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Gene: Cdon (cell adhesion associated, oncogene regulated) Rattus norvegicus

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Symbol:

Cdon

Name:

cell adhesion associated, oncogene regulated

RGD ID:

708433

Description:

Predicted to enable coreceptor activity. Involved in cell adhesion. Acts upstream of or within smoothened signaling pathway. Located in cell surface. Human ortholog(s) of this gene implicated in holoprosencephaly 11. Orthologous to human CDON (cell adhesion associated, oncogene regulated); PARTICIPATES IN Hedgehog signaling pathway; p38 MAPK signaling pathway; INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Cdo; Cdon homolog; Cdon homolog (mouse); cell adhesion molecule-related/down-regulated by oncogenes; immunoglobulin superfamily member

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	42,032,921 - 42,119,451 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	42,033,042 - 42,119,345 (+)	Ensembl				GRCr8
mRatBN7.2	8	33,775,123 - 33,861,635 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	33,806,183 - 33,859,033 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	37,882,852 - 37,935,670 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	36,165,909 - 36,218,724 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	34,028,733 - 34,081,547 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	36,625,757 - 36,712,091 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	36,625,733 - 36,710,949 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	36,642,905 - 36,728,577 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	35,238,899 - 35,291,743 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	35,227,303 - 35,280,140 (+)	NCBI		Celera
RGSC_v3.1	8	35,247,664 - 35,300,509 (+)	NCBI
Cytogenetic Map	8	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

coloboma (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

holoprosencephaly (ISO)

holoprosencephaly 1 (ISO)

holoprosencephaly 11 (ISO,ISS)

microcephaly (ISO)

Pituitary Stalk Interruption Syndrome (ISO)

Precocious Puberty (ISO)

septooptic dysplasia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,4'-trichlorobiphenyl (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

8-Br-cAMP (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

ammonium chloride (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (EXP)

bisphenol F (ISO)

C60 fullerene (EXP)

carbamazepine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

copper atom (ISO)

copper(0) (ISO)

decabromodiphenyl ether (EXP)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

flavonoids (EXP)

fluoranthene (ISO)

gentamycin (EXP)

indometacin (ISO)

irinotecan (ISO)

lead diacetate (ISO)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

nickel atom (ISO)

panobinostat (ISO)

paracetamol (EXP)

PCB138 (ISO)

perfluorooctanoic acid (EXP)

phenylmercury acetate (ISO)

potassium chromate (ISO)

raloxifene (ISO)

rotenone (ISO)

S-nitrosoglutathione (ISO)

SB 203580 (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

testosterone (ISO)

thioacetamide (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

triptonide (ISO)

trovafloxacin (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anterior/posterior pattern specification (IEA,ISO)

cell adhesion (IEA,IMP)

cell fate specification (IEA,ISO)

cell-cell adhesion (IBA)

cellular response to vitamin D (IEA,ISO)

central nervous system neuron differentiation (IEA)

cerebral cortex development (IEA,ISO)

embryonic body morphogenesis (IEA,ISO)

embryonic morphogenesis (IEA,ISO)

embryonic retina morphogenesis in camera-type eye (IEA,ISO)

lens development in camera-type eye (IEA,ISO)

myoblast fusion (IEA,ISO)

negative regulation of biomineral tissue development (IEA,ISO)

negative regulation of canonical Wnt signaling pathway (IEA,ISO)

nervous system development (IBA)

neural precursor cell proliferation (IEA)

neuroblast proliferation (IEA)

neuron differentiation (IEA)

positive regulation of MAPK cascade (IEA,ISO)

positive regulation of neural precursor cell proliferation (ISO)

positive regulation of neuroblast proliferation (IEA)

positive regulation of neuron differentiation (IEA,ISO)

positive regulation of protein phosphorylation (ISO)

positive regulation of skeletal muscle tissue development (IEA,ISO)

positive regulation of small GTPase mediated signal transduction (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of neuron differentiation (IEA,ISO)

skeletal muscle satellite cell differentiation (IEA,ISO)

skeletal muscle tissue development (IEA)

smoothened signaling pathway (IDA,IEA,ISO)

striated muscle cell differentiation (IEA,ISO)

Cellular Component

cell surface (IDA)

plasma membrane (IEA)

Molecular Function

coreceptor activity (IEA,ISO)

protein binding (IPI,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Hedgehog signaling pathway (ISO)

p38 MAPK signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Mutations in CDON, encoding a hedgehog receptor, result in holoprosencephaly and defective interactions with other hedgehog receptors.	Bae GU, etal., Am J Hum Genet. 2011 Aug 12;89(2):231-40. doi: 10.1016/j.ajhg.2011.07.001. Epub 2011 Jul 28.
2.	Cdo binds Abl to promote p38alpha/beta mitogen-activated protein kinase activity and myogenic differentiation.	Bae GU, etal., Mol Cell Biol. 2009 Aug;29(15):4130-43. doi: 10.1128/MCB.00199-09. Epub 2009 May 26.
3.	Interactions between Hedgehog proteins and their binding partners come into view.	Beachy PA, etal., Genes Dev. 2010 Sep 15;24(18):2001-12.
4.	Mechanisms and functions of p38 MAPK signalling.	Cuadrado A and Nebreda AR, Biochem J. 2010 Aug 1;429(3):403-17. doi: 10.1042/BJ20100323.
5.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6.	Prenatal ethanol exposure in mice phenocopies Cdon mutation by impeding Shh function in the etiology of optic nerve hypoplasia.	Kahn BM, etal., Dis Model Mech. 2017 Jan 1;10(1):29-37. doi: 10.1242/dmm.026195. Epub 2016 Nov 24.
7.	CDO: an oncogene-, serum-, and anchorage-regulated member of the Ig/fibronectin type III repeat family.	Kang JS, etal., J Cell Biol 1997 Jul 14;138(1):203-13.
8.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
9.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
10.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
11.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
13.	Comprehensive gene review and curation	RGD comprehensive gene curation
14.	Triphalangeal thumb-polysyndactyly syndrome and syndactyly type IV are caused by genomic duplications involving the long range, limb-specific SHH enhancer.	Sun M, etal., J Med Genet. 2008 Sep;45(9):589-95. doi: 10.1136/jmg.2008.057646. Epub 2008 Apr 16.
15.	Cdo functions at multiple points in the Sonic Hedgehog pathway, and Cdo-deficient mice accurately model human holoprosencephaly.	Zhang W, etal., Dev Cell. 2006 May;10(5):657-65. Epub 2006 Apr 27.

Additional References at PubMed

PMID:15520228	PMID:15572127	PMID:16647304	PMID:16648472	PMID:17504941	PMID:19244314	PMID:19754878	PMID:20160094

Genomics

Comparative Map Data

Cdon
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	42,032,921 - 42,119,451 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	42,033,042 - 42,119,345 (+)	Ensembl				GRCr8
mRatBN7.2	8	33,775,123 - 33,861,635 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	33,806,183 - 33,859,033 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	37,882,852 - 37,935,670 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	36,165,909 - 36,218,724 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	34,028,733 - 34,081,547 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	36,625,757 - 36,712,091 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	36,625,733 - 36,710,949 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	36,642,905 - 36,728,577 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	35,238,899 - 35,291,743 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	35,227,303 - 35,280,140 (+)	NCBI		Celera
RGSC_v3.1	8	35,247,664 - 35,300,509 (+)	NCBI
Cytogenetic Map	8	q21	NCBI

CDON
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	125,956,821 - 126,063,335 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	125,955,796 - 126,063,335 (-)	Ensembl			hg38	GRCh38
GRCh37	11	125,826,716 - 125,933,187 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	125,331,923 - 125,438,397 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	125,335,783 - 125,438,397	NCBI
Celera	11	122,988,054 - 123,098,575 (-)	NCBI		Celera
Cytogenetic Map	11	q24.2	NCBI
HuRef	11	121,768,684 - 121,875,085 (-)	NCBI		HuRef
CHM1_1	11	125,713,444 - 125,819,847 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	125,985,675 - 126,092,146 (-)	NCBI		T2T-CHM13v2.0

Cdon
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	35,332,836 - 35,418,948 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	35,332,424 - 35,418,948 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	35,421,528 - 35,507,652 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	35,421,128 - 35,507,652 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	35,259,661 - 35,315,237 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	35,201,747 - 35,254,013 (+)	NCBI		MGSCv36	mm8
Celera	9	32,686,755 - 32,744,725 (+)	NCBI		Celera
Cytogenetic Map	9	A4	NCBI
cM Map	9	20.24	NCBI

Cdon
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	27,003,919 - 27,065,989 (-)	Ensembl
ChiLan1.0	NW_004955412	27,004,391 - 27,093,968 (-)	NCBI	ChiLan1.0	ChiLan1.0

CDON
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	126,641,095 - 126,746,315 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	127,750,426 - 127,853,585 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	120,772,160 - 120,877,529 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	124,685,084 - 124,789,649 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	124,685,084 - 124,786,091 (-)	Ensembl			panPan2	panpan1.1

CDON
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	8,439,606 - 8,536,088 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	8,446,346 - 8,533,426 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	8,496,514 - 8,595,988 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	8,391,957 - 8,491,851 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	8,391,716 - 8,489,974 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	8,460,126 - 8,560,018 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	8,434,443 - 8,534,264 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	8,468,718 - 8,568,231 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cdon
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	108,178,109 - 108,358,526 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936572	6,176,255 - 6,272,260 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936572	6,176,267 - 6,268,885 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CDON
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	53,079,550 - 53,178,881 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	53,079,543 - 53,178,881 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CDON
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	117,091,778 - 117,255,354 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	117,092,178 - 117,152,030 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	8,742,602 - 8,983,460 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cdon
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624812	109,405 - 203,519 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624812	107,632 - 203,791 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cdon
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	30,961,969 - 31,048,020 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cdon
578 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	420
Count of miRNA genes:	196
Interacting mature miRNAs:	232
Transcripts:	ENSRNOT00000016248, ENSRNOT00000065358
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357398	Slep3	Serum leptin concentration QTL 3	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
2313057	Bss76	Bone structure and strength QTL 76	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	8	39106258	91341052	Rat
1298065	Scl16	Serum cholesterol level QTL 16	3.8		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39752803	84752803	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
2313067	Bss77	Bone structure and strength QTL 77	3.1	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	8	39106258	91341052	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
2317032	Ginf2	Gastrointestinal inflammation QTL 2	3.21	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	8	12964165	57964165	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	15952279	60952279	Rat
11556286	Cm81	Cardiac mass QTL 81		0.01	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	39106258	84106258	Rat
2317036	Livw3	Liver weight QTL 3	2.43	0.01	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	8	12964165	57964165	Rat
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	10382540	55382540	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	10382540	55382540	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
61337	Bp22	Blood pressure QTL 22	5.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	51589833	Rat
2317048	Ginf1	Gastrointestinal inflammation QTL 1	3.52	0.005	cecum mucosa thickness (VT:0010234)	enterocolitis severity score (CMO:0002138)	8	12964165	57964165	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	10382540	55382540	Rat
2313088	Bss75	Bone structure and strength QTL 75	3.1	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	8	39106258	91341052	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
2302278	Gluco36	Glucose level QTL 36	4.2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	8	37760859	58991895	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	10382540	55382540	Rat
631648	Stl5	Serum triglyceride level QTL 5	4	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	35464071	71842899	Rat
724514	Uae15	Urinary albumin excretion QTL 15	2.9		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	37760859	61459705	Rat
61353	Bp35	Blood pressure QTL 35		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	8	39106258	84106258	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
1359033	Bp273	Blood pressure QTL 273			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	84106258	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
1331744	Bp217	Blood pressure QTL 217	3.398		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	67378345	Rat
2313046	Bss78	Bone structure and strength QTL 78	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	8	39106258	91341052	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
1359021	Bp271	Blood pressure QTL 271	1.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	34125902	55607752	Rat
2302367	Slep5	Serum leptin concentration QTL 5	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
70206	Alc20	Alcohol consumption QTL 20	2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	8	39106258	49610361	Rat

Markers in Region

AF090866

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	33,858,256 - 33,858,336 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	36,708,714 - 36,708,793	NCBI	Rnor6.0
Rnor_5.0	8	36,725,200 - 36,725,279	UniSTS	Rnor5.0
RGSC_v3.4	8	35,290,967 - 35,291,046	UniSTS	RGSC3.4
Celera	8	35,279,364 - 35,279,443	UniSTS
Cytogenetic Map	8	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	171	91	90	59	92	59	6	356	192	11	150	81	92	31	22	22

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_017358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242793	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005487905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC132671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF004840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016248 ⟹ ENSRNOP00000016247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	42,033,042 - 42,119,345 (+)	Ensembl
mRatBN7.2 Ensembl	8	33,806,183 - 33,859,033 (+)	Ensembl
Rnor_6.0 Ensembl	8	36,625,733 - 36,710,949 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103041 ⟹ ENSRNOP00000085481

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	42,033,042 - 42,119,345 (+)	Ensembl
mRatBN7.2 Ensembl	8	33,806,183 - 33,859,033 (+)	Ensembl

RefSeq Acc Id:

NM_017358 ⟹ NP_059054

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	42,064,002 - 42,116,850 (+)	NCBI
mRatBN7.2	8	33,806,183 - 33,859,033 (+)	NCBI
Rnor_6.0	8	36,656,644 - 36,709,490 (+)	NCBI
Rnor_5.0	8	36,642,905 - 36,728,577 (+)	NCBI
RGSC_v3.4	8	35,238,899 - 35,291,743 (+)	RGD
Celera	8	35,227,303 - 35,280,140 (+)	RGD

Sequence:

show sequence

TTCCCAGCCTACTTCTGTAATTGGGCGATATGCATCCAGACCTCGGACCCTTATGGAAACTGCT
GTATGTTCTTGTGATTCTGTGTTCTTCTGTGAGCTCAGACTTGGCAACTTATTTTATTTCTGAG
CCACTCTCTGCTGTCCAGAAGCTTGGCAGACCCGTGGTCCTACATTGTTCTGCTAAACCTGTTA
CTGCCCGAATCTCATGGTTGCATAATGGAAAACGATTGGACAGAAACACAGAACAGATAAAGAT
CCACCGGGGGACTTTGACCATTCTGTCTCTCAACCCTTCCCTTTCTGGTTGCTACCAGTGTGTG
GCCAACAACAGTGTTGGGGCTGTTGTCAGTGGCCCTGCCACAGTGTCCGCTGACGCCCTGGCTG
ATTTCGATTCATCAACAATGCATGTTATTACTGCAGAGAAGAAAAACACGGGTTTCATTGGCTG
CAGGGTACCTGAGAGTAACCCCAAAGCTGAGGTGCGCTACAAGATCCGGGGAAAGTGGCTGATG
TATTCCACAGGGAACTACATAATCCTTCCCTCAGGAAATCTTCAGATTTTGAATGTATCCTCGA
AGGATAAGGGATCGTACAAGTGTGCTGCCTATAATCCTGTCACCAGTGAACTGAAAGTTGAACC
CGCTGGCCGGAAGCTCCTTGTGAGTCGTCCTTCCTCGGATGGTTTTCACATTCTTCACCCTGCT
CTTTCTCAGGCATTAGCTGTCCTTCCGCACAGCCCTGTTACCTTGGAGTGTGTAGTGAGTGGGG
TCCCCGCCTCACAAGTGTATTGGCTGAAGGACGGGCAGGATTGCCTGTCAGGAAGCAACTGGAG
AAGGCTGTACTCTCACCTGGCCACAGCTAGCATCGACCCAGCGGATTCCGGGAACTATTCCTGT
GTGGTGGGCAACAACAGTTCCGGAGATGTTAAACACGTCACTTACACAGTCAACGTACTGGAGC
ACGCTTCAATTTCTAAAGGGCTGCACGATCAGAAGGTGTCCCTGGGGGCCACCGTACGTTTTAC
CTGCGAAGTTCACGGGAACCCAGCCCCCAACCGCACCTGGTTTCATAACGCACAGCCCATCCGC
CCCTCCTCACGGCATCTGACGGAAGGAAGTGTTCTGAAGATCACCGGGGTCATCATGGAGGATT
CTGGGTTGTATCAGTGCATGGCAGACAATGGGATTGGATTTATGCAATCTACTGGAAGACTTCA
AATTGAACAAGACAGTGGACAGAGGCCTGTCATAGTCACCGCCCCAGCAAACGTAGAGGTGACG
GACGGAGACTTCGTGACTTTGTCTTGCAATGCCACAGGAGAGCCTGTCCCGGTCATTCATTGGT
ACGGCCGCCATGGATTGATAACCAGCCATCCATCTCAGGTCCTTAGGTCCAAATCTCGAAAGTC
CCACCTCTTCCGACCTGGGGACCTGGACCCGGAGCCTGTCTACCTCATCATGTCCCAAGCGGGC
TCGAGCTCTCTGTCCATCCAGGCAGTGACTCGGGAGCATGCTGGGAAATACACTTGCGAAGCTG
TGAACAAACATGGCAGCACACAGTCAGAAGCGTTCCTCACAGTCGTTCCTTTTGAAACAAACAC
AAAGGCAGAGCCAGTCACACCCTCCGAAGCTTCTCAGAACGATGAACGAGACCCACGAGACGGT
TCAGAGTCCGGCTTGCTGAACTTGTTTCCAGTGAAGGTGCATTCCGGTGGAGTGGAATTGCCAG
CAGAGAAAAATGCCTCTGTCCCCGATGCTCCTAACATACTGAGCCCCCCACAGACCCACATGCC
AGACACATACACCCTGGTGTGGAGGACGGGGAGGGATGGCGGAATGCCCATCAACGCCTATTTC
GTGAAGTACCGAAAGCTGGACGACGGCAGTGGTGCGGTAGGCAGCTGGCACACGGTTCGCGTCC
CAGGGAGTGAGAGCGAGCTGCATCTAACCGAACTGGAGCCTTCAAGCCTTTATGAAGTTTTGAT
GGTGGCCAGAAGTGCAGTCGGCGAAGGACAGCCTGCCATGCTTACCTTCCGGACCAGCAAAGAA
AAGATGGCATCATCAAAAAACACCCAGGCGTCCTTTCCACCTGTGGGCATCCCTAAGCGGCCTG
TAACTTCGGAGGCTTCCAACAGCAATTTTGGAGTTGTGCTTACGGATTCCTCTAGGCATAGTGG
AGTCCCAGAGGCACCAGATCGACCTACTATCTCGATGGCATCGGAGACCTCAGTCTATGTCACC
TGGATTCCCCGTGCAAATGGCGGCTCTCCCATCACTGCCTTCAAGGTGGAATATAAGCGGATGA
AAAGTAGTGACTGGCTGGTGGCTGCTGAAGACATCCCTCCTTCCAAACTCTCTGTGGAAGTCCG
GAGTTTAGAGCCAGGTTCGATATACAAATTTAGGGTCATTGTTATCAACCATTACGGTGAGAGT
TTTCGGAGCTCGGCGTCCCGTCCCTACCAGGTGGCTGGTTTCCCAAATCGCTTTTCCAATCGCC
CCATAACTGGACCTCACATCGCATACACAGAGGCTGTCAGCGATACTCAGATCATGCTAAAATG
GACGTATATTCCATCAAGTAACAATAACACTCCCATTCAAGGATTCTATATCTATTACCGGCCA
ACAGACAGTGACAATGACAGTGATTACAAGAGGGATGTTGTGGAAGGTTCAAAGCAGTGGCACA
CCATTGGTCACCTGCAGCCAGAGACCTCCTATGACATTAAGATGCAGTGCTTTAATGAAGGAGG
AGAGAGCGAGTTCAGCAACGTGATGATCTGCGAGACTAAAGTGAAACGAGTTCCCGGAGCATCG
GAGTATCCCATGAAAGAGTTGAGCACTCCTCCCAGTTCTTCAGGGAACGGAGGGAACGTGGGGC
CTGCAACCAGCCCTGCCAGGAGCAGCGACATGCTGTACCTCATCGTCGGCTGTGTGCTTGGGGT
TATGGTCCTCATTCTTCTGGTCTTCATTGCACTGTGTCTGTGGAAGAGTCGCCAACAGAGTGCC
ATACAGAAATATGATCCTCCAGGATATCTCTACCAGGGGTCAGAGATTAATGGGCAGATGGTAG
AGTATACCACTCTCTCAGGAACAGCCCGGATCAATGGGAGTGTTCACGGAGGCTTCCTCAGCAA
AGGCAGTCTCAGCAATGGCTGCTCTCACCTCCACCACAAAGGCCCCAACGGAGTCAATGGGATC
CTGAATGGAACCATAAATGGGGGGCTTTATTCTGCACACACCAGCTCCCTAACCAGGACGTGTG
TGGAGTTCGAACATCCTCACCATCTAGTGAACGGTGGAGCAGTGTACACGGCTGTCCCTCAGAT
GGACCCACTGGAATGCATTAATTGTCGGAATTGCCGGAACAACAATAGGTGTTTCACCAAAACC
AACAGTCCCCTTCCTGTGGTCCCAGTGGTAGCCTCTTATCCTCAGGATGGACTGGAAATGAAGC
CCCTCGGTGTCATGAAGTTCCCAGTGTGTCCAGTTTCCACAGTTCCTGATGGTGGCCAGATACC
TGAGGAGTGCCTCAAGGACAGCGTGGCACCAGCACCTACCCAGCGTACATGCCGCCAGGACAAC
ACAAGCGACATCAATTCTGATTCCACAGAAGACACAGCAGAGTTCAACAGAGGAGACAGCAGCG
GTCATTCAGAAGCAGAGGACAAAGTTTTCAGTTGGAGTCCTCTTATTTTATCACCTGTCTTGGA
GGACTGCAGTGAGAAGACAGCGTGGTCTCCTCCTGGCCCCCCTCTAGACGGGCTGTCAGTGGTC
CTTCAGCAAGCCCAAGAGACCTGAGAGGAATGTGAGCAGGCCTCCCACTGCAAGCCAGTAACTG
CACCACACAGGCCTGGGGACAAACTGTGTGAAGGACATTAATTCAAATCAGAGAAAACCATTAT
TTATTTTTTGGTAGTAGTAATGTCATGAATGTATCTTAAAATGTGCGCCCTTTTATATTATTTA
TGCCTTATGTTTTCCCTTCCCCATTTCTTCCTCCCCCTATTTTTTTTTAATGCAGAGTTTTTTT
AATCGTCTGGAGAGCAGGGGATCATTCTGTGTCTTCTGGGGCCTTCAGTTGGCAGGCTTCCATC
TTCTGGCCTGTTCAGTTGTGGGGAGAGGATTGCCCACGCCATTTCACATTTGTCACCAGTCGTT
CCTAGATGGAAAAACTGTTACCTCTCCCATGTCGTCAGACTTTTGGGAACATTTAAAAATCAAC
CATAGTTGTGATCATATGTTTATAATAGCCAACCCAGCTGACACACTTTTGAGTACCTTCCAGA
AAAATACTAATACTGACTTATTTTCTCTCTGTGCCTGGGTACAAGTAGCGATCAATCTTCTAGG
TATCAAATTAGCCAGTGTTGTTATGAACACAGAAACATGTAAAGTCTGTTTGGATTATTGTATT
ATATAGAAAGGGAACCAGATTCAGAAGGAAAAGTAATGCCTTCATGGTTCCACTGCTCCTATTA
TCTTAATTTACAAAATGGCCACCACGAGTTCTTTGCACTACTTGCAGAGGTATATAATAAATAC
AAAAGTAAGGCCTTTAAACTGATAGTTTG

hide sequence

RefSeq Acc Id:

XM_006242791 ⟹ XP_006242853

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	42,032,921 - 42,119,451 (+)	NCBI
mRatBN7.2	8	33,775,124 - 33,861,635 (+)	NCBI
Rnor_6.0	8	36,625,757 - 36,712,091 (+)	NCBI
Rnor_5.0	8	36,642,905 - 36,728,577 (+)	NCBI

Sequence:

show sequence

GCGGGGGGATGACCTGGGGGTGGCTCTCGGAGCCGGCTGCTGTGCAGGAGGTCTCGGGGCTTAG
CCAGCCCTGCGGAGAGTAAGCTGAGGCCTGAGCTTTCTCGGAAAGTCTTCCCAGCCTACTTCTG
TAATTGGGCGATATGCATCCAGACCTCGGACCCTTATGGAAACTGCTGTATGTTCTTGTGATTC
TGTGTTCTTCTGTGAGCTCAGACTTGGCACCTTATTTTATTTCTGAGCCACTCTCTGCTGTCCA
GAAGCTTGGCAGACCCGTGGTCCTACATTGTTCTGCTAAACCTGTTACTGCCCGAATCTCATGG
TTGCATAATGGAAAACGATTGGACAGAAACACAGAACAGATAAAGATCCACCGGGGGACTTTGA
CCATTCTGTCTCTCAACCCTTCCCTTTCTGGTTGCTACCAGTGTGTGGCCAACAACAGTGTTGG
GGCTGTTGTCAGTGGCCCTGCCACAGTGTCCGCTGCAGCCCTGGCTGATTTCGATTCATCAACA
ATGCATGTTATTACTGCAGAAGAGAAAAACACGGGTTTCATTGGCTGCAGGGTACCTGAGAGTA
ACCCCAAAGCTGAGGTGCGCTACAAGATCCGGGGAAAGTGGCTGATGTATTCCACAGGGAACTA
CATAATCCTTCCCTCAGGAAATCTTCAGATTTTGAATGTATCCTCGAAGGATAAGGGATCCTAC
AAGTGTGCTGCCTATAATCCTGTCACCAGTGAACTGAAAGTTGAACCCGCTGGCCGGAAGCTCC
TTGTGAGTCGTCCTTCCTCGGATGGTTTTCACATTCTTCACCCTGCTCTTTCTCAGGCATTAGC
TGTCCTTCCGCACAGCCCTGTTACCTTGGAGTGTGTAGTGAGTGGGGTCCCCGCCTCACAAGTG
TATTGGCTGAAGGACGGGCAGGATGCTCTGTCAGGAAGCAACTGGAGAAGGCTGTACTCTCACC
TGGCCACAGCTAGCATCGACCCAGCGGATTCCGGGAACTATTCCTGTGTGGTGGGCAACAACAG
GTCCGGAGATGTTAAACACGTCACTTACACAGTCAACGTACTGGAGCACGCTTCAATTTCTAAA
GGGCTGCACGATCAGAAGGTGTCCCTGGGGGCCACCGTACGTTTTACCTGCGAAGTTCACGGGA
ACCCAGCCCCCAACCGCACCTGGTTTCATAACGCACAGCCCATCCGCCCCTCCTCACGGCATCT
GACGGAAGGAAGTGTTCTGAAGATCACCGGGGTCATCATGGAGGATTCTGGGTTGTATCAGTGC
ATGGCAGACAATGGGATTGGATTTATGCAATCTACTGGAAGACTTCAAATTGAACAAGACAGTG
GACAGAGGCCTGTCATAGTCACCGCCCCAGCAAACGTAGAGGTGACGGACGGAGACTTCGTGAC
TTTGTCTTGCAATGCCACAGGAGAGCCTGTCCCGGTCATTCATTGGTACGGCCGCCATGGATTG
ATAACCAGCCATCCATCTCAGGTCCTTAGGTCCAAATCTCGAAAGTCCCACCTCTTCCGACCTG
GGGACCTGGACCCGGAGCCTGTCTACCTCATCATGTCCCAAGCGGGCTCGAGCTCTCTGTCCAT
CCAGGCAGTGACTTGGGAGCATGCTGGGAAATACACTTGCGAAGCTGTGAACAAACATGGCAGC
ACACAGTCAGAAGCGTTCCTCACAGTCGTTCCTTTTGAAACAAACACAAAGGCAGAGCCAGTCA
CACCCTCCGAAGCTTCTCAGAACGATGAACGAGACCCACGAGACGGTTCAGAGTCCGGCTTGCT
GAACTTGTTTCCAGTGAAGGTGCATTCCGGTGGAGTGGAATTGCCAGCAGAGAAAAATGCCTCT
GTCCCCGATGCTCCTAACATACTGAGCCCCCCACAGACCCACATGCCAGACACATACACCCTGG
TGTGGAGGGCGGGGAGGGATGGCGGAATGCCCATCAACGCCTATTTCGTGAAGTACCGAAAGCT
GGACGACGGCAGTGGTGCGGTAGGCAGCTGGCACACGGTTCGCGTCCCAGGGAGTGAGAGCGAG
CTGCATCTAACCGAACTGGAGCCTTCAAGCCTTTATGAAGTTTTGATGGTGGCCAGAAGTGCAG
TCGGCGAAGGACAGCCTGCCATGCTTACCTTCCGGACCAGCAAAGAAAAGATGGCATCATCAAA
AAACACCCAGGCGTCCTTTCCACCTGTGGGCATCCCTAAGCGGCCTGTAACTTCGGAGGCTTCC
AACAGCAATTTTGGAGTTGTGCTTACGGATTCCTCTAGGCATAGTGGAGTCCCAGAGGCACCAG
ATCGACCTACTATCTCGATGGCATCGGAGACCTCAGTCTATGTCACCTGGATTCCCCGTGCAAA
TGGCGGCTCTCCCATCACTGCCTTCAAGGTGGAATATAAGCGGATGAAAAGTAGTGACTGGCTG
GTGGCTGCTGAAGACATCCCTCCTTCCAAACTCTCTGTGGAAGTCCGGAGTTTAGAGCCAGGTT
CGATATACAAATTTAGGGTCATTGCTATCAACCATTACGGTGAGAGTTTTCGGAGCTCGGCGTC
CCGTCCCTACCAGGTGGCTGGCTTCCCAAATCGCTTTTCCAATCGCCCCATAACTGGACCTCAC
ATCGCATACACAGAGGCTGTCAGCGATACTCAGATCATGCTAAAATGGACGTATATTCCATCAA
GTAACAATAACACTCCCATTCAAGGATTCTATATCTATTACCGGCCAACAGACAGTGACAATGA
CAGTGATTACAAGAGGGATGTTGTGGAAGGTTCAAAGCAGTGGCACACCATTGGTCACCTGCAG
CCAGAGACCTCCTATGACATTAAGATGCAGTGCTTTAATGAAGGAGGAGAGAGTGAGTTCAGCA
ACGTGATGATCTGCGAGACTAAAGTGAAACGAGTTCCCGGAGCATCGGAGTATCCCATGAAAGA
GTTGAGCACTCCTCCCAGTTCTTCAGGGAACGGAGGGAACGTGGGGCCTGCAACCAGCCCTGCC
AGGAGCAGCGACATGCTGTACCTCATCGTCGGCTGTGTGCTTGGGGTTATGGTCCTCATTCTTC
TGGTCTTCATTGCACTGTGTCTGTGGAAGAGTCGCCAACAGAGCGCCATACAGAAATATGATCC
TCCAGGATATCTCTACCAGGGGTCAGAGATTAATGGGCAGATGGTAGAGTATACCACTCTCTCA
GGAACAGCCCGGATCAATGGGAGTGTTCACGGAGGCTTCCTCAGCAAAGGCAGTCTCAGCAATG
GCTGCTCTCACCTCCACCACAAAGGCCCCAACGGAGTCAATGGGATCCTGAATGGAACCATAAA
TGGGGGGCTTTATTCTGCACACACCAGCTCCCTAACCAGGACGTGTGTGGAGTTCGAACATCCT
CACCATCTAGTGAACGGTGGAGCAGTGTACACGGCTGTCCCTCAGATGGACCCACTGGAATGCA
TTAATTGTCGGAATTGCCGGAACAACAATAGGTGTTTCACCAAAACCAACAGTCCCCTTCCTGT
GGTCCCAGTGGTAGCCTCTTATCCTCAGGATGGACTGGAAATGAAGCCCCTCGGTGTCATGAAG
TTCCCAGTGTGTCCAGTTTCCACAGTTCCTGATGGTGGCCAGATACCTGAGGAGTGCCTCAAGG
ACAGCGTGGCACCAGCACCTACCCAGCGTACATGCCGCCAGGACAACACAAGCGACATCAATTC
TGATTCCACAGAAGACACAGCAGAGTTCAACAGAGGAGACAGCAGCGGTCATTCAGAAGCAGAG
GACAAAGTTTTCAGTTGGAGTCCTCTTATTTTATCACCTGTCTTGGAGGACTGCAGTGAGAAGA
CAGCGTGGTCTCCTCCTGGCCCCCCTCTAGACGGGCTGTCAGTGGTCCTTCAGCAAGCCCAAGA
GACCTGAGAGGAATGTGAGCAGGCCTCCCACTGCAAGCCAGTAACTGCACCACACAGGCCTGGG
GACAAACTGTGTGAAGGACATTAATTCAAATCAGAGAAAACCATTATTTATTTTTTGGTAGTAG
TAATGTCATGAATGTATCTTAAAATGTGCGCCCTTTTATATTATTTATGCCTTATGTTTTCCCT
TCCCCATTTCTTCCTCCCCCTATTTTTTTTTAATGCAGAGTTTTTTTAATCGTCTGGAGAGCAG
GGGATCATTCTGTGTCTTCTGGGGCCTTCAGTTGGCAGGCTTCCATCTTCTGGCCTGTTCAGTT
GTGGGGAGAGGATTGCCCACGCCATTTCACATTTGTCACCAGTCGTTCCTAGATGGAAAAACTG
TTACCTCTCCCATGTCGTCAGACTTTTGGGAACATTTAAAAATCAACCATAGTTGTGATCATAT
GTTTATAATAGCCAACCCAGCTGACACACTTTTGAGTACCTTCCAGAAAAATACTAATACTGAC
TTATTTTCTCTCTGTGCCTGGGTACAAGTAGCGATCAATCTTCTAGGTATCAAATTAGCCAGTG
TTGTTATGAACACAGAAACATGTAAAGTCTGTTTGGATTATTGTATTATATAGAAAGGGAACCA
GATTCAGAAGGAAAAGTAATGCCTTCATGGTCCACTGCTCCTATTATCTTAATTTACAAAATGG
CCACCACGAGTTCTTCGCACTACTTGCAGAGGTATATAATAAATACAAAAGTAAGGCCTTTAAA
CTGATAGTTTGAAGAGAAGGATATTACATGCCTCAAGAAAGAGGAGGGCTGAAGGGACCTCTAA
GTGAAGCTCTTCCCTCTGTCCCATACTGCTTGTGGTGTTTACACTACCTGAAGGCTGACATTTT
TGTCACTTCCAGTGTTGACAGTATCCTGGGGGATCTGAGTGAGCATGTGTGACTCAGCCTTCTG
CCACTAGAGCAGAATTCCTGAGGTGATTGTCTTATAACACAGGGTTATCTTGACTCCCAGTTTT
AGAAGTTCTAGTTTGTGGCTGAATAGACCTGTAGCTTTGGACCTGTGTTGAGGAAGCATATCAT
GGTGGGCATGCATAGCAAAGCGAAATAGCTTAAACCGTAAATCGGGGGGGGGGGGGAGCGGAGT
GTTCAAGGCTCCACTGAGAGCACGCCTCAATGGTCTGACAACCTCACACTCCTCCCTCTTCAAG
AATCTGCCACCTCCGAAACATGCTGCCGTGGGAATCAGACTTCGGACACACAGATAGGCTTTGG
AAGATAGTATCCAAACTGCAGCAGAATGTCAGGGAAGGCTTAGCTGTGAGAGAGGGTTTAAGGG
CATTTTTCTGACAGTCTTTCTGGCCGCCATCACTATGAGCAGTAACCCTGGCTTCAGTCAGCGG
GGTTCACGCAGTCAGTTACTGTTCTCTGAGCAACAAGAACATTGCAGCTGTCTTTGGAAGGCTT
ACATGCATTTCAACAGCTTGAACCAAGCCCTAGTGGATCACAGATCTGCTTTTGAATGGTGTAT
CCCTTAGTGGGGCAGGGGGAAGGGAACCAACATTATTTCTCTTTATGCGGAATCAAACAATTCC
AGGATACGTTTTGTTTTCGTTTCCCGCAAAGCGAAAGAGAATACGGTACTGTACTGATCAACTC
TATATACATGCGTCAGTATTCCCTTACATATGCCTGTGTCTTTTATAAATAGAACTGCTAGTGG
GAGTGTGAGCTGTTTCAGCAGAGCCACTGCGCTAGAGTTCCTTCTGTAAAATTGCAGTAAATAG
AATTCCATAGATGGGTAGCGGGGTGCTATAGAAGCAAGTTCTATGATCCTGGGGTTCATGGCCA
TAGTGTAAAACATCCGCAATTAGTTTTGGAGGTGCTTAGCTGTAGCCTTACATCTTGACTTGCC
AAGGATGGCGTAGAGACCTACTGTGCGCTTTGCCAGTTGAGTCGGAACTAAGCCGTCTCGGAGC
AGGGCGTTTAGGAAAGCAGGAAGCAAATGTCCGTGGGCAATCAGTTGTTCACTGAGACTCATGA
AACAGGTAGGTCGGCACGAGCCTTGGGTCAGAACTGCTTTTAAAGATTGAGTTTGACGTGGGGC
TTGCCCATGAGGATGATAAAATTCCCTTACCTTTAGGGCAATCTCATTGTGGACTGCTTTATTT
ATGATTAGTAACGCTGTTTTAAGTGTTAACCCTTTTATTGTATTTTATTTATAAAAAATGGCTT
TATATATTGAGATATATAAAATATAAATATAAATCTATATAATTGCCTTTATATTTAGGAGTTT
GAGTTCTCCTTAGTGTGAGTTTCTGTGAACTTTCATGTTCTGCACAGTCACCAGAAATGGTTGT
AGCAAGTGTCACTTCCCCGGGAATCAAGAGGACATAGGAAAAATGTGTGTGGGTGGGTGTGGGG
GGGTCACCAGTCATTCCTACGTGGAATGGCATGCACTTGTGGAGGGACAATTGTTTATTGAGTT
CCCTGTTTATTACTGTTATCTCATCTGACCCCCACAGCAAATAGACAGAGTAGGCATGAAGTTC
TCAGCCCATGAGTGAGCTAGAGCCCGCACTGGAGCCCAGTTCACCTGTCCCGTCACCCATGCCC
CATTTACCTGCTTTCTGGAAGTGTTATGGTTCACCCTCCATGGAACCAGTCCAGAACGTGTGCA
TTGTCCACCCCTGCTGCGAACTTTCTCTGTGAGGCTCCAACTGCAGCTGGTGGGGCTTCCCTCT
GTCCACCCTCATCCCAAACTGACAGGGCTCTTACCAAGTACATCATCTTCAGGAATCTCTCTTT
GATACCCTCCCCTTACCCTCACCCAACTCCTACCCTCTCCTAACCCTGTGAACATTTAACCTTC
AACTGGCTCACTGGCCATGAACCTGGTAGGGGCCTCTTCATGTATTGGGTGAGTCTTCCTTTAG
CGTTAAACTTCCCTAGGCCTAGTAAATTGTGTCACCTTTCCCTGGTTGTGTTCACCAATTACGT
AGCCGACTCTGGTGACAGGTGCTATACAGGGTATAGGTTAATTGCGTCACTCTAAACCGTTGAG
GTGATCTCACTGTTGAACGGTTTTTACTGGGTTCTCTTTGTACAGTTGTTATTCCAGGCTGATG
ACGTCACTTCTCTGTGTCAGCCCCAGCACTACCAGGAAACTGTGTGGAACTGTCCTTTACCTGT
ATTGCTCGCTCTGACCGTGTTGACCCTGAGATGCATGTTTTGTACTATATTGAAAAAAAATGTT
TATTTTCCTTAAAGTTGTGCTATTATGTGTGAAATTGTACATACTCTAAGTGATGTAGTTTTGA
CCGGTTTTATTTGGTTGACATGATTTTATATTAAAAGAGAATGCTGCTTTCA

hide sequence

RefSeq Acc Id:

XM_006242792 ⟹ XP_006242854

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	42,033,216 - 42,119,451 (+)	NCBI
mRatBN7.2	8	33,782,440 - 33,859,033 (+)	NCBI
Rnor_6.0	8	36,632,877 - 36,712,091 (+)	NCBI
Rnor_5.0	8	36,642,905 - 36,728,577 (+)	NCBI

Sequence:

show sequence

AAAAAAAATAAACAAATGAACAAAAATGGAGATAAAATGGGGTTTTCTAATGCTTGGAGTTATC
AGTATCAAAACTGATGGTACTTGGCAGATACAGAATATCTGTATTTCGGTCAGTCTACTTGTTA
CGTATTTGCTCCTACAAATTAGACGTAAAGAGTATCAAATACTCCTCTTGTTTTTCTAGCATCC
AAAGTTCTCTAAACTTTAATTTCAAGGGAAAGAAAGGGGAAGAGGCCAGAGGTCAGGCCCAGTG
ATGTAACAGCAACAAAACTATGTGGGCTTGGCTGGGGTCACACACAGTTACTCTTCACTGGGTG
TAACTCCTTCTACAAAATGGCATTTTATGTTATTAATTGGTCTTTAGAAGAGTTGGCAGTTCTG
TGTGATCTTGAATCATCGAAGTAATATTTTTTCTTTTATAAAACAGGAAAGTGTATTCAGTTTT
TACTCTTAAATTTAATTGATGATGATGGTGGTGGTGGTGGTGGTGGTGATGATGATGAAGAAAA
TGGTGATTGCATGTGAGTATCTGTGAATTCTGGGATGGAACCTTAGTCTCCAGGTTTGCTCTGC
CATCATTTTGATCTGCTAAGCCAACTCCAGCCCAAAGACAGTTCTATATTTATTGTGTGCACAT
AGCTACCCTCCCTCCCTCCTCTCCACTCATGCTCTTTTCTCTGTGGGTATGCCTTATCTCTCCA
GCTCCATTCCCAAAATCAGGAGGGGGAATAAAAATATAAGGGGACCCCCCCAATAAAACCCCCA
AAGAAATAAACTTCACGACCCTTTCCTAAACAGTTACTAGCCTATCACCATGTTCCTGTCTTCA
AACAGTCTATCGTTTGCTTATGATGTTCCTCAACCCTACGTTTGACCACGTTCCAGCTCCCAGT
TTTGTGTCTGTGACTATGCCAGGCTTCAGGATCTCTTTCCCCTCCCTTTTCTGAGCCAGGGTCT
CTCATGTCCTAGGCTGGCTTCAAACTCACAGACTTCTGATTTCCCTACCTCCACCTCCCAAGTG
ATAGAATTGCAGGTATGTGCTATTATGCTGGGCTTATGGGGTTTGTATGACTACTAGGCAAGCA
CCCTGCCAGCTGAGCTAACTTCCTTAGCTTGGCGACTATCTTAACACCCTGTAATTGTGTACAG
TGCTGTCAAACTTGCCCTGTAAGGACAATAGAGTTTTCCCCCACCATTACCTGTTCTCACCCTA
CTGACTGTGCCCTGAAAACCCCGATGCACATTTGAATTCTTGGGCAAATTCTAGTTCGAAGGTT
TGCTTGGACCCTGAGGAAGCTAACCTTATCTGTGGGTTAATTCATTAATAGAATGGGTTCTTAC
AGAGAGGGCTAGGAGGAGGCAGGGCCTTGCTGGAGGAAAGTAGGTCACTGGGACATGCCCTTGA
AGAATGTAGTTCTTGGGCTCTACTTTTACCTCTCCTCTGCTTCCTAGCTGCTTTGAGATCACAG
ACTCCTGTGCCATAGGCATCGACTGCTGAGTTCTGCTTCACATCAGGCCTGTGGAAGTGAAGCT
GGTCACCATGGACCAAAACCTCTGAACCATGCACCAGAATAAGCTGAGGCCTGAGCTTTCTCGG
AAAGTCTTCCCAGCCTACTTCTGTAATTGGGCGATATGCATCCAGACCTCGGACCCTTATGGAA
ACTGCTGTATGTTCTTGTGATTCTGTGTTCTTCTGTGAGCTCAGACTTGGCACCTTATTTTATT
TCTGAGCCACTCTCTGCTGTCCAGAAGCTTGGCAGACCCGTGGTCCTACATTGTTCTGCTAAAC
CTGTTACTGCCCGAATCTCATGGTTGCATAATGGAAAACGATTGGACAGAAACACAGAACAGAT
AAAGATCCACCGGGGGACTTTGACCATTCTGTCTCTCAACCCTTCCCTTTCTGGTTGCTACCAG
TGTGTGGCCAACAACAGTGTTGGGGCTGTTGTCAGTGGCCCTGCCACAGTGTCCGCTGCAGCCC
TGGCTGATTTCGATTCATCAACAATGCATGTTATTACTGCAGAAGAGAAAAACACGGGTTTCAT
TGGCTGCAGGGTACCTGAGAGTAACCCCAAAGCTGAGGTGCGCTACAAGATCCGGGGAAAGTGG
CTGATGTATTCCACAGGGAACTACATAATCCTTCCCTCAGGAAATCTTCAGATTTTGAATGTAT
CCTCGAAGGATAAGGGATCCTACAAGTGTGCTGCCTATAATCCTGTCACCAGTGAACTGAAAGT
TGAACCCGCTGGCCGGAAGCTCCTTGTGAGTCGTCCTTCCTCGGATGGTTTTCACATTCTTCAC
CCTGCTCTTTCTCAGGCATTAGCTGTCCTTCCGCACAGCCCTGTTACCTTGGAGTGTGTAGTGA
GTGGGGTCCCCGCCTCACAAGTGTATTGGCTGAAGGACGGGCAGGATGCTCTGTCAGGAAGCAA
CTGGAGAAGGCTGTACTCTCACCTGGCCACAGCTAGCATCGACCCAGCGGATTCCGGGAACTAT
TCCTGTGTGGTGGGCAACAACAGGTCCGGAGATGTTAAACACGTCACTTACACAGTCAACGTAC
TGGAGCACGCTTCAATTTCTAAAGGGCTGCACGATCAGAAGGTGTCCCTGGGGGCCACCGTACG
TTTTACCTGCGAAGTTCACGGGAACCCAGCCCCCAACCGCACCTGGTTTCATAACGCACAGCCC
ATCCGCCCCTCCTCACGGCATCTGACGGAAGGAAGTGTTCTGAAGATCACCGGGGTCATCATGG
AGGATTCTGGGTTGTATCAGTGCATGGCAGACAATGGGATTGGATTTATGCAATCTACTGGAAG
ACTTCAAATTGAACAAGACAGTGGACAGAGGCCTGTCATAGTCACCGCCCCAGCAAACGTAGAG
GTGACGGACGGAGACTTCGTGACTTTGTCTTGCAATGCCACAGGAGAGCCTGTCCCGGTCATTC
ATTGGTACGGCCGCCATGGATTGATAACCAGCCATCCATCTCAGGTCCTTAGGTCCAAATCTCG
AAAGTCCCACCTCTTCCGACCTGGGGACCTGGACCCGGAGCCTGTCTACCTCATCATGTCCCAA
GCGGGCTCGAGCTCTCTGTCCATCCAGGCAGTGACTTGGGAGCATGCTGGGAAATACACTTGCG
AAGCTGTGAACAAACATGGCAGCACACAGTCAGAAGCGTTCCTCACAGTCGTTCCTTTTGAAAC
AAACACAAAGGCAGAGCCAGTCACACCCTCCGAAGCTTCTCAGAACGATGAACGAGACCCACGA
GACGGTTCAGAGTCCGGCTTGCTGAACTTGTTTCCAGTGAAGGTGCATTCCGGTGGAGTGGAAT
TGCCAGCAGAGAAAAATGCCTCTGTCCCCGATGCTCCTAACATACTGAGCCCCCCACAGACCCA
CATGCCAGACACATACACCCTGGTGTGGAGGGCGGGGAGGGATGGCGGAATGCCCATCAACGCC
TATTTCGTGAAGTACCGAAAGCTGGACGACGGCAGTGGTGCGGTAGGCAGCTGGCACACGGTTC
GCGTCCCAGGGAGTGAGAGCGAGCTGCATCTAACCGAACTGGAGCCTTCAAGCCTTTATGAAGT
TTTGATGGTGGCCAGAAGTGCAGTCGGCGAAGGACAGCCTGCCATGCTTACCTTCCGGACCAGC
AAAGAAAAGATGGCATCATCAAAAAACACCCAGGCGTCCTTTCCACCTGTGGGCATCCCTAAGC
GGCCTGTAACTTCGGAGGCTTCCAACAGCAATTTTGGAGTTGTGCTTACGGATTCCTCTAGGCA
TAGTGGAGTCCCAGAGGCACCAGATCGACCTACTATCTCGATGGCATCGGAGACCTCAGTCTAT
GTCACCTGGATTCCCCGTGCAAATGGCGGCTCTCCCATCACTGCCTTCAAGGTGGAATATAAGC
GGATGAAAAGTAGTGACTGGCTGGTGGCTGCTGAAGACATCCCTCCTTCCAAACTCTCTGTGGA
AGTCCGGAGTTTAGAGCCAGGTTCGATATACAAATTTAGGGTCATTGCTATCAACCATTACGGT
GAGAGTTTTCGGAGCTCGGCGTCCCGTCCCTACCAGGTGGCTGGCTTCCCAAATCGCTTTTCCA
ATCGCCCCATAACTGGACCTCACATCGCATACACAGAGGCTGTCAGCGATACTCAGATCATGCT
AAAATGGACGTATATTCCATCAAGTAACAATAACACTCCCATTCAAGGATTCTATATCTATTAC
CGGCCAACAGACAGTGACAATGACAGTGATTACAAGAGGGATGTTGTGGAAGGTTCAAAGCAGT
GGCACACCATTGGTCACCTGCAGCCAGAGACCTCCTATGACATTAAGATGCAGTGCTTTAATGA
AGGAGGAGAGAGTGAGTTCAGCAACGTGATGATCTGCGAGACTAAAGTGAAACGAGTTCCCGGA
GCATCGGAGTATCCCATGAAAGAGTTGAGCACTCCTCCCAGTTCTTCAGGGAACGGAGGGAACG
TGGGGCCTGCAACCAGCCCTGCCAGGAGCAGCGACATGCTGTACCTCATCGTCGGCTGTGTGCT
TGGGGTTATGGTCCTCATTCTTCTGGTCTTCATTGCACTGTGTCTGTGGAAGAGTCGCCAACAG
AGCGCCATACAGAAATATGATCCTCCAGGATATCTCTACCAGGGGTCAGAGATTAATGGGCAGA
TGGTAGAGTATACCACTCTCTCAGGAACAGCCCGGATCAATGGGAGTGTTCACGGAGGCTTCCT
CAGCAAAGGCAGTCTCAGCAATGGCTGCTCTCACCTCCACCACAAAGGCCCCAACGGAGTCAAT
GGGATCCTGAATGGAACCATAAATGGGGGGCTTTATTCTGCACACACCAGCTCCCTAACCAGGA
CGTGTGTGGAGTTCGAACATCCTCACCATCTAGTGAACGGTGGAGCAGTGTACACGGCTGTCCC
TCAGATGGACCCACTGGAATGCATTAATTGTCGGAATTGCCGGAACAACAATAGGTGTTTCACC
AAAACCAACAGTCCCCTTCCTGTGGTCCCAGTGGTAGCCTCTTATCCTCAGGATGGACTGGAAA
TGAAGCCCCTCGGTGTCATGAAGTTCCCAGTGTGTCCAGTTTCCACAGTTCCTGATGGTGGCCA
GATACCTGAGGAGTGCCTCAAGGACAGCGTGGCACCAGCACCTACCCAGCGTACATGCCGCCAG
GACAACACAAGCGACATCAATTCTGATTCCACAGAAGACACAGCAGAGTTCAACAGAGGAGACA
GCAGCGGTCATTCAGAAGCAGAGGACAAAGTTTTCAGTTGGAGTCCTCTTATTTTATCACCTGT
CTTGGAGGACTGCAGTGAGAAGACAGCGTGGTCTCCTCCTGGCCCCCCTCTAGACGGGCTGTCA
GTGGTCCTTCAGCAAGCCCAAGAGACCTGAGAGGAATGTGAGCAGGCCTCCCACTGCAAGCCAG
TAACTGCACCACACAGGCCTGGGGACAAACTGTGTGAAGGACATTAATTCAAATCAGAGAAAAC
CATTATTTATTTTTTGGTAGTAGTAATGTCATGAATGTATCTTAAAATGTGCGCCCTTTTATAT
TATTTATGCCTTATGTTTTCCCTTCCCCATTTCTTCCTCCCCCTATTTTTTTTTAATGCAGAGT
TTTTTTAATCGTCTGGAGAGCAGGGGATCATTCTGTGTCTTCTGGGGCCTTCAGTTGGCAGGCT
TCCATCTTCTGGCCTGTTCAGTTGTGGGGAGAGGATTGCCCACGCCATTTCACATTTGTCACCA
GTCGTTCCTAGATGGAAAAACTGTTACCTCTCCCATGTCGTCAGACTTTTGGGAACATTTAAAA
ATCAACCATAGTTGTGATCATATGTTTATAATAGCCAACCCAGCTGACACACTTTTGAGTACCT
TCCAGAAAAATACTAATACTGACTTATTTTCTCTCTGTGCCTGGGTACAAGTAGCGATCAATCT
TCTAGGTATCAAATTAGCCAGTGTTGTTATGAACACAGAAACATGTAAAGTCTGTTTGGATTAT
TGTATTATATAGAAAGGGAACCAGATTCAGAAGGAAAAGTAATGCCTTCATGGTCCACTGCTCC
TATTATCTTAATTTACAAAATGGCCACCACGAGTTCTTCGCACTACTTGCAGAGGTATATAATA
AATACAAAAGTAAGGCCTTTAAACTGATAGTTTGAAGAGAAGGATATTACATGCCTCAAGAAAG
AGGAGGGCTGAAGGGACCTCTAAGTGAAGCTCTTCCCTCTGTCCCATACTGCTTGTGGTGTTTA
CACTACCTGAAGGCTGACATTTTTGTCACTTCCAGTGTTGACAGTATCCTGGGGGATCTGAGTG
AGCATGTGTGACTCAGCCTTCTGCCACTAGAGCAGAATTCCTGAGGTGATTGTCTTATAACACA
GGGTTATCTTGACTCCCAGTTTTAGAAGTTCTAGTTTGTGGCTGAATAGACCTGTAGCTTTGGA
CCTGTGTTGAGGAAGCATATCATGGTGGGCATGCATAGCAAAGCGAAATAGCTTAAACCGTAAA
TCGGGGGGGGGGGGGAGCGGAGTGTTCAAGGCTCCACTGAGAGCACGCCTCAATGGTCTGACAA
CCTCACACTCCTCCCTCTTCAAGAATCTGCCACCTCCGAAACATGCTGCCGTGGGAATCAGACT
TCGGACACACAGATAGGCTTTGGAAGATAGTATCCAAACTGCAGCAGAATGTCAGGGAAGGCTT
AGCTGTGAGAGAGGGTTTAAGGGCATTTTTCTGACAGTCTTTCTGGCCGCCATCACTATGAGCA
GTAACCCTGGCTTCAGTCAGCGGGGTTCACGCAGTCAGTTACTGTTCTCTGAGCAACAAGAACA
TTGCAGCTGTCTTTGGAAGGCTTACATGCATTTCAACAGCTTGAACCAAGCCCTAGTGGATCAC
AGATCTGCTTTTGAATGGTGTATCCCTTAGTGGGGCAGGGGGAAGGGAACCAACATTATTTCTC
TTTATGCGGAATCAAACAATTCCAGGATACGTTTTGTTTTCGTTTCCCGCAAAGCGAAAGAGAA
TACGGTACTGTACTGATCAACTCTATATACATGCGTCAGTATTCCCTTACATATGCCTGTGTCT
TTTATAAATAGAACTGCTAGTGGGAGTGTGAGCTGTTTCAGCAGAGCCACTGCGCTAGAGTTCC
TTCTGTAAAATTGCAGTAAATAGAATTCCATAGATGGGTAGCGGGGTGCTATAGAAGCAAGTTC
TATGATCCTGGGGTTCATGGCCATAGTGTAAAACATCCGCAATTAGTTTTGGAGGTGCTTAGCT
GTAGCCTTACATCTTGACTTGCCAAGGATGGCGTAGAGACCTACTGTGCGCTTTGCCAGTTGAG
TCGGAACTAAGCCGTCTCGGAGCAGGGCGTTTAGGAAAGCAGGAAGCAAATGTCCGTGGGCAAT
CAGTTGTTCACTGAGACTCATGAAACAGGTAGGTCGGCACGAGCCTTGGGTCAGAACTGCTTTT
AAAGATTGAGTTTGACGTGGGGCTTGCCCATGAGGATGATAAAATTCCCTTACCTTTAGGGCAA
TCTCATTGTGGACTGCTTTATTTATGATTAGTAACGCTGTTTTAAGTGTTAACCCTTTTATTGT
ATTTTATTTATAAAAAATGGCTTTATATATTGAGATATATAAAATATAAATATAAATCTATATA
ATTGCCTTTATATTTAGGAGTTTGAGTTCTCCTTAGTGTGAGTTTCTGTGAACTTTCATGTTCT
GCACAGTCACCAGAAATGGTTGTAGCAAGTGTCACTTCCCCGGGAATCAAGAGGACATAGGAAA
AATGTGTGTGGGTGGGTGTGGGGGGGTCACCAGTCATTCCTACGTGGAATGGCATGCACTTGTG
GAGGGACAATTGTTTATTGAGTTCCCTGTTTATTACTGTTATCTCATCTGACCCCCACAGCAAA
TAGACAGAGTAGGCATGAAGTTCTCAGCCCATGAGTGAGCTAGAGCCCGCACTGGAGCCCAGTT
CACCTGTCCCGTCACCCATGCCCCATTTACCTGCTTTCTGGAAGTGTTATGGTTCACCCTCCAT
GGAACCAGTCCAGAACGTGTGCATTGTCCACCCCTGCTGCGAACTTTCTCTGTGAGGCTCCAAC
TGCAGCTGGTGGGGCTTCCCTCTGTCCACCCTCATCCCAAACTGACAGGGCTCTTACCAAGTAC
ATCATCTTCAGGAATCTCTCTTTGATACCCTCCCCTTACCCTCACCCAACTCCTACCCTCTCCT
AACCCTGTGAACATTTAACCTTCAACTGGCTCACTGGCCATGAACCTGGTAGGGGCCTCTTCAT
GTATTGGGTGAGTCTTCCTTTAGCGTTAAACTTCCCTAGGCCTAGTAAATTGTGTCACCTTTCC
CTGGTTGTGTTCACCAATTACGTAGCCGACTCTGGTGACAGGTGCTATACAGGGTATAGGTTAA
TTGCGTCACTCTAAACCGTTGAGGTGATCTCACTGTTGAACGGTTTTTACTGGGTTCTCTTTGT
ACAGTTGTTATTCCAGGCTGATGACGTCACTTCTCTGTGTCAGCCCCAGCACTACCAGGAAACT
GTGTGGAACTGTCCTTTACCTGTATTGCTCGCTCTGACCGTGTTGACCCTGAGATGCATGTTTT
GTACTATATTGAAAAAAAATGTTTATTTTCCTTAAAGTTGTGCTATTATGTGTGAAATTGTACA
TACTCTAAGTGATGTAGTTTTGACCGGTTTTATTTGGTTGACATGATTTTATATTAAAAGAGAA
TGCTGCTTTCA

