Gene: Spata5 (spermatogenesis associated 5) Rattus norvegicus
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Symbol: Spata5
Name: spermatogenesis associated 5
Description: ENCODES a protein that exhibits ATP binding (inferred); INVOLVED IN brain development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Epilepsy, Hearing Loss, and Mental Retardation Syndrome (ortholog); schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; indole-3-methanol
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC361935; spermatogenesis-associated protein 5
Orthologs:
Homo sapiens (human) : SPATA5 (spermatogenesis associated 5)  HGNC  Alliance
Mus musculus (house mouse) : Spata5 (spermatogenesis associated 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata5 (spermatogenesis associated 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA5 (spermatogenesis associated 5)
Canis lupus familiaris (dog) : SPATA5 (spermatogenesis associated 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata5 (spermatogenesis associated 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02124,149,872 - 124,341,138 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02143,758,068 - 143,950,578 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42123,962,875 - 124,154,127 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12123,913,002 - 124,104,391 (+)NCBI
Celera2115,253,057 - 115,441,808 (+)NCBICelera
Cytogenetic Map2q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Spata5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310478
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE