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Gene: Ssbp3 (single stranded DNA binding protein 3) Rattus norvegicus
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Symbol: Ssbp3
Name: single stranded DNA binding protein 3
Description: Predicted to have RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in several processes, including nervous system development; positive regulation of anterior head development; and protein-containing complex assembly. Predicted to localize to the nucleus and protein-containing complex. Orthologous to human SSBP3 (single stranded DNA binding protein 3); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC102549605; MGC124589; sequence-specific single-stranded-DNA-binding protein; single-stranded DNA-binding protein 3; Ssdp; Ssdp3; uncharacterized LOC102549605
Orthologs:
Homo sapiens (human) : SSBP3 (single stranded DNA binding protein 3)  HGNC  Alliance
Mus musculus (house mouse) : Ssbp3 (single-stranded DNA binding protein 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ssbp3 (single stranded DNA binding protein 3)
Pan paniscus (bonobo/pygmy chimpanzee) : SSBP3 (single stranded DNA binding protein 3)
Canis lupus familiaris (dog) : SSBP3 (single stranded DNA binding protein 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ssbp3 (single stranded DNA binding protein 3)
Sus scrofa (pig) : SSBP3 (single stranded DNA binding protein 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05126,511,339 - 126,649,830 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05130,364,154 - 130,500,627 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45127,987,980 - 128,127,771 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15127,993,205 - 128,132,997 (+)NCBI
Celera5120,438,879 - 120,575,397 (+)NCBICelera
Cytogenetic Map5q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ssbp3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621502
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-06-11
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.