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Gene: Pdzd2 (PDZ domain containing 2) Rattus norvegicus
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Symbol: Pdzd2
Name: PDZ domain containing 2
Description: Predicted to be involved in intracellular signal transduction. Localizes to several cellular components, including the cell-cell junction; endoplasmic reticulum; and postsynaptic density. Orthologous to human PDZD2 (PDZ domain containing 2); INTERACTS WITH 2,6-dinitrotoluene; 3,3',4,4',5-pentachlorobiphenyl; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Papin; PDZ domain containing 3; PDZ domain-containing protein 2; PDZ domain-containing protein 3; Pdzk3; plakophilin-related armadillo repeat protein-interacting PDZ protein
Orthologs:
Homo sapiens (human) : PDZD2 (PDZ domain containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Pdzd2 (PDZ domain containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdzd2 (PDZ domain containing 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PDZD2 (PDZ domain containing 2)
Canis lupus familiaris (dog) : PDZD2 (PDZ domain containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdzd2 (PDZ domain containing 2)
Sus scrofa (pig) : PDZD2 (PDZ domain containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly; Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0262,399,748 - 62,520,448 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl262,399,748 - 62,634,785 (-)Ensembl
Rnor_5.0282,168,243 - 82,288,609 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4261,828,127 - 61,953,671 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1261,756,359 - 61,864,415 (-)NCBI
Celera257,076,815 - 57,309,194 (+)NCBICelera
Cytogenetic Map2q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdzd2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619958
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.