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Gene: Sub1 (SUB1 regulator of transcription) Rattus norvegicus
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Symbol: Sub1
Name: SUB1 regulator of transcription
Description: Predicted to have DNA binding activity; identical protein binding activity; and transcription coactivator activity. Predicted to be involved in SMAD protein signal transduction; negative regulation of DNA metabolic process; and positive regulation of transcription initiation from RNA polymerase II promoter. Localizes to nucleus. Orthologous to human SUB1 (SUB1 regulator of transcription); PARTICIPATES IN RNA polymerase III transcription pathway; INTERACTS WITH 17alpha-ethynylestradiol; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: activated RNA polymerase II transcriptional coactivator p15; Loc192269; MGC109653; p14; PC4; positive cofactor 4; pR-ET2 encoded oncodevelopmental protein; RNA polymerase II transcriptional coactivator; Rpo2tc1; SUB1 homolog; SUB1 homolog (S. cerevisiae); SUB1 homolog, transcriptional regulator
Orthologs:
Homo sapiens (human) : SUB1 (SUB1 regulator of transcription)  HGNC  Alliance
Mus musculus (house mouse) : Sub1 (SUB1 homolog, transcriptional regulator)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sub1 (SUB1 regulator of transcription)
Pan paniscus (bonobo/pygmy chimpanzee) : SUB1 (SUB1 regulator of transcription)
Canis lupus familiaris (dog) : SUB1 (SUB1 regulator of transcription)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sub1 (SUB1 regulator of transcription)
Sus scrofa (pig) : SUB1 (SUB1 regulator of transcription)
Chlorocebus sabaeus (African green monkey) : SUB1 (SUB1 regulator of transcription)
Heterocephalus glaber (naked mole-rat) : Sub1 (SUB1 regulator of transcription)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0262,019,902 - 62,034,704 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl262,022,567 - 62,034,628 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0282,656,079 - 82,670,881 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4261,418,076 - 61,430,139 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1261,346,310 - 61,356,225 (-)NCBI
Celera257,672,589 - 57,684,652 (+)NCBICelera
Cytogenetic Map2q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sub1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621582
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-05-05
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.