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Gene: Tacc1 (transforming, acidic coiled-coil containing protein 1) Rattus norvegicus

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Symbol:

Tacc1

Name:

transforming, acidic coiled-coil containing protein 1

RGD ID:

1303120

Description:

Predicted to enable several functions, including nuclear receptor binding activity; peroxisome proliferator activated receptor binding activity; and transcription coactivator activity. Predicted to be involved in cerebral cortex development; microtubule cytoskeleton organization; and nuclear migration. Predicted to act upstream of or within interkinetic nuclear migration; neurogenesis; and regulation of microtubule-based process. Predicted to be located in cytosol. Predicted to be active in cytoplasm. Orthologous to human TACC1 (transforming acidic coiled-coil containing protein 1); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Tacc1a; transforming acidic coiled-coil-containing protein 1; transforming, acidic coiled-coil containing protein 1a

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	73,515,016 - 73,598,395 (+)	NCBI		GRCr8
mRatBN7.2	16	66,812,232 - 66,895,736 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	66,812,295 - 66,895,733 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	72,122,245 - 72,172,933 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	75,528,196 - 75,578,884 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	70,776,526 - 70,827,234 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	71,596,970 - 71,681,126 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	71,629,525 - 71,681,126 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	71,252,762 - 71,335,563 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	71,241,785 - 71,304,959 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	71,242,049 - 71,305,224 (+)	NCBI
Celera	16	64,752,412 - 64,802,875 (+)	NCBI		Celera
Cytogenetic Map	16	q12.4	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

epilepsy (ISO)

hereditary spastic paraplegia 54 (ISO)

hypogonadotropic hypogonadism 2 with or without anosmia (ISO)

paraplegia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

17beta-hydroxy-17-methylestra-4,9,11-trien-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,4-methylenedioxymethamphetamine (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP)

5-aza-2'-deoxycytidine (ISO)

acetamide (EXP)

actinomycin D (ISO)

afimoxifene (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

Aroclor 1254 (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-hexachlorocyclohexane (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

caffeine (ISO)

carbon nanotube (ISO)

cisplatin (ISO)

clofibrate (ISO)

cocaine (EXP)

copper(II) sulfate (ISO)

coumarin (ISO)

cycloheximide (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dioxygen (EXP)

diuron (EXP)

dorsomorphin (ISO)

endosulfan (EXP)

entinostat (ISO)

ethanol (ISO)

fenthion (ISO)

FR900359 (ISO)

fulvestrant (ISO)

furan (EXP)

genistein (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

ivermectin (ISO)

lead(0) (ISO)

lipopolysaccharide (ISO)

menadione (ISO)

mercury dibromide (ISO)

methidathion (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

nitrates (ISO)

Nutlin-3 (ISO)

ozone (ISO)

panobinostat (ISO)

paracetamol (ISO)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

propiconazole (ISO)

raloxifene (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium dichromate (EXP)

tamoxifen (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

trichostatin A (ISO)

tungsten (ISO)

valproic acid (EXP,ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell population proliferation (ISO)

cerebral cortex development (IBA,ISO)

interkinetic nuclear migration (ISO)

microtubule cytoskeleton organization (IBA,ISO)

mitotic spindle organization (IEA)

neurogenesis (ISO)

nuclear migration (IBA)

positive regulation of DNA-templated transcription (IEA)

regulation of microtubule-based process (ISO)

Cellular Component

cytoplasm (IBA,IEA)

cytoskeleton (IEA)

cytosol (ISO)

Molecular Function

nuclear estrogen receptor binding (ISO)

nuclear glucocorticoid receptor binding (ISO)

nuclear receptor binding (ISO)

nuclear retinoic acid receptor binding (ISO)

nuclear retinoid X receptor binding (ISO)

nuclear thyroid hormone receptor binding (ISO)

peroxisome proliferator activated receptor binding (ISO)

protein binding (ISO)

protein domain specific binding (ISO)

transcription coactivator activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Aurora B -TACC1 protein complex in cytokinesis.	Delaval B, etal., Oncogene 2004 Jun 3;23(26):4516-22.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Structure-function evolution of the transforming acidic coiled coil genes revealed by analysis of phylogenetically diverse organisms.	Still IH, etal., BMC Evol Biol 2004 Jun 18;4(1):16.

Additional References at PubMed

PMID:8889548	PMID:16778019	PMID:17920017	PMID:20078863

Genomics

Comparative Map Data

Tacc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	73,515,016 - 73,598,395 (+)	NCBI		GRCr8
mRatBN7.2	16	66,812,232 - 66,895,736 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	66,812,295 - 66,895,733 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	72,122,245 - 72,172,933 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	75,528,196 - 75,578,884 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	70,776,526 - 70,827,234 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	71,596,970 - 71,681,126 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	71,629,525 - 71,681,126 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	71,252,762 - 71,335,563 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	71,241,785 - 71,304,959 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	71,242,049 - 71,305,224 (+)	NCBI
Celera	16	64,752,412 - 64,802,875 (+)	NCBI		Celera
Cytogenetic Map	16	q12.4	NCBI

TACC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	38,728,582 - 38,853,028 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	38,728,186 - 38,853,028 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	38,586,100 - 38,710,546 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	38,763,938 - 38,829,703 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	38,763,937 - 38,829,702	NCBI
Celera	8	37,539,007 - 37,663,880 (+)	NCBI		Celera
Cytogenetic Map	8	p11.22	NCBI
HuRef	8	37,121,058 - 37,245,998 (+)	NCBI		HuRef
CHM1_1	8	38,787,711 - 38,912,550 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	39,005,551 - 39,130,036 (+)	NCBI		T2T-CHM13v2.0

Tacc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	25,644,568 - 25,730,901 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	25,644,568 - 25,746,604 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	25,154,552 - 25,256,424 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	25,154,552 - 25,256,588 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	26,265,024 - 26,311,921 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	26,620,097 - 26,666,994 (-)	NCBI		MGSCv36	mm8
Celera	8	26,621,682 - 26,668,549 (-)	NCBI		Celera
Cytogenetic Map	8	A2	NCBI
cM Map	8	13.7	NCBI

Tacc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955463	14,344,010 - 14,405,174 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955463	14,314,201 - 14,409,848 (+)	NCBI	ChiLan1.0	ChiLan1.0

TACC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	57,290,547 - 57,415,122 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	33,007,787 - 33,132,605 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	38,029,394 - 38,154,189 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	35,205,047 - 35,329,134 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	35,219,219 - 35,329,134 (+)	Ensembl	panpan1.1		panPan2

TACC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	26,677,717 - 26,797,236 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	26,682,327 - 26,797,937 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	27,198,235 - 27,317,459 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	28,508,867 - 28,628,253 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	28,513,461 - 28,627,972 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	26,802,061 - 26,891,394 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	27,379,067 - 27,498,300 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	27,417,631 - 27,537,073 (-)	NCBI		UU_Cfam_GSD_1.0

Tacc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	49,303,964 - 49,391,262 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936710	2,042,671 - 2,157,249 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TACC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	15	47,749,079 - 47,861,200 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	54,862,923 - 54,911,509 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TACC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	36,752,966 - 36,871,609 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	36,774,647 - 36,866,586 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666052	5,108,644 - 5,235,356 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tacc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624780	4,771,789 - 4,847,317 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624780	4,769,270 - 4,886,475 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tacc1
424 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	613
Count of miRNA genes:	274
Interacting mature miRNAs:	358
Transcripts:	ENSRNOT00000035347
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300163	Bmd64	Bone mineral density QTL 64	5.3	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	16	37752156	82752156	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	380245	80345693	Rat
70215	Niddm29	Non-insulin dependent diabetes mellitus QTL 29	3.54		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	16	19004435	75226532	Rat
1578768	Stresp22	Stress response QTL 22	2.8		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	16	35288870	80288870	Rat
7205510	Activ5	Activity QTL 5	3.78	0.00028	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	42396345	84729064	Rat
631525	Pia14	Pristane induced arthritis QTL 14	4.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	16	55711087	83402471	Rat
8694453	Bw172	Body weight QTL 172	8.33	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	16	24325513	69325513	Rat
7411648	Foco22	Food consumption QTL 22	15	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	52726464	84729064	Rat
6903294	Stl30	Serum triglyceride level QTL 30	2.6	0.0013	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	16	25152793	70152793	Rat
2293690	Bss45	Bone structure and strength QTL 45	5.13	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	16	37752156	82752156	Rat
8694364	Abfw7	Abdominal fat weight QTL 7	12.22	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	16	52726464	84729064	Rat
8694429	Bw164	Body weight QTL 164	5	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	16	52726464	84729064	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17696791	82635055	Rat

Markers in Region

D16Got66

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	66,858,880 - 66,859,095 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	71,643,358 - 71,643,572	NCBI	Rnor6.0
Rnor_5.0	16	71,298,290 - 71,298,504	UniSTS	Rnor5.0
RGSC_v3.4	16	71,267,882 - 71,268,097	RGD	RGSC3.4
RGSC_v3.4	16	71,267,883 - 71,268,097	UniSTS	RGSC3.4
RGSC_v3.1	16	71,268,148 - 71,268,362	RGD
Celera	16	64,766,097 - 64,766,311	UniSTS
RH 3.4 Map	16	628.4	UniSTS
RH 3.4 Map	16	628.4	RGD
RH 2.0 Map	16	739.6	RGD
Cytogenetic Map	16	q12.4	UniSTS

BE113007

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	66,894,770 - 66,894,927 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	71,680,164 - 71,680,320	NCBI	Rnor6.0
Rnor_5.0	16	71,334,601 - 71,334,757	UniSTS	Rnor5.0
RGSC_v3.4	16	71,303,996 - 71,304,152	UniSTS	RGSC3.4
Celera	16	64,801,913 - 64,802,069	UniSTS
RH 3.4 Map	16	624.3	UniSTS
Cytogenetic Map	16	q12.4	UniSTS

AA956912

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	66,894,383 - 66,894,512 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	71,679,777 - 71,679,905	NCBI	Rnor6.0
Rnor_5.0	16	71,334,214 - 71,334,342	UniSTS	Rnor5.0
RGSC_v3.4	16	71,303,609 - 71,303,737	UniSTS	RGSC3.4
Celera	16	64,801,526 - 64,801,654	UniSTS
RH 3.4 Map	16	632.8	UniSTS
Cytogenetic Map	16	q12.4	UniSTS

AI008689

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	66,895,245 - 66,895,407 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	71,680,639 - 71,680,800	NCBI	Rnor6.0
Rnor_5.0	16	71,335,076 - 71,335,237	UniSTS	Rnor5.0
RGSC_v3.4	16	71,304,472 - 71,304,633	UniSTS	RGSC3.4
Celera	16	64,802,388 - 64,802,549	UniSTS
RH 3.4 Map	16	624.5	UniSTS
Cytogenetic Map	16	q12.4	UniSTS

RH132384

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	66,869,351 - 66,869,552 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	71,653,829 - 71,654,029	NCBI	Rnor6.0
Rnor_5.0	16	71,308,761 - 71,308,961	UniSTS	Rnor5.0
RGSC_v3.4	16	71,278,231 - 71,278,431	UniSTS	RGSC3.4
Celera	16	64,776,568 - 64,776,768	UniSTS
RH 3.4 Map	16	633.2	UniSTS
Cytogenetic Map	16	q12.4	UniSTS

