Cm60 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Cm60 (Cardiac mass QTL 60) Rattus norvegicus

Symbol: Cm60
Name: Cardiac mass QTL 60
RGD ID: 1582246
Also known as: heart weight/100g; Heart wt/100g
Trait: heart mass   (VT:0007028)    
Measurement Type: heart weight to body weight ratio   (CMO:0000074)    
LOD Score: 5.8
P Value: Not Available
Variance: 24.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0257,715,603 - 78,466,260RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0279,200,355 - 98,153,468RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4258,117,457 - 77,630,814RGDRGSC3.4
RGSC_v3.1258,045,691 - 77,562,125RGD
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
heart mass  (IDA)

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
1. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2322Cdh6cadherin 626310072363246618Rat
619958Pdzd2PDZ domain containing 226239974862520448Rat
619741Cdh10cadherin 1026941517469636849Rat
3196Npr3natriuretic peptide receptor 326188394661950291Rat
3407Prlrprolactin receptor26013141060325686Rat
621226Golph3golgi phosphoprotein 326236075462388773Rat
620450Spef2sperm flagellar 225890193759084194Rat
621582Sub1SUB1 regulator of transcription26201990262034704Rat
621729Dnajc21DnaJ heat shock protein family (Hsp40) member C2126041944660446656Rat
621767Agxt2alanine-glyoxylate aminotransferase 226033766760379144Rat
3048Amacralpha-methylacyl-CoA racemase26094927660961342Rat
2542Egfepidermal growth factor26882061668895537Rat
1306809Nadk2NAD kinase 2, mitochondrial25846258858504735Rat
1305010C1qtnf3C1q and TNF related 326092016060942586Rat
621491Basp1brain abundant, membrane attached signal protein 127758642477632626Rat
1307323Adamts12ADAM metallopeptidase with thrombospondin type 1 motif, 1226103907261340687Rat
1308508Brix1biogenesis of ribosomes BRX126045054760461425Rat
1306690Slc45a2solute carrier family 45, member 226096667160999398Rat
1307193Myo10myosin X27786839878072443Rat
3698Slc1a3solute carrier family 1 member 325786088157935363Rat
1309146Zfp622zinc finger protein 62227840731278421152Rat
1559887RGD1559887similar to Transducin-like enhancer protein 4 (Groucho-related protein 4) (Grg-4)27705771977112614Rat
1311550Rxfp3relaxin family peptide receptor 326100633761007767Rat
1307626Droshadrosha ribonuclease III26288726763000307Rat
1311890Zfrzinc finger RNA binding protein26215025162213048Rat
1305942Rai14retinoic acid induced 1426054608360684365Rat
1307559Ranbp3lRAN binding protein 3-like25822177358458072Rat
1306496Rad1RAD1 checkpoint DNA exonuclease26046151360469646Rat
1306502RGD1306502similar to hypothetical protein FLJ1119326287087162887048Rat
1305430Cdh18cadherin 1827365140874693342Rat
1308776Capslcalcyphosine-like25872485558755220Rat
1308343Cdh9cadherin 926693879667078897Rat
1307902Mtmr12myotubularin related protein 1226223649762305995Rat
1564928Ttc23ltetratricopeptide repeat domain 23-like26049231460538551Rat
1563920Lmbrd2LMBR1 domain containing 225853447458590767Rat
1562936RGD1562936similar to Heat shock protein HSP 90-beta (HSP 84)27295968172963589Rat
1563445RGD1563445similar to glyceraldehyde-3-phosphate dehydrogenase27622567476226656Rat
1565003Retreg1reticulophagy regulator 127839192178401569Rat
1563766LOC499542LRRGT0017826174958161757917Rat
1564125RGD1564125similar to Cln5 protein26660059566615026Rat
1560001LOC499544LRRGT0015426199174262018698Rat
1562456Skp2S-phase kinase associated protein 225850614658534211Rat
1561906RGD1561906similar to RIKEN cDNA 4930430F0827381996073822243Rat
1565422RGD1565422similar to 60S ribosomal protein L3527165212171755719Rat
1583573LOC681117similar to ribosomal protein L626916003469204472Rat
1585807LOC680982hypothetical protein LOC68098226636776166369428Rat
1583285Hspd1-ps25heat shock protein 1, pseudogene 2527549530575498884Rat
1565852LOC499541LRRGT0004526169178561712850Rat
1566350Cdh12cadherin 1227131022872540063Rat
1566273RGD1566273similar to exo-alpha-sialidase (EC 3.2.1.18) - Trypanosoma cruzi27775599077772012Rat
1564365Ugt3a2UDP glycosyltransferase 3 family, polypeptide A225866633758682212Rat
1589752LOC310182similar to heterogeneous nuclear ribonucleoprotein M27842553978427709Rat
1589753LOC310177similar to RIKEN cDNA 0610040D2027778378877784626Rat
1592966LOC680363hypothetical protein LOC68036326147822161479356Rat
1586190LOC294831similar to ubiquitin-conjugating enzyme E2R 227022468870343525Rat
1589593LOC502512similar to 60S ribosomal protein L7a27640964176423866Rat
1585892LOC679697similar to non-POU domain containing, octamer-binding25920923359248518Rat
1583619LOC679871hypothetical protein LOC67987125823640558237866Rat
1359527Tars1threonyl-tRNA synthetase 126139463261414115Rat
1583588LOC681102similar to synaptosomal-associated protein 23 isoform SNAP23B26830493468306489Rat
1593220LOC365709similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin e127020335270204638Rat
1596656LOC682635similar to CG31855-PA27471190674714279Rat
1594499LOC365693similar to Nuclear protein SkiP (Ski-interacting protein) (SNW1 protein) (Nuclear receptor coactivator NCoA-62)25826646058268039Rat
1594163LOC680268hypothetical protein LOC68026826169462161694896Rat
1596810LOC680078hypothetical protein LOC68007825864542258662825Rat
2318290LOC100362397ubiquitin-conjugating enzyme E2L 3-like27821294278213944Rat
2321484LOC100360774signal-regulatory protein alpha-like27695503876962306Rat
2321536Sirpdsignal-regulatory protein delta27669410776941002Rat
2322932LOC100360013ubiquitin-associated protein 226669848566722913Rat
2323317LOC100359824hypothetical LOC10035982425965689459662581Rat
2323466LOC100359774hypothetical LOC10035977426497695064977728Rat
2323519LOC100359721hypothetical LOC10035972126462757364630635Rat
2323951LOC100362827high-mobility group nucleosomal binding domain 2-like25772858457729007Rat
2324086LOC100362772ribosomal protein S12-like25772506957725578Rat
2324713LOC100363177ferritin light chain 1-like26255615962557234Rat
6489419LOC100912019sperm flagellar protein 2-like25982257559901155Rat
6492359LOC100911520killer cell lectin-like receptor 5-like25953949459544897Rat
6494071LOC100911298heterogeneous nuclear ribonucleoprotein M-like27828131778283487Rat
6494410LOC10091122740S ribosomal protein S9-like25842135758422041Rat
6492786LOC10091147060S ribosomal protein L9-like27838451078385086Rat
6499766LOC100910178pro-epidermal growth factor-like26882060568895943Rat
6504200LOC100909396uncharacterized LOC10090939626285024562852408Rat
7523639LOC102554929uncharacterized LOC10255492927599649976004872Rat
7505957LOC102553625uncharacterized LOC10255362526963236169726367Rat
7503607LOC10254829539S ribosomal protein L40, mitochondrial-like26047004360472523Rat
7662155LOC102556442uncharacterized LOC10255644226443363964453223Rat
7662910LOC102552232uncharacterized LOC10255223226645923066522564Rat
7662935LOC102553734uncharacterized LOC10255373426976306569809916Rat
7621135LOC102546663tyrosine-protein phosphatase non-receptor type substrate 1-like27727777577286844Rat
7666183LOC102554389zinc finger protein 862-like25987605859879483Rat
7655658LOC102547646uncharacterized LOC10254764626077919260783463Rat
7655727LOC102554147uncharacterized LOC10255414727302672573031439Rat
7545253LOC102552872uncharacterized LOC10255287226742307667434026Rat
7735791LOC102551932uncharacterized LOC10255193225811586958124716Rat
7714134LOC102546845uncharacterized LOC10254684526272986762786578Rat
7667351LOC102546311histone H3.3-like27827345178275631Rat
7667725LOC102554526heterogeneous nuclear ribonucleoprotein A3-like27409123674092283Rat
9087741LOC103691485uncharacterized LOC10369148527044576070453754Rat
9200405LOC103691481uncharacterized LOC10369148125780688757809751Rat
9082324LOC103691499signal-regulatory protein beta-1-like27729973977302572Rat
9220222LOC103691498sperm flagellar protein 2-like25914136359181942Rat
9310813LOC10369149740S ribosomal protein S2 pseudogene25844645258448572Rat
9232293LOC103691482uncharacterized LOC10369148225941873359425718Rat
9323704LOC103691484putative hydrolase RBBP9 pseudogene26946220669464200Rat
9387191LOC103691483uncharacterized LOC10369148326073552160743685Rat
9362373LOC103695100uncharacterized LOC10369510026309465463108200Rat
9304689LOC103691488uncharacterized LOC10369148827796872877976188Rat
9421618LOC103691489histone H3.3-like27841767378419853Rat
9329744LOC103691487uncharacterized LOC10369148727639188176396195Rat
9429209LOC103691486uncharacterized LOC10369148627571237975743591Rat
9390936LOC103689968protein FAM134B27810335878257109Rat
9452233LOC103690028zinc finger protein 62227826169978276942Rat
9455317LOC103690206cadherin-18-like27436035974451902Rat
11359058LOC10834996760S ribosomal protein L7a pseudogene27813403578138432Rat
11358051LOC108349966uncharacterized LOC10834996626134588761383599Rat
11462109LOC108349963uncharacterized LOC10834996325891136958919720Rat
11463542LOC108350156protein dpy-30 homolog pseudogene26052423360525676Rat
11464142LOC108350172igE-binding protein-like27506221675063246Rat
11445903LOC108350231uncharacterized LOC10835023127571089175711808Rat
11356949LOC10835015540S ribosomal protein S6 pseudogene25834970358360322Rat
11452641LOC108349960uncharacterized LOC10834996025774993157775595Rat
11453461LOC108350230glyceraldehyde-3-phosphate dehydrogenase pseudogene26377458763777408Rat
11416083LOC108349965uncharacterized LOC10834996526047661060487019Rat
11386716LOC108349961uncharacterized LOC10834996125783367957839632Rat
11386721LOC108350173charged multivesicular body protein 5 pseudogene27777163977772609Rat
11378090LOC10835022960S ribosomal protein L17 pseudogene26084474160845328Rat
11403233LOC108349968uncharacterized LOC10834996827809281578096188Rat
11382166LOC108349962uncharacterized LOC10834996225794072957944594Rat
11511747LOC108350170glyceraldehyde-3-phosphate dehydrogenase pseudogene26186665461868694Rat
11493630LOC10835017160S ribosomal protein L7a pseudogene26334915263457910Rat
11493974LOC108349964uncharacterized LOC10834996425992927159936351Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10319D2Mco4121227468492474685139Ratregion
11155D2Wox1418226032542960325610Ratregion
11156D2Mit2431026032535260325665Ratregion
33824D2Mit418826259494662595133Ratregion
34487D2Mgh330426353816363538449Ratregion
33620D2Mit618927846607578466260Ratregion
33620D2Mit618927832141078321595Ratregion
33739D2Mit531826682804966828236Ratregion
36017D2Rat7413026996027169960400Ratregion
35272D2Rat1914025771560357715731Ratregion
36850D2Rat2016026094635460946530Ratregion
34914D2Rat2317427720259577202776Ratregion
35142D2Rat2212726924368669243798Ratregion
35643D2Rat2111327568749575687607Ratregion
35915D2Rat6117726886541468866454Ratregion
39828D2Rat20423527790421877904438Ratregion
40470D2Rat29917026456594664566111Ratregion
40560D2Rat27316327530755475307738Ratregion
40074D2Rat20713727390014473900284Ratregion
39046D2Rat17522326043977460440000Ratregion
39170D2Rat17418226074605260746235Ratregion
42117D2Arb4223026569690465697149Ratregion
42119D2Arb633526032528260325636Ratregion
42121D2Arb715025834410058344252Ratregion
42287D2Rat37120727475059374750791Ratregion
41188D2Rat20622226942918369429411Ratregion
42574D2Rat38614825824990258250100Ratregion
42576D2Rat27114526131807961318215Ratregion
42577D2Rat32020726288104362881234Ratregion
42578D2Rat32223927408923074089466Ratregion
42579D2Rat32320727441698174417195Ratregion
41000D2Rat20314927762806877628212Ratregion
43494D2Got3210527637626376376367Ratregion
43500D2Got18314426701224267012385Ratregion
43501D2Got4421327119078271190994Ratregion
43513D2Got4019727598409075984286Ratregion
60320D2Got3413027766734877667477Ratregion
60324D2Got4719126976603169766220Ratregion
67827D2Uwm2910726175438661754465Ratregion
66432D9Mco728526922423269224582Ratregion
66537D12Uia227026017016560170434Ratregion
66659D2Mco1714327589611275896315Ratregion
67257D2Arb828025875942158759700Ratregion
67749D2Uwm3022626301173563011983Ratregion
1630974D2Got31411926212872562128838Ratregion
1632178D2Got31222425796215557962378Ratregion
1578914D2Chm29624427339498573395228Ratregion
1578947D2Chm28022126017731460177534Ratregion
1579111D2Chm29424126841641368416653Ratregion
1579114D2Chm29924227461119674611437Ratregion
1627859D2Got39728626346969463469979Ratregion
1628202D2Wox2913625924272759242862Ratregion
1628294D2Got40119426211481962115007Ratregion
1629043D2Got31617726097218660972362Ratregion
1639116D2Ulb634326452894464529286Ratregion
1632736D2Got32014725936186559362011Ratregion
1632808D2Ulb714926079753760797685Ratregion
1633230D2Got31922225975150159751717Ratregion
1640402D2Got42519925841820358418401Ratregion
1635435D2Got31711826462289364623010Ratregion
1636242D2Got38027726096649060966758Ratregion
1636921D2Got32110727637626076376366Ratregion
1637376D2Got31510726129003861290144Ratregion
7192180Prlr12026030785760307976Ratregion
7192180Prlr12026029803160298150Ratregion
5035787PMC17879P158326194965061950232Ratregion
5038880RH12738621926096102460961242Ratregion
5036761AU04911917026486730264867471Ratregion
5037031AU04998217126304322963043399Ratregion
5035542Mrpl40026047106560471552Ratregion
5032475D15Ertd600e20627807223578072440Ratregion
5029953BF40012520025905858159058780Ratregion
5027483AI5042999225791287057912961Ratregion
5033095RH13757517127789675377896923Ratregion
5025710RH12936120326221253162212736Ratregion
5054873RH14347421825789353257893749Ratregion
5051801RH9466626526881974568820009Ratregion
5054285RH14313621126202157662021786Ratregion
5055501RH14383811527840014178400255Ratregion
5055501RH14383811527825566878255782Ratregion
5055103RH14360726325850664458506906Ratregion
5058734AI54954711127694083376940943Ratregion
5059950BF38820419325814522258145414Ratregion
