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Growth-associated gene expression after stroke: evidence for a growth-promoting region in peri-infarct cortex. |
Carmichael ST, etal., Exp Neurol. 2005 Jun;193(2):291-311.
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2. |
Decorin suppresses neurocan, brevican, phosphacan and NG2 expression and promotes axon growth across adult rat spinal cord injuries. |
Davies JE, etal., Eur J Neurosci. 2004 Mar;19(5):1226-42.
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3. |
Composition of perineuronal net extracellular matrix in rat brain: a different disaccharide composition for the net-associated proteoglycans. |
Deepa SS, etal., J Biol Chem. 2006 Jun 30;281(26):17789-800. Epub 2006 Apr 27.
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4. |
Chondroitin sulfate proteoglycans in the developing central nervous system. I. cellular sites of synthesis of neurocan and phosphacan. |
Engel M, etal., J Comp Neurol 1996 Feb 26;366(1):34-43.
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5. |
Intrathecal delivery of mesenchymal stromal cells protects the structure of altered perineuronal nets in SOD1 rats and amends the course of ALS. |
Forostyak S, etal., Stem Cells. 2014 Aug 11. doi: 10.1002/stem.1812.
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Tyrosine phosphorylation of ErbB4 is enhanced by PSD95 and repressed by protein tyrosine phosphatase receptor type Z. |
Fujikawa A, etal., J Biochem. 2007 Sep;142(3):343-50. Epub 2007 Jul 23.
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7. |
Consensus substrate sequence for protein-tyrosine phosphatase receptor type Z. |
Fujikawa A, etal., J Biol Chem. 2011 Oct 28;286(43):37137-46. doi: 10.1074/jbc.M111.270140. Epub 2011 Sep 2.
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Protein tyrosine phosphatase receptor type Z is inactivated by ligand-induced oligomerization. |
Fukada M, etal., FEBS Lett. 2006 Jul 24;580(17):4051-6. Epub 2006 Jun 27.
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9. |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. |
Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
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10. |
Rat ISS GO annotations from GOA human gene data--August 2006 |
GOA data from the GO Consortium
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11. |
Interactions with tenascin and differential effects on cell adhesion of neurocan and phosphacan, two major chondroitin sulfate proteoglycans of nervous tissue. |
Grumet M, etal., J Biol Chem 1994 Apr 22;269(16):12142-6.
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Synaptic localization of receptor-type protein tyrosine phosphatase zeta/beta in the cerebral and hippocampal neurons of adult rats. |
Hayashi N, etal., Brain Res. 2005 Jul 19;1050(1-2):163-9.
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Chondroitin sulfate proteoglycan phosphacan associates with parallel fibers and modulates axonal extension and fasciculation of cerebellar granule cells. |
Hayashi N, etal., Mol Cell Neurosci. 2005 Nov;30(3):364-77. Epub 2005 Sep 16.
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14. |
Neuronal expression of the chondroitin sulfate proteoglycans receptor-type protein-tyrosine phosphatase beta and phosphacan. |
Hayashi N, etal., Neuroscience. 2005;131(2):331-48.
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15. |
Inhibitory effects of neurocan and phosphacan on neurite outgrowth from retinal ganglion cells in culture. |
Inatani M, etal., Invest Ophthalmol Vis Sci. 2001 Jul;42(8):1930-8.
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16. |
The chondroitin sulfate proteoglycans neurocan, brevican, phosphacan, and versican are differentially regulated following spinal cord injury. |
Jones LL, etal., Exp Neurol. 2003 Aug;182(2):399-411.
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17. |
Two types of brain chondroitin sulfate proteoglycan: their distribution and possible functions in the rat embryo. |
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18. |
Identification of GIT1/Cat-1 as a substrate molecule of protein tyrosine phosphatase zeta /beta by the yeast substrate-trapping system. |
Kawachi H, etal., Proc Natl Acad Sci U S A. 2001 Jun 5;98(12):6593-8. Epub 2001 May 29.
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19. |
Expression of brain specific chondroitin sulfate proteoglycans, neurocan and phosphacan, in the developing and adult hippocampus of Ihara's epileptic rats. |
Kurazono S, etal., Brain Res. 2001 Apr 13;898(1):36-48.
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20. |
Recombinant core protein fragment of phosphacan, a brain specific chondroitin sulfate proteoglycan, promote excitotoxic cell death of cultured rat hippocampal neurons. |
Kurazono S, etal., Neurosci Lett. 2001 May 25;304(3):169-72.
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21. |
Regulated expression during development and following sciatic nerve injury of mRNAs encoding the receptor tyrosine phosphatase HPTPzeta/RPTPbeta. |
Li J, etal., Brain Res Mol Brain Res. 1998 Sep 18;60(1):77-88.
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22. |
6B4 proteoglycan/phosphacan is a repulsive substratum but promotes morphological differentiation of cortical neurons. |
Maeda N and Noda M, Development. 1996 Feb;122(2):647-58.
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23. |
Involvement of receptor-like protein tyrosine phosphatase zeta/RPTPbeta and its ligand pleiotrophin/heparin-binding growth-associated molecule (HB-GAM) in neuronal migration. |
Maeda N and Noda M, J Cell Biol. 1998 Jul 13;142(1):203-16.
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24. |
6B4 proteoglycan/phosphacan, an extracellular variant of receptor-like protein-tyrosine phosphatase zeta/RPTPbeta, binds pleiotrophin/heparin-binding growth-associated molecule (HB-GAM). |
Maeda N, etal., J Biol Chem. 1996 Aug 30;271(35):21446-52.
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25. |
A receptor-like protein-tyrosine phosphatase PTPzeta/RPTPbeta binds a heparin-binding growth factor midkine. Involvement of arginine 78 of midkine in the high affinity binding to PTPzeta. |
Maeda N, etal., J Biol Chem. 1999 Apr 30;274(18):12474-9.
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Changes in the amounts of chondroitin sulfate proteoglycans in rat brain after neonatal hypoxia-ischemia. |
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27. |
Transient expression of juvenile-type neurocan by reactive astrocytes in adult rat brains injured by kainate-induced seizures as well as surgical incision. |
Matsui F, etal., Neuroscience 2002;112(4):773-81.
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28. |
Phosphacan, a chondroitin sulfate proteoglycan of brain that interacts with neurons and neural cell-adhesion molecules, is an extracellular variant of a receptor-type protein tyrosine phosphatase. |
Maurel P, etal., Proc Natl Acad Sci U S A 1994 Mar 29;91(7):2512-6.
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29. |
Chondroitin sulfate proteoglycans in the developing central nervous system. II. Immunocytochemical localization of neurocan and phosphacan. |
Meyer-Puttlitz B, etal., J Comp Neurol 1996 Feb 26;366(1):44-54.
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30. |
Rat ISS GO annotations from MGI mouse gene data--August 2006 |
MGD data from the GO Consortium
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31. |
Complex-type asparagine-linked oligosaccharides on phosphacan and protein-tyrosine phosphatase-zeta/beta mediate their binding to neural cell adhesion molecules and tenascin. |
Milev P, etal., J Biol Chem 1995 Oct 20;270(42):24650-3.
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32. |
The core protein of the chondroitin sulfate proteoglycan phosphacan is a high-affinity ligand of fibroblast growth factor-2 and potentiates its mitogenic activity. |
Milev P, etal., J Biol Chem. 1998 Aug 21;273(34):21439-42.
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33. |
Interactions of the chondroitin sulfate proteoglycan phosphacan, the extracellular domain of a receptor-type protein tyrosine phosphatase, with neurons, glia, and neural cell adhesion molecules. |
Milev P, etal., J Cell Biol 1994 Dec;127(6 Pt 1):1703-15.
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34. |
alpha4beta1- and alpha6beta1-integrins are functional receptors for midkine, a heparin-binding growth factor. |
Muramatsu H, etal., J Cell Sci. 2004 Oct 15;117(Pt 22):5405-15. doi: 10.1242/jcs.01423. Epub 2004 Oct 5.
