Gene: Cdh6 (cadherin 6) Rattus norvegicus
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Symbol: Cdh6
Name: cadherin 6
Description: ENCODES a protein that exhibits calcium ion binding (inferred); INVOLVED IN female gonad development; Notch signaling pathway (ortholog); ASSOCIATED WITH Cachexia (ortholog); FOUND IN plasma membrane (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; alendronic acid
AGR Description: Predicted to have several functions, including cadherin binding activity, calcium ion binding activity, and cytoskeletal protein binding activity; involved in female gonad development; predicted to localize to the catenin complex, cell surface, and cell-cell adherens junction; orthologous to human CDH6 (cadherin 6).
Merged Description: Predicted to have several functions, including cadherin binding activity, calcium ion binding activity, and cytoskeletal protein binding activity; involved in female gonad development; predicted to localize to the catenin complex, cell surface, and cell-cell adherens junction; orthologous to human CDH6 (cadherin 6); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; alendronic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Cadherin 6 (K-cadherin); cadherin 6, type 2, K-cadherin; cadherin-6; K-cadherin; KCAD; kidney cadherin
Orthologs:
Homo sapiens (human) : CDH6 (cadherin 6)  HGNC  Alliance
Mus musculus (house mouse) : Cdh6 (cadherin 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdh6 (cadherin 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CDH6 (cadherin 6)
Canis lupus familiaris (dog) : CDH6 (cadherin 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdh6 (cadherin 6)
Sus scrofa (pig) : CDH6 (cadherin 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0263,100,723 - 63,246,618 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0281,448,794 - 81,594,432 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4262,547,961 - 62,703,034 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1262,476,190 - 62,631,267 (-)NCBI
Celera256,475,456 - 56,620,253 (+)NCBICelera
Cytogenetic Map2q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cdh6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2322
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.