Gene: Smarca1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1) Rattus norvegicus
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Symbol: Smarca1
Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
Description: ENCODES a protein that exhibits annealing helicase activity (ortholog); DNA-dependent ATPase activity (ortholog); nucleosome-dependent ATPase activity (ortholog); INVOLVED IN ATP-dependent chromatin remodeling (ortholog); brain development (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); oculocerebrorenal syndrome (ortholog); FOUND IN CERF complex (ortholog); intracellular membrane-bounded organelle (ortholog); nuclear chromatin (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2-methoxyethanol; 6-propyl-2-thiouracil
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC317575; probable global transcription activator SNF2L1; RGD1561046; similar to Smarca1 protein
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X134,634,651 - 134,719,503 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X134,707,434 - 134,791,566 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X134,177,345 - 134,249,029 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX125,946,308 - 126,012,001 (-)NCBICelera
Cytogenetic MapXq35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smarca1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561046
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE