Cm60 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cm60 (Cardiac mass QTL 60) Rattus norvegicus

Symbol: Cm60
Name: Cardiac mass QTL 60
RGD ID: 1582246
Also known as: heart weight/100g; Heart wt/100g
Trait: heart mass   (VT:0007028)    
Measurement Type: heart weight to body weight ratio   (CMO:0000074)    
LOD Score: 5.8
P Value: Not Available
Variance: 24.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2257,605,612 - 76,539,510RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0257,715,603 - 78,466,260RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0279,200,355 - 98,153,468RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4258,117,457 - 77,630,814RGDRGSC3.4
RGSC_v3.1258,045,691 - 77,562,125RGD
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
heart mass  (IDA)

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
1. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2324086LOC100362772ribosomal protein S12-like25761507957615691Rat
2323951LOC100362827high-mobility group nucleosomal binding domain 2-like25761869057618983Rat
9200405LOC103691481uncharacterized LOC10369148125770176757704913Rat
3698Slc1a3solute carrier family 1 member 325775549557830605Rat
11382166LOC108349962uncharacterized LOC10834996225783544257840143Rat
1307559Ranbp3lRAN binding protein 3-like25805788758113158Rat
1583619LOC679871hypothetical protein LOC67987125810144858102404Rat
41207236LOC120100736uncharacterized LOC12010073625810997758118986Rat
1306809Nadk2NAD kinase 2, mitochondrial25811767458159815Rat
1562456Skp2S-phase kinase associated protein 225816122658189293Rat
1563920Lmbrd2LMBR1 domain containing 225818955858251565Rat
1596810LOC680078hypothetical protein LOC68007825831491258327069Rat
1564365Ugt3a2UDP glycosyltransferase 3 family, polypeptide A225832705858350186Rat
41241035LOC120100994UDP-glucuronosyltransferase 3A1-like25838571458389680Rat
1308776Capslcalcyphosine-like25839499558425527Rat
1309776Il7rinterleukin 7 receptor25845239358477757Rat
620450Spef2sperm flagellar 225851248958694718Rat
41111255LOC120100737E3 SUMO-protein ligase KIAA1586-like25853208058540473Rat
41397082LOC120100738uncharacterized LOC12010073825862629358669887Rat
41127911LOC120100739non-POU domain-containing octamer-binding protein-like25875832858760040Rat
41178470LOC120100559uncharacterized LOC12010055925877866258796834Rat
3407Prlrprolactin receptor25913414759324719Rat
621767Agxt2alanine-glyoxylate aminotransferase 225933625259377664Rat
621729Dnajc21DnaJ heat shock protein family (Hsp40) member C2125941950559446743Rat
1308508Brix1biogenesis of ribosomes BRX125945060859461486Rat
1306496Rad1RAD1 checkpoint DNA exonuclease25946159759469707Rat
41184907LOC120101260small nucleolar RNA SNORA4825946698059467107Rat
7503607LOC10254829539S ribosomal protein L40, mitochondrial-like25946985759471850Rat
1564928Ttc23ltetratricopeptide repeat domain 23-like25947666659538313Rat
40934801LOC120100627protein dpy-30 homolog25952263859526672Rat
1305942Rai14retinoic acid induced 1425954628459682687Rat
41276753LOC120100740uncharacterized LOC12010074025960122159605292Rat
9387191LOC103691483uncharacterized LOC10369148325973429159747359Rat
11378090LOC10835022960S ribosomal protein L17 pseudogene25984172659842316Rat
1305010C1qtnf3C1q and TNF related 325991709959939519Rat
3048Amacralpha-methylacyl-CoA racemase25994615859958255Rat
1306690Slc45a2solute carrier family 45, member 225996359959996408Rat
1311550Rxfp3relaxin family peptide receptor 326000325660004686Rat
41324318LOC120100741uncharacterized LOC12010074126001648260032748Rat
1307323Adamts12ADAM metallopeptidase with thrombospondin type 1 motif, 1226003287360327629Rat
41066036LOC120101289small nucleolar RNA SNORA1726034044160340572Rat
1359527Tars1threonyl-tRNA synthetase 126036825160387733Rat
1592966LOC680363hypothetical protein LOC68036326045263060453393Rat
1565852LOC499541LRRGT0004526066714160673354Rat
