Gene: Atoh1 (atonal bHLH transcription factor 1) Rattus norvegicus
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Symbol: Atoh1
Name: atonal bHLH transcription factor 1
Description: ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN auditory receptor cell fate determination (ortholog); auditory receptor cell fate specification (ortholog); axon guidance (ortholog); ASSOCIATED WITH medulloblastoma (ortholog); FOUND IN nucleus (ortholog); INTERACTS WITH 2,2',4,4',5,5'-hexachlorobiphenyl; 6-propyl-2-thiouracil; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: atonal homolog 1; atonal homolog 1 (Drosophila); LOC500156; RGD1565171; similar to MATH-1 protein
Orthologs:
Homo sapiens (human) : ATOH1 (atonal bHLH transcription factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Atoh1 (atonal bHLH transcription factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atoh1 (atonal bHLH transcription factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATOH1 (atonal bHLH transcription factor 1)
Canis lupus familiaris (dog) : ATOH1 (atonal bHLH transcription factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atoh1 (atonal bHLH transcription factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0495,498,003 - 95,500,098 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04160,284,441 - 160,286,536 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4494,109,650 - 94,111,745 (+)NCBIRGSC3.4rn4RGSC3.4
Celera488,659,055 - 88,661,150 (+)NCBICelera
Cytogenetic Map4q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atoh1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565171
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2018-11-20
Status: ACTIVE