003469204472Rat
1585807LOC680982hypothetical protein LOC68098226636776166369428Rat
1583285Hspd1-ps25heat shock protein 1, pseudogene 2527549530575498884Rat
1586489Cetn4centrin 42124045092124048441Rat
1585655LOC683539similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2)28614065586140925Rat
1561709RGD1561709similar to ribosomal protein S182122732106122732790Rat
1565852LOC499541LRRGT0004526169178561712850Rat
1587796LOC685979similar to Transducin-like enhancer protein 4 (Groucho-related protein 4) (Grg-4)28765712687668202Rat
1564926LOC499607similar to GTPase activating protein testicular GAP12133075993133123187Rat
1587573LOC689807similar to ribosomal protein L18a2139315700139316768Rat
1562890RGD1562890RGD15628902104400402104404083Rat
1584592LOC682357similar to homolog of yeast ribosome biogenesis regulatory protein RRS12104677767104681233Rat
1561719Atp11bATPase phospholipid transporting 11B (putative)2122337757122445090Rat
1561608Bbs12Bardet-Biedl syndrome 122124048513124057026Rat
1564378RGD1564378similar to 60S ribosomal protein L23a2125253104125257745Rat
1565414Nhlrc3NHL repeat containing 32142672188142686593Rat
1564595Pramel3preferentially expressed antigen in melanoma-like 32102443276102455605Rat
1565811Pcdh10protocadherin 102136992355137017705Rat
1583489LOC682402hypothetical protein LOC6824022104996271105001713Rat
1561817TnikTRAF2 and NCK interacting kinase2113984599114391805Rat
1563562RGD1563562similar to GTPase activating protein testicular GAP12132238755132304243Rat
1565475LOC361914similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228845379288553113Rat
1566350Cdh12cadherin 1227131022872540063Rat
1562629Nbeaneurobeachin2145011648145513439Rat
1565641Rbisribosomal biogenesis factor28833801888350785Rat
1563340RGD1563340similar to ribosomal protein S242146952507146952929Rat
1566273RGD1566273similar to exo-alpha-sialidase (EC 3.2.1.18) - Trypanosoma cruzi27775599077772012Rat
1566012Frem2FRAS1 related extracellular matrix 22142747501142885604Rat
1565646Sox2SRY-box transcription factor 22121165137121167545Rat
1564543Chmp4ccharged multivesicular body protein 4C29357455493641497Rat
1566159RGD1566159similar to preferentially expressed antigen in melanoma-like 32102407173102422428Rat
1565989RGD1565989similar to FLJ10378 protein2127916157127948154Rat
1559945Marchf11membrane associated ring-CH-type finger 1127882505378926402Rat
1589753LOC310177similar to RIKEN cDNA 0610040D2027778378877784626Rat
1588592LOC294660similar to peroxiredoxin 12142969693142970366Rat
1588790LOC688498similar to Transcription factor Spi-C (Pu.1-related factor) (Prf)29112583191148869Rat
1586346Setd7SET domain containing 7, histone lysine methyltransferase2140576188140618405Rat
1592966LOC680363hypothetical protein LOC68036326147822161479356Rat
1589577Sohlh2spermatogenesis and oogenesis specific basic helix-loop-helix 22144591755144614065Rat
1593760LOC685499similar to MYST histone acetyltransferase 128156538081567407Rat
1586362Ndufc1NADH:ubiquinone oxidoreductase subunit C12140460749140464588Rat
1586369Mgarpmitochondria-localized glutamic acid-rich protein2140444963140453719Rat
1589984Mab21l1mab-21 like 12145174876145177265Rat
1591367Ropn1lrhophilin associated tail protein 1-like28452042184531192Rat
1587344Noctnocturnin2140286661140306869Rat
1587345LOC310385similar to heat shock protein 82133460745133462694Rat
1590821Dusp14l1dual specificity phosphatase 14-like 12140835793140837188Rat
1586190LOC294831similar to ubiquitin-conjugating enzyme E2R 227022468870343525Rat
1590830LOC365932similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)2146829995146830692Rat
1589989LOC688389similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228874452788763968Rat
1591091LOC689536similar to cyclin D binding myb-like transcription factor 12130505006130507171Rat
1587849Rsl1regulator of sex limited protein 128701590487040788Rat
1585218Pmp2peripheral myelin protein 229382750493831419Rat
1593170Ccdc169coiled-coil domain containing 1692144551382144581044Rat
1592323LOC689439similar to myc induced nuclear antigen2136827953136829821Rat
1589592LOC502522similar to mitochondrial ribosomal protein L542112937805112938362Rat
1589593LOC502512similar to 60S ribosomal protein L7a27640964176423866Rat
1590215LOC685753similar to peptidylprolyl isomerase D2120637313120638592Rat
1589422Med14-ps1mediator complex subunit 14, pseudogene 12105594070105611706Rat
1588803LOC688485similar to heat shock protein 229106567491067564Rat
1587056LOC680827similar to Mitogen-activated protein kinase 6 (Extracellular signal-regulated kinase 3) (ERK-3) (p55-MAPK)2108525465108611473Rat
1587814Sirpb2l1signal-regulatory protein beta 2-like 128752884787620311Rat
1586670LOC686026similar to eukaryotic translation initiation factor 5A28795479287965583Rat
1559517Pabpc4lpoly(A) binding protein, cytoplasmic 4-like2130656212130658202Rat
1359527Tars1threonyl-tRNA synthetase 126139463261414115Rat
1590660LOC680500similar to CCR4-NOT transcription complex, subunit 82104555623104557255Rat
1585492Ccdc144bcoiled-coil domain containing 144B2122702354122747848Rat
1585003LOC294985similar to 3-phosphoglycerate dehydrogenase2124761699124768754Rat
1585005LOC294909similar to Inosine-5-monophosphate dehydrogenase 1 (IMP dehydrogenase 1) (IMPDH-I) (IMPD 1)29879266598794481Rat
1585007LOC294901hypothetical LOC29490129540647595406979Rat
1588876LOC688412similar to Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase 1)28996727989968449Rat
1583237LOC685065similar to heat shock protein 82116295605116299029Rat
1582963LOC688944similar to eukaryotic translation initiation factor 4A, isoform 12126147704126148434Rat
1589949LOC689629similar to GTPase activating protein testicular GAP12132883598132969563Rat
1565147Naaladl2N-acetylated alpha-linked acidic dipeptidase-like 22109092931110424885Rat
1583267Gpx2-ps1glutathione peroxidase 2, pseudogene 12116263844116264654Rat
1583588LOC681102similar to synaptosomal-associated protein 23 isoform SNAP23B26830493468306489Rat
1589926LOC689652similar to prohibitin2132979721132990069Rat
1586682LOC686014similar to AP-2 complex subunit sigma-1 (Adapter-related protein complex 2 sigma-1 subunit) (Sigma-adaptin 3b) (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin ass...28767714287677583Rat
1589269LOC683212similar to keratin complex 1, acidic, gene 1828087826380879814Rat
1588275LOC679491hypothetical protein LOC6794912140805576140806314Rat
1593206LOC365784similar to Fructose-bisphosphate aldolase A (Muscle-type aldolase)2131485704131486986Rat
1593207LOC365777similar to D-3-phosphoglycerate dehydrogenase (3-PGDH)2126190906126192575Rat
1593209LOC365768similar to 60S ribosomal protein L72123428021123428831Rat
1593212LOC365742similar to testis expressed gene 229692357997028648Rat
1593213LOC365740hypothetical LOC36574029614384596147001Rat
1596195Slc25a31solute carrier family 25 member 312127538323127554276Rat
1593216LOC365729similar to N-terminal acetyltransferase complex ARD1 subunit homolog A29056985790571294Rat
1593218LOC365720similar to BMP/retinoic acid-inducible neural-specific protein28162815981632045Rat
1593219LOC365713similar to 60S ribosomal protein L927852928578529861Rat
1593220LOC365709similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin e127020335270204638Rat
1596656LOC682635similar to CG31855-PA27471190674714279Rat
1597355Sertm1serine-rich and transmembrane domain containing 12144303700144323509Rat
1595438LOC680186hypothetical protein LOC6801862101741331101742652Rat
1597461Mrps28mitochondrial ribosomal protein S2829507757795080825Rat
1595598LOC678817similar to GTPase activating protein testicular GAP12132491051132551249Rat
1596973LOC678711similar to tropomyosin 2 (beta) isoform 229519735395198228Rat
1593204LOC365790similar to heat shock protein 82137712190137714142Rat
1593205LOC365789similar to histone deacetylase 12138284493138285832Rat
1592058LOC361937similar to Galectin-92124537252124539068Rat
1592059LOC361908similar to 40S ribosomal protein S1028227462582275183Rat
1594163LOC680268hypothetical protein LOC68026826169462161694896Rat
1588992LOC685894similar to heterogeneous nuclear ribonucleoprotein A32121129239121130650Rat
1593483LOC689381similar to WD repeat domain 61 isoform a2135628973135630081Rat
1595140LOC685308similar to Heat shock protein HSP 90-beta (HSP 84) (Tumor-specific transplantation 84 kDa antigen) (TSTA)27956880279571074Rat
1595487LOC680137similar to tropomyosin 3, gamma isoform 12101137061101138421Rat
1594375Slc7a14solute carrier family 7, member 142115678344115788688Rat
1594376LOC499576similar to phosphoglycerate kinase 12103345400103347198Rat
1591779LOC680421similar to 60S ribosomal protein L132104267277104267940Rat
1595053LOC685395hypothetical protein LOC68539528083671480837319Rat
1598096Tceal6transcription elongation factor A (SII)-like 62102369895102371888Rat
1598157LOC679913similar to Chromobox protein homolog 3 (Heterochromatin protein 1 homolog gamma) (HP1 gamma) (Modifier 2 protein) (HECH)29793788497938425Rat
1598354LOC295112similar to heat shock protein 82107917502107919525Rat
1597905LOC682571similar to spindlin2109317280109321345Rat
2319734LOC100361638hypothetical LOC10036163829207814692082457Rat
2319355LOC100361820putative ARM-1 protein-like2139322209139323853Rat
2318290LOC100362397ubiquitin-conjugating enzyme E2L 3-like27821294278213944Rat
2318910LOC100362072hypothetical LOC1003620722142921192142921726Rat
2319479LOC100361795von Hippel-Lindau binding protein 1-like29318528693185797Rat
2319549LOC100361725rCG57360-like2139148461139149301Rat
2319570LOC100361704eukaryotic translation initiation factor 1A, Y-linked29293246592933590Rat
2321312LOC100360846proteasome subunit beta type 6-like29603196796033538Rat
2322140LOC100360416hypothetical LOC1003604162127106622127108221Rat
2322842LOC100363505hypothetical LOC10036350529631446296315268Rat
2320718LOC100361143ribosomal protein L30-like2102919226102919567Rat
2321484LOC100360774signal-regulatory protein alpha-like27695503876962306Rat
2321502LOC100360756EWSR1/NFATC2 fusion protein-like2136163785136182753Rat
2322874LOC100360072succinate dehydrogenase-like2104594113104594698Rat
2322903LOC100360042ARP3 actin-related protein 3 homolog (yeast)-like28218230282183522Rat
2322273LOC100360380zinc finger protein 457-like28688080686922446Rat
2322289LOC100360364hypothetical LOC1003603642106934819106936005Rat
2320742LOC100361118hypothetical LOC10036111828831419888324356Rat
2321536Sirpdsignal-regulatory protein delta27669410776941002Rat
2321558LOC100360700hypothetical LOC1003607002112013796112033122Rat
2322932LOC100360013ubiquitin-associated protein 226669848566722913Rat
2320862LOC10036109828S ribosomal protein L42, mitochondrial-like2100955014100955815Rat
2321697LOC100360660chromosome 13 open reading frame 1-like2134289954134290501Rat
2321698LOC100360659PARK2 co-regulated-like2137911688137912510Rat
2323100Zfp267zinc finger protein 2672122855036122873696Rat
2322522LOC100360228hypothetical LOC10036022828481804084819425Rat
2323202Lrriq4leucine-rich repeats and IQ motif containing 42116347125116372930Rat
2321897LOC100360560rCG41410-like2127530326127531489Rat
2321898LOC100360559ras-related nuclear protein-like2137080504137082285Rat
2323451LOC100359789hypothetical LOC1003597892122019319122020986Rat
2323466LOC100359774hypothetical LOC10035977426497695064977728Rat
2323519LOC100359721hypothetical LOC10035972126462757364630635Rat
2323618LOC100359576multifunctional protein ADE2-like2100096289100099785Rat
2323670LOC100359524arginine/serine-rich coiled-coil 22120049729120051050Rat
2324500OtulinOTU deubiquitinase with linear linkage specificity28026772480293204Rat
2325355Mir551bmicroRNA 551b2116867647116867744Rat
2323921LOC100362858hypothetical LOC10036285828531483985315170Rat
2325576Mir124-2microRNA 124-22102311603102311711Rat
2324713LOC100363177ferritin light chain 1-like26255615962557234Rat
2324725LOC100363165thioredoxin-like 429255966692559872Rat
2324778LOC100363110thioredoxin-like 429056943390994443Rat
6489815LOC100911952ubiquitin-conjugating enzyme E2 variant 1-like2128850346128851138Rat
6488544LOC10091211140S ribosomal protein S19-like28234065082341155Rat
6489504LOC10091203340S ribosomal protein S21-like2129513158129513373Rat
6485043LOC100912995zinc finger protein 733-like28658575586588902Rat
6488949LOC100912064prohibitin-like2129924665129925515Rat
6485085LOC100913005zinc finger protein 99-like28661557686902946Rat
6486316LOC100912576heterogeneous nuclear ribonucleoprotein F-like2134737869134748340Rat
6486316LOC100912576heterogeneous nuclear ribonucleoprotein F-like2133961474133982862Rat
6494071LOC100911298heterogeneous nuclear ribonucleoprotein M-like27828131778283487Rat
6492943LOC100911493mediator of RNA polymerase II transcription subunit 14-like2105404820105422454Rat
6491220LOC100911693eukaryotic translation initiation factor 4 gamma 1-like2105856110105866784Rat
6501927LOC100909721cyclin-dependent kinase 1-like2113481799113487416Rat
6495614LOC10091097660S ribosomal protein L24-like2116020955116025202Rat
6499243LOC100910294olfactory receptor 8D1-like2115303322115304251Rat
6502425LOC100909688zinc finger protein 43-like28646872686559141Rat
6496250LOC100910852uncharacterized LOC10091085229045948590582294Rat
6496250LOC100910852uncharacterized LOC10091085229021121490251921Rat
6499495LOC100910227olfactory receptor 149-like2115290243115291178Rat
6499628LOC100910260olfactory receptor 8D1-like2115296011115296937Rat
6502911LOC100909539uncharacterized LOC10090953928537414285377163Rat
6499729LOC100910162olfactory receptor 8D1-like2115238435115239364Rat
6499766LOC100910178pro-epidermal growth factor-like26882060568895943Rat
6496535LOC100910774uncharacterized LOC10091077428984295089844052Rat
6499944LOC100910199olfactory receptor 146-like2115272156115273088Rat
6499955LOC100910086olfactory receptor 149-like2115225356115226291Rat
6500144LOC100910112phosphoglycerate kinase 1-like2103184835103186633Rat
6500205LOC100910128olfactory receptor 8D1-like2115231124115232050Rat
6500436LOC100910051olfactory receptor 146-like2115207270115208202Rat
6500570LOC100909968olfactory receptor 8D1-like2115158504115159430Rat
6503741LOC100909470fragile X mental retardation syndrome-related protein 1-like2122174149122174778Rat
6504200LOC100909396uncharacterized LOC10090939626285024562852408Rat
6504224LOC100909397PRAME family member 17-like2121878619121898611Rat
6497753LOC100910626ras-related protein Rab-5C-like2103750638103751377Rat
6576126Trnak-cuutransfer RNA lysine (anticodon CUU)2141888434141888506Rat
6498023LOC100910566solute carrier family 7 member 13-like28866835988669438Rat
6501293LOC100909879tyrosine-protein phosphatase non-receptor type substrate 1-like28741842587419918Rat
6501432LOC100909896ras-related protein Rap-1A-like2115055917115056823Rat
7528166LOC102549888rho GTPase-activating protein 20-like2137147947137157012Rat
7515013LOC102555118uncharacterized LOC1025551182112717809112728526Rat
7521532LOC102549889uncharacterized LOC1025498892143638479143642590Rat
7523289LOC102547647uncharacterized LOC1025476472115928629115929281Rat
7523639LOC102554929uncharacterized LOC10255492927599649976004872Rat
7525014LOC102555872uncharacterized LOC1025558722132555048132557483Rat
7525762LOC102549474uncharacterized LOC1025494742105393742105398616Rat
7505957LOC102553625uncharacterized LOC10255362526963236169726367Rat
7507131LOC102556687uncharacterized LOC10255668729434777294372089Rat
7507353LOC102547680ribosome biogenesis protein NSA2 homolog2146046260146047108Rat
7530586LOC102551810uncharacterized LOC10255181028286282782882446Rat
7509898LOC102550104uncharacterized LOC1025501042137625006137640643Rat
7510030LOC10254676760S ribosomal protein L29-like2124290881124291413Rat
7510660LOC102553838ribosome biogenesis protein NSA2 homolog2128532054128533430Rat
7511798LOC102553273N-alpha-acetyltransferase 11-like29255889792559665Rat
7534470LOC102548481peptidyl-prolyl cis-trans isomerase D-like2104472196104475893Rat
7512608LOC102549579uncharacterized LOC1025495792136870873136992247Rat
7513228LOC102554364ubiquitin-conjugating enzyme E2 variant 1-like2128856384128857198Rat
7503607LOC10254829539S ribosomal protein L40, mitochondrial-like26047004360472523Rat
7503655LOC102556166surfeit locus protein 6-like2122862265122864624Rat
7516215LOC102555991uncharacterized LOC1025559912132577540132718088Rat
7516893LOC102553773uncharacterized LOC1025537732128380569128386369Rat
7537942LOC102546934uncharacterized LOC10254693429500307095010185Rat
7538134LOC102549153uncharacterized LOC1025491532119553217119627543Rat
7538180LOC102551187uncharacterized LOC1025511872107252394107254871Rat
7517624LOC102552833uncharacterized LOC1025528332139951755139959315Rat
7662155LOC102556442uncharacterized LOC10255644226443363964453223Rat
7631535LOC102549317H/ACA ribonucleoprotein complex subunit 2-like2142677682142678808Rat
7631924LOC102553085uncharacterized LOC1025530852122641859122650375Rat
7646821LOC102555509uncharacterized LOC1025555092113468086113473658Rat
7662910LOC102552232uncharacterized LOC10255223226645923066522564Rat
7662935LOC102553734uncharacterized LOC10255373426976306569809916Rat
7663391LOC102547111uncharacterized LOC1025471112142079409142164866Rat
7664166LOC102552778uncharacterized LOC1025527782145221431145223982Rat
7621135LOC102546663tyrosine-protein phosphatase non-receptor type substrate 1-like27727777577286844Rat
7666268LOC102555937uncharacterized LOC1025559372132583138132654268Rat
7623948LOC102549721uncharacterized LOC1025497212143311741143357703Rat
7655658LOC102547646uncharacterized LOC10254764626077919260783463Rat
7655727LOC102554147uncharacterized LOC10255414727302672573031439Rat
7656055LOC102555566uncharacterized LOC1025555662113592263113598593Rat
7641108LOC102554180ubiquitin-conjugating enzyme E2 variant 1-like2128843709128846527Rat
7595026LOC102553378uncharacterized LOC10255337828361228883613687Rat
7627512LOC102556203uncharacterized LOC1025562032114567828114569535Rat
7642297LOC102550446rho GTPase-activating protein 20-like2137363124137405118Rat
7608682LOC102547718uncharacterized LOC1025477182115929806115931551Rat
7659767LOC102548697uncharacterized LOC10254869729149607591509908Rat
7616854LOC102549945uncharacterized LOC1025499452143736055143740571Rat
7590540LOC102551358uncharacterized LOC1025513582108748894108752296Rat
7597556LOC102549015uncharacterized LOC1025490152118282723118289007Rat
7556623LOC102552069uncharacterized LOC1025520692122520921122529437Rat
7573616LOC102550593uncharacterized LOC1025505932127245777127293781Rat
7544216LOC102546353uncharacterized LOC10254635329384452893848324Rat
7544661LOC102547815uncharacterized LOC1025478152116162054116167061Rat
7544750LOC102551838uncharacterized LOC1025518382122291354122299600Rat
7556978LOC102555205uncharacterized LOC1025552052112744241112749202Rat
7545253LOC102552872uncharacterized LOC10255287226742307667434026Rat
7561027LOC102553210uncharacterized LOC10255321029335296693362431Rat
7548606LOC102554443uncharacterized LOC1025544432128956872128965184Rat
7602661LOC102550295uncharacterized LOC10255029529717718097200728Rat
7602709LOC102554113uncharacterized LOC1025541132128834060128835125Rat
7581938LOC102552324uncharacterized LOC1025523242144796935144809582Rat
7603843LOC102551226uncharacterized LOC10255122628172254081739144Rat
7564391LOC102548546zinc finger protein 709-like28708546187092882Rat
7606094LOC102546729uncharacterized LOC10254672929431142694316348Rat
7552390LOC102555450uncharacterized LOC1025554502112982322112983704Rat
7552769LOC102552193uncharacterized LOC1025521932115394494115413345Rat
7553727LOC102549944uncharacterized LOC1025499442125067026125086092Rat
7553768LOC102552503uncharacterized LOC1025525032139674968139685768Rat
7608249LOC102546847uncharacterized LOC1025468472141818785141832266Rat
7690977LOC102555656uncharacterized LOC1025556562132280407132336676Rat
7752279LOC102552912uncharacterized LOC1025529122140123519140138593Rat
7673112LOC102546437uncharacterized LOC10254643729400283894044098Rat
7678070LOC102553736uncharacterized LOC10255373628453140384534742Rat
7725390LOC102548736uncharacterized LOC1025487362118377528118393104Rat
7726710LOC102552834uncharacterized LOC1025528342145137593145146515Rat
7733168LOC102546477uncharacterized LOC1025464772119057359119059085Rat
7738496LOC102551935uncharacterized LOC1025519352122313349122319987Rat
7740519LOC102551357uncharacterized LOC10255135728200026582030519Rat
7667287LOC102552646uncharacterized LOC1025526462139708637139715452Rat
7667351LOC102546311histone H3.3-like27827345178275631Rat
7667725LOC102554526heterogeneous nuclear ribonucleoprotein A3-like27409123674092283Rat
7671897LOC102553574uncharacterized LOC10255357428423991884242373Rat
7672274LOC102550696uncharacterized LOC10255069629766292897680496Rat
7746293LOC102547038uncharacterized LOC1025470382141812335141829861Rat
7722217LOC102554994protein NYNRIN-like2128775663128779741Rat
7703555LOC102547004uncharacterized LOC1025470042124511346124537204Rat
7709305LOC102547848uncharacterized LOC1025478482147445138147450563Rat
9087741LOC103691485uncharacterized LOC10369148527044576070453754Rat
9087750LOC103691526uncharacterized LOC1036915262120340269120367845Rat
9132743LOC103691522telomeric repeat-binding factor 2-like2114565719114566600Rat
9092849LOC103691525uncharacterized LOC1036915252118885059118885881Rat
9212549LOC103691513uncharacterized LOC1036915132102305885102311282Rat
9174059LOC103691545keratin-associated protein 10-11-like2120422568120440856Rat
9098830LOC103691546basic proline-rich protein-like2127842970127856012Rat
9176013LOC103691504uncharacterized LOC10369150429062185790638028Rat
9101027LOC10369156360S ribosomal protein L31 pseudogene2138489364138489758Rat
9081782LOC103691531uncharacterized LOC1036915312124629217124637033Rat
9148085LOC103691502U1 small nuclear ribonucleoprotein C pseudogene28903562889037495Rat
9103824LOC103691523uncharacterized LOC1036915232116942260116961183Rat
9185104LOC103691500uncharacterized LOC10369150028078324480792403Rat
9153539LOC103691542la-related protein 1B-like2127878696127881293Rat
9191676LOC103691547histone H3-like2130844831130845223Rat
9158335LOC103691501zinc finger protein 345-like28592692886463583Rat
9112018LOC103691537uncharacterized LOC1036915372128401640128410475Rat
9117034LOC103691562radixin-like2134827663134854382Rat
9202401LOC103691527uncharacterized LOC1036915272121061909121217335Rat
9074613LOC103691524uncharacterized LOC1036915242118795190118796957Rat
9082324LOC103691499signal-regulatory protein beta-1-like27729973977302572Rat
9082962LOC103691558serine/threonine-protein kinase DCLK1-like2144646161144661705Rat
9126076LOC103691543la-related protein 1B-like2127914666127916237Rat
9210656LOC103691559uncharacterized LOC1036915592145127494145130929Rat
9086576LOC103691528uncharacterized LOC1036915282121345496121390514Rat
9349712LOC103691511uncharacterized LOC10369151129345967193495066Rat
9349950LOC103691553uncharacterized LOC1036915532140468950140471333Rat
9307829LOC10369153560S ribosomal protein L34 pseudogene2127663009127663675Rat
9271705LOC103691515uncharacterized LOC1036915152104217153104230672Rat
9311256LOC103691536la-related protein 1B-like2127884724127886528Rat
9313899LOC103691534myoneurin-like2127529491127529897Rat
9318917LOC103691538uncharacterized LOC1036915382128892241128899503Rat
9367825LOC103691554uncharacterized LOC1036915542140952552140954564Rat
9368178LOC103691552uncharacterized LOC1036915522139944455139945600Rat
9232686LOC103691510uncharacterized LOC10369151029275843592764588Rat
9233673LOC103691530THUMP domain-containing protein 1-like2123684846123689222Rat
