Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:central nervous system development
go back to main search page
Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development


show annotations for term's descendants           Sort by:
central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:78,702,974...78,764,847
Ensembl chr 7:78,703,231...78,764,847 		JBrowse link
G Adgra2 adhesion G protein-coupled receptor A2 involved_in IMP
IBA		 (MGI:4839817|PMID:21071672) UniProt
GO_Central		 PMID:21071672 GO_REF:0000033 MGI:4839817 NCBI chr 8:27,575,546...27,613,464
Ensembl chr 8:27,575,611...27,613,464 		JBrowse link
G Aldh3a2 aldehyde dehydrogenase family 3, subfamily A2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:61,114,240...61,158,267
Ensembl chr11:61,114,243...61,158,290 		JBrowse link
G Aldh5a1 aldhehyde dehydrogenase family 5, subfamily A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:25,091,562...25,121,740
Ensembl chr13:25,091,562...25,121,644 		JBrowse link
G Ang angiogenin, ribonuclease, RNase A family, 5 involved_in NAS (MGI:3722461|PMID:17468498) UniProt PMID:17468498 MGI:3722461 NCBI chr14:51,328,607...51,339,462
Ensembl chr14:51,328,607...51,339,466 		JBrowse link
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:110,378,847...110,404,517
Ensembl chr 5:110,378,870...110,404,513 		JBrowse link
G Aplp1 amyloid beta precursor like protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:30,134,405...30,144,960
Ensembl chr 7:30,134,407...30,144,960 		JBrowse link
G Aplp2 amyloid beta precursor-like protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:31,060,853...31,123,144
Ensembl chr 9:31,060,853...31,123,111 		JBrowse link
G App amyloid beta precursor protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654 		JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IMP (MGI:2157648|PMID:11318878) UniProt PMID:11318878 MGI:2157648 NCBI chr 7:83,895,486...84,059,201
Ensembl chr 7:83,895,486...84,059,384 		JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:19,578,943...19,591,508
Ensembl chr16:19,578,958...19,591,503 		JBrowse link
G Bcan brevican involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:87,894,839...87,908,458
Ensembl chr 3:87,894,838...87,907,537 		JBrowse link
G Capg capping actin protein, gelsolin like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:72,515,265...72,539,966
Ensembl chr 6:72,521,374...72,539,966 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Chrd chordin acts_upstream_of_or_within IMP (PMID:10688202) MGI PMID:10688202 NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:11823447) MGI PMID:11823447 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Col2a1 collagen, type II, alpha 1 involved_in IEP (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Cox7b cytochrome c oxidase subunit 7B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:105,059,306...105,066,056
Ensembl chr  X:105,059,306...105,066,056 		JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 acts_upstream_of_or_within IGI
IMP		 (PMID:17067568) MGI PMID:17067568 NCBI chr19:37,686,186...37,689,984
Ensembl chr19:37,686,246...37,689,984 		JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily c, polypeptide 1 acts_upstream_of_or_within IGI (PMID:17067568) MGI PMID:17067568 NCBI chr19:37,673,560...37,681,774
Ensembl chr19:37,674,029...37,681,846 		JBrowse link
G Dab1 disabled 1 involved_in TAS (MGI:85812|PMID:9009273) UniProt PMID:9009273 MGI:85812 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Dhx30 DExH-box helicase 30 involved_in IDA (MGI:5616495|PMID:25219788) UniProt PMID:25219788 MGI:5616495 NCBI chr 9:109,913,387...109,946,728
Ensembl chr 9:109,913,388...109,946,898 		JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in IEP (MGI:2183620|PMID:12055180) UniProt PMID:12055180 MGI:2183620 NCBI chr 4:115,772,316...115,797,794
Ensembl chr 4:115,772,316...115,797,123 		JBrowse link
G Dner delta/notch-like EGF repeat containing involved_in ISO (PMID:11950833) UniProt PMID:11950833 NCBI chr 1:84,347,560...84,673,942
Ensembl chr 1:84,347,560...84,673,942 		JBrowse link
G Drp2 dystrophin related protein 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr  X:133,304,868...133,357,323
Ensembl chr  X:133,305,300...133,357,322 		JBrowse link
G Dscam DS cell adhesion molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:96,388,652...96,971,935
Ensembl chr16:96,392,040...96,971,952 		JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:45,338,735...45,665,011
Ensembl chr 9:45,337,926...45,665,010 		JBrowse link
G Ecrg4 ECRG4 augurin precursor involved_in ISS
IBA		 (MGI:6316455|PMID:21349154) UniProt
GO_Central		 PMID:21349154 GO_REF:0000033 MGI:6316455 NCBI chr 1:43,769,762...43,781,724
Ensembl chr 1:43,769,762...43,781,738 		JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B, subunit 2 beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:85,266,255...85,273,402
Ensembl chr12:85,266,255...85,273,402 		JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 involved_in IMP (MGI:3850815|PMID:19185337) UniProt PMID:19185337 MGI:3850815 NCBI chr14:65,767,895...65,830,561
Ensembl chr14:65,767,898...65,830,524 		JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Emx2 empty spiracles homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:20675713) MGI PMID:20675713 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within IMP (PMID:12700164) MGI PMID:12700164 NCBI chr  X:67,722,144...67,761,569
Ensembl chr  X:67,722,147...67,761,569 		JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha 4 acts_upstream_of_or_within IMP (PMID:17005728) MGI PMID:17005728 NCBI chr 5:71,727,077...71,815,651