RH137203

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	16	73,597,564 - 73,598,106 (+)	Marker Load Pipeline
mRatBN7.2	16	66,894,905 - 66,895,447 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	71,680,299 - 71,680,840	NCBI	Rnor6.0
Rnor_5.0	16	71,334,736 - 71,335,277	UniSTS	Rnor5.0
RGSC_v3.4	16	71,304,131 - 71,304,673	UniSTS	RGSC3.4
Celera	16	64,802,048 - 64,802,589	UniSTS
RH 3.4 Map	16	631.6	UniSTS
Cytogenetic Map	16	q12.4	UniSTS

RH140240

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	66,894,491 - 66,894,677 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	71,679,885 - 71,680,070	NCBI	Rnor6.0
Rnor_5.0	16	71,334,322 - 71,334,507	UniSTS	Rnor5.0
RGSC_v3.4	16	71,303,717 - 71,303,902	UniSTS	RGSC3.4
Celera	16	64,801,634 - 64,801,819	UniSTS
RH 3.4 Map	16	623.2	UniSTS
Cytogenetic Map	16	q12.4	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001004107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC117980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE113007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ193303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ211635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB324718	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ736163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000035347 ⟹ ENSRNOP00000030626

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	66,845,041 - 66,895,733 (+)	Ensembl
Rnor_6.0 Ensembl	16	71,629,525 - 71,681,126 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000088462 ⟹ ENSRNOP00000075027

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	66,845,041 - 66,895,733 (+)	Ensembl
Rnor_6.0 Ensembl	16	71,629,659 - 71,676,254 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097760 ⟹ ENSRNOP00000078214

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	66,844,813 - 66,895,733 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106912 ⟹ ENSRNOP00000092100

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	66,812,295 - 66,895,733 (+)	Ensembl

RefSeq Acc Id:

NM_001004107 ⟹ NP_001004107

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,547,704 - 73,598,392 (+)	NCBI
mRatBN7.2	16	66,845,041 - 66,895,733 (+)	NCBI
Rnor_6.0	16	71,629,525 - 71,681,126 (+)	NCBI
Rnor_5.0	16	71,252,762 - 71,335,563 (+)	NCBI
RGSC_v3.4	16	71,241,785 - 71,304,959 (+)	RGD
Celera	16	64,752,412 - 64,802,875 (+)	NCBI

Sequence:

show sequence

GAGCAGGACTGGGGGACAGGCAGGCGGGCGGGCGCGCGCGGGGGCGAGCTTCGGCGCGGCGGCC
CCGAGGAGCGGGGGCGAGCGGCGCTGCGGGGCCGTGGGAGGAAGCGCTGCGCCCGGCCCGACGG
CGCTCGTTGAGCCACATCCGCGGGTCGCCGGCGACGTTGCCGGCGCCTGTCAAGGCCCCTCCAT
TTTGAAGGAAGAGGCCGCCGTTTCCCCACCGCAGGGGCGGTAGCCGCGCTCATGGCGTTCAGTC
CCTGGCAGATCCTGTCGCCCGTGCAGTGGGCCAAGTGGACGTGGTCCGCGGTGCGCGGTTCGGG
CGCGGGAGAGGACGAAGCTGGAGGTCCCGAAGGCGACCCCGAGGAGGAAGAGGACTCGCAAGCC
GAGACCAAATCCCTGAGTTTCAGCTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAA
CTCCAATCAGATCGTCTCTCAAGGAGTCTTGTGATTCATCACTAGGATTGTCAGAACCCGAGGC
CAAACCCCAAGAATCACGAGAAGCCGATGAACAGCCGGTAGCAGAATTAATTGAAAAATGCTCG
CCTGATGCGTGTTCTAGATCTTCAGGAAATGAAGCGCCACAGGCCACTATCGATTCTTACTCAG
TCAAGGATGTCAGAGGGAAGGCGGAACATGATGTTAGCAAGATCTCAGTAGTGAGGCCGTTTTC
CATAGAAACCAGGGACTGCACAGATGACCCTGCTGCTCATGGCTGTGTCCCTGTGCTCCCAGGC
AAGGCCTTGCCTTCCACCACACCCGAAGCCACTCAGGACCAGCCAATGATGGACAGAGGCATGG
GGGTTACATTGGAGGCTTTTACAGAAGTCAATCTGAAGACTGGAGGCCCCTGCCCAGAGCCTGT
GCCCAGCAGAAGCAGGCTAAGAAAGCCCAAGCCTGTCTCCCTGAGGAAGAAGACAGCTGGGGAC
AACACCTTTGAACCCGAAATGTTGATGGAGGGTTCACTTCTCCCTAAGGCTTCCTCCCCGTGGA
TTCCTGAGGAGTCTGATAAGAACTCGAATCCTAGTTTGCTGAGAGGCTTGAGGGCCCACAAATC
TCCCCTTAACCTTAAAGAAGCTGCTAGCATTCACTGTAACAGCGCCGGTGACTCGGGGGTTGAT
CTGCAGGAGGGGTCCAGGGCCTCACCTCTCAAACTTGATGATTTTACAGAAGACGGGCGGAGTG
TCGAGACCAGGAGTGCCCTTCCGAAGCAGCCTGGCAGGAAACCCAGCCACAAACTGGCACCCAA
TATACGAAAAGATGGCTCCAGTAAGCCAGTAGGTGTTGAGCAGCTCACAGACCCAACCATTGAA
GATGCCTCCCTCGCCCAGACGTCTCCCAAGTTAGACCCAAGTAAATGGGGTCGTCCTAACTTTA
ATTCCTTCGGGAGCTGCCCCATTTTGCAGAGCTCCCCGCCCGTCTCCTCCAAAGGTTCCTACCA
CCTTGACCCAGATAACGTTAACGCCGATGAATCCGGGGACCCCTGTAAGCCGGCGACAGCTTTG
ACAGGCAGCGGCTTTTGCTCTGCCACTGGTAATCATGTTAATGAAATCTTAGACTCACCCAAGA
AGGCACAGTCGCGTTTAATAACGAGTGGCTGCAAGGTGAAGAAATACGAAACTCAGTCTCTTGA
TTTGGACGCTTGTTCTCAGGATGAAGGAGCCGTGATCTCACAGATTGCAGACATTCCTAATCGG
GACGGGCACGCCACCGATGAGGAGAAGCTGGCGTCCACGTCGTGTAGTCAGAAGTCAGCCGGGG
CTGAAGTGAAAGGCGTAGAAAAGGAGGCATACCAGAAGATGGAGGAGGAGGAGCTGACTGTGCA
TGGACTGCTGGAGACCTCTTCAGAAAAGGCCCCCGTGTCTGTGGCCTGTGGAGGTGAGAGCCCT
CTGGATGGGATCTGCCTCAGTGAAGCAGACAAGACTGCTGTGCTTACATTGATCAGAGAAGAGA
TCATCACGAAAGAGATTGAAGCAAATGAATGGAAGAAGAAATACGAAGAGACCCGAGAAGAAGT
CCTGGAGATGAGGAAAATTGTGGCAGAATATGAAAAGACCATTGCCCAAATGATCGAAGACGAG
CAGAGGACAAACATGAGCTCTCAGAAGAGTTTCCAGCAGCTGACTATGGAGAAGGAGCAGGCTC
TGGCTGACCTGAACTCTGTGGAAAGGTCCCTTTCTGATCTCTTCAGAAGATATGAAAACCTGAA
AGGCGTGCTAGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAAAAGTGTGCTCAGGATTACTTA
GCCAGAGTGAAGCAGGAAGAGCAGCGCTACCAGGCCCTGAAGGTCCACGCTGAGGAAAAGCTGG
ACAGAGCCAACGAGGAAATCGCTCAGGTTCGGTCCAAGGCGAAGGCTGAGAGTGCGGCTCTCCA
TGCTGGACTCCGGAGGGAGCAGATGAAGGTGGAGTCCCTGGAGAGGGCCCTTCAGCAGAAGAAT
CAAGAGATTGAAGAACTGACAAAAATCTGTGACGAGTTGATCGCAAAGCTTGGAAAGGCCGACT
GAGAGTCGTCCCGTGAGCTGTGCAGATCCGAGTCTGGCTGCTTCTGTCGTGACCACATTATCTT