9384455LOC103691533uncharacterized LOC1036915332125400460125428494Rat
9323704LOC103691484putative hydrolase RBBP9 pseudogene26946220669464200Rat
9325302LOC103691555uncharacterized LOC1036915552141445106141450847Rat
9242295LOC103691551uncharacterized LOC1036915512139415342139418396Rat
9328325LOC103690673vomeronasal type-2 receptor 116-like2122106860122118565Rat
9387191LOC103691483uncharacterized LOC10369148326073552160743685Rat
9245979LOC103695116serine/arginine-rich splicing factor 3 pseudogene2127220857127221392Rat
9251158LOC103691517uncharacterized LOC1036915172107055859107058612Rat
9251686LOC103691539uncharacterized LOC1036915392132348181132355303Rat
9256846LOC103691516uncharacterized LOC1036915162105272805105277986Rat
9362373LOC103695100uncharacterized LOC10369510026309465463108200Rat
9303217LOC103691520U1 small nuclear ribonucleoprotein C pseudogene2113047448113047879Rat
9303218Rfxapl1regulatory factor X-associated protein-like 12144213414144217637Rat
9304207LOC103691505uncharacterized LOC10369150529060514490615226Rat
9304689LOC103691488uncharacterized LOC10369148827796872877976188Rat
9372491LOC103691548Golgi apparatus membrane protein TVP23 homolog B pseudogene2132727693132729342Rat
9266108LOC103691514ras-related protein Rab-5C pseudogene2104170380104171271Rat
9421618LOC103691489histone H3.3-like27841767378419853Rat
9329744LOC103691487uncharacterized LOC10369148727639188176396195Rat
9426501LOC103691512uncharacterized LOC10369151229446693794470068Rat
9389439LOC103691550uncharacterized LOC1036915502139370093139392616Rat
9429209LOC103691486uncharacterized LOC10369148627571237975743591Rat
9470100LOC10369510660S ribosomal protein L34 pseudogene28967366789674975Rat
9431470LOC103691490uncharacterized LOC10369149028069699180712318Rat
9437192LOC103695108cytochrome c, somatic pseudogene29510110695102018Rat
9437635LOC103691564uncharacterized LOC1036915642140618308140622961Rat
9444651LOC103690087uncharacterized LOC1036900872105272747105309620Rat
9447164LOC103691518eukaryotic translation initiation factor 2 subunit 3 pseudogene2101871010101877680Rat
9410442LOC103691540uncharacterized LOC1036915402133808909133874895Rat
9452260LOC10369151960S ribosomal protein L9 pseudogene2106702784106703392Rat
9412486LOC103691503RNA-binding Raly-like protein28949087589499635Rat
9455317LOC103690206cadherin-18-like27436035974451902Rat
11359058LOC10834996760S ribosomal protein L7a pseudogene27813403578138432Rat
11367342LOC108350232uncharacterized LOC10835023229632176496325294Rat
11358051LOC108349966uncharacterized LOC10834996626134588761383599Rat
11356258LOC10835000060S ribosomal protein L26 pseudogene2124623209124623707Rat
11449060LOC108350001uncharacterized LOC1083500012126215662126222979Rat
11433414LOC108349989uncharacterized LOC1083499892115580763115664155Rat
11433429LOC108350006uncharacterized LOC1083500062140096877140112800Rat
11461178LOC10835023760S ribosomal protein L17 pseudogene2113518075113519418Rat
11461439LOC108350248uncharacterized LOC1083502482140004634140006567Rat
11461857LOC108350212uncharacterized LOC1083502122111498367111511686Rat
11463101LOC10835018160S ribosomal protein L15 pseudogene2113871819113873432Rat
11463145LOC108350011cytochrome c oxidase assembly protein COX16 homolog, mitochondrial pseudogene2141553348141554004Rat
11463542LOC108350156protein dpy-30 homolog pseudogene26052423360525676Rat
11464133LOC108349988uncharacterized LOC1083499882106574969106593494Rat
11464142LOC108350172igE-binding protein-like27506221675063246Rat
11465045LOC10835024760S ribosomal protein L35 pseudogene2138489925138490277Rat
11465292LOC108349975uncharacterized LOC10834997528869235788695245Rat
11467539Trnay-gua2transfer RNA tyrosine (anticodon GUA) 22104404682104404771Rat
11469315LOC108349999glyceraldehyde-3-phosphate dehydrogenase pseudogene2124486733124488852Rat
11471287LOC108350183glyceraldehyde-3-phosphate dehydrogenase pseudogene2124486223124486737Rat
11473249LOC108349984uncharacterized LOC1083499842104143140104152339Rat
11457724LOC108349973zinc finger protein 728-like28695178986968928Rat
11437210LOC108349979uncharacterized LOC10834997929492979794938468Rat
11445903LOC108350231uncharacterized LOC10835023127571089175711808Rat
11446747LOC108350180uncharacterized LOC1083501802107013790107038637Rat
11438193LOC108349985uncharacterized LOC1083499852104691509104698190Rat
11447466LOC108350175zinc finger protein 737-like28642569186435068Rat
11447753LOC108350179serine/arginine repetitive matrix protein 1 pseudogene29814306798159684Rat
11438648LOC108350241uncharacterized LOC1083502412121238483121243625Rat
11361538LOC108350244uncharacterized LOC1083502442127359295127363392Rat
11440273LOC108349993uncharacterized LOC1083499932121546418121552094Rat
11366023LOC108353416uncharacterized LOC1083534162114861795114865678Rat
11370167Trnap-agg3transfer RNA proline (anticodon AGG) 329833926998339340Rat
11373430LOC10835018540S ribosomal protein S6-like2125017431125064282Rat
11431841Trnar-acg1transfer RNA arginine (anticodon ACG) 12104403855104403927Rat
11441417LOC108349981uncharacterized LOC10834998129566947295832885Rat
11453452LOC108349992uncharacterized LOC1083499922120805948120826210Rat
11453461LOC108350230glyceraldehyde-3-phosphate dehydrogenase pseudogene26377458763777408Rat
11433166LOC10835024260S ribosomal protein L7a pseudogene2124358493124359313Rat
11454091LOC108349996uncharacterized LOC1083499962122867164122870554Rat
11412602LOC108349994uncharacterized LOC1083499942121769189121774191Rat
11415832LOC108350234endogenous retrovirus group K member 8 Pol protein-like29812833598130914Rat
11416565LOC108350003endogenous retrovirus group K member 25 Pol protein-like2128795384128796632Rat
11417765LOC108349990uncharacterized LOC1083499902118210564118256252Rat
11417777LOC108350236uncharacterized LOC1083502362108964096108983280Rat
11417786LOC108350239serine/arginine-rich splicing factor 7 pseudogene2116438859116439582Rat
11418558LOC108349977uncharacterized LOC10834997729376094593766500Rat
11418567LOC108349987uncharacterized LOC1083499872106570533106576630Rat
11418901LOC10834997060S ribosomal protein L27 pseudogene28092006780921048Rat
11418902LOC108349974uncharacterized LOC10834997428775422187782286Rat
11421872LOC108349986uncharacterized LOC1083499862105525669105538521Rat
11423168LOC108350235succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial pseudogene2104593295104595213Rat
11425228LOC108350240uncharacterized LOC1083502402120413321120415508Rat
11425377LOC108349995uncharacterized LOC1083499952121978834122014412Rat
11355185LOC108350176zinc finger protein 728 pseudogene28686824286869229Rat
11426711Trnap-ugg2transfer RNA proline (anticodon UGG) 22140414837140414908Rat
11427226LOC108349972uncharacterized LOC10834997228691000386913443Rat
11384727Smim43small integral membrane protein 432123227621123235170Rat
11384865LOC108349983uncharacterized LOC1083499832101942123102302821Rat
11384874Trnaa-agc2transfer RNA alanine (anticodon AGC) 22104404891104404963Rat
11373688LOC108350177voltage-dependent anion-selective channel protein 1 pseudogene29608229296112313Rat
11374296LOC108350013uncharacterized LOC1083500132145398003145399903Rat
11374486LOC108350233glyceraldehyde-3-phosphate dehydrogenase pseudogene29636073996361744Rat
11385321LOC10835000860S ribosomal protein L35a pseudogene2140545260140545651Rat
11386574LOC108349982heterogeneous nuclear ribonucleoprotein K pseudogene2101739380101744693Rat
11386619LOC10835018760S ribosomal protein L39 pseudogene2144106220144106375Rat
11386721LOC108350173charged multivesicular body protein 5 pseudogene27777163977772609Rat
11386981LOC108350012uncharacterized LOC1083500122144675083144680463Rat
11409796LOC108350002uncharacterized LOC1083500022128778066128779706Rat
11378090LOC10835022960S ribosomal protein L17 pseudogene26084474160845328Rat