Ensembl chr 5:71,727,092...71,815,651 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within IMP (PMID:18346921) MGI PMID:18346921 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273 		JBrowse link
G Gba2 glucosidase beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:43,566,928...43,578,893
Ensembl chr 4:43,566,928...43,578,873 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI
IMP		 (PMID:12435628)
(PMID:12435629)		 MGI PMID:12435628 PMID:12435629 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Glis2 GLIS family zinc finger 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:4,412,217...4,443,076
Ensembl chr16:4,412,577...4,442,788 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within IMP (PMID:11787818) MGI PMID:11787818 NCBI chr 4:135,269,199...135,300,943
Ensembl chr 4:135,269,199...135,300,941 		JBrowse link
G Gsn gelsolin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:35,146,371...35,197,914
Ensembl chr 2:35,146,392...35,197,904 		JBrowse link
G Gsx1 GS homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:147,125,492...147,127,753
Ensembl chr 5:147,125,506...147,127,757 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:11731457), (PMID:12724834) MGI PMID:11731457 PMID:12724834 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:89,688,654...89,759,951
Ensembl chr13:89,687,915...89,759,771 		JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:87,927,865...87,934,818
Ensembl chr 3:87,929,057...87,934,890 		JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:78,766,775...78,783,100
Ensembl chr 7:78,764,850...78,780,766 		JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,536,179...70,543,512
Ensembl chr 8:70,536,107...70,543,512 		JBrowse link
G Helt helt bHLH transcription factor acts_upstream_of_or_within IMP (PMID:16968817) MGI PMID:16968817 NCBI chr 8:46,745,080...46,747,785
Ensembl chr 8:46,745,076...46,747,708 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within IMP (PMID:9398841) MGI PMID:9398841 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878 		JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in IEP (MGI:73693|PMID:7655079) UniProt PMID:7655079 MGI:73693 NCBI chr 4:135,871,133...135,872,703
Ensembl chr 4:135,870,808...135,873,066 		JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent acts_upstream_of_or_within IMP
IGI		 (PMID:9875844)
(PMID:10911993)
(PMID:9889105)		 MGI PMID:9875844 PMID:9889105 PMID:10911993 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IMP (PMID:15148302) MGI PMID:15148302 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310 		JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:37,009,239...37,014,922
Ensembl chr10:37,009,371...37,014,916 		JBrowse link
G Marcksl1 MARCKS-like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:129,407,374...129,409,774
Ensembl chr 4:129,407,374...129,409,778 		JBrowse link
G Mir124a-1 microRNA 124a-1 acts_upstream_of_or_within IMP (PMID:17403776) MGI PMID:17403776 NCBI chr14:64,828,106...64,828,190
Ensembl chr14:64,828,106...64,828,190 		JBrowse link
G Mir124a-2 microRNA 124a-2 acts_upstream_of_or_within IMP (PMID:17403776) MGI PMID:17403776 NCBI chr 3:17,849,826...17,849,934
Ensembl chr 3:17,849,826...17,849,934 		JBrowse link
G Mir124a-3 microRNA 124a-3 acts_upstream_of_or_within IMP (PMID:17403776) MGI PMID:17403776 NCBI chr 2:180,535,833...180,535,900
Ensembl chr 2:180,535,833...180,535,900 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:29,678,821...29,683,468
Ensembl chr 5:29,678,032...29,683,468 		JBrowse link
G Msi1 musashi RNA-binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:115,567,734...115,593,757
Ensembl chr 5:115,567,658...115,593,757 		JBrowse link
G Msi2 musashi RNA-binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:88,230,208...88,609,197
Ensembl chr11:88,230,208...88,609,339 		JBrowse link
G Mtf1 metal response element binding transcription factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:124,696,342...124,743,593
Ensembl chr 4:124,695,897...124,743,593 		JBrowse link
G Ncan neurocan involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,545,735...70,573,494
Ensembl chr 8:70,545,735...70,573,523 		JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within IMP (PMID:15649943) MGI PMID:15649943 NCBI chr 7:61,998,025...61,999,676
Ensembl chr 7:61,996,317...62,000,010 		JBrowse link
G Ngfr nerve growth factor receptor (TNFR superfamily, member 16) acts_upstream_of_or_within IMP (PMID:11978834) MGI PMID:11978834 NCBI chr11:95,459,644...95,478,524
Ensembl chr11:95,459,644...95,478,561 		JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:10688202) MGI PMID:10688202 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Norad non-coding RNA activated by DNA damage involved_in IMP (PMID:30735131) MGI PMID:30735131 NCBI chr 2:156,229,983...156,234,899
Ensembl chr 2:156,229,980...156,234,921 		JBrowse link
G Noto notochord homeobox involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:85,400,851...85,405,859
Ensembl chr 6:85,400,868...85,405,859 		JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IDA
ISO		 (MGI:2447374|PMID:12182881) UniProt
MGI		 PMID:12182881 GO_REF:0000119 MGI:2447374 MGI:4834177 NCBI chr12:44,375,568...44,651,977
Ensembl chr12:44,375,668...44,648,747 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IMP (PMID:12652306)