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35. |
Selective alterations of glycosaminoglycans synthesis and proteoglycan expression in rat cortex and hippocampus in pilocarpine-induced epilepsy. |
Naffah-Mazzacoratti MG, etal., Brain Res Bull. 1999 Nov 1;50(4):229-39.
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36. |
Electronic Transfer of LocusLink and RefSeq Data |
NCBI rat LocusLink and RefSeq merged data July 26, 2002
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37. |
Characterization and developmental regulation of proteoglycan-type protein tyrosine phosphatase zeta/RPTPbeta isoforms. |
Nishiwaki T, etal., J Biochem. 1998 Mar;123(3):458-67.
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38. |
Developmentally regulated expression of brain-specific chondroitin sulfate proteoglycans, neurocan and phosphacan, in the postnatal rat hippocampus. |
Okamoto M, etal., Cell Tissue Res. 2001 Nov;306(2):217-29.
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39. |
Kainic acid-induced convulsions cause prolonged changes in the chondroitin sulfate proteoglycans neurocan and phosphacan in the limbic structures. |
Okamoto M, etal., Exp Neurol. 2003 Nov;184(1):179-95.
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40. |
OMIM Disease Annotation Pipeline |
OMIM Disease Annotation Pipeline
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41. |
Haptotactic migration induced by midkine. Involvement of protein-tyrosine phosphatase zeta. Mitogen-activated protein kinase, and phosphatidylinositol 3-kinase. |
Qi M, etal., J Biol Chem. 2001 May 11;276(19):15868-75.
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42. |
Regulation of tyrosine phosphorylation and protein tyrosine phosphatases during oligodendrocyte differentiation. |
Ranjan M and Hudson LD, Mol Cell Neurosci. 1996 May;7(5):404-18.
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43. |
ClinVar Automated Import and Annotation Pipeline |
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
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44. |
Data Import for Chemical-Gene Interactions |
RGD automated import pipeline for gene-chemical interactions
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45. |
Hippocampal gene expression profiling in spatial discrimination learning. |
Robles Y, etal., Neurobiol Learn Mem. 2003 Jul;80(1):80-95.
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46. |
Phosphacan and neurocan are repulsive substrata for adhesion and neurite extension of adult rat dorsal root ganglion neurons in vitro. |
Sango K, etal., Exp Neurol. 2003 Jul;182(1):1-11.
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47. |
A chondroitin sulfate proteoglycan PTPzeta /RPTPbeta regulates the morphogenesis of Purkinje cell dendrites in the developing cerebellum. |
Tanaka M, etal., J Neurosci. 2003 Apr 1;23(7):2804-14.
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48. |
The PTN-PTPRZ signal activates the AFAP1L2-dependent PI3K-AKT pathway for oligodendrocyte differentiation: Targeted inactivation of PTPRZ activity in mice. |
Tanga N, etal., Glia. 2019 May;67(5):967-984. doi: 10.1002/glia.23583. Epub 2019 Jan 22.
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49. |
Tentative Sequence Identification Numbers |
Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
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50. |
Soluble forms of NCAM and F3 neuronal cell adhesion molecules promote Schwann cell migration: identification of protein tyrosine phosphatases zeta/beta as the putative F3 receptors on Schwann cells. |
Thomaidou D, etal., J Neurochem. 2001 Aug;78(4):767-78.
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51. |
Chronic erythropoietin-mediated effects on the expression of astrocyte markers in a rat model of contusive spinal cord injury. |
Vitellaro-Zuccarello L, etal., Neuroscience. 2008 Jan 24;151(2):452-66. Epub 2007 Nov 7.
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52. |
Chondroitin sulfate proteoglycan expression pattern in hippocampal development: potential regulation of axon tract formation. |
Wilson MT and Snow DM, J Comp Neurol. 2000 Aug 28;424(3):532-46.
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