11410614LOC108350007uncharacterized LOC1083500072140139063140151196Rat
11410912Trnav-aac1transfer RNA valine (anticodon AAC) 12116415357116415429Rat
11379162LOC108350184keratin-associated protein 4-4-like2124992685124993323Rat
11411744LOC108350246uncharacterized LOC1083502462133499955133502346Rat
11380439LOC108349976eukaryotic translation initiation factor 1 pseudogene28934639189347397Rat
11392116LOC108350009uncharacterized LOC1083500092140658698140681558Rat
11403233LOC108349968uncharacterized LOC10834996827809281578096188Rat
11404987LOC108349980uncharacterized LOC10834998029532343695329781Rat
11519496LOC108350174endogenous retrovirus group K member 25 Pol protein-like28247397682475092Rat
11502478LOC108350245uncharacterized LOC1083502452128024823128040099Rat
11505970LOC108349971uncharacterized LOC10834997128446621584483673Rat
11511420LOC108349998uncharacterized LOC1083499982124177865124187096Rat
11511747LOC108350170glyceraldehyde-3-phosphate dehydrogenase pseudogene26186665461868694Rat
11500035LOC108349991uncharacterized LOC1083499912119484695119491037Rat
11483277Trnak-cuu5transfer RNA lysine (anticodon CUU) 52141888434141888506Rat
11513955LOC108350243uncharacterized LOC1083502432124565677124568553Rat
11517695LOC108350182endogenous retrovirus group K member 10 Pol protein-like2115560729115570108Rat
11486967Trnap-agg4transfer RNA proline (anticodon AGG) 42140415824140415895Rat
11488032LOC108350005uncharacterized LOC1083500052139370607139419752Rat
11492656LOC108350178endogenous retrovirus group K member 9 Pol protein-like29813116098139603Rat
11493112LOC108349969tubulin alpha-1C chain-like28131814081321598Rat
11493630LOC10835017160S ribosomal protein L7a pseudogene26334915263457910Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
42119D2Arb633526032528260325636Ratregion
11156D2Mit2431026032535260325665Ratregion
11155D2Wox1418226032542960325610Ratregion
5039408RH12768919026037917560379364Ratregion
5506029NM_1942839326041946660419558Ratregion
39046D2Rat17522326043977460440000Ratregion
5047226RH13220620926045060760450814Ratregion
5077360RH13971218126045181860451998Ratregion
5049412RH13346621526046891460469415Ratregion
5035542Mrpl40026047106560471552Ratregion
5048002RH13265220326054623560546437Ratregion
39170D2Rat17418226074605260746235Ratregion
5046154RH13158918826075513760755324Ratregion
1632808D2Ulb714926079753760797685Ratregion
5089181AU04900316126085362460853784Ratregion
5089261AU04905118126094628260946462Ratregion
36850D2Rat2016026094635460946530Ratregion
5038880RH12738621926096102460961242Ratregion
1636242D2Got38027726096649060966758Ratregion
1629043D2Got31617726097218660972362Ratregion
1637376D2Got31510726129003861290144Ratregion
42576D2Rat27114526131807961318215Ratregion
67827D2Uwm2910726175438661754465Ratregion
5071086RH13487821526188656961886783Ratregion
5043490RH13005521826190758561907802Ratregion
5504480PMC22098P152226194894561949466Ratregion
5035787PMC17879P158326194965061950232Ratregion
5040252RH12817721726201998962020203Ratregion
5054285RH14313621126202157662021786Ratregion
1628294D2Got40119426211481962115007Ratregion
1630974D2Got31411926212872562128838Ratregion
5065292BE12139717426214665462146827Ratregion
5025710RH12936120326221253162212736Ratregion
5047932RH13261220626230555862305763Ratregion
33824D2Mit418826259494662595133Ratregion
42577D2Rat32020726288104362881234Ratregion
67749D2Uwm3022626301173563011983Ratregion
5037031AU04998217126304322963043399Ratregion
5070984RH13481919726309659363096789Ratregion
5053137RH14247529226309725663097547Ratregion
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34487D2Mgh330426353816363538449Ratregion
5078624RH14045113926375404063754179Ratregion
5066584AU04827117726443936564439541Ratregion
1639116D2Ulb634326452894464529286Ratregion
5069754AU02910912126456329264563412Ratregion
40470D2Rat29917026456594664566111Ratregion
1635435D2Got31711826462289364623010Ratregion
5036761AU04911917026486730264867471Ratregion
5069770AU02885912626510446965104594Ratregion
42117D2Arb4223026569690465697149Ratregion
5076898RH13944315426636589266366061Ratregion
33739D2Mit531826682804966828236Ratregion
43500D2Got18314426701224267012385Ratregion
1579111D2Chm29424126841641368416653Ratregion
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5050680RH13419618426881595368816136Ratregion
5051801RH9466626526881974568820009Ratregion
35915D2Rat6117726886541468866454Ratregion
66432D9Mco728526922423269224582Ratregion
35142D2Rat2212726924368669243798Ratregion
5062274BE10646418426927881069278993Ratregion
41188D2Rat20622226942918369429411Ratregion
60324D2Got4719126976603169766220Ratregion
36017D2Rat7413026996027169960400Ratregion
5078262RH14023718427003778470037967Ratregion
43501D2Got4421327119078271190994Ratregion
5082003BF40902014427253888672539029Ratregion
5088221AU04843918027330024773300426Ratregion
1578914D2Chm29624427339498573395228Ratregion
40074D2Rat20713727390014473900284Ratregion
42578D2Rat32223927408923074089466Ratregion
42579D2Rat32320727441698174417195Ratregion
1579114D2Chm29924227461119674611437Ratregion
10319D2Mco4121227468492474685139Ratregion
42287D2Rat37120727475059374750791Ratregion
5502415RH124784027513504675135240Ratregion
5080072RH14136718127513506275135244Ratregion
5067508AU04770217327519046875190640Ratregion
40560D2Rat27316327530755475307738Ratregion
35643D2Rat2111327568749575687607Ratregion
66659D2Mco1714327589611275896315Ratregion
43513D2Got4019727598409075984286Ratregion
5053403RH14262810027633451176334610Ratregion
1636921D2Got32110727637626076376366Ratregion
43494D2Got3210527637626376376367Ratregion
5071228RH13496121627670713576707350Ratregion
5058734AI54954711127694083376940943Ratregion
34914D2Rat2317427720259577202776Ratregion
41000D2Rat20314927762806877628212Ratregion
5070814RH13472118727763308477633270Ratregion
60320D2Got3413027766734877667477Ratregion
5506789G4539624027773553277735771Ratregion
5065696BF40622711327777547877775590Ratregion
5079442RH14100020727778388677784433Ratregion
5078078RH14013122027778425077784469Ratregion
5033095RH13757517127789675377896923Ratregion
39828D2Rat20423527790421877904438Ratregion
5502801MYO1013627806200478062139Ratregion
5032475D15Ertd600e20627807223578072440Ratregion
5051000RH13438020527807808978078293Ratregion
5047450RH13233518927810452578104713Ratregion
5055501RH14383811527825566878255782Ratregion
7191218D2Mit618927832141078321595Ratregion
33620D2Mit618927832141078321595Ratregion
5055501RH14383811527840014178400255Ratregion
7191218D2Mit618927846607578466260Ratregion
33620D2Mit618927846607578466260Ratregion
41758D2Rat27220027860717978607374Ratregion
37132D2Rat14412527882379778823927Ratregion
5062904AW52886115027892618878926337Ratregion
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43503D2Got3812727927617879276304Ratregion
43502D2Got3624427943388479434127Ratregion
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5074856RH13825817727975473479754910Ratregion
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37664D2Rat16721527996964479969856Ratregion
1631348D2Ulb1627427997567979975952Ratregion
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5070311RH12647724528025726980257513Ratregion
5025128RH12660820628026956680269771Ratregion
5053449RH14265514028026982280269961Ratregion
5090181AU04959910428028911980289222Ratregion
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5038774RH12732519428038369780383889Ratregion
5033855RH14037116328047154080471702Ratregion
5077060RH13953618028047154080471719Ratregion
5040210RH12815318128047200280472182Ratregion
5053689RH14279411928047257080472688Ratregion
5075250RH13848616428047965080479813Ratregion
5029241RH14404912128049895080499070Ratregion
5065390BE11531416628051038080510545Ratregion
1633796D2Got38112028054679680546915Ratregion
5082649BE11992917028057807380578242Ratregion
5055073RH14359012728058450080584626Ratregion
36693D2Rat7514228063195080632091Ratregion
66661D2Mco1813928063195380632096Ratregion
5062204BE10632215128066590980666059Ratregion
5055497RH14383527828074213280742409Ratregion
1579021D2Chm17225028076201980762268Ratregion
5504809ha2145028085014580850665Ratregion
5505128Krt1876328087857080879555Ratregion
5505128Krt1876328087879380879555Ratregion
7193028Krt1816728087951980879685Ratregion
1630515D2Ulb819928089097780891175Ratregion
67750D2Uwm3119728096499280965184Ratregion
5089633AU04927121628100317481003390Ratregion
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5071858RH13532519828156610981566306Ratregion
43507D2Wox2819028169201581692198Ratregion
66651D2Mco1219428281848082818694Ratregion
39512D2Rat21013828318756483187711Ratregion
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5030869BE12097015028358090983581058Ratregion
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39370D2Rat21213828375490783755024Ratregion
41788D2Rat27520828381960883819822Ratregion
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43512D2Got4119728397045283970646Ratregion
43510D2Got3322928403548084035708Ratregion
42581D2Rat32412328405277784052877Ratregion
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37474D2Rat27620928427065984270863Ratregion
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5034966AI01017218528435850884358692Ratregion
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39216D2Rat9521428439468884394897Ratregion
40478D2Rat27723728442413984424363Ratregion
5076716RH13933712028442532884425447Ratregion
5039534RH12776118728453373484533920Ratregion
5025572RH12884116328466663084666792Ratregion
5043006RH12977516128466663184666791Ratregion
5079302RH14090319028466749384667682Ratregion
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5086857AI10459419428469392584694118Ratregion
43508D2Got4628628527143685271721Ratregion
42582D2Rat32514328531832885318467Ratregion
42585D2Rat32821028553621885536379Ratregion
34190D2Mgh1915028564251785642672Ratregion
5505899UniSTS:4960149128566415585664245Ratregion
5080138RH14140620728580299785803203Ratregion
42584D2Rat32724928615811386158367Ratregion
5066412AU04837220228627329886273499Ratregion
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5050700RH13420818028646903886469217Ratregion
5501305D19S41745428681539886815851Ratregion
5047338RH13227019828689878286898979Ratregion
5055923RH14408112028690279286902911Ratregion
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5085501BM39048619428701133187011524Ratregion
1635810D2Got40426328711121187111473Ratregion
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5033003RH13725025028809777888098027Ratregion
5084206AA89391616728810240688102572Ratregion
5061768AW5332909828811158088111677Ratregion
5042290RH12934921828812654988126760Ratregion
5039234RH12758919028812658388126765Ratregion
5506125UniSTS:4984218328813677888136860Ratregion
5043368RH12998618428822720588227388Ratregion
5025818RH12979721228835087188351082Ratregion
5084990AI00888620328835689788357099Ratregion
5064186BE11419015028840288988403038Ratregion
5066592AU04826611128841025788410371Ratregion
5045690RH13132318628847486788475052Ratregion
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1634704D2Got32511228882203188822142Ratregion
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5051485AW54596612128889402288894138Ratregion
5028713A009S3514828898629988986446Ratregion
5506941G3282014828898629988986446Ratregion
37274D2Rat13524928901132789011585Ratregion
5081933BE11878420328903729789037499Ratregion
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34914D2Rat2317428922805789228238Ratregion
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5057468AA85874821128984362189843831Ratregion
5036701AU04892010328990656189906663Ratregion
7206294Spic60229114826691148867Ratregion
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38726D2Rat16314629251259092512750Ratregion
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37816D2Rat14521729263207292632278Ratregion
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38592D2Rat11321429375780693758029Ratregion
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5079444RH14100119129468942594689615Ratregion
5062766AW53437915829469045894690615Ratregion
5086586BM38587017829469144094691617Ratregion
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41038D2Rat21411929488246494882578Ratregion
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43519D2Got6415129524909595249244Ratregion
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5035216AA899415992140310556140310654Ratregion
5060172AI713059982140322489140322586Ratregion
5076194RH1390341482140334531140334678Ratregion
5055573RH1438791742140459949140460122Ratregion
5059330AW5300412082140460470140460677Ratregion
5501836MARC_15315-15316:1013436374:14612140531053140531513Ratregion
5033273RH1382271672140533013140533179Ratregion
5049664RH1336101962140533330140533525Ratregion
5044166RH1304471952140535371140535565Ratregion
5026982RH1342751852140551807140551992Ratregion
34497D2Mgh241502140565889140566078Ratregion
5028356D4S32211782140571249140571426Ratregion
5046696RH1319022152140571424140571638Ratregion
5074164RH1378581612140572059140572219Ratregion
5069396AU0465272172140594204140594415Ratregion
5035322BM3870851872140604447140604633Ratregion
5084076AI0117642372140608892140609128Ratregion
5048410RH1328871992140621115140621313Ratregion
1640910D2Got4331822140672700140672881Ratregion
5028771RH1422681632140726500140727255Ratregion
5046240RH1316392162140730326140730541Ratregion
5058800BI2780341902140732390140732579Ratregion
67785D2Uwm91572140766226140766374Ratregion
5502671Dusp141932140836056140836248Ratregion
5076352RH1391251372140905071140905207Ratregion
67785D2Uwm91572140929961140930109Ratregion
60355D2Got932442140958240140958482Ratregion
1631852D2Got383942140971221140971314Ratregion
5066602AU0482601812140972889140973107Ratregion
5066602AU0482601812140972927140973107Ratregion
5071824RH1353051962141022651141022846Ratregion
62511D2Uia92192141084568141084786Ratregion
5057486BG3759011312141121850141121980Ratregion
5061110AW5323521512141194374141194524Ratregion
5056899RH1446451502141228479141228628Ratregion
5085102AW5317752152141454510141454724Ratregion
60798D2Wox91462141583337141583472Ratregion
43543D2Got991792141606897141607075Ratregion
60359D2Got982972141686334141686627Ratregion
5070642RH1346202142141800273141800486Ratregion
5063462BI3018462062141864969141865174Ratregion
36466D2Rat341742142053350142053534Ratregion
5504859ha253102142094995142095928Ratregion
1632110D2Mco471812142099739142099919Ratregion
5050738RH1342302072142196851142197057Ratregion
5055633RH1439131522142264036142264187Ratregion
41152D2Rat2201382142289751142289896Ratregion
5034193RH1417191802142290672142290851Ratregion
5068978AU0468052972142355387142355684Ratregion
1358030D2Chm332092142355464142355672Ratregion
7193097BI2810071812142461650142461830Ratregion
5034606BI2810071592142461651142461809Ratregion
5064048AA9561421812142461781142461961Ratregion
43540D2Got971602142468770142468929Ratregion
43541D2Got1042222142658199142658420Ratregion
5062358BF4031892182142670753142670970Ratregion
5073220RH1373101812142672348142672528Ratregion
5050004RH1338072102142705218142705427Ratregion
5078334RH1402801832142706078142706260Ratregion
5057672BF3925482282142707725142707938Ratregion
5064046BE1205351922142735175142735366Ratregion
5073662RH1375671962142745424142745619Ratregion
5080342RH1415242152142747017142747231Ratregion
5063238BF4105802232142891004142891226Ratregion
42598D2Rat3872412142929476142929711Ratregion
5058702BE1023371712143096820143096990Ratregion
5026728RH1333092022143097476143097677Ratregion
60279D2Got1021522143165525143165676Ratregion
5502957Trpc47662143604074143604839Ratregion
7205972Trpc41092143604534143604642Ratregion
5071126RH1349011852143604778143604962Ratregion
5499787UniSTS:2346791302143662932143663061Ratregion
5054847RH1434591762143675945143676120Ratregion
5026394RH1320371932143679426143679618Ratregion
1639722D2Got4322872143684464143684750Ratregion
5027243AI7470961472143687691143687837Ratregion
5086161AA9976331112143687815143687925Ratregion
5031185BF4074371042143691486143691589Ratregion
60278D2Got1011062143859241143859346Ratregion
5032351AI4505441212143913652143913772Ratregion
5042268RH1293362182143925689143926186Ratregion
5087086AA9244601732143925826143926741Ratregion
5028234D3Mit2751192143940247143940365Ratregion
5043140RH1298551832143945093143946041Ratregion
5043632RH1301371872143946056143946242Ratregion
5077846RH1399931872143946105143946291Ratregion
5029011RH1431771112143986905143987015Ratregion
5051967RH947631602143998004143998163Ratregion
5078666RH140478922144001490144001581Ratregion
5048820RH1331241962144003460144003655Ratregion
5029011RH1431771112144196866144196976Ratregion
5051967RH947631602144207965144208124Ratregion
5078666RH140478922144211451144211542Ratregion
5048820RH1331241962144213421144213616Ratregion
5062820AW5283392412144303744144303983Ratregion
37232D2Rat1832092144313532144313740Ratregion
5086439AA9645101592144458263144459936Ratregion
5504752PMC86923P17522144462297144463048Ratregion
5499497stSG60227711102144533307144534416Ratregion
5049892RH1337422142144547208144547421Ratregion
5041298RH1287761992144548745144548943Ratregion
60280D2Got1031152144553351144553465Ratregion
1358019D2Chm1221972144631170144631366Ratregion
5062758AW5343032082144661314144661521Ratregion
5050326RH1339911902144692995144693184Ratregion
5067408AU0477671272144741854144741980Ratregion
5055195RH1436611612144818325144818485Ratregion
5080174RH1414282142144866785144866998Ratregion
5031015AA9631942192144867175144867393Ratregion
5058902BF3872081682144885440144885607Ratregion
5074886RH1382751522144901393144901544Ratregion
5074368RH1379771852144923821144924005Ratregion
5062232BE1063901622144928890144929051Ratregion
5070346AI8367581422144939004144939145Ratregion
5033619RH1394882052144939080144939284Ratregion
5078400RH1403201752144939111144939285Ratregion
5032523T034091952145011680145011874Ratregion
5064862BF4052111862145017656145017841Ratregion
5070440AW047968802145176878145176957Ratregion
5060704BE1043141602145246804145246963Ratregion
5063592BE1078021532145292961145293113Ratregion
42289D2Rat3731202145431818145431936Ratregion
40780D2Rat2222382145514574145514793Ratregion
5082023BF4156731592145569922145570080Ratregion
5059848BF3946092112145570626145570836Ratregion
39616D2Rat2562262145658627145658850Ratregion
37768D2Rat1661462145903536145903673Ratregion
5031618AU0477181792145914543145914721Ratregion
41300D2Rat2211672145956460145956618Ratregion
1358000D2Chm1132482145975749145975996Ratregion
66480D2Uia151322145999995146000126Ratregion
5028963RH1429911162146044624146044739Ratregion
1640946D2Got3311482146055543146055690Ratregion
5088293AU0484832062146065749146065954Ratregion
5507103UniSTS:2245871892146755969146756157Ratregion
5068408AU0471642062146808236146808441Ratregion
5082023BF4156731592147057231147057389Ratregion
5059848BF3946092112147057935147058145Ratregion
34114D2Mgh151502147122993147123148Ratregion
5046820RH1319732052147371639147371843Ratregion
5050002RH1338051962147383190147383385Ratregion
5040394RH1282581822147383616147383797Ratregion
5046290RH13166702147475808147476034Ratregion
5051102RH1344411882147480234147480416Ratregion
5064476BE1080491502147493877147494026Ratregion
33983D2Mit232642147522550147522851Ratregion
Position Markers

Flank 1: (D2Mit24)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2259,324,377 - 59,324,691 (+)MAPPER
Rnor_6.0260,325,352 - 60,325,665NCBI
Rnor_5.0284,360,871 - 84,361,184UniSTS
RGSC_v3.4259,700,886 - 59,701,200RGD
RGSC_v3.4259,700,887 - 59,701,200UniSTS
RGSC_v3.1259,629,119 - 59,629,433RGD
Celera259,347,132 - 59,347,445UniSTS
RH 3.4 Map2408.7UniSTS
RH 3.4 Map2408.7RGD
Cytogenetic Map2q16UniSTS
Peak: (D2Mit17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22106,741,551 - 106,741,741 (+)MAPPER
Rnor_6.02109,518,711 - 109,518,900NCBI
Rnor_5.02129,243,056 - 129,243,245UniSTS
RGSC_v3.42109,557,815 - 109,558,005RGD
RGSC_v3.42109,557,816 - 109,558,005UniSTS
RGSC_v3.12109,502,778 - 109,502,967RGD
Celera2102,024,881 - 102,025,070UniSTS
RH 3.4 Map2751.6UniSTS
RH 3.4 Map2751.6RGD
SHRSP x BN Map237.6698UniSTS
SHRSP x BN Map237.6698RGD
Cytogenetic Map2q24UniSTS
Flank 2: (D2Mit23)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22141,596,551 - 141,596,857 (+)MAPPER
Rnor_6.02147,522,550 - 147,522,851NCBI
Rnor_5.02166,931,667 - 166,931,968UniSTS
RGSC_v3.42146,659,370 - 146,659,672RGD
RGSC_v3.42146,659,371 - 146,659,672UniSTS
RGSC_v3.12146,609,297 - 146,609,712RGD
Cytogenetic Map2 RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)23127638105149020Rat
1578671Bmd10Bone mineral density QTL 105.4femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)2944467968866454Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)216679272245624402Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21901646564016465Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22027698165276981Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22064137165641371Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22261295267612952Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22328064775687607Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)223837491149614623Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22618609783819822Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226186097135654963Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226186097142053534Rat
12879841Cm87Cardiac mass QTL 870.026heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)227161361148295267Rat
12879842Cm88Cardiac mass QTL 880.042heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)227161361148295267Rat
12879843Am3Aortic mass QTL 30.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)227161361148295267Rat
12879844Kidm62Kidney mass QTL 620.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227161361148295267Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22776030172760301Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23127237976272379Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23408817591101903Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23513320280133202Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)236245223112175725Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240171834105089682Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24277691662238534Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916169852800Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916195645082Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243133606217498545Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243133606217498545Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243141290114164944Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243141290114164944Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243141290154583160Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight as a percentage of body weight (CMO:0000654)24314978885642672Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243149788198704485Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246537589217498710Rat
1354592Rf50Renal function QTL 503.5urine output (VT:0003620)timed urine volume (CMO:0000260)25443669875687607Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256244671217498710Rat
1579916Bp270Blood pressure QTL 2700.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)25673640160325686Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)25771560378466260Rat
6480225Gdil1Gastrointestinal dilation QTL 1enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)25834410075687607Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)260131410135646395Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)260325352106432915Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)260325352106432915Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)260325352147522851Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)260325686105059293Rat
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)261924251106924251Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828049217498710Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828236243550655Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)26886541480632096Rat
1581576Pur7Proteinuria QTL 70.0001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)26886541480632096Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)268865414169852800Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)26886645480631953Rat
1581578Cm49Cardiac mass QTL 494.90.01heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)268866454149614466Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)270132175115132175Rat
2317041Aia14Adjuvant induced arthritis QTL 143.29joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)271495404116495404Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)27568749596556760Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)27568749596556760Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)275687495221880419Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)27832141079969856Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)diastolic blood pressure (CMO:0000005)278321410105089682Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)278321410105089682Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)278321410158159410Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278321410217498710Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)280631950149614623Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)282574487127574487Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)283656855128656855Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)283754907237610852Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)283819608239166203Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)283819608243901375Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)284424139132130578Rat
2300165Bmd49Bone mineral density QTL 494.80.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)291664872136664872Rat
2300170Bmd45Bone mineral density QTL 4512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)291664872136664872Rat
2300185Bmd46Bone mineral density QTL 468.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)291664872136664872Rat
7207808Bmd89Bone mineral density QTL 894.1femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)291664872136664872Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)293995316169852800Rat
1598862Glom9Glomerulus QTL 93.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)295946719140946719Rat
1598863Cm65Cardiac mass QTL 652.3heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)295946719140946719Rat
2317886Alcrsp23Alcohol response QTL 232.40.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)296844330141844330Rat
9589093Slep10Serum leptin concentration QTL 103.840.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)2102356980147356980Rat
631566Bp90Blood pressure QTL 900.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2108880910153880910Rat
8662836Vetf8Vascular elastic tissue fragility QTL 80.66thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2110965721155965721Rat
1581552Pur12Proteinuria QTL 125.190.0009total urine protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)2115721880154182196Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2116075644228737869Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2116075644228737869Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2118446646149614623Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2118446646149614623Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2118446646200453484Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2118446646200453484Rat
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2118446646227707979Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2118446793228582621Rat
1354594Despr10Despair related QTL 100.00000249locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)2119789823164789823Rat
5135226Leukc2Leukocyte quantity QTL 2eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)2121750419155965721Rat
1582257Gluco21Glucose level QTL 213.10.0035blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2121750419169852800Rat
738007Anxrr7Anxiety related response QTL 74.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2123456539168456539Rat
1358360Sradr2Stress Responsive Adrenal Weight QTL 210.24adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)2133399373173020198Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2138901276217498710Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2140566078217498545Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2140566078217498545Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2140566078217498545Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)2140566078217498545Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2140566078217498545Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141583337217498710Rat
1581502Esta3Estrogen-induced thymic atrophy QTL 3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2142053350204585731Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2142053350228984665Rat
1549841Bp256Blood pressure QTL 2560.03arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2142355464148295508Rat
12879830Bw178Body weight QTL 1780.001body mass (VT:0001259)body weight (CMO:0000012)2142355464148295508Rat
12879831Cm82Cardiac mass QTL 820.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2142355464148295508Rat
12879832Cm83Cardiac mass QTL 830.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2142355464148295508Rat
12879833Cm84Cardiac mass QTL 840.001heart right ventricle mass (VT:0007033)heart weight to body weight ratio (CMO:0000074)2142355464148295508Rat
12879834Am1Aortic mass QTL 10.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2142355464148295508Rat
12879835Kidm60Kidney mass QTL 600.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2142355464148295508Rat
6907363Bp357Blood pressure QTL 3574.10.002arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2143447078188447078Rat
7488931Bp367Blood pressure QTL 3670.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2144631170148295508Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2147122993240020001Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2147122993240020001Rat
71113Cari2Carrageenan-induced inflammation QTL 22.70.009hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)2147522550217498710Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Cia7


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Cia7  Collagen induced arthritis QTL 7    Type II Collagen induced arthritis QTL 7  Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_disease homologous region on human chromosome 5p12-p14 is linked to multiple sclerosis in humans 61063
qtl_gene whole genome analysis using PGMapper revealed Tnfsf10, Il6st, Crh, C6, C7, Il2, Ank, Il7, Il21, Tenr and Prlr as RA associated genes and Crh, Il2, Il21, Tenr as RA associated polymorphism either in coding or regulatory region 2300074
qtl_gene 522 known and 251 novel genes were found in an analysis based on PubMed and OMIM data 2307198
qtl_gene peak is located 1.8 cM telomeric from carboxypeptidase B (Cpb1) 61063
qtl_general in analysis of BB/DR x BN cross, disease-enhancing alleles were contributed by the BN parent 61067