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Gene: Akna (AT-hook transcription factor) Rattus norvegicus
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Symbol: Akna
Name: AT-hook transcription factor
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to the centrosome; cytosol; and nucleus. Orthologous to human AKNA (AT-hook transcription factor); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AT-hook-containing transcription factor; LOC362530
Orthologs:
Homo sapiens (human) : AKNA (AT-hook transcription factor)  HGNC  Alliance
Mus musculus (house mouse) : Akna (AT-hook transcription factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Akna (AT-hook transcription factor)
Pan paniscus (bonobo/pygmy chimpanzee) : AKNA (AT-hook transcription factor)
Canis lupus familiaris (dog) : AKNA (AT-hook transcription factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Akna (AT-hook transcription factor)
Sus scrofa (pig) : AKNA (AT-hook transcription factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0579,184,087 - 79,232,370 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0583,298,321 - 83,345,221 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4580,329,462 - 80,368,061 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1580,335,469 - 80,367,838 (-)NCBI
Celera575,711,329 - 75,749,931 (-)NCBICelera
Cytogenetic Map5q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Akna
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308202
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.