1594163LOC680268hypothetical protein LOC68026826066996860670245Rat
1563766LOC499542LRRGT0017826072684860735185Rat
11511747LOC108350170glyceraldehyde-3-phosphate dehydrogenase pseudogene26084791860848940Rat
3196Npr3natriuretic peptide receptor 326086548360933432Rat
1560001LOC499544LRRGT0015426097731561004442Rat
621582Sub1SUB1 regulator of transcription26100564661020486Rat
41191856LOC120101085uncharacterized LOC12010108526102048861021424Rat
41054385LOC120101168U6 spliceosomal RNA26108224061082346Rat
1311890Zfrzinc finger RNA binding protein26113761161200322Rat
1307902Mtmr12myotubularin related protein 1226122371461293266Rat
40962450LOC120101086uncharacterized LOC12010108626132407061330556Rat
621226Golph3golgi phosphoprotein 326134803061376051Rat
619958Pdzd2PDZ domain containing 226138461461770516Rat
2324713LOC100363177ferritin light chain 1-like26154356361544581Rat
6504200LOC100909396uncharacterized LOC10090939626182809661830209Rat
1306502RGD1306502similar to hypothetical protein FLJ1119326184871661864762Rat
1307626Droshadrosha ribonuclease III26186488661976688Rat
9362373LOC103695100uncharacterized LOC10369510026207365762085399Rat
2322Cdh6cadherin 626207913962225228Rat
11493630LOC10835017160S ribosomal protein L7a pseudogene26242432862430752Rat
11453461LOC108350230glyceraldehyde-3-phosphate dehydrogenase pseudogene26273716662738204Rat
41024443LOC120101173U6 spliceosomal RNA26280651762806619Rat
2323519LOC100359721hypothetical LOC10035972126359223363595295Rat
2323466LOC100359774hypothetical LOC10035977426393638763937165Rat
6492359LOC100911520killer cell lectin-like receptor 5-like26421267264217862Rat
41231663LOC120100995dipeptidyl peptidase 3-like26429759364432049Rat
41232314LOC12010099660S ribosomal protein L13-like26459573764596270Rat
41196986LOC120101348small nucleolar RNA SNORA1726516063165160712Rat
40995943LOC120100742uncharacterized LOC12010074226558793765606771Rat
1585807LOC680982hypothetical protein LOC68098226567090865672736Rat
7662910LOC102552232uncharacterized LOC10255223226576716665819676Rat
1564125RGD1564125similar to Cln5 protein26589349565902741Rat
41294127LOC120100743ubiquitin-associated protein 2-like26600528266007542Rat
2322932LOC100360013ubiquitin-associated protein 226600754266009900Rat
1308343Cdh9cadherin 926628042266367121Rat
1583588LOC681102similar to synaptosomal-associated protein 23 isoform SNAP23B26760413067609584Rat
40994990LOC120100997protein crumbs homolog 3-like26800073868003782Rat
41357925LOC12010099860S ribosomal protein L6-like26813098468132284Rat
41250842LOC120100745uncharacterized LOC12010074526853932368628612Rat
619741Cdh10cadherin 1026862862368850995Rat
41337724LOC120100746uncharacterized LOC12010074626865085668670949Rat
41335676LOC120100744serine hydrolase RBBP9-like26867700268677554Rat
7505957LOC102553625uncharacterized LOC10255362526877889068939928Rat
7662935LOC102553734uncharacterized LOC10255373426898029469020038Rat
41135571LOC120100560uncharacterized LOC12010056026902009469020818Rat
1593220LOC365709similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin e126941461569417238Rat
1586190LOC294831similar to ubiquitin-conjugating enzyme E2R 226955210069554245Rat
41384167LOC120100561ubiquitin-conjugating enzyme E2 N-like26977182569772236Rat
41123498LOC120101245small nucleolar RNA SNORA4427044660770446735Rat
1566350Cdh12cadherin 1227047467971705369Rat
41403201LOC120101087uncharacterized LOC12010108727050893070511875Rat
41102832LOC120101346small nucleolar RNA SNORA1727094241070942533Rat
1562936RGD1562936similar to Heat shock protein HSP 90-beta (HSP 84)27212525172129162Rat
41400978LOC120100747uncharacterized LOC12010074727214718872156686Rat
7655727LOC102554147uncharacterized LOC10255414727215668172198344Rat
1305430Cdh18cadherin 1827281807673820144Rat
41287396NEWGENE_40933816transfer RNA valine (anticodon AAC)27284242772842507Rat
1561906RGD1561906similar to RIKEN cDNA 4930430F0827298438872986671Rat
7667725LOC102554526heterogeneous nuclear ribonucleoprotein A3-like27324733073249760Rat
41180045LOC120101302small nucleolar RNA SNORA1727347496673475097Rat
1596656LOC682635similar to CG31855-PA27382393973841395Rat
41261285LOC120101395U1 spliceosomal RNA27406126874061423Rat
41315512LOC120100562RNA-binding protein FUS-like27413938274141230Rat
41237332LOC120101366U1 spliceosomal RNA27426084874261011Rat
1583285Hspd1-ps25heat shock protein 1, pseudogene 2527460975074613329Rat
11445903LOC108350231uncharacterized LOC10835023127481003074811049Rat
9429209LOC103691486uncharacterized LOC10369148627481148974842763Rat
7523639LOC102554929uncharacterized LOC10255492927510102975109556Rat
41230892LOC120101390U1 spliceosomal RNA27517905275179214Rat
41206868LOC120100999glyceraldehyde-3-phosphate dehydrogenase-like27533303175333975Rat
41232980LOC120100748uncharacterized LOC12010074827537125875412938Rat
41178063LOC12010056360S ribosomal protein L7a-like27551842375523313Rat
621491Basp1brain abundant, membrane attached signal protein 127581613075863801Rat
11386721LOC108350173charged multivesicular body protein 5 pseudogene27598867576005457Rat
1589753LOC310177similar to RIKEN cDNA 0610040D2027601663676017401Rat
1307193Myo10myosin X27610096276304164Rat
41173629LOC120100749uncharacterized LOC12010074927631401276334295Rat
11403233LOC108349968uncharacterized LOC10834996827632408476333964Rat
1565003Retreg1reticulophagy regulator 127633560976474817Rat
11359058LOC10834996760S ribosomal protein L7a pseudogene27636625476367092Rat
2318290LOC100362397ubiquitin-conjugating enzyme E2L 3-like27644003676441113Rat
1309146Zfp622zinc finger protein 62227647960576494405Rat
6494071LOC100911298heterogeneous nuclear ribonucleoprotein M-like27649878076500974Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
35272D2Rat1914025760561257605741Ratregion
5074990RH13833515525770179157701946Ratregion
5077058RH13953519125775567757755868Ratregion
5078486RH14037013125775574457755875Ratregion
5090727AU04992722825776599157766219Ratregion
5500362GDB:33540916925776772057767887Ratregion
5054873RH14347421825778815057788368Ratregion
5027483AI5042999225780811557808207Ratregion
1632178D2Got31222425785740057857624Ratregion
5501460D9S5527025797253357972803Ratregion
5059950BF38820419325808475558084948Ratregion
5075578RH13867512125815914658159267Ratregion
5041370RH12881818425816131258161496Ratregion
5055103RH14360726325816172358161986Ratregion
5039610RH12780418025825119158251371Ratregion
5051553AW12520510525841458658414691Ratregion
67257D2Arb828025842920558429485Ratregion
5029953BF40012520025866911958669319Ratregion
1628202D2Wox2913625875755058757686Ratregion
5504857ha260088825878094258781904Ratregion
5069770AU02885912625885980358859929Ratregion
66537D12Uia227025917270459172974Ratregion
1578947D2Chm28022125917985359180074Ratregion
5088060Prlr13525929089759291032Ratregion
7192180Prlr12025930626159306381Ratregion
42119D2Arb633525932430759324662Ratregion
11156D2Mit2431025932437759324691Ratregion
11155D2Wox1418225932445459324636Ratregion
5039408RH12768919025937769459377884Ratregion
5506029NM_1942839325941952659419619Ratregion
39046D2Rat17522325943983459440061Ratregion
5047226RH13220620925945066759450875Ratregion
5077360RH13971218125945187859452059Ratregion
5049412RH13346621525946897459469476Ratregion
5035542Mrpl40025947112759471615Ratregion
5048002RH13265220325954642859546631Ratregion
39170D2Rat17418225974481759745001Ratregion
5046154RH13158918825975390459754092Ratregion
1632808D2Ulb714925979644859796597Ratregion
5089181AU04900316125985060859850769Ratregion
5089261AU04905118125994321459943395Ratregion
36850D2Rat2016025994328659943463Ratregion
5038880RH12738621925995793659958155Ratregion
1636242D2Got38027725996340259963675Ratregion
1629043D2Got31617725996910259969279Ratregion
1637376D2Got31510726027751160277618Ratregion
42576D2Rat27114526030523460305371Ratregion
67827D2Uwm2910726073165260731732Ratregion
5071086RH13487821526086810960868324Ratregion
5043490RH13005521826088913460889352Ratregion
5504480PMC22098P152226093092960931451Ratregion
5035787PMC17879P158326093163460932217Ratregion
5040252RH12817721726100573261005947Ratregion
5054285RH14313621126100731961007530Ratregion
1628294D2Got40119426110233161102520Ratregion
1630974D2Got31411926111683761116951Ratregion
5065292BE12139717426113401361134187Ratregion
5025710RH12936120326119980461200010Ratregion
5047932RH13261220626129283261293038Ratregion
33824D2Mit418826158212361582311Ratregion
42577D2Rat32020726185874561858937Ratregion
67749D2Uwm3022626198885061989099Ratregion
5037031AU04998217126202042162020592Ratregion
5070984RH13481919726207501062075207Ratregion
5053137RH14247529226207567362075965Ratregion
1627859D2Got39728626244281862443104Ratregion
34487D2Mgh330426251660962516896Ratregion
5078624RH14045113926271483462714974Ratregion
5066584AU04827117726340346163403638Ratregion
5069754AU02910912126352924663529367Ratregion
40470D2Rat29917026353190063532066Ratregion
1635435D2Got31711826358755263587670Ratregion
5036761AU04911917026382061163820781Ratregion
1632736D2Got32014726404621364046360Ratregion
1633230D2Got31922226443107164431288Ratregion
42117D2Arb4223026499184564992091Ratregion
5076898RH13944315426566903865669208Ratregion
33739D2Mit531826611827566118463Ratregion
43500D2Got18314426630034766300491Ratregion
1579111D2Chm29424126771746367717704Ratregion
5039928RH12798820426793187467932078Ratregion
5039928RH12798820426793187467932078Ratregion
5052565AA58950825926793198967932248Ratregion
5052565AA58950825926793198967932248Ratregion
66432D9Mco728526844340268443753Ratregion
35142D2Rat2212726846286068462973Ratregion
5062274BE10646418426849729068497474Ratregion
41188D2Rat20622226864256868642799Ratregion
60324D2Got4719126898344468983634Ratregion
36017D2Rat7413026917384469173974Ratregion
5078262RH14023718426924979369249977Ratregion
43501D2Got4421327036780870368021Ratregion
5082003BF40902014427170279471702938Ratregion
44552D9Wox2113627196810571968162Ratregion
5088221AU04843918027246975972469939Ratregion
1578914D2Chm29624427255502672555272Ratregion
40074D2Rat20713727305587573056016Ratregion
42578D2Rat32223927324535973245596Ratregion
42579D2Rat32320727355816973558384Ratregion
1579114D2Chm29924227374444373744685Ratregion
10319D2Mco4121227381172573811941Ratregion
42287D2Rat37120727387824373878442Ratregion
5502415RH124784027424650474246699Ratregion
5080072RH14136718127424652074246703Ratregion
5067508AU04770217327429776074297933Ratregion
40560D2Rat27316327441756774417754Ratregion
35643D2Rat2111327478666474786777Ratregion
66659D2Mco1714327499775974997963Ratregion
43513D2Got4019727508870075088897Ratregion
5053403RH14262810027544081275440912Ratregion
1636921D2Got32110727548631975486426Ratregion
43494D2Got3210527548632275486427Ratregion
41000D2Rat20314927585924275859387Ratregion
5070814RH13472118727586425875864445Ratregion
60320D2Got3413027590413575904265Ratregion
5506789G4539624027596796975968209Ratregion
5065696BF40622711327600831376008426Ratregion
5079442RH14100020727601672176017269Ratregion
5078078RH14013122027601708576017305Ratregion
5033095RH13757517127612891976129090Ratregion
39828D2Rat20423527613654776136768Ratregion
5502801MYO1013627629371776293853Ratregion
5032475D15Ertd600e20627630395576304161Ratregion
5051000RH13438020527630980976310014Ratregion
5047450RH13233518927633667776336866Ratregion
5055501RH14383811527647337576473490Ratregion
5028735STS-AA00978116027649421376494373Ratregion
33620D2Mit618927653932276539510Ratregion
7191218D2Mit618927653932276539510Ratregion
Position Markers

Flank 1: (D2Rat19)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2257,605,612 - 57,605,741 (+)MAPPER
Rnor_6.0257,715,603 - 57,715,731NCBI
Rnor_5.0279,200,355 - 79,200,483UniSTS
RGSC_v3.4258,117,458 - 58,117,586UniSTS
RGSC_v3.4258,117,457 - 58,117,586RGD
RGSC_v3.1258,045,691 - 58,045,819RGD
Celera253,219,155 - 53,219,283UniSTS
RH 3.4 Map2333.2RGD
RH 3.4 Map2333.2UniSTS
RH 2.0 Map2321.6RGD
SHRSP x BN Map225.2298RGD
Peak: (D2Rat19)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2257,605,612 - 57,605,741 (+)MAPPER
Rnor_6.0257,715,603 - 57,715,731NCBI
Rnor_5.0279,200,355 - 79,200,483UniSTS
RGSC_v3.4258,117,458 - 58,117,586UniSTS
RGSC_v3.4258,117,457 - 58,117,586RGD
RGSC_v3.1258,045,691 - 58,045,819RGD
Celera253,219,155 - 53,219,283UniSTS
RH 3.4 Map2333.2RGD
RH 3.4 Map2333.2UniSTS
RH 2.0 Map2321.6RGD
SHRSP x BN Map225.2298RGD
Flank 2: (D2Mit6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2276,539,322 - 76,539,510 (+)MAPPER
Rnor_6.0278,466,075 - 78,466,260RGD
Rnor_6.0278,321,410 - 78,321,595RGD
Rnor_5.0298,153,283 - 98,153,468RGD
Rnor_5.0298,037,122 - 98,037,307RGD
RGSC_v3.4277,630,629 - 77,630,814UniSTS
RGSC_v3.1277,561,812 - 77,562,125RGD
Celera272,243,967 - 72,244,152UniSTS
RH 3.4 Map2500.7RGD
RH 3.4 Map2500.7UniSTS
RH 2.0 Map2406.8RGD
SHRSP x BN Map229.4498RGD
Cytogenetic Map2 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22066244865662448Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22490385374786777Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22691781781754745Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22715716072157160Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23513484188029593Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240067944102785628Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24280460760653831Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243154682202446871Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243162366111362592Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24317101783575226Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
1354592Rf50Renal function QTL 503.5urine output (VT:0003620)timed urine volume (CMO:0000260)25382274774786777Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
1579916Bp270Blood pressure QTL 2700.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)25653191259324719Rat
6480225Gdil1Gastrointestinal dilation QTL 1enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)25666087974786777Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)25760561276539510Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)259134147127460910Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)259324377103795077Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)259324377103795077Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)259324377141596857Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)259324719102755241Rat
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)259846005104846005Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)264366971109366971Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)267942638112942638Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)272532993157142209Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)27478666494359546Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)27478666494359546Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)27653932277991361Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)276539322102785628Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)diastolic blood pressure (CMO:0000005)276539322102785628Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)276539322150540526Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general these rats were on a high sucrose diet (HSD; 70% calories as sucrose) for 1 week; while still on sucrose diet, dexamethasone (DEX) was given in drinking water (0.026mg/ml) for 3 days then these animals were killed and the heart was weighed 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test 1580752