GCCTTATCCAGAAATATCTCCCCCCTTTGCAGAGAAAAATAACTGTTTCAAAAGCACATGCCTG
CTGCTGCCCGCCTGTCCGTCCCGCTTCGCCGCGCGCAGCTGTGGCCAGGCTGGTGGAGATGGAG
TCACGTGACCGCAGAGCCCCGCGACCAGGCTGCCAGCTTCCCTTAGGCACGCTGCTGCTGGGTC
CGGCTTATGCTTCTCCAACTTGAGTTCATCTCGCTGTCGTCCTTGCTTTTCCCAAGTTTGTGAC
ATTTCTAATTTTGTGGCAACTGTGTGGGTTTATCTTCCCAGCTCCTGATATTTCTATGGCCTAG
TTAACCTTTAAAATTTTCAGGATCGTCAGTTTTATCGAAGCGGGGGACGGTCTGGCCCATCATT
ACGAACACTTTGTCTAGGAGGCTCCAAGCTCCCTTTTATTTACAGACTGTACATTCTGCTGCTC
CCCACCCCACCCCCTCGATGCAGATAAGAGCCTCTAGGGAGGAGTTTGGCTACATAAATAAATA
TAGACTCTTATTTTGAAACAGAGCCGTAGGTCTAAAAGCCAGCTTCAGACTTCACAGGGGCTGG
GAATGTAGCTCCGTTAGTAGACAGCTTCCTGTACACAGAGCCCTGGGTTTGGCCCCCAGAATGT
TGGAGGGCGTGCCTGTAACCCAACCCTCCAGAGGTGGAGACAGGCTGATGAGAAATTTGAGGTC
ATCCTCAACTACATAGCCACTCGGAGGCCAGCCTGGACTAACTACATGGGGCCTTGCTTTACAC
AAGGAGTGAGTGGAAGCATGGGGTATCCTAGCTAGTGGGAGATGGGACAGGACGATCACTTGAG
CCCAGAATTTAAGGACAGCAGTGCACCAGGCAAATAGTCCTTTTCTCAAAAATCCTACTAAACC
TTGAGTCAGGGTGGAGAGGTTGAGCGTGTGAAGGCCAGGGGACATAGGTTTCACGTCTAGGGAA
GATTTGCTGTGCCGTCTCTTGCCCCGGTATTTGGACACCTCAGAAGCTCAGCGTGGCCCCACGC
GCTCATGCTGAAAGCAGCATCACGTGACCAGCAGCATAAACCTCCCTCAGAGTTGGCCTAGGCT
GCATGTGTCCACTTGGGGCCGGTTAGTCTCCGAAACAAAGTCAACTTTTGTCATCTATTTGAAA
CACACACAAATGGGACTTGGGAAAGGTTTAGTTGATCTTGTTAAAAGATGGTGGACGCTTACAA
ACCAGTTAGAGTGAAGATCCTTAATCTTCTATGTTTACTAGCAGACAGCACCCTTTTAGAGACT
TAAAAACAACAGCCACAACAAATTCTTCCTTCCTTACTCAAGCTGGGTTTTAAAACAAAACAGG
CAGTAAAGAGTCCAGTAGCTCCCCTGGGCATATTTTAAGCAAAGACTGCTTGAATGCTGGGGAG
GGGAATAGGGAGAAGTTCCACATAGACAAAACAAAAGTCTGTGAACTCATACTGGACTTACACT
GGGGGACATTAACCCCCAAATAAGAATACCCCACATTGGCACTGGTGACTTCCTTTCCATGATA
GGCAAAGCCAAACCCATTTAGGTTTTATTGCTTTTATTTTGCCTTAATCTTAACACCCTGAGTC
TTCATAGTAAGTGTACACTATTTAGTACACATATATTTTCCTCCTTGTAACACCGTTGCATGAG
CCAAGTCCAGCAATGAATTGTGCCTCGTAGAGAGCCTCCATAGATCTTATAAACAGTGTCCTTA
GCAGCGCGTTACCATGTGGTGTAACCTTTAGCCCCAGGGAAGCAATGTCTTTTCAAGCTAGAAA
TCACATCTTGTCAATATGCATTTATTATAACAGGTGCTTAAGTTAGGCTGTATCCTGAGGCCTA
CTGTCTTTTAACCTTTTGTACAAAAAAACACAAGCAGACAGAAGTTATCTGTGGTTGGAGAAAT
GGCTTGACAATCATTTGGGCTCTGAATTTAGTCACAGTGGCTTAACGTGAAGCCCATAGCAGTA
CATGTAGTGTCGTGTTCAAGTGTCTTCAAGGGATAGACCCAGTGCCAGCTTGGCCATCTTCCTC
AAGGGAAGCTAATTTTGCATTTTAAGAACCCCCCTCCCCAACCCCGCGGAAATTTCTGCTACAG
TGTTACAGCGGCATCAGTGTGTGTGCTCATTTTATATTGACTTATTTTCAGTATGCAAGCCTTC
AGAGTGGTCTCTATTATAAACCTCTTATTTCCTATTTTTTTTTTCTTTTTGGTAGTACTGAGAT
TGTACCCAGGGTCTTGAACATGCCAGGCAAGTGCTTGGCCGTGGGACTACATCTTCCCCGGTCA
TCTTTTTAAGCATGCATGTTTTTAAAGCATCTTGTGCTGTGCTGTGTGTAACCAAGGCACAGGA
GAGGAGTGGTGACCGTCCCTCCTTGCCTCACTGGCAGACAGGCCTTGAAAAACAGGCCTTGATA
AATGTCCCCATGTGCAGAGGGCATAAACTAGCCCTCTAAGCAATGTTTGCCAGTGGCCTCTTAG
TCACCCCCATCACCAGGAAATGTCACAGCTTCTAGCTTCTGGAGATTCTCCAACAGGAATAAGA
ATGTAGCCCGCGCAGCTGGCAAATTAAGAAGATATACTAGTCTATTTATTTTCTTTTAATTAAA
TAAGCCCTAAAAAGCTTTTTAGCACTCTGGAGAGTAAAAATATAAAGTTTTCTTCACCACATGC
TGGGGGCCAAATGCTTTTTTTGTTAAGTGATTAAAAGGGGGTTGGGGTGGGGGACCAGGCCTGG
TGGCACATGCAGATAATCCTAAGTAAATCCCAGCACCCTGGAGGCAGGCAGGGACCAGAAGTTC
AGGCTTTGACTGGGCTATACTGTGAGGCCCTTGTCTTCTCGAGAGCTGGAGCTGTGACTCAGTG
GTAGTGTTGCCAATCCCCGGCACTGTAAAAATAAATAACAAAAGATTTAAAATACAAGAGAAAT
GCTCCGAGTGGCTTAGGAATATTAGGTGATCTTGTTGACACTCTCAGCATAGAACTGTTCCTTC
AGTTCCGCACTGCCAAAGTCCAGACGACTCTTGCCTGTCAGTCAGTACCACAGACGGACGGGTT
TACTGTGTGCTGGAAGGCGGCGCTTACTCTGTTTGGAGACCGGGAGTCCCCCCAGACTTGGTAT
TCTCTGAAGCTCTAGTGCGGACTCAAGCGTCTTCAGAAACAGACCAAACTAACAAGTGCGGAAC
GGAGCACGCGGTTGGGAGGCCGGGAGCGAGCGCGTAGGATGAAATCCCTGACTTCAGGGTTAGA
GCTTAAGCTAAACTTTGTTTCCAACCCTGTTCTCCCTGCAGACTTGGCACTGCCTGCGCACACA
TGTCTGCACACTCGCTCGGCAGCCTGGGTTGAGCCTGGCCGGCCGAAGTCCTCGCTTTCAGCAA
AGATCGCACAGGCTAGAAAGGGCACTCGGCGGCCCACGGGCTTTCAGGATCTGTGGCCTAAGCT
CAAGGCATACTGAATTGAAGGTGGTGTGGACCTTCTGAAGCCCCTCCCGAATTCCCTGAGGCTC
ATTTCAGCTGGTGATCTCACGCCTCAGCTGCCCCTGCTGTCTCTGTGGGACTGTGGCCCTCTAA
GCTCGCTCTCAGGTTTTTTGTTTTTTTAAATCTTCTTGGGAAGAGAGAATATAGATGTTGAAAG
AGTACAAAATAGATTTAGGCAAGGAGTTTAGAGATGTCTATATTATGAAGCATTTTAAGGGTAA
CAGATTATTATTTACTTACCAATGAACAGGTAAGGTCTGGGGATCCCAGACCGCCAAGCCAAAG
GTGGAAGAAATCGCCTTTCAAAAAGTTTTAACAATGAAGTTATTTCAAAGGAGACTAATGTCCA
AGAAAGGTTTGACTGGCCTCCAGATTCCGATTATTTTTTAAAAAGCAATTTACCAGGGCTGGGG
ATGTAGTTCAGTTGGTGACACACTTGCTCAGCACAAGTCCCTGAATGTCATTCCCCAGTGCTGG
GGGAAAATCAGAAAAAAAGAAATATTTACTACTAAGTCCTTCCTGATATGGAGAGAAAAGGGAG
ACGCGTGTAGAACCAGGTCTTCTCCATAGGCGTTTCTAGAACAGTTCAGGCGAGCACTTGGCCC
CTCGGAGAGCGAAGCTCGCACTTCTAGTCCTTCCCACCCAGATGCAGCGCCCCCTGTCTGTGCC
TCTCAGCATGCAGTTAGATTTGGACAAATAAGATTCCCGAGGAATGACTTTCTCCATGACACCA
CGGTTTCAGCTTTATGTAAACACACACACATCCCCTTATAGTTCTAGTCTGGAGATGCTGCTGC
CATGCTGGCCTCAGGTAGACTGTGTGATGTTTTTACCACTCAGAGGAGGCCAAGCGTGGGGCTG
AGGTGTGGCCTGAACCTTCCCTGTATGGAGTCTTCAATACCAACTCTCAGGATGCCACGCTACC
CCCTGCCTTCTCGTGGCATCTGAGTACACTCAGCAAAAGCACTTCCCCACATCACGAAAGAAAC
TGATTCGGTATTTGTGAATCACTTTGCAAATGGACACACAGAAATCTGAGCTCTGAAACTCCAT
CCAGACCAGATACAGGGCAGTGTGAAGATCACACCCTCAGCCTCAGTGCTGTCCCTCAAAGTCC
TTGGGAGAGGACTCAGACACTCGGATGAGTCTCCAAGGCACCTGTCAACTTTCTAGTATTGCCG
TTAGCGAGTCTGTGTTTGCCAATAGATACCCACTGTACTAACGTGCCAAGTGTTTATTTGCACA
TCTGCTTCCACTGTGTCCAGCACCCACCCCCCAACCCCACCTCNTGGTGCCCCGGAGTGGCAGG
GGGGCACACACTGCATTGACTCCTGCTGTCAGGACGGTGTTGTGCAGAATAATCATCCTCATAG
ATTTTATACACATAGTAATTCCCCTTTTTATATGTCAGGTAAATATTTGTAAAAGTTATACTCA
CACAAAAGAAATTATTATGATAATTACTAATATATTTTTTCCATGTTTCATTGCCTGAATAAAA
ACTGTTTACCACTGTT

hide sequence

RefSeq Acc Id:

XM_006253318 ⟹ XP_006253380

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,543,160 - 73,598,395 (+)	NCBI
mRatBN7.2	16	66,840,914 - 66,895,736 (+)	NCBI
Rnor_6.0	16	71,629,749 - 71,681,126 (+)	NCBI
Rnor_5.0	16	71,252,762 - 71,335,563 (+)	NCBI

Sequence:

show sequence

AGGGGCGGTAGCCGCGCTCATGGCGTTCAGTCCCTGGCAGATCCTGTCGCCCGTGCAGTGGGCC
AAGTGGACGTGGTCCGCGGTGCGCGGTTCGGGCGCGGGAGAGGACGAAGCTGGAGGTCCCGAAG
GCGACCCCGAGGAGGAAGAGGACTCGCAAGCCGAGACCAAATCCCTGAGTTTCAGGAGTGGCTG
CAAGGTGAAGAAATACGAAACTCAGTCTCTTGATTTGGACGCTTGTTCTCAGGATGAAGGAGCC
GTGATCTCACAGATTGCAGACATTCCTAATCGGGACGGGCACGCCACCGATGAGGAGAAGCTGG
CGTCCACGTCGTGTAGTCAGAAGTCAGCCGGGGCTGAAGTGAAAGGCGTAGAAAAGGAGGCATA
CCAGAAGATGGAGGAGGAGGAGCTGACTGTGCATGGACTGCTGGAGACCTCTTCAGAAAAGGCC
CCCGTGTCTGTGGCCTGTGGAGGTGAGAGCCCTCTGGATGGGATCTGCCTCAGTGAAGCAGACA
AGACTGCTGTGCTTACATTGATCAGAGAAGAGATCATCACGAAAGAGATTGAAGCAAATGAATG
GAAGAAGAAATACGAAGAGACCCGAGAAGAAGTCCTGGAGATGAGGAAAATTGTGGCAGAATAT
GAAAAGACCATTGCCCAAATGATCGAAGACGAGCAGAGGACAAACATGAGCTCTCAGAAGAGTT
TCCAGCAGCTGACTATGGAGAAGGAGCAGGCTCTGGCTGACCTGAACTCTGTGGAAAGGTCCCT
TTCTGATCTCTTCAGAAGATATGAAAACCTGAAAGGCGTGCTAGAAGGGTTCAAGAAGAATGAA
GAAGCCTTGAAAAAGTGTGCTCAGGATTACTTAGCCAGAGTGAAGCAGGAAGAGCAGCGCTACC
AGGCCCTGAAGGTCCACGCTGAGGAAAAGCTGGACAGAGCCAACGAGGAAATCGCTCAGGTTCG
GTCCAAGGCGAAGGCTGAGAGTGCGGCTCTCCATGCTGGACTCCGGAGGGAGCAGATGAAGGTG
GAGTCCCTGGAGAGGGCCCTTCAGCAGAAGAATCAAGAGATTGAAGAACTGACAAAAATCTGTG
ACGAGTTGATCGCAAAGCTTGGAAAGGCCGACTGAGAGTCGTCCCGTGAGCTGTGCAGATCCGA
GTCTGGCTGCTTCTGTCGTGACCACATTATCTTGCCTTATCCAGAAATATCTCCCCCCTTTGCA
GAGAAAAATAACTGTTTCAAAAGCACATGCCTGCTGCTGCCCGCCTGTCCGTCCCGCTTCGCCG
CGCGCAGCTGTGGCCAGGCTGGTGGAGATGGAGTCACGTGACCGCAGAGCCCCGCGACCAGGCT
GCCAGCTTCCCTTAGGCACGCTGCTGCTGGGTCCGGCTTATGCTTCTCCAACTTGAGTTCATCT
CGCTGTCGTCCTTGCTTTTCCCAAGTTTGTGACATTTCTAATTTTGTGGCAACTGTGTGGGTTT
ATCTTCCCAGCTCCTGATATTTCTATGGCCTAGTTAACCTTTAAAATTTTCAGGATCGTCAGTT
TTATCGAAGCGGGGGACGGTCTGGCCCATCATTACGAACACTTTGTCTAGGAGGCTCCAAGCTC
CCTTTTATTTACAGACTGTACATTCTGCTGCTCCCCACCCCACCCCCTCGATGCAGATAAGAGC
CTCTAGGGAGGAGTTTGGCTACATAAATAAATATAGACTCTTATTTTGAAACAGAGCCGTAGGT
CTAAAAGCCAGCTTCAGACTTCACAGGGGCTGGGAATGTAGCTCCGTTAGTAGACAGCTTCCTG
TACACAGAGCCCTGGGTTTGGCCCCCAGAATGTTGGAGGGCGTGCCTGTAACCCAACCCTCCAG
AGGTGGAGACAGGCTGATGAGAAATTTGAGGTCATCCTCAACTACATAGCCACTCGGAGGCCAG
CCTGGACTAACTACATGGGGCCTTGCTTTACACAAGGAGTGAGTGGAAGCATGGGGTATCCTAG
CTAGTGGGAGATGGGACAGGACGATCACTTGAGCCCAGAATTTAAGGACAGCAGTGCACCAGGC
AAATAGTCCTTTTCTCAAAAATCCTACTAAACCTTGAGTCAGGGTGGAGAGGTTGAGCGTGTGA
AGGCCAGGGGACATAGGTTTCACGTCTAGGGAAGATTTGCTGTGCCGTCTCTTGCCCCGGTATT
TGGACACCTCAGAAGCTCAGCGTGGCCCCACGCGCTCATGCTGAAAGCAGCATCACGTGACCAG
CAGCATAAACCTCCCTCAGAGTTGGCCTAGGCTGCATGTGTCCACTTGGGGCCGGTTAGTCTCC
GAAACAAAGTCAACTTTTGTCATCTATTTGAAACACACACAAATGGGACTTGGGAAAGGTTTAG
TTGATCTTGTTAAAAGATGGTGGACGCTTACAAACCAGTTAGAGTGAAGATCCTTAATCTTCTA
TGTTTACTAGCAGACAGCACCCTTTTAGAGACTTAAAAACAACAGCCACAACAAATTCTTCCTT
CCTTACTCAAGCTGGGTTTTAAAACAAAACAGGCAGTAAAGAGTCCAGTAGCTCCCCTGGGCAT
ATTTTAAGCAAAGACTGCTTGAATGCTGGGGAGGGGAATAGGGAGAAGTTCCACATAGACAAAA
CAAAAGTCTGTGAACTCATACTGGACTTACACTGGGGGACATTAACCCCCAAATAAGAATACCC
CACATTGGCACTGGTGACTTCCTTTCCATGATAGGCAAAGCCAAACCCATTTAGGTTTTATTGC
TTTTATTTTGCCTTAATCTTAACACCCTGAGTCTTCATAGTAAGTGTACACTATTTAGTACACA
TATATTTTCCTCCTTGTAACACCGTTGCATGAGCCAAGTCCAGCAATGAATTGTGCCTCGTAGA
GAGCCTCCATAGATCTTATAAACAGTGTCCTTAGCAGCGCGTTACCATGTGGTGTAACCTTTAG
CCCCAGGGAAGCAATGTCTTTTCAAGCTAGAAATCACATCTTGTCAATATGCATTTATTATAAC
AGGTGCTTAAGTTAGGCTGTATCCTGAGGCCTACTGTCTTTTAACCTTTTGTACAAAAAAACAC
AAGCAGACAGAAGTTATCTGTGGTTGGAGAAATGGCTTGACAATCATTTGGGCTCTGAATTTAG
TCACAGTGGCTTAACGTGAAGCCCATAGCAGTACATGTAGTGTCGTGTTCAAGTGTCTTCAAGG
GATAGACCCAGTGCCAGCTTGGCCATCTTCCTCAAGGGAAGCTAATTTTGCATTTTAAGAACCC
CCCTCCCCAACCCCGCGGAAATTTCTGCTACAGTGTTACAGCGGCATCAGTGTGTGTGCTCATT
TTATATTGACTTATTTTCAGTATGCAAGCCTTCAGAGTGGTCTCTATTATAAACCTCTTATTTC
CTATTTTTTTTTTCTTTTTGGTAGTACTGAGATTGTACCCAGGGTCTTGAACATGCCAGGCAAG
TGCTTGGCCGTGGGACTACATCTTCCCCGGTCATCTTTTTAAGCATGCATGTTTTTAAAGCATC
TTGTGCTGTGCTGTGTGTAACCAAGGCACAGGAGAGGAGTGGTGACCGTCCCTCCTTGCCTCAC
TGGCAGACAGGCCTTGAAAAACAGGCCTTGATAAATGTCCCCATGTGCAGAGGGCATAAACTAG
CCCTCTAAGCAATGTTTGCCAGTGGCCTCTTAGTCACCCCCATCACCAGGAAATGTCACAGCTT
CTAGCTTCTGGAGATTCTCCAACAGGAATAAGAATGTAGCCCGCGCAGCTGGCAAATTAAGAAG
ATATACTAGTCTATTTATTTTCTTTTAATTAAATAAGCCCTAAAAAGCTTTTTAGCACTCTGGA
GAGTAAAAATATAAAGTTTTCTTCACCACATGCTGGGGGCCAAATGCTTTTTTTGTTAAGTGAT
TAAAAGGGGGTTGGGGTGGGGGACCAGGCCTGGTGGCACATGCAGATAATCCTAAGTAAATCCC
AGCACCCTGGAGGCAGGCAGGGACCAGAAGTTCAGGCTTTGACTGGGCTATACTGTGAGGCCCT
TGTCTTCTCGAGAGCTGGAGCTGTGACTCAGTGGTAGTGTTGCCAATCCCCGGCACTGTAAAAA
TAAATAACAAAAGATTTAAAATACAAGAGAAATGCTCCGAGTGGCTTAGGAATATTAGGTGATC
TTGTTGACACTCTCAGCATAGAACTGTTCCTTCAGTTCCGCACTGCCAAAGTCCAGACGACTCT
TGCCTGTCAGTCAGTACCACAGACGGACGGGTTTACTGTGTGCTGGAAGGCGGCGCTTACTCTG
TTTGGAGACCGGGAGTCCCCCCAGACTTGGTATTCTCTGAAGCTCTAGTGCGGACTCAAGCGTC
TTCAGAAACAGACCAAACTAACAAGTGCGGAACGGAGCACGCGGTTGGGAGGCCGGGAGCGAGC
GCGTAGGATGAAATCCCTGACTTCAGGGTTAGAGCTTAAGCTAAACTTTGTTTCCAACCCTGTT
CTCCCTGCAGACTTGGCACTGCCTGCGCACACATGTCTGCACACTCGCTCGGCAGCCTGGGTTG
AGCCTGGCCGGCCGAAGTCCTCGCTTTCAGCAAAGATCGCACAGGCTAGAAAGGGCACTCGGCG
GCCCACGGGCTTTCAGGATCTGTGGCCTAAGCTCAAGGCATACTGAATTGAAGGTGGTGTGGAC
CTTCTGAAGCCCCTCCCGAATTCCCTGAGGCTCATTTCAGCTGGTGATCTCACGCCTCAGCTGC
CCCTGCTGTCTCTGTGGGACTGTGGCCCTCTAAGCTCGCTCTCAGGTTTTTTGTTTTTTTAAAT
CTTCTTGGGAAGAGAGAATATAGATGTTGAAAGAGTACAAAATAGATTTAGGCAAGGAGTTTAG
AGATGTCTATATTATGAAGCATTTTAAGGGTAACAGATTATTATTTACTTACCAATGAACAGGT
AAGGTCTGGGGATCCCAGACCGCCAAGCCAAAGGTGGAAGAAATCGCCTTTCAAAAAGTTTTAA
CAATGAAGTTATTTCAAAGGAGACTAATGTCCAAGAAAGGTTTGACTGGCCTCCAGATTCCGAT
TATTTTTTAAAAAGCAATTTACCAGGGCTGGGGATGTAGTTCAGTTGGTGACACACTTGCTCAG
CACAAGTCCCTGAATGTCATTCCCCAGTGCTGGGGGAAAATCAGAAAAAAAGAAATATTTACTA
CTAAGTCCTTCCTGATATGGAGAGAAAAGGGAGACGCGTGTAGAACCAGGTCTTCTCCATAGGC
GTTTCTAGAACAGTTCAGGCGAGCACTTGGCCCCTCGGAGAGCGAAGCTCGCACTTCTAGTCCT
TCCCACCCAGATGCAGCGCCCCCTGTCTGTGCCTCTCAGCATGCAGTTAGATTTGGACAAATAA
GATTCCCGAGGAATGACTTTCTCCATGACACCACGGTTTCAGCTTTATGTAAACACACACACAT
CCCCTTATAGTTCTAGTCTGGAGATGCTGCTGCCATGCTGGCCTCAGGTAGACTGTGTGATGTT
TTTACCACTCAGAGGAGGCCAAGCGTGGGGCTGAGGTGTGGCCTGAACCTTCCCTGTATGGAGT
CTTCAATACCAACTCTCAGGATGCCACGCTACCCCCTGCCTTCTCGTGGCATCTGAGTACACTC
AGCAAAAGCACTTCCCCACATCACGAAAGAAACTGATTCGGTATTTGTGAATCACTTTGCAAAT
GGACACACAGAAATCTGAGCTCTGAAACTCCATCCAGACCAGATACAGGGCAGTGTGAAGATCA
CACCCTCAGCCTCAGTGCTGTCCCTCAAAGTCCTTGGGAGAGGACTCAGACACTCGGATGAGTC
TCCAAGGCACCTGTCAACTTTCTAGTATTGCCGTTAGCGAGTCTGTGTTTGCCAATAGATACCC
ACTGTACTAACGTGCCAAGTGTTTATTTGCACATCTGCTTCCACTGTGTCCAGCACCCACCCCC
CAACCCCACCTCNTGGTGCCCCGGAGTGGCAGGGGGGCACACACTGCATTGACTCCTGCTGTCA
GGACGGTGTTGTGCAGAATAATCATCCTCATAGATTTTATACACATAGTAATTCCCCTTTTTAT
ATGTCAGGTAAATATTTGTAAAAGTTATACTCACACAAAAGAAATTATTATGATAATTACTAAT
ATATTTTTTCCATGTTTCATTGCCTGAATAAAAACTGTTTACCACTGTT

hide sequence

RefSeq Acc Id:

XM_017600145 ⟹ XP_017455634

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,543,160 - 73,598,395 (+)	NCBI
mRatBN7.2	16	66,840,885 - 66,895,736 (+)	NCBI
Rnor_6.0	16	71,629,749 - 71,681,126 (+)	NCBI

Sequence:

show sequence

AGGGGCGGTAGCCGCGCTCATGGCGTTCAGTCCCTGGCAGATCCTGTCGCCCGTGCAGTGGGCC
AAGTGGACGTGGTCCGCGGTGCGCGGTTCGGGCGCGGGAGAGGACGAAGCTGGAGGTCCCGAAG
GCGACCCCGAGGAGGAAGAGGACTCGCAAGCCGAGACCAAATCCCTGAGTTTCAGCTCGGATTC
TGAAGGTAATTTTGAGACTCCTGAAGCTGAAACTCCAATCAGATCGTCTCTCAAGGAGTCTTGT
GATTCATCACTAGGATTGTCAGAACCCGAGGCCAAACCCCAAGAATCACGAGAAGCCGATGAAC
AGCCGGTAGCAGAATTAATTGAAAAATGCTCGCCTGATGCGTGTTCTAGATCTTCAGGAAATGA
AGCGCCACAGGCCACTATCGATTCTTACTCAGTCAAGGATGTCAGAGGGAAGGCGGAACATGAT
GTTAGCAAGATCTCAGTAGTGAGGCCGTTTTCCATAGAAACCAGGGACTGCACAGATGACCCTG
CTGCTCATGGCTGTGTCCCTGTGCTCCCAGGCAAGGCCTTGCCTTCCACCACACCCGAAGCCAC
TCAGGACCAGCCAATGATGGACAGAGGCATGGGGGTTACATTGGAGGCTTTTACAGAAGTCAAT
CTGAAGACTGGAGGCCCCTGCCCAGAGCCTGTGCCCAGCAGAAGCAGGCTAAGAAAGCCCAAGC
CTGTCTCCCTGAGGAAGAAGACAGCTGGGGACAACACCTTTGAACCCGAAATGTTGATGGAGGG
TTCACTTCTCCCTAAGGCTTCCTCCCCGTGGATTCCTGAGGAGTCTGATAAGAACTCGAATCCT
AGTTTGCTGAGAGGCTTGAGGGCCCACAAATCTCCCCTTAACCTTAAAGAAGCTGCTAGCATTC
ACTGTAACAGCGCCGGTGACTCGGGGGTTGATCTGCAGGAGGGGTCCAGGGCCTCACCTCTCAA
ACTTGATGATTTTACAGAAGACGGGCGGAGTGTCGAGACCAGGAGTGCCCTTCCGAAGCAGCCT
GGCAGGAAACCCAGCCACAAACTGGCACCCAATATACGAAAAGATGGCTCCAGTAAGCCAGTAG
GTGTTGAGCAGCTCACAGACCCAACCATTGAAGATGCCTCCCTCGCCCAGACGTCTCCCAAGTT
AGACCCAAGTAAATGGGGTCGTCCTAACTTTAATTCCTTCGGGAGCTGCCCCATTTTGCAGAGC
TCCCCGCCCGTCTCCTCCAAAGGTTCCTACCACCTTGACCCAGATAACGTTAACGCCGATGAAT
CCGGGGACCCCTGTAAGCCGGCGACAGCTTTGACAGGCAGCGGCTTTTGCTCTGCCACTGGTAA
TCATGTTAATGAAATCTTAGACTCACCCAAGAAGGCACAGTCGCGTTTAATAACGACCTCTGAG
CAAGTGAAATTTCTCTGTTTTCTGTTGAGTGGCTGCAAGGTGAAGAAATACGAAACTCAGTCTC
TTGATTTGGACGCTTGTTCTCAGGATGAAGGAGCCGTGATCTCACAGATTGCAGACATTCCTAA
TCGGGACGGGCACGCCACCGATGAGGAGAAGCTGGCGTCCACGTCGTGTAGTCAGAAGTCAGCC
GGGGCTGAAGTGAAAGGCGTAGAAAAGGAGGCATACCAGAAGATGGAGGAGGAGGAGCTGACTG
TGCATGGACTGCTGGAGACCTCTTCAGAAAAGGCCCCCGTGTCTGTGGCCTGTGGAGGTGAGAG
CCCTCTGGATGGGATCTGCCTCAGTGAAGCAGACAAGACTGCTGTGCTTACATTGATCAGAGAA
GAGATCATCACGAAAGAGATTGAAGCAAATGAATGGAAGAAGAAATACGAAGAGACCCGAGAAG
AAGTCCTGGAGATGAGGAAAATTGTGGCAGAATATGAAAAGACCATTGCCCAAATGATCGAAGA
CGAGCAGAGGACAAACATGAGCTCTCAGAAGAGTTTCCAGCAGCTGACTATGGAGAAGGAGCAG
GCTCTGGCTGACCTGAACTCTGTGGAAAGGTCCCTTTCTGATCTCTTCAGAAGATATGAAAACC
TGAAAGGCGTGCTAGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAAAAGTGTGCTCAGGATTA
CTTAGCCAGAGTGAAGCAGGAAGAGCAGCGCTACCAGGCCCTGAAGGTCCACGCTGAGGAAAAG
CTGGACAGAGCCAACGAGGAAATCGCTCAGGTTCGGTCCAAGGCGAAGGCTGAGAGTGCGGCTC
TCCATGCTGGACTCCGGAGGGAGCAGATGAAGGTGGAGTCCCTGGAGAGGGCCCTTCAGCAGAA
GAATCAAGAGATTGAAGAACTGACAAAAATCTGTGACGAGTTGATCGCAAAGCTTGGAAAGGCC
GACTGAGAGTCGTCCCGTGAGCTGTGCAGATCCGAGTCTGGCTGCTTCTGTCGTGACCACATTA
TCTTGCCTTATCCAGAAATATCTCCCCCCTTTGCAGAGAAAAATAACTGTTTCAAAAGCACATG
CCTGCTGCTGCCCGCCTGTCCGTCCCGCTTCGCCGCGCGCAGCTGTGGCCAGGCTGGTGGAGAT
GGAGTCACGTGACCGCAGAGCCCCGCGACCAGGCTGCCAGCTTCCCTTAGGCACGCTGCTGCTG
GGTCCGGCTTATGCTTCTCCAACTTGAGTTCATCTCGCTGTCGTCCTTGCTTTTCCCAAGTTTG
TGACATTTCTAATTTTGTGGCAACTGTGTGGGTTTATCTTCCCAGCTCCTGATATTTCTATGGC
CTAGTTAACCTTTAAAATTTTCAGGATCGTCAGTTTTATCGAAGCGGGGGACGGTCTGGCCCAT
CATTACGAACACTTTGTCTAGGAGGCTCCAAGCTCCCTTTTATTTACAGACTGTACATTCTGCT
GCTCCCCACCCCACCCCCTCGATGCAGATAAGAGCCTCTAGGGAGGAGTTTGGCTACATAAATA
AATATAGACTCTTATTTTGAAACAGAGCCGTAGGTCTAAAAGCCAGCTTCAGACTTCACAGGGG
CTGGGAATGTAGCTCCGTTAGTAGACAGCTTCCTGTACACAGAGCCCTGGGTTTGGCCCCCAGA
ATGTTGGAGGGCGTGCCTGTAACCCAACCCTCCAGAGGTGGAGACAGGCTGATGAGAAATTTGA
GGTCATCCTCAACTACATAGCCACTCGGAGGCCAGCCTGGACTAACTACATGGGGCCTTGCTTT
ACACAAGGAGTGAGTGGAAGCATGGGGTATCCTAGCTAGTGGGAGATGGGACAGGACGATCACT
TGAGCCCAGAATTTAAGGACAGCAGTGCACCAGGCAAATAGTCCTTTTCTCAAAAATCCTACTA
AACCTTGAGTCAGGGTGGAGAGGTTGAGCGTGTGAAGGCCAGGGGACATAGGTTTCACGTCTAG
GGAAGATTTGCTGTGCCGTCTCTTGCCCCGGTATTTGGACACCTCAGAAGCTCAGCGTGGCCCC
ACGCGCTCATGCTGAAAGCAGCATCACGTGACCAGCAGCATAAACCTCCCTCAGAGTTGGCCTA
GGCTGCATGTGTCCACTTGGGGCCGGTTAGTCTCCGAAACAAAGTCAACTTTTGTCATCTATTT