5050680RH13419618426881595368816136Ratregion
5052565AA58950825926863630768636565Ratregion
5053137RH14247529226309725663097547Ratregion
5053403RH14262810027633451176334610Ratregion
5051553AW12520510525874444158744545Ratregion
5051000RH13438020527807808978078293Ratregion
5041370RH12881818425850623358506416Ratregion
5046154RH13158918826075513760755324Ratregion
5047450RH13233518927810452578104713Ratregion
5047932RH13261220626230555862305763Ratregion
5048002RH13265220326054623560546437Ratregion
5049412RH13346621526046891460469415Ratregion
5047226RH13220620926045060760450814Ratregion
5039408RH12768919026037917560379364Ratregion
5039610RH12780418025859487458595053Ratregion
5039928RH12798820426863619268636395Ratregion
5040252RH12817721726201998962020203Ratregion
7191218D2Mit618927846607578466260Ratregion
7191218D2Mit618927832141078321595Ratregion
5043490RH13005521826190758561907802Ratregion
5076898RH13944315426636589266366061Ratregion
5077058RH13953519125786106457861254Ratregion
5074990RH13833515525780691357807067Ratregion
5077360RH13971218126045181860451998Ratregion
5075578RH13867512125850406758504187Ratregion
5079442RH14100020727778388677784433Ratregion
5078262RH14023718427003778470037967Ratregion
5078486RH14037013125786113157861261Ratregion
5078078RH14013122027778425077784469Ratregion
5080072RH14136718127513506275135244Ratregion
5071086RH13487821526188656961886783Ratregion
5078624RH14045113926375404063754179Ratregion
5071228RH13496121627670713576707350Ratregion
5070814RH13472118727763308477633270Ratregion
5070984RH13481919726309659363096789Ratregion
5067508AU04770217327519046875190640Ratregion
5069026AU04677315225841307958413230Ratregion
5069754AU02910912126456329264563412Ratregion
5069770AU02885912626510446965104594Ratregion
5065292BE12139717426214665462146827Ratregion
5062274BE10646418426927881069278993Ratregion
5065696BF40622711327777547877775590Ratregion
5066584AU04827117726443936564439541Ratregion
5088060Prlr13526028596960286103Ratregion
5088221AU04843918027330024773300426Ratregion
5090727AU04992722825787137857871605Ratregion
5089181AU04900316126085362460853784Ratregion
5089261AU04905118126094628260946462Ratregion
5082003BF40902014427253888672539029Ratregion
5502801MYO1013627806200478062139Ratregion
5504857ha260088825926893759269899Ratregion
5504480PMC22098P152226194894561949466Ratregion
5506029NM_1942839326041946660419558Ratregion
5506789G4539624027773553277735771Ratregion
5500362GDB:33540916925787310757873273Ratregion
5501460D9S5527025804793658048205Ratregion
5502415RH124784027513504675135240Ratregion
Position Markers

Flank 1: (D2Rat19)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0257,715,603 - 57,715,731NCBI
Rnor_5.0279,200,355 - 79,200,483UniSTS
RGSC_v3.4258,117,457 - 58,117,586RGD
RGSC_v3.4258,117,458 - 58,117,586UniSTS
RGSC_v3.1258,045,691 - 58,045,819RGD
Celera253,219,155 - 53,219,283UniSTS
RH 3.4 Map2333.2UniSTS
RH 3.4 Map2333.2RGD
RH 2.0 Map2321.6RGD
SHRSP x BN Map225.2298RGD
Peak: (D2Rat19)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0257,715,603 - 57,715,731NCBI
Rnor_5.0279,200,355 - 79,200,483UniSTS
RGSC_v3.4258,117,457 - 58,117,586RGD
RGSC_v3.4258,117,458 - 58,117,586UniSTS
RGSC_v3.1258,045,691 - 58,045,819RGD
Celera253,219,155 - 53,219,283UniSTS
RH 3.4 Map2333.2UniSTS
RH 3.4 Map2333.2RGD
RH 2.0 Map2321.6RGD
SHRSP x BN Map225.2298RGD
Flank 2: (D2Mit6)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0278,321,410 - 78,321,595RGD
Rnor_6.0278,466,075 - 78,466,260RGD
Rnor_5.0298,153,283 - 98,153,468RGD
Rnor_5.0298,037,122 - 98,037,307RGD
RGSC_v3.4277,630,629 - 77,630,814UniSTS
RGSC_v3.1277,561,812 - 77,562,125RGD
Celera272,243,967 - 72,244,152UniSTS
Cytogenetic Map2 RGD
RH 3.4 Map2500.7UniSTS
RH 3.4 Map2500.7RGD
RH 2.0 Map2406.8RGD
SHRSP x BN Map229.4498RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)23127638105149020Rat
1578671Bmd10Bone mineral density QTL 105.4femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)2944467968866454Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21423783059237830Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)216679272245624402Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21901646564016465Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22027698165276981Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22064137165641371Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22261295267612952Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22328064775687607Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)223837491149614623Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22618609783819822Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226186097135654963Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226186097142053534Rat
12879841Cm87Cardiac mass QTL 870.026heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)227161361148295267Rat
12879842Cm88Cardiac mass QTL 880.042heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)227161361148295267Rat
12879843Am3Aortic mass QTL 30.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)227161361148295267Rat
12879844Kidm62Kidney mass QTL 620.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227161361148295267Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22776030172760301Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23127237976272379Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23408817591101903Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23513320280133202Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)236245223112175725Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240171834105089682Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24277691662238534Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916169852800Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916195645082Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243133606217498545Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243133606217498545Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243141290114164944Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243141290114164944Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243141290154583160Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight as a percentage of body weight (CMO:0000654)24314978885642672Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243149788198704485Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246537589217498710Rat
1354592Rf50Renal function QTL 503.5urine output (VT:0003620)timed urine volume (CMO:0000260)25443669875687607Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256244671217498710Rat
1579916Bp270Blood pressure QTL 2700.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)25673640160325686Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)25771560378466260Rat
6480225Gdil1Gastrointestinal dilation QTL 1enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)25834410075687607Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)260131410135646395Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)260325352106432915Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)260325352106432915Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)260325352147522851Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)260325686105059293Rat
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)261924251106924251Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828049217498710Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828236243550655Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)26886541480632096Rat
1581576Pur7Proteinuria QTL 70.0001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)26886541480632096Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)268865414169852800Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)26886645480631953Rat
1581578Cm49Cardiac mass QTL 494.90.01heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)268866454149614466Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)270132175115132175Rat
2317041Aia14Adjuvant induced arthritis QTL 143.29joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)271495404116495404Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)27568749596556760Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)27568749596556760Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)275687495221880419Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)27832141079969856Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)278321410105089682Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)diastolic blood pressure (CMO:0000005)278321410105089682Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)278321410158159410Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278321410217498710Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general these rats were on a high sucrose diet (HSD; 70% calories as sucrose) for 1 week; while still on sucrose diet, dexamethasone (DEX) was given in drinking water (0.026mg/ml) for 3 days then these animals were killed and the heart was weighed 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test 1580752