hide sequence

RefSeq Acc Id:

XM_006242793 ⟹ XP_006242855

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	42,032,932 - 42,119,451 (+)	NCBI
mRatBN7.2	8	33,775,123 - 33,861,635 (+)	NCBI
Rnor_6.0	8	36,625,757 - 36,712,091 (+)	NCBI
Rnor_5.0	8	36,642,905 - 36,728,577 (+)	NCBI

Sequence:

show sequence

GCGGGGGGATGACCTGGGGGTGGCTCTCGGAGCCGGCTGCTGTGCAGGAGGTCTCGGGGCTTAG
CCAGCCCTGCGGAGAGTAAGCTGAGGCCTGAGCTTTCTCGGAAAGTCTTCCCAGCCTACTTCTG
TAATTGGGCGATATGCATCCAGACCTCGGACCCTTATGGAAACTGCTGTATGTTCTTGTGATTC
TGTGTTCTTCTGTGAGCTCAGACTTGGCACCTTATTTTATTTCTGAGCCACTCTCTGCTGTCCA
GAAGCTTGGCAGACCCGTGGTCCTACATTGTTCTGCTAAACCTGTTACTGCCCGAATCTCATGG
TTGCATAATGGAAAACGATTGGACAGAAACACAGAACAGATAAAGATCCACCGGGGGACTTTGA
CCATTCTGTCTCTCAACCCTTCCCTTTCTGGTTGCTACCAGTGTGTGGCCAACAACAGTGTTGG
GGCTGTTGTCAGTGGCCCTGCCACAGTGTCCGCTGCAGCCCTGGCTGATTTCGATTCATCAACA
ATGCATGTTATTACTGCAGAAGAGAAAAACACGGGTTTCATTGGCTGCAGGGTACCTGAGAGTA
ACCCCAAAGCTGAGGTGCGCTACAAGATCCGGGGAAAGTGGCTGATGTATTCCACAGGGAACTA
CATAATCCTTCCCTCAGGAAATCTTCAGATTTTGAATGTATCCTCGAAGGATAAGGGATCCTAC
AAGTGTGCTGCCTATAATCCTGTCACCAGTGAACTGAAAGTTGAACCCGCTGGCCGGAAGCTCC
TTGTGAGTCGTCCTTCCTCGGATGGTTTTCACATTCTTCACCCTGCTCTTTCTCAGGCATTAGC
TGTCCTTCCGCACAGCCCTGTTACCTTGGAGTGTGTAGTGAGTGGGGTCCCCGCCTCACAAGTG
TATTGGCTGAAGGACGGGCAGGATGCTCTGTCAGGAAGCAACTGGAGAAGGCTGTACTCTCACC
TGGCCACAGCTAGCATCGACCCAGCGGATTCCGGGAACTATTCCTGTGTGGTGGGCAACAACAG
GTCCGGAGATGTTAAACACGTCACTTACACAGTCAACGTACTGGAGCACGCTTCAATTTCTAAA
GGGCTGCACGATCAGAAGGTGTCCCTGGGGGCCACCGTACGTTTTACCTGCGAAGTTCACGGGA
ACCCAGCCCCCAACCGCACCTGGTTTCATAACGCACAGCCCATCCGCCCCTCCTCACGGCATCT
GACGGAAGGAAGTGTTCTGAAGATCACCGGGGTCATCATGGAGGATTCTGGGTTGTATCAGTGC
ATGGCAGACAATGGGATTGGATTTATGCAATCTACTGGAAGACTTCAAATTGAACAAGTTCCTT
TTGAAACAAACACAAAGGCAGAGCCAGTCACACCCTCCGAAGCTTCTCAGAACGATGAACGAGA
CCCACGAGACGGTTCAGAGTCCGGCTTGCTGAACTTGTTTCCAGTGAAGGTGCATTCCGGTGGA
GTGGAATTGCCAGCAGAGAAAAATGCCTCTGTCCCCGATGCTCCTAACATACTGAGCCCCCCAC
AGACCCACATGCCAGACACATACACCCTGGTGTGGAGGGCGGGGAGGGATGGCGGAATGCCCAT
CAACGCCTATTTCGTGAAGTACCGAAAGCTGGACGACGGCAGTGGTGCGGTAGGCAGCTGGCAC
ACGGTTCGCGTCCCAGGGAGTGAGAGCGAGCTGCATCTAACCGAACTGGAGCCTTCAAGCCTTT
ATGAAGTTTTGATGGTGGCCAGAAGTGCAGTCGGCGAAGGACAGCCTGCCATGCTTACCTTCCG
GACCAGCAAAGAAAAGATGGCATCATCAAAAAACACCCAGGCGTCCTTTCCACCTGTGGGCATC
CCTAAGCGGCCTGTAACTTCGGAGGCTTCCAACAGCAATTTTGGAGTTGTGCTTACGGATTCCT
CTAGGCATAGTGGAGTCCCAGAGGCACCAGATCGACCTACTATCTCGATGGCATCGGAGACCTC
AGTCTATGTCACCTGGATTCCCCGTGCAAATGGCGGCTCTCCCATCACTGCCTTCAAGGTGGAA
TATAAGCGGATGAAAAGTAGTGACTGGCTGGTGGCTGCTGAAGACATCCCTCCTTCCAAACTCT
CTGTGGAAGTCCGGAGTTTAGAGCCAGGTTCGATATACAAATTTAGGGTCATTGCTATCAACCA
TTACGGTGAGAGTTTTCGGAGCTCGGCGTCCCGTCCCTACCAGGTGGCTGGCTTCCCAAATCGC
TTTTCCAATCGCCCCATAACTGGACCTCACATCGCATACACAGAGGCTGTCAGCGATACTCAGA
TCATGCTAAAATGGACGTATATTCCATCAAGTAACAATAACACTCCCATTCAAGGATTCTATAT
CTATTACCGGCCAACAGACAGTGACAATGACAGTGATTACAAGAGGGATGTTGTGGAAGGTTCA
AAGCAGTGGCACACCATTGGTCACCTGCAGCCAGAGACCTCCTATGACATTAAGATGCAGTGCT
TTAATGAAGGAGGAGAGAGTGAGTTCAGCAACGTGATGATCTGCGAGACTAAAGTGAAACGAGT
TCCCGGAGCATCGGAGTATCCCATGAAAGAGTTGAGCACTCCTCCCAGTTCTTCAGGGAACGGA
GGGAACGTGGGGCCTGCAACCAGCCCTGCCAGGAGCAGCGACATGCTGTACCTCATCGTCGGCT
GTGTGCTTGGGGTTATGGTCCTCATTCTTCTGGTCTTCATTGCACTGTGTCTGTGGAAGAGTCG
CCAACAGAGCGCCATACAGAAATATGATCCTCCAGGATATCTCTACCAGGGGTCAGAGATTAAT
GGGCAGATGGTAGAGTATACCACTCTCTCAGGAACAGCCCGGATCAATGGGAGTGTTCACGGAG
GCTTCCTCAGCAAAGGCAGTCTCAGCAATGGCTGCTCTCACCTCCACCACAAAGGCCCCAACGG
AGTCAATGGGATCCTGAATGGAACCATAAATGGGGGGCTTTATTCTGCACACACCAGCTCCCTA
ACCAGGACGTGTGTGGAGTTCGAACATCCTCACCATCTAGTGAACGGTGGAGCAGTGTACACGG
CTGTCCCTCAGATGGACCCACTGGAATGCATTAATTGTCGGAATTGCCGGAACAACAATAGGTG
TTTCACCAAAACCAACAGTCCCCTTCCTGTGGTCCCAGTGGTAGCCTCTTATCCTCAGGATGGA
CTGGAAATGAAGCCCCTCGGTGTCATGAAGTTCCCAGTGTGTCCAGTTTCCACAGTTCCTGATG
GTGGCCAGATACCTGAGGAGTGCCTCAAGGACAGCGTGGCACCAGCACCTACCCAGCGTACATG
CCGCCAGGACAACACAAGCGACATCAATTCTGATTCCACAGAAGACACAGCAGAGTTCAACAGA
GGAGACAGCAGCGGTCATTCAGAAGCAGAGGACAAAGTTTTCAGTTGGAGTCCTCTTATTTTAT
CACCTGTCTTGGAGGACTGCAGTGAGAAGACAGCGTGGTCTCCTCCTGGCCCCCCTCTAGACGG
GCTGTCAGTGGTCCTTCAGCAAGCCCAAGAGACCTGAGAGGAATGTGAGCAGGCCTCCCACTGC
AAGCCAGTAACTGCACCACACAGGCCTGGGGACAAACTGTGTGAAGGACATTAATTCAAATCAG
AGAAAACCATTATTTATTTTTTGGTAGTAGTAATGTCATGAATGTATCTTAAAATGTGCGCCCT
TTTATATTATTTATGCCTTATGTTTTCCCTTCCCCATTTCTTCCTCCCCCTATTTTTTTTTAAT
GCAGAGTTTTTTTAATCGTCTGGAGAGCAGGGGATCATTCTGTGTCTTCTGGGGCCTTCAGTTG
GCAGGCTTCCATCTTCTGGCCTGTTCAGTTGTGGGGAGAGGATTGCCCACGCCATTTCACATTT
GTCACCAGTCGTTCCTAGATGGAAAAACTGTTACCTCTCCCATGTCGTCAGACTTTTGGGAACA
TTTAAAAATCAACCATAGTTGTGATCATATGTTTATAATAGCCAACCCAGCTGACACACTTTTG
AGTACCTTCCAGAAAAATACTAATACTGACTTATTTTCTCTCTGTGCCTGGGTACAAGTAGCGA
TCAATCTTCTAGGTATCAAATTAGCCAGTGTTGTTATGAACACAGAAACATGTAAAGTCTGTTT
GGATTATTGTATTATATAGAAAGGGAACCAGATTCAGAAGGAAAAGTAATGCCTTCATGGTCCA
CTGCTCCTATTATCTTAATTTACAAAATGGCCACCACGAGTTCTTCGCACTACTTGCAGAGGTA
TATAATAAATACAAAAGTAAGGCCTTTAAACTGATAGTTTGAAGAGAAGGATATTACATGCCTC
AAGAAAGAGGAGGGCTGAAGGGACCTCTAAGTGAAGCTCTTCCCTCTGTCCCATACTGCTTGTG
GTGTTTACACTACCTGAAGGCTGACATTTTTGTCACTTCCAGTGTTGACAGTATCCTGGGGGAT
CTGAGTGAGCATGTGTGACTCAGCCTTCTGCCACTAGAGCAGAATTCCTGAGGTGATTGTCTTA
TAACACAGGGTTATCTTGACTCCCAGTTTTAGAAGTTCTAGTTTGTGGCTGAATAGACCTGTAG
CTTTGGACCTGTGTTGAGGAAGCATATCATGGTGGGCATGCATAGCAAAGCGAAATAGCTTAAA
CCGTAAATCGGGGGGGGGGGGGAGCGGAGTGTTCAAGGCTCCACTGAGAGCACGCCTCAATGGT
CTGACAACCTCACACTCCTCCCTCTTCAAGAATCTGCCACCTCCGAAACATGCTGCCGTGGGAA
TCAGACTTCGGACACACAGATAGGCTTTGGAAGATAGTATCCAAACTGCAGCAGAATGTCAGGG
AAGGCTTAGCTGTGAGAGAGGGTTTAAGGGCATTTTTCTGACAGTCTTTCTGGCCGCCATCACT
ATGAGCAGTAACCCTGGCTTCAGTCAGCGGGGTTCACGCAGTCAGTTACTGTTCTCTGAGCAAC
AAGAACATTGCAGCTGTCTTTGGAAGGCTTACATGCATTTCAACAGCTTGAACCAAGCCCTAGT
GGATCACAGATCTGCTTTTGAATGGTGTATCCCTTAGTGGGGCAGGGGGAAGGGAACCAACATT
ATTTCTCTTTATGCGGAATCAAACAATTCCAGGATACGTTTTGTTTTCGTTTCCCGCAAAGCGA
AAGAGAATACGGTACTGTACTGATCAACTCTATATACATGCGTCAGTATTCCCTTACATATGCC
TGTGTCTTTTATAAATAGAACTGCTAGTGGGAGTGTGAGCTGTTTCAGCAGAGCCACTGCGCTA
GAGTTCCTTCTGTAAAATTGCAGTAAATAGAATTCCATAGATGGGTAGCGGGGTGCTATAGAAG
CAAGTTCTATGATCCTGGGGTTCATGGCCATAGTGTAAAACATCCGCAATTAGTTTTGGAGGTG
CTTAGCTGTAGCCTTACATCTTGACTTGCCAAGGATGGCGTAGAGACCTACTGTGCGCTTTGCC
AGTTGAGTCGGAACTAAGCCGTCTCGGAGCAGGGCGTTTAGGAAAGCAGGAAGCAAATGTCCGT
GGGCAATCAGTTGTTCACTGAGACTCATGAAACAGGTAGGTCGGCACGAGCCTTGGGTCAGAAC
TGCTTTTAAAGATTGAGTTTGACGTGGGGCTTGCCCATGAGGATGATAAAATTCCCTTACCTTT
AGGGCAATCTCATTGTGGACTGCTTTATTTATGATTAGTAACGCTGTTTTAAGTGTTAACCCTT
TTATTGTATTTTATTTATAAAAAATGGCTTTATATATTGAGATATATAAAATATAAATATAAAT
CTATATAATTGCCTTTATATTTAGGAGTTTGAGTTCTCCTTAGTGTGAGTTTCTGTGAACTTTC
ATGTTCTGCACAGTCACCAGAAATGGTTGTAGCAAGTGTCACTTCCCCGGGAATCAAGAGGACA
TAGGAAAAATGTGTGTGGGTGGGTGTGGGGGGGTCACCAGTCATTCCTACGTGGAATGGCATGC
ACTTGTGGAGGGACAATTGTTTATTGAGTTCCCTGTTTATTACTGTTATCTCATCTGACCCCCA
CAGCAAATAGACAGAGTAGGCATGAAGTTCTCAGCCCATGAGTGAGCTAGAGCCCGCACTGGAG
CCCAGTTCACCTGTCCCGTCACCCATGCCCCATTTACCTGCTTTCTGGAAGTGTTATGGTTCAC
CCTCCATGGAACCAGTCCAGAACGTGTGCATTGTCCACCCCTGCTGCGAACTTTCTCTGTGAGG
CTCCAACTGCAGCTGGTGGGGCTTCCCTCTGTCCACCCTCATCCCAAACTGACAGGGCTCTTAC
CAAGTACATCATCTTCAGGAATCTCTCTTTGATACCCTCCCCTTACCCTCACCCAACTCCTACC
CTCTCCTAACCCTGTGAACATTTAACCTTCAACTGGCTCACTGGCCATGAACCTGGTAGGGGCC
TCTTCATGTATTGGGTGAGTCTTCCTTTAGCGTTAAACTTCCCTAGGCCTAGTAAATTGTGTCA
CCTTTCCCTGGTTGTGTTCACCAATTACGTAGCCGACTCTGGTGACAGGTGCTATACAGGGTAT
AGGTTAATTGCGTCACTCTAAACCGTTGAGGTGATCTCACTGTTGAACGGTTTTTACTGGGTTC
TCTTTGTACAGTTGTTATTCCAGGCTGATGACGTCACTTCTCTGTGTCAGCCCCAGCACTACCA
GGAAACTGTGTGGAACTGTCCTTTACCTGTATTGCTCGCTCTGACCGTGTTGACCCTGAGATGC
ATGTTTTGTACTATATTGAAAAAAAATGTTTATTTTCCTTAAAGTTGTGCTATTATGTGTGAAA
TTGTACATACTCTAAGTGATGTAGTTTTGACCGGTTTTATTTGGTTGACATGATTTTATATTAA
AAGAGAATGCTGCTTTCA

hide sequence

RefSeq Acc Id:

XM_039082008 ⟹ XP_038937936

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	42,033,216 - 42,119,451 (+)	NCBI
mRatBN7.2	8	33,777,248 - 33,859,033 (+)	NCBI

RefSeq Acc Id:

XM_063266036 ⟹ XP_063122106

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	42,033,216 - 42,119,451 (+)	NCBI

RefSeq Acc Id:

XR_005487905

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	42,032,929 - 42,089,177 (+)	NCBI
mRatBN7.2	8	33,775,123 - 33,831,356 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_059054	(Get FASTA)	NCBI Sequence Viewer
	XP_006242853	(Get FASTA)	NCBI Sequence Viewer
	XP_006242854	(Get FASTA)	NCBI Sequence Viewer
	XP_006242855	(Get FASTA)	NCBI Sequence Viewer
	XP_038937936	(Get FASTA)	NCBI Sequence Viewer
	XP_063122106	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC34735	(Get FASTA)	NCBI Sequence Viewer
	EDL83270	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016247
	ENSRNOP00000085481
GenBank Protein	O35158	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_059054 ⟸ NM_017358
- Peptide Label:	precursor
- UniProtKB:	O35158 (UniProtKB/Swiss-Prot), G3V7K7 (UniProtKB/TrEMBL), A6JYK5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHPDLGPLWKLLYVLVILCSSVSSDLATYFISEPLSAVQKLGRPVVLHCSAKPVTARISWLHNG KRLDRNTEQIKIHRGTLTILSLNPSLSGCYQCVANNSVGAVVSGPATVSADALADFDSSTMHVI TAEKKNTGFIGCRVPESNPKAEVRYKIRGKWLMYSTGNYIILPSGNLQILNVSSKDKGSYKCAA YNPVTSELKVEPAGRKLLVSRPSSDGFHILHPALSQALAVLPHSPVTLECVVSGVPASQVYWLK DGQDCLSGSNWRRLYSHLATASIDPADSGNYSCVVGNNSSGDVKHVTYTVNVLEHASISKGLHD QKVSLGATVRFTCEVHGNPAPNRTWFHNAQPIRPSSRHLTEGSVLKITGVIMEDSGLYQCMADN GIGFMQSTGRLQIEQDSGQRPVIVTAPANVEVTDGDFVTLSCNATGEPVPVIHWYGRHGLITSH PSQVLRSKSRKSHLFRPGDLDPEPVYLIMSQAGSSSLSIQAVTREHAGKYTCEAVNKHGSTQSE AFLTVVPFETNTKAEPVTPSEASQNDERDPRDGSESGLLNLFPVKVHSGGVELPAEKNASVPDA PNILSPPQTHMPDTYTLVWRTGRDGGMPINAYFVKYRKLDDGSGAVGSWHTVRVPGSESELHLT ELEPSSLYEVLMVARSAVGEGQPAMLTFRTSKEKMASSKNTQASFPPVGIPKRPVTSEASNSNF GVVLTDSSRHSGVPEAPDRPTISMASETSVYVTWIPRANGGSPITAFKVEYKRMKSSDWLVAAE DIPPSKLSVEVRSLEPGSIYKFRVIVINHYGESFRSSASRPYQVAGFPNRFSNRPITGPHIAYT EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHTIGHLQPETS YDIKMQCFNEGGESEFSNVMICETKVKRVPGASEYPMKELSTPPSSSGNGGNVGPATSPARSSD MLYLIVGCVLGVMVLILLVFIALCLWKSRQQSAIQKYDPPGYLYQGSEINGQMVEYTTLSGTAR INGSVHGGFLSKGSLSNGCSHLHHKGPNGVNGILNGTINGGLYSAHTSSLTRTCVEFEHPHHLV NGGAVYTAVPQMDPLECINCRNCRNNNRCFTKTNSPLPVVPVVASYPQDGLEMKPLGVMKFPVC PVSTVPDGGQIPEECLKDSVAPAPTQRTCRQDNTSDINSDSTEDTAEFNRGDSSGHSEAEDKVF SWSPLILSPVLEDCSEKTAWSPPGPPLDGLSVVLQQAQET hide sequence

RefSeq Acc Id:

XP_006242853 ⟸ XM_006242791

- Peptide Label:

isoform X1

- Sequence:

show sequence

MHPDLGPLWKLLYVLVILCSSVSSDLAPYFISEPLSAVQKLGRPVVLHCSAKPVTARISWLHNG
KRLDRNTEQIKIHRGTLTILSLNPSLSGCYQCVANNSVGAVVSGPATVSAAALADFDSSTMHVI
TAEEKNTGFIGCRVPESNPKAEVRYKIRGKWLMYSTGNYIILPSGNLQILNVSSKDKGSYKCAA
YNPVTSELKVEPAGRKLLVSRPSSDGFHILHPALSQALAVLPHSPVTLECVVSGVPASQVYWLK
DGQDALSGSNWRRLYSHLATASIDPADSGNYSCVVGNNRSGDVKHVTYTVNVLEHASISKGLHD
QKVSLGATVRFTCEVHGNPAPNRTWFHNAQPIRPSSRHLTEGSVLKITGVIMEDSGLYQCMADN
GIGFMQSTGRLQIEQDSGQRPVIVTAPANVEVTDGDFVTLSCNATGEPVPVIHWYGRHGLITSH
PSQVLRSKSRKSHLFRPGDLDPEPVYLIMSQAGSSSLSIQAVTWEHAGKYTCEAVNKHGSTQSE
AFLTVVPFETNTKAEPVTPSEASQNDERDPRDGSESGLLNLFPVKVHSGGVELPAEKNASVPDA
PNILSPPQTHMPDTYTLVWRAGRDGGMPINAYFVKYRKLDDGSGAVGSWHTVRVPGSESELHLT
ELEPSSLYEVLMVARSAVGEGQPAMLTFRTSKEKMASSKNTQASFPPVGIPKRPVTSEASNSNF
GVVLTDSSRHSGVPEAPDRPTISMASETSVYVTWIPRANGGSPITAFKVEYKRMKSSDWLVAAE
DIPPSKLSVEVRSLEPGSIYKFRVIAINHYGESFRSSASRPYQVAGFPNRFSNRPITGPHIAYT
EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHTIGHLQPETS
YDIKMQCFNEGGESEFSNVMICETKVKRVPGASEYPMKELSTPPSSSGNGGNVGPATSPARSSD
MLYLIVGCVLGVMVLILLVFIALCLWKSRQQSAIQKYDPPGYLYQGSEINGQMVEYTTLSGTAR
INGSVHGGFLSKGSLSNGCSHLHHKGPNGVNGILNGTINGGLYSAHTSSLTRTCVEFEHPHHLV
NGGAVYTAVPQMDPLECINCRNCRNNNRCFTKTNSPLPVVPVVASYPQDGLEMKPLGVMKFPVC
PVSTVPDGGQIPEECLKDSVAPAPTQRTCRQDNTSDINSDSTEDTAEFNRGDSSGHSEAEDKVF
SWSPLILSPVLEDCSEKTAWSPPGPPLDGLSVVLQQAQET

hide sequence

RefSeq Acc Id:	XP_006242855 ⟸ XM_006242793
- Peptide Label:	isoform X2
- UniProtKB:	O35158 (UniProtKB/Swiss-Prot), A0A8I6A2E2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHPDLGPLWKLLYVLVILCSSVSSDLAPYFISEPLSAVQKLGRPVVLHCSAKPVTARISWLHNG KRLDRNTEQIKIHRGTLTILSLNPSLSGCYQCVANNSVGAVVSGPATVSAAALADFDSSTMHVI TAEEKNTGFIGCRVPESNPKAEVRYKIRGKWLMYSTGNYIILPSGNLQILNVSSKDKGSYKCAA YNPVTSELKVEPAGRKLLVSRPSSDGFHILHPALSQALAVLPHSPVTLECVVSGVPASQVYWLK DGQDALSGSNWRRLYSHLATASIDPADSGNYSCVVGNNRSGDVKHVTYTVNVLEHASISKGLHD QKVSLGATVRFTCEVHGNPAPNRTWFHNAQPIRPSSRHLTEGSVLKITGVIMEDSGLYQCMADN GIGFMQSTGRLQIEQVPFETNTKAEPVTPSEASQNDERDPRDGSESGLLNLFPVKVHSGGVELP AEKNASVPDAPNILSPPQTHMPDTYTLVWRAGRDGGMPINAYFVKYRKLDDGSGAVGSWHTVRV PGSESELHLTELEPSSLYEVLMVARSAVGEGQPAMLTFRTSKEKMASSKNTQASFPPVGIPKRP VTSEASNSNFGVVLTDSSRHSGVPEAPDRPTISMASETSVYVTWIPRANGGSPITAFKVEYKRM KSSDWLVAAEDIPPSKLSVEVRSLEPGSIYKFRVIAINHYGESFRSSASRPYQVAGFPNRFSNR PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWH TIGHLQPETSYDIKMQCFNEGGESEFSNVMICETKVKRVPGASEYPMKELSTPPSSSGNGGNVG PATSPARSSDMLYLIVGCVLGVMVLILLVFIALCLWKSRQQSAIQKYDPPGYLYQGSEINGQMV EYTTLSGTARINGSVHGGFLSKGSLSNGCSHLHHKGPNGVNGILNGTINGGLYSAHTSSLTRTC VEFEHPHHLVNGGAVYTAVPQMDPLECINCRNCRNNNRCFTKTNSPLPVVPVVASYPQDGLEMK PLGVMKFPVCPVSTVPDGGQIPEECLKDSVAPAPTQRTCRQDNTSDINSDSTEDTAEFNRGDSS GHSEAEDKVFSWSPLILSPVLEDCSEKTAWSPPGPPLDGLSVVLQQAQET hide sequence

RefSeq Acc Id:	XP_006242854 ⟸ XM_006242792
- Peptide Label:	isoform X1
- UniProtKB:	O35158 (UniProtKB/Swiss-Prot), G3V7K7 (UniProtKB/TrEMBL), A6JYK5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHPDLGPLWKLLYVLVILCSSVSSDLAPYFISEPLSAVQKLGRPVVLHCSAKPVTARISWLHNG KRLDRNTEQIKIHRGTLTILSLNPSLSGCYQCVANNSVGAVVSGPATVSAAALADFDSSTMHVI TAEEKNTGFIGCRVPESNPKAEVRYKIRGKWLMYSTGNYIILPSGNLQILNVSSKDKGSYKCAA YNPVTSELKVEPAGRKLLVSRPSSDGFHILHPALSQALAVLPHSPVTLECVVSGVPASQVYWLK DGQDALSGSNWRRLYSHLATASIDPADSGNYSCVVGNNRSGDVKHVTYTVNVLEHASISKGLHD QKVSLGATVRFTCEVHGNPAPNRTWFHNAQPIRPSSRHLTEGSVLKITGVIMEDSGLYQCMADN GIGFMQSTGRLQIEQDSGQRPVIVTAPANVEVTDGDFVTLSCNATGEPVPVIHWYGRHGLITSH PSQVLRSKSRKSHLFRPGDLDPEPVYLIMSQAGSSSLSIQAVTWEHAGKYTCEAVNKHGSTQSE AFLTVVPFETNTKAEPVTPSEASQNDERDPRDGSESGLLNLFPVKVHSGGVELPAEKNASVPDA PNILSPPQTHMPDTYTLVWRAGRDGGMPINAYFVKYRKLDDGSGAVGSWHTVRVPGSESELHLT ELEPSSLYEVLMVARSAVGEGQPAMLTFRTSKEKMASSKNTQASFPPVGIPKRPVTSEASNSNF GVVLTDSSRHSGVPEAPDRPTISMASETSVYVTWIPRANGGSPITAFKVEYKRMKSSDWLVAAE DIPPSKLSVEVRSLEPGSIYKFRVIAINHYGESFRSSASRPYQVAGFPNRFSNRPITGPHIAYT EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHTIGHLQPETS YDIKMQCFNEGGESEFSNVMICETKVKRVPGASEYPMKELSTPPSSSGNGGNVGPATSPARSSD MLYLIVGCVLGVMVLILLVFIALCLWKSRQQSAIQKYDPPGYLYQGSEINGQMVEYTTLSGTAR INGSVHGGFLSKGSLSNGCSHLHHKGPNGVNGILNGTINGGLYSAHTSSLTRTCVEFEHPHHLV NGGAVYTAVPQMDPLECINCRNCRNNNRCFTKTNSPLPVVPVVASYPQDGLEMKPLGVMKFPVC PVSTVPDGGQIPEECLKDSVAPAPTQRTCRQDNTSDINSDSTEDTAEFNRGDSSGHSEAEDKVF SWSPLILSPVLEDCSEKTAWSPPGPPLDGLSVVLQQAQET hide sequence

Ensembl Acc Id:

ENSRNOP00000016247 ⟸ ENSRNOT00000016248

RefSeq Acc Id:	XP_038937936 ⟸ XM_039082008
- Peptide Label:	isoform X1
- UniProtKB:	O35158 (UniProtKB/Swiss-Prot), G3V7K7 (UniProtKB/TrEMBL), A6JYK5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000085481 ⟸ ENSRNOT00000103041

RefSeq Acc Id:	XP_063122106 ⟸ XM_063266036
- Peptide Label:	isoform X1
- UniProtKB:	O35158 (UniProtKB/Swiss-Prot), A6JYK5 (UniProtKB/TrEMBL), G3V7K7 (UniProtKB/TrEMBL)

Protein Domains

Fibronectin type-III Ig-like Ig-like C2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O35158-F1-model_v2	AlphaFold	O35158	1-1256	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:708433	AgrOrtholog
BioCyc Gene	G2FUF-31174	BioCyc
Ensembl Genes	ENSRNOG00000011789	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000016248	ENTREZGENE
	ENSRNOT00000103041	ENTREZGENE
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot
InterPro	FN3_dom	UniProtKB/Swiss-Prot
	FN3_sf	UniProtKB/Swiss-Prot
	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_I-set	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_sub2	UniProtKB/Swiss-Prot
KEGG Report	rno:50938	UniProtKB/Swiss-Prot
NCBI Gene	50938	ENTREZGENE
PANTHER	CELL ADHESION MOLECULE-RELATED_DOWN-REGULATED BY ONCOGENES	UniProtKB/Swiss-Prot
	PROTEIN SIDEKICK	UniProtKB/Swiss-Prot
Pfam	fn3	UniProtKB/Swiss-Prot
	I-set	UniProtKB/Swiss-Prot
	Ig_3	UniProtKB/Swiss-Prot
PhenoGen	Cdon	PhenoGen
PROSITE	FN3	UniProtKB/Swiss-Prot
	IG_LIKE	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000011789	RatGTEx
SMART	FN3	UniProtKB/Swiss-Prot
	IGc2	UniProtKB/Swiss-Prot
	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48726	UniProtKB/Swiss-Prot
	SSF49265	UniProtKB/Swiss-Prot
UniProt	A0A8I6A2E2	ENTREZGENE, UniProtKB/TrEMBL
	A6JYK5	ENTREZGENE, UniProtKB/TrEMBL
	CDON_RAT	UniProtKB/Swiss-Prot
	G3V7K7	ENTREZGENE, UniProtKB/TrEMBL
	O35158	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-12-18	Cdon	cell adhesion associated, oncogene regulated	Cdon	Cdon homolog (mouse)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-09	Cdon	Cdon homolog (mouse)	Cdon	cell adhesion molecule-related/down-regulated by oncogenes	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Cdon	cell adhesion molecule-related/down-regulated by oncogenes	Cdo	immunoglobulin superfamily member	Symbol and Name updated	1299863	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed at low levels in most adult rat tissues	1299440
gene_regulation	rapidly and transiently down-regulated by serum stimulation and constitutively down-regulated in oncogene-transformed cells	1299440

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)