GAAACACACACAAATGGGACTTGGGAAAGGTTTAGTTGATCTTGTTAAAAGATGGTGGACGCTT
ACAAACCAGTTAGAGTGAAGATCCTTAATCTTCTATGTTTACTAGCAGACAGCACCCTTTTAGA
GACTTAAAAACAACAGCCACAACAAATTCTTCCTTCCTTACTCAAGCTGGGTTTTAAAACAAAA
CAGGCAGTAAAGAGTCCAGTAGCTCCCCTGGGCATATTTTAAGCAAAGACTGCTTGAATGCTGG
GGAGGGGAATAGGGAGAAGTTCCACATAGACAAAACAAAAGTCTGTGAACTCATACTGGACTTA
CACTGGGGGACATTAACCCCCAAATAAGAATACCCCACATTGGCACTGGTGACTTCCTTTCCAT
GATAGGCAAAGCCAAACCCATTTAGGTTTTATTGCTTTTATTTTGCCTTAATCTTAACACCCTG
AGTCTTCATAGTAAGTGTACACTATTTAGTACACATATATTTTCCTCCTTGTAACACCGTTGCA
TGAGCCAAGTCCAGCAATGAATTGTGCCTCGTAGAGAGCCTCCATAGATCTTATAAACAGTGTC
CTTAGCAGCGCGTTACCATGTGGTGTAACCTTTAGCCCCAGGGAAGCAATGTCTTTTCAAGCTA
GAAATCACATCTTGTCAATATGCATTTATTATAACAGGTGCTTAAGTTAGGCTGTATCCTGAGG
CCTACTGTCTTTTAACCTTTTGTACAAAAAAACACAAGCAGACAGAAGTTATCTGTGGTTGGAG
AAATGGCTTGACAATCATTTGGGCTCTGAATTTAGTCACAGTGGCTTAACGTGAAGCCCATAGC
AGTACATGTAGTGTCGTGTTCAAGTGTCTTCAAGGGATAGACCCAGTGCCAGCTTGGCCATCTT
CCTCAAGGGAAGCTAATTTTGCATTTTAAGAACCCCCCTCCCCAACCCCGCGGAAATTTCTGCT
ACAGTGTTACAGCGGCATCAGTGTGTGTGCTCATTTTATATTGACTTATTTTCAGTATGCAAGC
CTTCAGAGTGGTCTCTATTATAAACCTCTTATTTCCTATTTTTTTTTTCTTTTTGGTAGTACTG
AGATTGTACCCAGGGTCTTGAACATGCCAGGCAAGTGCTTGGCCGTGGGACTACATCTTCCCCG
GTCATCTTTTTAAGCATGCATGTTTTTAAAGCATCTTGTGCTGTGCTGTGTGTAACCAAGGCAC
AGGAGAGGAGTGGTGACCGTCCCTCCTTGCCTCACTGGCAGACAGGCCTTGAAAAACAGGCCTT
GATAAATGTCCCCATGTGCAGAGGGCATAAACTAGCCCTCTAAGCAATGTTTGCCAGTGGCCTC
TTAGTCACCCCCATCACCAGGAAATGTCACAGCTTCTAGCTTCTGGAGATTCTCCAACAGGAAT
AAGAATGTAGCCCGCGCAGCTGGCAAATTAAGAAGATATACTAGTCTATTTATTTTCTTTTAAT
TAAATAAGCCCTAAAAAGCTTTTTAGCACTCTGGAGAGTAAAAATATAAAGTTTTCTTCACCAC
ATGCTGGGGGCCAAATGCTTTTTTTGTTAAGTGATTAAAAGGGGGTTGGGGTGGGGGACCAGGC
CTGGTGGCACATGCAGATAATCCTAAGTAAATCCCAGCACCCTGGAGGCAGGCAGGGACCAGAA
GTTCAGGCTTTGACTGGGCTATACTGTGAGGCCCTTGTCTTCTCGAGAGCTGGAGCTGTGACTC
AGTGGTAGTGTTGCCAATCCCCGGCACTGTAAAAATAAATAACAAAAGATTTAAAATACAAGAG
AAATGCTCCGAGTGGCTTAGGAATATTAGGTGATCTTGTTGACACTCTCAGCATAGAACTGTTC
CTTCAGTTCCGCACTGCCAAAGTCCAGACGACTCTTGCCTGTCAGTCAGTACCACAGACGGACG
GGTTTACTGTGTGCTGGAAGGCGGCGCTTACTCTGTTTGGAGACCGGGAGTCCCCCCAGACTTG
GTATTCTCTGAAGCTCTAGTGCGGACTCAAGCGTCTTCAGAAACAGACCAAACTAACAAGTGCG
GAACGGAGCACGCGGTTGGGAGGCCGGGAGCGAGCGCGTAGGATGAAATCCCTGACTTCAGGGT
TAGAGCTTAAGCTAAACTTTGTTTCCAACCCTGTTCTCCCTGCAGACTTGGCACTGCCTGCGCA
CACATGTCTGCACACTCGCTCGGCAGCCTGGGTTGAGCCTGGCCGGCCGAAGTCCTCGCTTTCA
GCAAAGATCGCACAGGCTAGAAAGGGCACTCGGCGGCCCACGGGCTTTCAGGATCTGTGGCCTA
AGCTCAAGGCATACTGAATTGAAGGTGGTGTGGACCTTCTGAAGCCCCTCCCGAATTCCCTGAG
GCTCATTTCAGCTGGTGATCTCACGCCTCAGCTGCCCCTGCTGTCTCTGTGGGACTGTGGCCCT
CTAAGCTCGCTCTCAGGTTTTTTGTTTTTTTAAATCTTCTTGGGAAGAGAGAATATAGATGTTG
AAAGAGTACAAAATAGATTTAGGCAAGGAGTTTAGAGATGTCTATATTATGAAGCATTTTAAGG
GTAACAGATTATTATTTACTTACCAATGAACAGGTAAGGTCTGGGGATCCCAGACCGCCAAGCC
AAAGGTGGAAGAAATCGCCTTTCAAAAAGTTTTAACAATGAAGTTATTTCAAAGGAGACTAATG
TCCAAGAAAGGTTTGACTGGCCTCCAGATTCCGATTATTTTTTAAAAAGCAATTTACCAGGGCT
GGGGATGTAGTTCAGTTGGTGACACACTTGCTCAGCACAAGTCCCTGAATGTCATTCCCCAGTG
CTGGGGGAAAATCAGAAAAAAAGAAATATTTACTACTAAGTCCTTCCTGATATGGAGAGAAAAG
GGAGACGCGTGTAGAACCAGGTCTTCTCCATAGGCGTTTCTAGAACAGTTCAGGCGAGCACTTG
GCCCCTCGGAGAGCGAAGCTCGCACTTCTAGTCCTTCCCACCCAGATGCAGCGCCCCCTGTCTG
TGCCTCTCAGCATGCAGTTAGATTTGGACAAATAAGATTCCCGAGGAATGACTTTCTCCATGAC
ACCACGGTTTCAGCTTTATGTAAACACACACACATCCCCTTATAGTTCTAGTCTGGAGATGCTG
CTGCCATGCTGGCCTCAGGTAGACTGTGTGATGTTTTTACCACTCAGAGGAGGCCAAGCGTGGG
GCTGAGGTGTGGCCTGAACCTTCCCTGTATGGAGTCTTCAATACCAACTCTCAGGATGCCACGC
TACCCCCTGCCTTCTCGTGGCATCTGAGTACACTCAGCAAAAGCACTTCCCCACATCACGAAAG
AAACTGATTCGGTATTTGTGAATCACTTTGCAAATGGACACACAGAAATCTGAGCTCTGAAACT
CCATCCAGACCAGATACAGGGCAGTGTGAAGATCACACCCTCAGCCTCAGTGCTGTCCCTCAAA
GTCCTTGGGAGAGGACTCAGACACTCGGATGAGTCTCCAAGGCACCTGTCAACTTTCTAGTATT
GCCGTTAGCGAGTCTGTGTTTGCCAATAGATACCCACTGTACTAACGTGCCAAGTGTTTATTTG
CACATCTGCTTCCACTGTGTCCAGCACCCACCCCCCAACCCCACCTCNTGGTGCCCCGGAGTGG
CAGGGGGGCACACACTGCATTGACTCCTGCTGTCAGGACGGTGTTGTGCAGAATAATCATCCTC
ATAGATTTTATACACATAGTAATTCCCCTTTTTATATGTCAGGTAAATATTTGTAAAAGTTATA
CTCACACAAAAGAAATTATTATGATAATTACTAATATATTTTTTCCATGTTTCATTGCCTGAAT
AAAAACTGTTTACCACTGTT

hide sequence

RefSeq Acc Id:

XM_017600146 ⟹ XP_017455635

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,515,040 - 73,598,395 (+)	NCBI
mRatBN7.2	16	66,812,376 - 66,895,736 (+)	NCBI
Rnor_6.0	16	71,596,970 - 71,681,126 (+)	NCBI

Sequence:

show sequence

CCCGCCGCCTCCTGCGAGGTCACTCGTGGGCTGGCTGTGATGGGCGGCTCGCACTCCCAGGGTC
GCGGCCCGGGGCTCGCGTGGGAGACGCCCCCGACAGCCGTGGATGCCGCCTCGGATTCTGAAGG
TAATTTTGAGACTCCTGAAGCTGAAACTCCAATCAGATCGTCTCTCAAGGAGTCTTGTGATTCA
TCACTAGGATTGTCAGAACCCGAGGCCAAACCCCAAGAATCACGAGAAGCCGATGAACAGCCGG
TAGCAGAATTAATTGAAAAATGCTCGCCTGATGCGTGTTCTAGATCTTCAGGAAATGAAGCGCC
ACAGGCCACTATCGATTCTTACTCAGTCAAGGATGTCAGAGGGAAGGCGGAACATGATGTTAGC
AAGATCTCAGTAGTGAGGCCGTTTTCCATAGAAACCAGGGACTGCACAGATGACCCTGCTGCTC
ATGGCTGTGTCCCTGTGCTCCCAGGCAAGGCCTTGCCTTCCACCACACCCGAAGCCACTCAGGA
CCAGCCAATGATGGACAGAGGCATGGGGGTTACATTGGAGGCTTTTACAGAAGTCAATCTGAAG
ACTGGAGGCCCCTGCCCAGAGCCTGTGCCCAGCAGAAGCAGGCTAAGAAAGCCCAAGCCTGTCT
CCCTGAGGAAGAAGACAGCTGGGGACAACACCTTTGAACCCGAAATGTTGATGGAGGGTTCACT
TCTCCCTAAGGCTTCCTCCCCGTGGATTCCTGAGGAGTCTGATAAGAACTCGAATCCTAGTTTG
CTGAGAGGCTTGAGGGCCCACAAATCTCCCCTTAACCTTAAAGAAGCTGCTAGCATTCACTGTA
ACAGCGCCGGTGACTCGGGGGTTGATCTGCAGGAGGGGTCCAGGGCCTCACCTCTCAAACTTGA
TGATTTTACAGAAGACGGGCGGAGTGTCGAGACCAGGAGTGCCCTTCCGAAGCAGCCTGGCAGG
AAACCCAGCCACAAACTGGCACCCAATATACGAAAAGATGGCTCCAGTAAGCCAGTAGGTGTTG
AGCAGCTCACAGACCCAACCATTGAAGATGCCTCCCTCGCCCAGACGTCTCCCAAGTTAGACCC
AAGTAAATGGGGTCGTCCTAACTTTAATTCCTTCGGGAGCTGCCCCATTTTGCAGAGCTCCCCG
CCCGTCTCCTCCAAAGGTTCCTACCACCTTGACCCAGATAACGTTAACGCCGATGAATCCGGGG
ACCCCTGTAAGCCGGCGACAGCTTTGACAGGCAGCGGCTTTTGCTCTGCCACTGGTAATCATGT
TAATGAAATCTTAGACTCACCCAAGAAGGCACAGTCGCGTTTAATAACGACCTCTGAGCAAGTG
AAATTTCTCTGTTTTCTGTTGAGTGGCTGCAAGGTGAAGAAATACGAAACTCAGTCTCTTGATT
TGGACGCTTGTTCTCAGGATGAAGGAGCCGTGATCTCACAGATTGCAGACATTCCTAATCGGGA
CGGGCACGCCACCGATGAGGAGAAGCTGGCGTCCACGTCGTGTAGTCAGAAGTCAGCCGGGGCT
GAAGTGAAAGGCGTAGAAAAGGAGGCATACCAGAAGATGGAGGAGGAGGAGCTGACTGTGCATG
GACTGCTGGAGACCTCTTCAGAAAAGGCCCCCGTGTCTGTGGCCTGTGGAGGTGAGAGCCCTCT
GGATGGGATCTGCCTCAGTGAAGCAGACAAGACTGCTGTGCTTACATTGATCAGAGAAGAGATC
ATCACGAAAGAGATTGAAGCAAATGAATGGAAGAAGAAATACGAAGAGACCCGAGAAGAAGTCC
TGGAGATGAGGAAAATTGTGGCAGAATATGAAAAGACCATTGCCCAAATGATCGAAGACGAGCA
GAGGACAAACATGAGCTCTCAGAAGAGTTTCCAGCAGCTGACTATGGAGAAGGAGCAGGCTCTG
GCTGACCTGAACTCTGTGGAAAGGTCCCTTTCTGATCTCTTCAGAAGATATGAAAACCTGAAAG
GCGTGCTAGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAAAAGTGTGCTCAGGATTACTTAGC
CAGAGTGAAGCAGGAAGAGCAGCGCTACCAGGCCCTGAAGGTCCACGCTGAGGAAAAGCTGGAC
AGAGCCAACGAGGAAATCGCTCAGGTTCGGTCCAAGGCGAAGGCTGAGAGTGCGGCTCTCCATG
CTGGACTCCGGAGGGAGCAGATGAAGGTGGAGTCCCTGGAGAGGGCCCTTCAGCAGAAGAATCA
AGAGATTGAAGAACTGACAAAAATCTGTGACGAGTTGATCGCAAAGCTTGGAAAGGCCGACTGA
GAGTCGTCCCGTGAGCTGTGCAGATCCGAGTCTGGCTGCTTCTGTCGTGACCACATTATCTTGC
CTTATCCAGAAATATCTCCCCCCTTTGCAGAGAAAAATAACTGTTTCAAAAGCACATGCCTGCT
GCTGCCCGCCTGTCCGTCCCGCTTCGCCGCGCGCAGCTGTGGCCAGGCTGGTGGAGATGGAGTC
ACGTGACCGCAGAGCCCCGCGACCAGGCTGCCAGCTTCCCTTAGGCACGCTGCTGCTGGGTCCG
GCTTATGCTTCTCCAACTTGAGTTCATCTCGCTGTCGTCCTTGCTTTTCCCAAGTTTGTGACAT
TTCTAATTTTGTGGCAACTGTGTGGGTTTATCTTCCCAGCTCCTGATATTTCTATGGCCTAGTT
AACCTTTAAAATTTTCAGGATCGTCAGTTTTATCGAAGCGGGGGACGGTCTGGCCCATCATTAC
GAACACTTTGTCTAGGAGGCTCCAAGCTCCCTTTTATTTACAGACTGTACATTCTGCTGCTCCC
CACCCCACCCCCTCGATGCAGATAAGAGCCTCTAGGGAGGAGTTTGGCTACATAAATAAATATA
GACTCTTATTTTGAAACAGAGCCGTAGGTCTAAAAGCCAGCTTCAGACTTCACAGGGGCTGGGA
ATGTAGCTCCGTTAGTAGACAGCTTCCTGTACACAGAGCCCTGGGTTTGGCCCCCAGAATGTTG
GAGGGCGTGCCTGTAACCCAACCCTCCAGAGGTGGAGACAGGCTGATGAGAAATTTGAGGTCAT
CCTCAACTACATAGCCACTCGGAGGCCAGCCTGGACTAACTACATGGGGCCTTGCTTTACACAA
GGAGTGAGTGGAAGCATGGGGTATCCTAGCTAGTGGGAGATGGGACAGGACGATCACTTGAGCC
CAGAATTTAAGGACAGCAGTGCACCAGGCAAATAGTCCTTTTCTCAAAAATCCTACTAAACCTT
GAGTCAGGGTGGAGAGGTTGAGCGTGTGAAGGCCAGGGGACATAGGTTTCACGTCTAGGGAAGA
TTTGCTGTGCCGTCTCTTGCCCCGGTATTTGGACACCTCAGAAGCTCAGCGTGGCCCCACGCGC
TCATGCTGAAAGCAGCATCACGTGACCAGCAGCATAAACCTCCCTCAGAGTTGGCCTAGGCTGC
ATGTGTCCACTTGGGGCCGGTTAGTCTCCGAAACAAAGTCAACTTTTGTCATCTATTTGAAACA
CACACAAATGGGACTTGGGAAAGGTTTAGTTGATCTTGTTAAAAGATGGTGGACGCTTACAAAC
CAGTTAGAGTGAAGATCCTTAATCTTCTATGTTTACTAGCAGACAGCACCCTTTTAGAGACTTA
AAAACAACAGCCACAACAAATTCTTCCTTCCTTACTCAAGCTGGGTTTTAAAACAAAACAGGCA
GTAAAGAGTCCAGTAGCTCCCCTGGGCATATTTTAAGCAAAGACTGCTTGAATGCTGGGGAGGG
GAATAGGGAGAAGTTCCACATAGACAAAACAAAAGTCTGTGAACTCATACTGGACTTACACTGG
GGGACATTAACCCCCAAATAAGAATACCCCACATTGGCACTGGTGACTTCCTTTCCATGATAGG
CAAAGCCAAACCCATTTAGGTTTTATTGCTTTTATTTTGCCTTAATCTTAACACCCTGAGTCTT
CATAGTAAGTGTACACTATTTAGTACACATATATTTTCCTCCTTGTAACACCGTTGCATGAGCC
AAGTCCAGCAATGAATTGTGCCTCGTAGAGAGCCTCCATAGATCTTATAAACAGTGTCCTTAGC
AGCGCGTTACCATGTGGTGTAACCTTTAGCCCCAGGGAAGCAATGTCTTTTCAAGCTAGAAATC
ACATCTTGTCAATATGCATTTATTATAACAGGTGCTTAAGTTAGGCTGTATCCTGAGGCCTACT
GTCTTTTAACCTTTTGTACAAAAAAACACAAGCAGACAGAAGTTATCTGTGGTTGGAGAAATGG
CTTGACAATCATTTGGGCTCTGAATTTAGTCACAGTGGCTTAACGTGAAGCCCATAGCAGTACA
TGTAGTGTCGTGTTCAAGTGTCTTCAAGGGATAGACCCAGTGCCAGCTTGGCCATCTTCCTCAA
GGGAAGCTAATTTTGCATTTTAAGAACCCCCCTCCCCAACCCCGCGGAAATTTCTGCTACAGTG
TTACAGCGGCATCAGTGTGTGTGCTCATTTTATATTGACTTATTTTCAGTATGCAAGCCTTCAG
AGTGGTCTCTATTATAAACCTCTTATTTCCTATTTTTTTTTTCTTTTTGGTAGTACTGAGATTG
TACCCAGGGTCTTGAACATGCCAGGCAAGTGCTTGGCCGTGGGACTACATCTTCCCCGGTCATC
TTTTTAAGCATGCATGTTTTTAAAGCATCTTGTGCTGTGCTGTGTGTAACCAAGGCACAGGAGA
GGAGTGGTGACCGTCCCTCCTTGCCTCACTGGCAGACAGGCCTTGAAAAACAGGCCTTGATAAA
TGTCCCCATGTGCAGAGGGCATAAACTAGCCCTCTAAGCAATGTTTGCCAGTGGCCTCTTAGTC
ACCCCCATCACCAGGAAATGTCACAGCTTCTAGCTTCTGGAGATTCTCCAACAGGAATAAGAAT
GTAGCCCGCGCAGCTGGCAAATTAAGAAGATATACTAGTCTATTTATTTTCTTTTAATTAAATA
AGCCCTAAAAAGCTTTTTAGCACTCTGGAGAGTAAAAATATAAAGTTTTCTTCACCACATGCTG
GGGGCCAAATGCTTTTTTTGTTAAGTGATTAAAAGGGGGTTGGGGTGGGGGACCAGGCCTGGTG
GCACATGCAGATAATCCTAAGTAAATCCCAGCACCCTGGAGGCAGGCAGGGACCAGAAGTTCAG
GCTTTGACTGGGCTATACTGTGAGGCCCTTGTCTTCTCGAGAGCTGGAGCTGTGACTCAGTGGT
AGTGTTGCCAATCCCCGGCACTGTAAAAATAAATAACAAAAGATTTAAAATACAAGAGAAATGC
TCCGAGTGGCTTAGGAATATTAGGTGATCTTGTTGACACTCTCAGCATAGAACTGTTCCTTCAG
TTCCGCACTGCCAAAGTCCAGACGACTCTTGCCTGTCAGTCAGTACCACAGACGGACGGGTTTA
CTGTGTGCTGGAAGGCGGCGCTTACTCTGTTTGGAGACCGGGAGTCCCCCCAGACTTGGTATTC
TCTGAAGCTCTAGTGCGGACTCAAGCGTCTTCAGAAACAGACCAAACTAACAAGTGCGGAACGG
AGCACGCGGTTGGGAGGCCGGGAGCGAGCGCGTAGGATGAAATCCCTGACTTCAGGGTTAGAGC
TTAAGCTAAACTTTGTTTCCAACCCTGTTCTCCCTGCAGACTTGGCACTGCCTGCGCACACATG
TCTGCACACTCGCTCGGCAGCCTGGGTTGAGCCTGGCCGGCCGAAGTCCTCGCTTTCAGCAAAG
ATCGCACAGGCTAGAAAGGGCACTCGGCGGCCCACGGGCTTTCAGGATCTGTGGCCTAAGCTCA
AGGCATACTGAATTGAAGGTGGTGTGGACCTTCTGAAGCCCCTCCCGAATTCCCTGAGGCTCAT
TTCAGCTGGTGATCTCACGCCTCAGCTGCCCCTGCTGTCTCTGTGGGACTGTGGCCCTCTAAGC
TCGCTCTCAGGTTTTTTGTTTTTTTAAATCTTCTTGGGAAGAGAGAATATAGATGTTGAAAGAG
TACAAAATAGATTTAGGCAAGGAGTTTAGAGATGTCTATATTATGAAGCATTTTAAGGGTAACA
GATTATTATTTACTTACCAATGAACAGGTAAGGTCTGGGGATCCCAGACCGCCAAGCCAAAGGT
GGAAGAAATCGCCTTTCAAAAAGTTTTAACAATGAAGTTATTTCAAAGGAGACTAATGTCCAAG
AAAGGTTTGACTGGCCTCCAGATTCCGATTATTTTTTAAAAAGCAATTTACCAGGGCTGGGGAT
GTAGTTCAGTTGGTGACACACTTGCTCAGCACAAGTCCCTGAATGTCATTCCCCAGTGCTGGGG
GAAAATCAGAAAAAAAGAAATATTTACTACTAAGTCCTTCCTGATATGGAGAGAAAAGGGAGAC
GCGTGTAGAACCAGGTCTTCTCCATAGGCGTTTCTAGAACAGTTCAGGCGAGCACTTGGCCCCT
CGGAGAGCGAAGCTCGCACTTCTAGTCCTTCCCACCCAGATGCAGCGCCCCCTGTCTGTGCCTC
TCAGCATGCAGTTAGATTTGGACAAATAAGATTCCCGAGGAATGACTTTCTCCATGACACCACG
GTTTCAGCTTTATGTAAACACACACACATCCCCTTATAGTTCTAGTCTGGAGATGCTGCTGCCA
TGCTGGCCTCAGGTAGACTGTGTGATGTTTTTACCACTCAGAGGAGGCCAAGCGTGGGGCTGAG
GTGTGGCCTGAACCTTCCCTGTATGGAGTCTTCAATACCAACTCTCAGGATGCCACGCTACCCC
CTGCCTTCTCGTGGCATCTGAGTACACTCAGCAAAAGCACTTCCCCACATCACGAAAGAAACTG
ATTCGGTATTTGTGAATCACTTTGCAAATGGACACACAGAAATCTGAGCTCTGAAACTCCATCC
AGACCAGATACAGGGCAGTGTGAAGATCACACCCTCAGCCTCAGTGCTGTCCCTCAAAGTCCTT
GGGAGAGGACTCAGACACTCGGATGAGTCTCCAAGGCACCTGTCAACTTTCTAGTATTGCCGTT
AGCGAGTCTGTGTTTGCCAATAGATACCCACTGTACTAACGTGCCAAGTGTTTATTTGCACATC
TGCTTCCACTGTGTCCAGCACCCACCCCCCAACCCCACCTCNTGGTGCCCCGGAGTGGCAGGGG
GGCACACACTGCATTGACTCCTGCTGTCAGGACGGTGTTGTGCAGAATAATCATCCTCATAGAT
TTTATACACATAGTAATTCCCCTTTTTATATGTCAGGTAAATATTTGTAAAAGTTATACTCACA
CAAAAGAAATTATTATGATAATTACTAATATATTTTTTCCATGTTTCATTGCCTGAATAAAAAC
TGTTTACCACTGTT

hide sequence

RefSeq Acc Id:

XM_039094559 ⟹ XP_038950487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,515,041 - 73,598,395 (+)	NCBI
mRatBN7.2	16	66,812,378 - 66,895,736 (+)	NCBI

RefSeq Acc Id:

XM_039094561 ⟹ XP_038950489

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,515,016 - 73,598,395 (+)	NCBI
mRatBN7.2	16	66,812,232 - 66,895,736 (+)	NCBI

RefSeq Acc Id:

XM_063275443 ⟹ XP_063131513

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,543,161 - 73,598,395 (+)	NCBI

RefSeq Acc Id:

XM_063275444 ⟹ XP_063131514

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,515,122 - 73,598,395 (+)	NCBI

RefSeq Acc Id:

XM_063275445 ⟹ XP_063131515

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,515,059 - 73,598,395 (+)	NCBI

RefSeq Acc Id:

XM_063275446 ⟹ XP_063131516

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	73,515,029 - 73,578,520 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001004107	(Get FASTA)	NCBI Sequence Viewer
	XP_006253380	(Get FASTA)	NCBI Sequence Viewer
	XP_017455634	(Get FASTA)	NCBI Sequence Viewer
	XP_017455635	(Get FASTA)	NCBI Sequence Viewer
	XP_038950487	(Get FASTA)	NCBI Sequence Viewer
	XP_038950489	(Get FASTA)	NCBI Sequence Viewer
	XP_063131513	(Get FASTA)	NCBI Sequence Viewer
	XP_063131514	(Get FASTA)	NCBI Sequence Viewer
	XP_063131515	(Get FASTA)	NCBI Sequence Viewer
	XP_063131516	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM09051	(Get FASTA)	NCBI Sequence Viewer
	EDM09052	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000030626
	ENSRNOP00000030626.4
	ENSRNOP00000075027
	ENSRNOP00000075027.1
	ENSRNOP00000078214
	ENSRNOP00000078214.1
	ENSRNOP00000092100
	ENSRNOP00000092100.1

RefSeq Acc Id:

NP_001004107 ⟸ NM_001004107

- UniProtKB:

D4A927 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAFSPWQILSPVQWAKWTWSAVRGSGAGEDEAGGPEGDPEEEEDSQAETKSLSFSSDSEGNFET
PEAETPIRSSLKESCDSSLGLSEPEAKPQESREADEQPVAELIEKCSPDACSRSSGNEAPQATI
DSYSVKDVRGKAEHDVSKISVVRPFSIETRDCTDDPAAHGCVPVLPGKALPSTTPEATQDQPMM
DRGMGVTLEAFTEVNLKTGGPCPEPVPSRSRLRKPKPVSLRKKTAGDNTFEPEMLMEGSLLPKA
SSPWIPEESDKNSNPSLLRGLRAHKSPLNLKEAASIHCNSAGDSGVDLQEGSRASPLKLDDFTE
DGRSVETRSALPKQPGRKPSHKLAPNIRKDGSSKPVGVEQLTDPTIEDASLAQTSPKLDPSKWG
RPNFNSFGSCPILQSSPPVSSKGSYHLDPDNVNADESGDPCKPATALTGSGFCSATGNHVNEIL
DSPKKAQSRLITSGCKVKKYETQSLDLDACSQDEGAVISQIADIPNRDGHATDEEKLASTSCSQ
KSAGAEVKGVEKEAYQKMEEEELTVHGLLETSSEKAPVSVACGGESPLDGICLSEADKTAVLTL
IREEIITKEIEANEWKKKYEETREEVLEMRKIVAEYEKTIAQMIEDEQRTNMSSQKSFQQLTME
KEQALADLNSVERSLSDLFRRYENLKGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKVHA
EEKLDRANEEIAQVRSKAKAESAALHAGLRREQMKVESLERALQQKNQEIEELTKICDELIAKL
GKAD

hide sequence

RefSeq Acc Id:	XP_006253380 ⟸ XM_006253318
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5Y233 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAFSPWQILSPVQWAKWTWSAVRGSGAGEDEAGGPEGDPEEEEDSQAETKSLSFRSGCKVKKYE TQSLDLDACSQDEGAVISQIADIPNRDGHATDEEKLASTSCSQKSAGAEVKGVEKEAYQKMEEE ELTVHGLLETSSEKAPVSVACGGESPLDGICLSEADKTAVLTLIREEIITKEIEANEWKKKYEE TREEVLEMRKIVAEYEKTIAQMIEDEQRTNMSSQKSFQQLTMEKEQALADLNSVERSLSDLFRR YENLKGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKVHAEEKLDRANEEIAQVRSKAKAE SAALHAGLRREQMKVESLERALQQKNQEIEELTKICDELIAKLGKAD hide sequence

RefSeq Acc Id:	XP_017455635 ⟸ XM_017600146
- Peptide Label:	isoform X1
- UniProtKB:	D4A927 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGGSHSQGRGPGLAWETPPTAVDAASDSEGNFETPEAETPIRSSLKESCDSSLGLSEPEAKPQE SREADEQPVAELIEKCSPDACSRSSGNEAPQATIDSYSVKDVRGKAEHDVSKISVVRPFSIETR DCTDDPAAHGCVPVLPGKALPSTTPEATQDQPMMDRGMGVTLEAFTEVNLKTGGPCPEPVPSRS RLRKPKPVSLRKKTAGDNTFEPEMLMEGSLLPKASSPWIPEESDKNSNPSLLRGLRAHKSPLNL KEAASIHCNSAGDSGVDLQEGSRASPLKLDDFTEDGRSVETRSALPKQPGRKPSHKLAPNIRKD GSSKPVGVEQLTDPTIEDASLAQTSPKLDPSKWGRPNFNSFGSCPILQSSPPVSSKGSYHLDPD NVNADESGDPCKPATALTGSGFCSATGNHVNEILDSPKKAQSRLITTSEQVKFLCFLLSGCKVK KYETQSLDLDACSQDEGAVISQIADIPNRDGHATDEEKLASTSCSQKSAGAEVKGVEKEAYQKM EEEELTVHGLLETSSEKAPVSVACGGESPLDGICLSEADKTAVLTLIREEIITKEIEANEWKKK YEETREEVLEMRKIVAEYEKTIAQMIEDEQRTNMSSQKSFQQLTMEKEQALADLNSVERSLSDL FRRYENLKGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKVHAEEKLDRANEEIAQVRSKA KAESAALHAGLRREQMKVESLERALQQKNQEIEELTKICDELIAKLGKAD hide sequence

RefSeq Acc Id:	XP_017455634 ⟸ XM_017600145
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K9K2 (UniProtKB/TrEMBL), D4A927 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAFSPWQILSPVQWAKWTWSAVRGSGAGEDEAGGPEGDPEEEEDSQAETKSLSFSSDSEGNFET PEAETPIRSSLKESCDSSLGLSEPEAKPQESREADEQPVAELIEKCSPDACSRSSGNEAPQATI DSYSVKDVRGKAEHDVSKISVVRPFSIETRDCTDDPAAHGCVPVLPGKALPSTTPEATQDQPMM DRGMGVTLEAFTEVNLKTGGPCPEPVPSRSRLRKPKPVSLRKKTAGDNTFEPEMLMEGSLLPKA SSPWIPEESDKNSNPSLLRGLRAHKSPLNLKEAASIHCNSAGDSGVDLQEGSRASPLKLDDFTE DGRSVETRSALPKQPGRKPSHKLAPNIRKDGSSKPVGVEQLTDPTIEDASLAQTSPKLDPSKWG RPNFNSFGSCPILQSSPPVSSKGSYHLDPDNVNADESGDPCKPATALTGSGFCSATGNHVNEIL DSPKKAQSRLITTSEQVKFLCFLLSGCKVKKYETQSLDLDACSQDEGAVISQIADIPNRDGHAT DEEKLASTSCSQKSAGAEVKGVEKEAYQKMEEEELTVHGLLETSSEKAPVSVACGGESPLDGIC LSEADKTAVLTLIREEIITKEIEANEWKKKYEETREEVLEMRKIVAEYEKTIAQMIEDEQRTNM SSQKSFQQLTMEKEQALADLNSVERSLSDLFRRYENLKGVLEGFKKNEEALKKCAQDYLARVKQ EEQRYQALKVHAEEKLDRANEEIAQVRSKAKAESAALHAGLRREQMKVESLERALQQKNQEIEE LTKICDELIAKLGKAD hide sequence

Ensembl Acc Id:

ENSRNOP00000030626 ⟸ ENSRNOT00000035347

Ensembl Acc Id:

ENSRNOP00000075027 ⟸ ENSRNOT00000088462

RefSeq Acc Id:	XP_038950489 ⟸ XM_039094561
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038950487 ⟸ XM_039094559
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AHG9 (UniProtKB/TrEMBL), D4A927 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000078214 ⟸ ENSRNOT00000097760

Ensembl Acc Id:

ENSRNOP00000092100 ⟸ ENSRNOT00000106912

RefSeq Acc Id:	XP_063131516 ⟸ XM_063275446
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063131515 ⟸ XM_063275445
- Peptide Label:	isoform X5
- UniProtKB:	D4A927 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131514 ⟸ XM_063275444
- Peptide Label:	isoform X4
- UniProtKB:	D4A927 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063131513 ⟸ XM_063275443
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K9K2 (UniProtKB/TrEMBL), D4A927 (UniProtKB/TrEMBL)

Protein Domains

Transforming acidic coiled-coil-containing protein

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K9K2-F1-model_v2	AlphaFold	A0A0G2K9K2	1-784	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700172

Promoter ID:

EPDNEW_R10696

Type:

initiation region

Name:

Tacc1_1

Description:

transforming, acidic coiled-coil containing protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	71,629,516 - 71,629,576	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1303120	AgrOrtholog
BioCyc Gene	G2FUF-10955	BioCyc
Ensembl Genes	ENSRNOG00000016423	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000035347	ENTREZGENE
	ENSRNOT00000035347.6	UniProtKB/TrEMBL
	ENSRNOT00000088462	ENTREZGENE
	ENSRNOT00000088462.2	UniProtKB/TrEMBL
	ENSRNOT00000097760	ENTREZGENE
	ENSRNOT00000097760.1	UniProtKB/TrEMBL
	ENSRNOT00000106912	ENTREZGENE
	ENSRNOT00000106912.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.1700	UniProtKB/TrEMBL
InterPro	Alp7/TACC	UniProtKB/TrEMBL
	TACC	UniProtKB/TrEMBL
NCBI Gene	306562	ENTREZGENE
PANTHER	PTHR13924	UniProtKB/TrEMBL
	TRANSFORMING ACIDIC COILED-COIL-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
Pfam	TACC	UniProtKB/TrEMBL
PhenoGen	Tacc1	PhenoGen
RatGTEx	ENSRNOG00000016423	RatGTEx
UniProt	A0A0G2K9K2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y233	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AHG9	ENTREZGENE, UniProtKB/TrEMBL
	A6IW20_RAT	UniProtKB/TrEMBL
	A6IW21_RAT	UniProtKB/TrEMBL
	D4A927	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-30	Tacc1	transforming, acidic coiled-coil containing protein 1	Tacc1a	transforming, acidic coiled-coil containing protein 1a	Symbol and Name updated	1299863	APPROVED
2005-02-14	Tacc1a	transforming, acidic coiled-coil containing protein 1a			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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