(PMID:11731459)		 MGI PMID:11731459 PMID:12652306 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pax2 paired box 2 involved_in IEP (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in IEP (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Pias4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within IEP (MGI:1861161|PMID:10854042) UniProt PMID:10854042 MGI:1861161 NCBI chr10:80,989,795...81,003,554
Ensembl chr10:80,989,100...81,003,757 		JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within IMP (PMID:12091320) MGI PMID:12091320 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:11900467) GO_Central
MGI		 PMID:11900467 GO_REF:0000033 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Runx1 runt related transcription factor 1 acts_upstream_of_or_within IMP (PMID:16174759) MGI PMID:16174759 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037 		JBrowse link
G Scin scinderin involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:40,109,768...40,184,227
Ensembl chr12:40,109,768...40,184,227 		JBrowse link
G Sema6b sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:56,430,085...56,447,343
Ensembl chr17:56,430,085...56,447,343 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:12435628) MGI PMID:12435628 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Slc2a1 solute carrier family 2 (facilitated glucose transporter), member 1 acts_upstream_of_or_within ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:118,966,001...118,994,527
Ensembl chr 4:118,965,908...118,995,180 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:12435628) GO_Central
MGI		 PMID:12435628 GO_REF:0000033 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IEP (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Spink5 serine peptidase inhibitor, Kazal type 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:44,092,612...44,155,554
Ensembl chr18:44,096,302...44,155,568 		JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IMP
ISO		 (MGI:6742151|PMID:34211179) UniProt
MGI		 PMID:34211179 GO_REF:0000119 MGI:4834177 MGI:6742151 NCBI chr11:30,049,395...30,218,384
Ensembl chr11:30,049,395...30,218,175 		JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within IGI (PMID:19786569) MGI PMID:19786569 NCBI chr15:34,875,645...35,155,990
Ensembl chr15:34,875,642...35,179,067 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within IGI (PMID:19786569) MGI PMID:19786569 NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444 		JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex acts_upstream_of_or_within IMP (PMID:19624305) MGI PMID:19624305 NCBI chr 4:118,219,937...118,266,483
Ensembl chr 4:118,219,940...118,266,470 		JBrowse link
G Thoc6 THO complex 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:23,887,592...23,892,891
Ensembl chr17:23,887,588...23,892,856 		JBrowse link
G Tlx1 T cell leukemia, homeobox 1 acts_upstream_of_or_within IMP (PMID:12023301) MGI PMID:12023301 NCBI chr19:45,138,531...45,145,382
Ensembl chr19:45,139,119...45,145,382 		JBrowse link
G Tlx3 T cell leukemia, homeobox 3 acts_upstream_of_or_within IMP (PMID:12023301) MGI PMID:12023301 NCBI chr11:33,150,748...33,158,588
Ensembl chr11:33,150,752...33,153,589 		JBrowse link
G Tpp1 tripeptidyl peptidase I involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:105,394,018...105,401,489
Ensembl chr 7:105,394,018...105,401,442 		JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within IGI (PMID:16199867) MGI PMID:16199867 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Trp53bp2 transformation related protein 53 binding protein 2 acts_upstream_of_or_within IMP (PMID:16702401) MGI PMID:16702401 NCBI chr 1:182,236,737...182,289,997
Ensembl chr 1:182,236,737...182,289,997 		JBrowse link
G Vax1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:10601035)
(PMID:10601036)		 GO_Central
MGI		 PMID:10601035 PMID:10601036 GO_REF:0000033 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488 		JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:83,688,221...83,715,295
Ensembl chr 6:83,688,246...83,715,295 		JBrowse link
G Vcan versican involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:89,803,429...89,891,146
Ensembl chr13:89,803,431...89,890,628 		JBrowse link
G Vps13b vacuolar protein sorting 13B involved_in IMP (MGI:6393201|PMID:31495077) UniProt PMID:31495077 MGI:6393201 NCBI chr15:35,371,264...35,931,375
Ensembl chr15:35,371,306...35,931,375 		JBrowse link
G Vps4b vacuolar protein sorting 4B acts_upstream_of_or_within IMP (PMID:28675177) MGI PMID:28675177 NCBI chr 1:106,698,518...106,724,455
Ensembl chr 1:106,691,801...106,724,458 		JBrowse link
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 acts_upstream_of_or_within IMP (PMID:9875844) MGI PMID:9875844 NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in IDA (MGI:3687421|PMID:8541544) UniProt PMID:8541544 MGI:3687421 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IGI (PMID:16598713) MGI PMID:16598713 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IGI (PMID:16598713) MGI PMID:16598713 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407 		JBrowse link
G Zfp523 zinc finger protein 523 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:28,396,136...28,424,860
Ensembl chr17:28,396,103...28,424,860 		JBrowse link
G Zic1 zinc finger protein of the cerebellum 1 acts_upstream_of_or_within
involved_in		 IGI
IMP
IBA		 (PMID:11756505)
(PMID:9412507)		 MGI
GO_Central		 PMID:9412507 PMID:11756505 GO_REF:0000033 NCBI chr 9:91,240,111...91,250,136
Ensembl chr 9:91,240,111...91,247,863 		JBrowse link
G Zic2 zinc finger protein of the cerebellum 2 involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:11756505) GO_Central
MGI		 PMID:11756505 GO_REF:0000033 NCBI chr14:122,712,796...122,717,740
Ensembl chr14:122,712,847...122,717,264 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
G Zic4 zinc finger protein of the cerebellum 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:91,247,636...91,271,404
Ensembl chr 9:91,244,466...91,271,401 		JBrowse link
G Zic5 zinc finger protein of the cerebellum 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:122,696,572...122,703,127
Ensembl chr14:122,694,207...122,703,089 		JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IMP (PMID:21533046) MGI PMID:21533046 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983 		JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 acts_upstream_of_or_within IMP (PMID:9140068) MGI PMID:9140068 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477 		JBrowse link
G Ghrh growth hormone releasing hormone acts_upstream_of_or_within IMP (PMID:15985453) MGI PMID:15985453 NCBI chr 2:157,171,416...157,190,645
Ensembl chr 2:157,171,417...157,189,426 		JBrowse link
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within IMP (PMID:1270792), (PMID:1329576), (PMID:1504465) MGI PMID:1270792 PMID:1329576 PMID:1504465 NCBI chr 6:55,353,204...55,365,515
Ensembl chr 6:55,353,280...55,365,515 		JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within IMP (PMID:8631293) MGI PMID:8631293 NCBI chr 5:147,125,492...147,127,753
Ensembl chr 5:147,125,506...147,127,757 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:18996108) MGI PMID:18996108 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Pou1f1 POU domain, class 1, transcription factor 1 involved_in ISO RGD
MGI		 PMID:16216912 GO_REF:0000096 MGI:4417868 RGD:1601440 NCBI chr16:65,317,398...65,331,904
Ensembl chr16:65,317,397...65,331,183 		JBrowse link
G Prop1 paired like homeodomain factor 1 acts_upstream_of_or_within IMP (PMID:18996108) MGI PMID:18996108 NCBI chr11:50,841,633...50,844,584
Ensembl chr11:50,841,633...50,844,592 		JBrowse link
G Slc6a3 solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 acts_upstream_of_or_within IMP (PMID:9247269) MGI PMID:9247269 NCBI chr13:73,684,270...73,726,791
Ensembl chr13:73,684,866...73,726,791 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within ISO
IMP		 (PMID:16932809) RGD
MGI		 PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 acts_upstream_of_or_within IMP (PMID:17440044) MGI PMID:17440044 NCBI chr 2:122,109,727...122,129,221
Ensembl chr 2:122,109,728...122,128,930 		JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor involved_in IMP (MGI:3821675|PMID:18778775) CACAO PMID:18778775 MGI:3821675 NCBI chr 4:107,659,337...107,734,037
Ensembl chr 4:107,659,066...107,734,037 		JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide acts_upstream_of_or_within IMP (MGI:2664023|PMID:12805306) ARUK-UCL PMID:12805306 MGI:2664023 NCBI chr 1:172,099,276...172,125,631
Ensembl chr 1:172,099,276...172,125,631 		JBrowse link
G Esr2 estrogen receptor 2 (beta) ISO RGD PMID:22791648 RGD:8694158 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IGI (PMID:25242307) MGI PMID:25242307 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:12527005) MGI PMID:12527005 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within IGI (PMID:25242307) MGI PMID:25242307 NCBI chr 7:97,437,748...97,561,588
Ensembl chr 7:97,437,748...97,561,588 		JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within IMP (PMID:24441682) MGI PMID:24441682 NCBI chr 2:61,633,228...61,644,458
Ensembl chr 2:61,633,274...61,644,458 		JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within IMP (PMID:23499007) MGI PMID:23499007 NCBI chr 5:86,258,579...86,320,602
Ensembl chr 5:86,257,146...86,320,662 		JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681 		JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IMP (MGI:5467661|PMID:23206892) UniProt PMID:23206892 MGI:5467661 NCBI chr 4:148,182,894...148,215,582
Ensembl chr 4:148,182,894...148,215,155 		JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within IMP (PMID:19398581) MGI PMID:19398581 NCBI chr16:32,048,930...32,065,843
Ensembl chr16:32,048,930...32,065,976 		JBrowse link
G Nfib nuclear factor I/B involved_in IMP (MGI:4453290|PMID:19961580) UniProt PMID:19961580 MGI:4453290 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:11997145) MGI PMID:11997145 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within IMP (PMID:15814794) MGI PMID:15814794 NCBI chr 6:32,121,478...32,565,127
Ensembl chr 6:32,121,203...32,565,127 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IMP (MGI:5467661|PMID:23206892)
(PMID:21055390)		 UniProt
MGI		 PMID:21055390 PMID:23206892 MGI:5467661 NCBI chr 7:97,999,875...98,010,602
Ensembl chr 7:97,999,875...98,010,535 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 3:108,498,302...108,553,035
Ensembl chr 3:108,498,595...108,553,035 		JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor involved_in ISO RGD
MGI		 PMID:12838511 GO_REF:0000096 MGI:4417868 RGD:1625689 NCBI chr10:75,152,711...75,170,626
Ensembl chr10:75,152,711...75,170,618 		JBrowse link
G Ager advanced glycosylation end product-specific receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:34,816,545...34,819,911
Ensembl chr17:34,816,836...34,819,910 		JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within IMP (PMID:9734405) MGI PMID:9734405 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G App amyloid beta precursor protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654 		JBrowse link
G Bace2 beta-site APP-cleaving enzyme 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chr16:97,157,928...97,244,136
Ensembl chr16:97,157,942...97,244,136 		JBrowse link
