D2Rat322 Marker Search Result - Rat Genome Database

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Marker: D2Rat322

Symbol: D2Rat322
Previously known as: oxsts10582; R0313-D02; 
RGD ID: 42578
Expected Size: 237 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8274,975,948 - 74,976,185 (+)Marker Load Pipeline
mRatBN7.2273,245,359 - 73,245,596 (+)MAPPERmRatBN7.2
Rnor_6.0274,089,230 - 74,089,466NCBIRnor6.0
Rnor_5.0293,825,189 - 93,825,425UniSTSRnor5.0
RGSC_v3.4274,203,526 - 74,203,763RGDRGSC3.4
RGSC_v3.4274,203,527 - 74,203,763UniSTSRGSC3.4
RGSC_v3.1274,131,465 - 74,132,067RGD
Celera269,018,259 - 69,018,495UniSTS
SHRSP x BN Map229.1898UniSTS
SHRSP x BN Map229.1898RGD
Cytogenetic Map2q22UniSTS
Is Marker For: Genes:   Cdh18  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines


 
Forward Primer TGATTTCCACTTATGTGCCA
Reverse Primer GCATCTGGGCATGACTCATA
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1305430Cdh18cadherin 1827281807673820144Rat
GenBank Nucleotide JH613366.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 50 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)259846005104846005Rat
6480225Gdil1Gastrointestinal dilation QTL 1enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)25666087974786777Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)243162366111362592Rat
152025242Bw191Body weight QTL 1913.62body mass (VT:0001259)238573329122609194Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat

1 to 10 of 50 rows


Database
Acc Id
Source(s)
NCBI Gene 310174 UniSTS