G C1qa complement component 1, q subcomponent, alpha polypeptide involved_in IGI (MGI:3607035|PMID:15269255) ARUK-UCL PMID:15269255 MGI:3607035 NCBI chr 4:136,623,227...136,626,155
Ensembl chr 4:136,623,228...136,626,114 		JBrowse link
G C5ar1 complement component 5a receptor 1 involved_in IGI (MGI:4354701|PMID:19561098) ARUK-UCL PMID:19561098 MGI:4354701 NCBI chr 7:15,980,668...15,993,465
Ensembl chr 7:15,980,668...15,993,465 		JBrowse link
G Cntf ciliary neurotrophic factor involved_in ISO
IBA		 spinal cord astrocytes RGD
GO_Central
MGI		 PMID:11771938 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1626172 NCBI chr19:12,740,892...12,742,996
Ensembl chr19:12,741,024...12,742,996 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO RGD
MGI		 PMID:16837601 GO_REF:0000096 MGI:4417868 RGD:1581900 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Ifng interferon gamma involved_in IGI
ISO		 (MGI:4454469|PMID:20368278) ARUK-UCL
MGI		 PMID:20368278 GO_REF:0000119 MGI:4454469 MGI:4834177 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797 		JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in IGI (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chr10:19,467,697...19,485,977
Ensembl chr10:19,467,697...19,485,977 		JBrowse link
G Il1b interleukin 1 beta acts_upstream_of_or_within IDA (PMID:28377412) MGI PMID:28377412 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059 		JBrowse link
G Mt2 metallothionein 2 ISO RGD PMID:19837066 RGD:6483825 NCBI chr 8:94,899,246...94,900,195
Ensembl chr 8:94,899,292...94,900,196 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:26607664) MGI PMID:26607664 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Psen1 presenilin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:23680462) MGI PMID:23680462 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IGI (MGI:6095556|PMID:29073081) ARUK-UCL PMID:29073081 MGI:6095556 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 involved_in ISO RGD
MGI		 PMID:34852714 GO_REF:0000096 MGI:4417868 RGD:155882542 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407 		JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654 		JBrowse link
G Grn granulin involved_in IMP (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chr11:102,321,333...102,327,635
Ensembl chr11:102,321,141...102,327,874 		JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in IGI (MGI:5465209|PMID:23152628) ARUK-UCL PMID:23152628 MGI:5465209 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017 		JBrowse link
G Psen1 presenilin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor acts_upstream_of_or_within IMP (PMID:22577135) MGI PMID:22577135 NCBI chr17:34,816,545...34,819,911
Ensembl chr17:34,816,836...34,819,910 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within IMP (PMID:17360497) MGI PMID:17360497 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724 		JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:20,317,544...20,328,073
Ensembl chr16:20,317,567...20,328,073 		JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within IGI (PMID:11487638) MGI PMID:11487638 NCBI chr11:102,778,162...102,791,368
Ensembl chr11:102,778,162...102,791,738 		JBrowse link
G Gm5849 predicted gene 5849 involved_in IBA GO_Central GO_REF:0000033 Ensembl chr 3:90,683,126...90,685,187 JBrowse link
G Lamb2 laminin, beta 2 acts_upstream_of_or_within IGI (PMID:19907020) MGI PMID:19907020 NCBI chr 9:108,357,080...108,367,729
Ensembl chr 9:108,356,935...108,367,729 		JBrowse link
G Lamc3 laminin gamma 3 acts_upstream_of_or_within IGI (PMID:19907020) MGI PMID:19907020 NCBI chr 2:31,777,293...31,839,095
Ensembl chr 2:31,777,303...31,836,551 		JBrowse link
G Plp1 proteolipid protein (myelin) 1 acts_upstream_of_or_within IGI (PMID:24038504) MGI PMID:24038504 NCBI chr  X:135,720,897...135,739,331
Ensembl chr  X:135,723,420...135,740,482 		JBrowse link
G Ror1 receptor tyrosine kinase-like orphan receptor 1 involved_in ISO RGD
MGI		 PMID:15095375 GO_REF:0000096 MGI:4417868 RGD:11537371 NCBI chr 4:99,952,988...100,302,003
Ensembl chr 4:99,952,988...100,301,962 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 involved_in ISO RGD
MGI		 PMID:15095375 GO_REF:0000096 MGI:4417868 RGD:11537371 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G S100a8 S100 calcium binding protein A8 (calgranulin A) acts_upstream_of_or_within IGI (PMID:22577135) MGI PMID:22577135 NCBI chr 3:90,576,378...90,577,341
Ensembl chr 3:90,576,285...90,577,342 		JBrowse link
G S100a9 S100 calcium binding protein A9 (calgranulin B) acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:22577135) MGI
GO_Central		 PMID:22577135 GO_REF:0000033 NCBI chr 3:90,599,937...90,603,028
Ensembl chr 3:90,599,939...90,603,028 		JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within IMP (PMID:22577135) MGI PMID:22577135 NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521 		JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within IGI
IMP		 (PMID:24038504) MGI PMID:24038504 NCBI chr 3:102,642,086...102,679,626
Ensembl chr 3:102,641,845...102,708,829 		JBrowse link
G Vim vimentin acts_upstream_of_or_within IGI (PMID:11487638) MGI PMID:11487638 NCBI chr 2:13,579,122...13,587,637
Ensembl chr 2:13,578,738...13,587,637 		JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP-binding cassette, sub-family C member 1 involved_in ISO RGD
MGI		 PMID:17141959 GO_REF:0000096 MGI:4417868 RGD:2303044 NCBI chr16:14,179,317...14,292,743
Ensembl chr16:14,179,422...14,293,601 		JBrowse link
G Actr3 ARP3 actin-related protein 3 involved_in ISO RGD
MGI		 PMID:23843614 GO_REF:0000096 MGI:4417868 RGD:8553949 NCBI chr 1:125,320,642...125,363,464
Ensembl chr 1:125,320,642...125,363,464 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of IDA
IGI		 (PMID:15882580) MGI PMID:15882580 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Cul4b cullin 4B involved_in IMP (PMID:26025376) MGI PMID:26025376 NCBI chr  X:37,620,493...37,665,073
Ensembl chr  X:37,622,151...37,665,073 		JBrowse link
G Dab1 disabled 1 acts_upstream_of IMP (PMID:18848628) MGI PMID:18848628 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:20,317,544...20,328,073
Ensembl chr16:20,317,567...20,328,073 		JBrowse link
G Eomes eomesodermin involved_in IMP (PMID:30186101) MGI PMID:30186101 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of IMP (PMID:12574417) MGI PMID:12574417 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within IMP (PMID:15234344) MGI PMID:15234344 NCBI chr16:42,068,915...42,161,014
Ensembl chr16:42,068,805...42,161,014 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IDA (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chr 9:44,247,645...44,255,525
Ensembl chr 9:44,247,636...44,255,525 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of IDA (PMID:18640244) MGI PMID:18640244 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of IMP (PMID:19109490) MGI PMID:19109490 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of IGI (PMID:15882580) MGI PMID:15882580 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP (PMID:16111892) MGI PMID:16111892 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Lif leukemia inhibitory factor involved_in ISO RGD
MGI		 PMID:17328769 GO_REF:0000096 MGI:4417868 RGD:2326156 NCBI chr11:4,207,587...4,222,514
Ensembl chr11:4,207,557...4,222,514 		JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within IMP (PMID:27654426) MGI PMID:27654426 NCBI chr 3:40,772,500...40,801,322
Ensembl chr 3:40,772,538...40,801,321 		JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of IDA (PMID:18640244) MGI PMID:18640244 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:12111813) MGI PMID:12111813 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of IMP (PMID:10442636), (PMID:9878702)
(PMID:11297510)		 MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within
involved_in		 IMP (PMID:21800304)
(PMID:29106906)		 MGI PMID:21800304 PMID:29106906 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Notch1 notch 1 involved_in ISO RGD
MGI		 PMID:19378247 GO_REF:0000096 MGI:4417868 RGD:2325301 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of IMP (PMID:14702088) MGI PMID:14702088 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IMP (PMID:29890290) MGI PMID:29890290 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:30186101)
(PMID:19258013)		 RGD
MGI		 PMID:19258013 PMID:22944581 PMID:30186101 GO_REF:0000096 MGI:4417868 RGD:8552357 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G S100b S100 protein, beta polypeptide, neural ISO RGD PMID:19147496 RGD:5508832 NCBI chr10:76,089,670...76,097,153
Ensembl chr10:76,089,687...76,096,993 		JBrowse link
G Shh sonic hedgehog acts_upstream_of IMP (PMID:10357934) MGI PMID:10357934 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in ISO RGD
MGI		 PMID:15846364 GO_REF:0000096 MGI:4417868 RGD:1581115 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in IMP (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366 		JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within IMP (PMID:15590934) MGI PMID:15590934 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488 		JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (PMID:29890290) MGI PMID:29890290 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136 		JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing homolog 1 acts_upstream_of_or_within IDA (PMID:14573516) MGI PMID:14573516 NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906 		JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 acts_upstream_of_or_within IGI (PMID:19490914) MGI PMID:19490914 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IGI (PMID:19490914) MGI PMID:19490914 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 acts_upstream_of_or_within IMP (PMID:16292311) MGI PMID:16292311 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952 		JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:20980600) MGI PMID:20980600 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:20980600) MGI PMID:20980600 NCBI chr 1:156,386,160...156,477,189
Ensembl chr 1:156,386,356...156,477,138 		JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within IMP (PMID:10816608) MGI PMID:10816608 NCBI chr11:102,778,162...102,791,368
Ensembl chr11:102,778,162...102,791,738 		JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 acts_upstream_of IMP (PMID:24062445) MGI PMID:24062445 NCBI chr 1:135,087,988...135,095,419
Ensembl chr 1:135,087,972...135,095,419 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IGI (PMID:24431450) MGI PMID:24431450 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IGI (PMID:24431450) MGI PMID:24431450 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IGI (PMID:24431450) MGI PMID:24431450 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991 		JBrowse link
G Plpp3 phospholipid phosphatase 3 acts_upstream_of_or_within IMP (PMID:21319224) MGI PMID:21319224 NCBI chr 4:105,014,544...105,089,964
Ensembl chr 4:105,014,544...105,089,961 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within IGI
IMP		 (PMID:24431450) MGI PMID:24431450 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:10375501) MGI PMID:10375501 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within IMP (PMID:29615573) MGI PMID:29615573 NCBI chr 2:66,014,131...66,087,144
Ensembl chr 2:66,014,671...66,086,961 		JBrowse link
G Vim vimentin acts_upstream_of_or_within IMP (PMID:10816608) MGI PMID:10816608 NCBI chr 2:13,579,122...13,587,637
Ensembl chr 2:13,578,738...13,587,637 		JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis-associated tyrosine kinase acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:22573681) MGI
GO_Central		 PMID:22573681 GO_REF:0000033 NCBI chr11:119,898,137...119,938,009
Ensembl chr11:119,898,139...119,937,993 		JBrowse link
G Abcb6 ATP-binding cassette, sub-family B member 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:75,148,284...75,157,066
Ensembl chr 1:75,148,361...75,157,036 		JBrowse link
G Abr active BCR-related gene acts_upstream_of_or_within IGI (PMID:11684658) MGI PMID:11684658 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384 		JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:95,701,321...95,740,836
Ensembl chr 8:95,701,379...95,740,845 		JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:37,474,052...37,633,245
Ensembl chr 3:37,474,045...37,633,245 		JBrowse link
G Aim2 absent in melanoma 2 involved_in IDA (PMID:32350463) UniProt PMID:32350463 NCBI chr 1:173,177,105...173,293,606
Ensembl chr 1:173,178,445...173,293,606 		JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within IMP (PMID:18776131)
(PMID:21746835)		 MGI PMID:18776131 PMID:21746835 NCBI chr12:105,670,115...105,748,706
Ensembl chr12:105,672,235...105,748,706 		JBrowse link
G Alk anaplastic lymphoma kinase acts_upstream_of_or_within IMP (PMID:17487225) MGI PMID:17487225 NCBI chr17:72,174,206...72,911,719
Ensembl chr17:72,175,967...72,911,622 		JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:108,093,605...108,099,602
Ensembl chr 3:108,093,651...108,099,602 		JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:97,141,955...97,145,168
Ensembl chr15:97,142,006...97,145,168 		JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:107,930,358...107,932,900
Ensembl chr 9:107,930,358...107,932,900 		JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:122,559,646...122,582,978
Ensembl chr 5:122,559,756...122,582,975 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within IMP (PMID:9753321) MGI PMID:9753321 NCBI chr10:90,825,173...90,918,688
Ensembl chr10:90,825,173...90,918,632 		JBrowse link
G Apod apolipoprotein D involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:31,115,010...31,133,626
Ensembl chr16:31,115,010...31,133,626 		JBrowse link
G Arl6 ADP-ribosylation factor-like 6 acts_upstream_of_or_within IMP (PMID:22139371) MGI PMID:22139371 NCBI chr16:59,433,312...59,459,772
Ensembl chr16:59,433,312...59,459,754 		JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:83,895,486...84,059,201
Ensembl chr 7:83,895,486...84,059,384 		JBrowse link
G Aspm abnormal spindle microtubule assembly acts_upstream_of_or_within IMP (PMID:20823249) MGI PMID:20823249 NCBI chr 1:139,381,450...139,421,826
Ensembl chr 1:139,382,510...139,421,829 		JBrowse link
G Atm ataxia telangiectasia mutated acts_upstream_of_or_within IGI (PMID:16687486) MGI PMID:16687486 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:12223565) MGI PMID:12223565 NCBI chr 6:64,706,109...64,708,229
Ensembl chr 6:64,706,109...64,708,229 		JBrowse link
G Atxn1 ataxin 1 involved_in IMP (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr13:45,703,231...46,118,467
Ensembl chr13:45,703,231...46,118,484 		JBrowse link
G Atxn1l ataxin 1-like involved_in IMP (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr 8:110,453,083...110,464,426
Ensembl chr 8:110,453,083...110,464,371 		JBrowse link
G B3glct beta-3-glucosyltransferase acts_upstream_of_or_within IMP (PMID:31600785) MGI PMID:31600785 NCBI chr 5:149,601,565...149,686,064
Ensembl chr 5:149,601,695...149,686,064 		JBrowse link
G B4galt2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 acts_upstream_of_or_within IMP (PMID:19265195) MGI PMID:19265195 NCBI chr 4:117,730,211...117,740,724
Ensembl chr 4:117,726,457...117,740,684 		JBrowse link
G Bag6 BCL2-associated athanogene 6 involved_in IMP (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chr17:35,354,132...35,366,297
Ensembl chr17:35,354,154...35,366,298 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within IGI (PMID:22228099) MGI PMID:22228099 NCBI chr 3:36,627,291...36,667,639
Ensembl chr 3:36,627,291...36,667,626 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within IGI (PMID:11684658) MGI PMID:11684658 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753 		JBrowse link
G Bglap bone gamma carboxyglutamate protein involved_in IMP
IDA		 (MGI:5544381|PMID:24074871)
(PMID:24074871)		 UniProt PMID:24074871 MGI:5544381 NCBI chr 3:88,290,802...88,291,773
Ensembl chr 3:88,290,808...88,291,771 		JBrowse link
G Bglap2 bone gamma-carboxyglutamate protein 2 involved_in IMP (MGI:5544381|PMID:24074871) UniProt PMID:24074871 MGI:5544381 NCBI chr 3:88,285,043...88,286,008
Ensembl chr 3:88,285,043...88,286,006 		JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene acts_upstream_of_or_within IMP (PMID:7926765) MGI PMID:7926765 NCBI chr 2:18,681,953...18,691,440
Ensembl chr 2:18,681,829...18,691,440 		JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in NAS
ISO		 (MGI:3690152|PMID:14609955) ComplexPortal
MGI		 PMID:14609955 GO_REF:0000119 MGI:3690152 MGI:4834177 NCBI chr11:106,923,907...107,022,982
Ensembl chr11:106,923,907...107,022,953 		JBrowse link
G Brca2 breast cancer 2, early onset acts_upstream_of_or_within IMP (PMID:17476307) MGI PMID:17476307 NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794 		JBrowse link
G Brinp1 bone morphogenic protein/retinoic acid inducible neural specific 1 involved_in IMP (MGI:5770105|PMID:27042284) UniProt PMID:27042284 MGI:5770105 NCBI chr 4:68,679,609...68,872,634
Ensembl chr 4:68,679,751...68,872,634 		JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (PMID:19004860) MGI PMID:19004860 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359 		JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in IMP (MGI:6739960|PMID:34298015) UniProt PMID:34298015 MGI:6739960 NCBI chr 2:76,840,246...77,006,424
Ensembl chr 2:76,840,246...77,000,980 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 acts_upstream_of_or_within IMP (PMID:29317443) MGI PMID:29317443 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 involved_in IMP
IBA		 (MGI:1347398|PMID:10545161) UniProt
GO_Central		 PMID:10545161 GO_REF:0000033 MGI:1347398 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010 		JBrowse link
G Cdk5r2 cyclin dependent kinase 5, regulatory subunit 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:74,894,188...74,896,891
Ensembl chr 1:74,894,093...74,896,891 		JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IMP (MGI:4454588|PMID:20460369) UniProt PMID:20460369 MGI:4454588 NCBI chr 4:70,135,092...70,328,672
Ensembl chr 4:70,135,093...70,328,680 		JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within IMP (PMID:15248193) MGI PMID:15248193 NCBI chr 8:70,768,425...70,784,238
Ensembl chr 8:70,768,425...70,784,242 		JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within IMP (PMID:31004071) MGI PMID:31004071 NCBI chr19:47,723,706...47,825,893
Ensembl chr19:47,725,296...47,907,726 		JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:27602517) MGI
GO_Central		 PMID:27602517 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:52,435,608...52,495,499
Ensembl chr14:52,435,608...52,495,237 		JBrowse link
G Cic capicua transcriptional repressor involved_in IMP (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr 7:24,967,054...24,993,584
Ensembl chr 7:24,967,129...24,993,584 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in IEP (MGI:3693257|PMID:17047318) UniProt PMID:17047318 MGI:3693257 NCBI chr  X:101,290,984...101,295,787
Ensembl chr  X:101,290,987...101,295,787 		JBrowse link
G Cln5 ceroid-lipofuscinosis, neuronal 5 involved_in ISO (PMID:10992246) UniProt PMID:10992246 NCBI chr14:103,307,679...103,315,064
Ensembl chr14:103,307,652...103,315,064 		JBrowse link
G Cntn1 contactin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:91,949,034...92,239,834
Ensembl chr15:91,949,046...92,239,848 		JBrowse link
G Cntn2 contactin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:132,437,163...132,470,989
Ensembl chr 1:132,437,165...132,470,994 		JBrowse link
G Cntn4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chr 6:105,654,505...106,677,102
Ensembl chr 6:105,654,621...106,676,271 		JBrowse link
G Col4a1 collagen, type IV, alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:11,248,423...11,362,889
Ensembl chr 8:11,248,423...11,362,826 		JBrowse link
G Ctns cystinosis, nephropathic involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:73,073,959...73,089,869
Ensembl chr11:73,074,422...73,089,868 		JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within IMP (PMID:33459505) MGI PMID:33459505 NCBI chr 5:73,563,394...73,610,778
Ensembl chr 5:73,563,418...73,610,778 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IMP (MGI:5287328|PMID:21778362) UniProt PMID:21778362 MGI:5287328 NCBI chr 9:119,877,749...119,897,362
Ensembl chr 9:119,877,749...119,898,945 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within IDA (PMID:12183377) MGI PMID:12183377 NCBI chr 6:117,145,496...117,158,329
Ensembl chr 6:117,145,496...117,158,328 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:12183377) GO_Central
MGI		 PMID:12183377 GO_REF:0000033 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030 		JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within IGI (PMID:16387638) MGI PMID:16387638 NCBI chr 3:55,149,724...55,446,489
Ensembl chr 3:55,149,785...55,446,489 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IGI (PMID:16387638) MGI PMID:16387638 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307 		JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:59,785,497...59,787,592
Ensembl chr10:59,785,491...59,787,656 		JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:125,490,811...125,511,203
Ensembl chr 5:125,490,922...125,511,185 		JBrowse link
G Diaph1 diaphanous related formin 1 involved_in IMP (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chr18:37,976,654...38,068,573
Ensembl chr18:37,976,654...38,068,529 		JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in IEP (MGI:3054504|PMID:15314164) UniProt PMID:15314164 MGI:3054504 NCBI chr 4:115,772,316...115,797,794
Ensembl chr 4:115,772,316...115,797,123 		JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 9:54,272,442...54,409,150
Ensembl chr 9:54,272,442...54,408,910 		JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IMP (MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:6245118 NCBI chr 5:135,093,060...135,094,219
Ensembl chr 5:135,093,056...135,094,716 		JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:45,338,735...45,665,011
Ensembl chr 9:45,337,926...45,665,010 		JBrowse link
G Eml1 echinoderm microtubule associated protein like 1 involved_in IMP
ISO		 (MGI:5574528|PMID:24859200) UniProt
MGI		 PMID:24859200 GO_REF:0000119 MGI:4834177 MGI:5574528 NCBI chr12:108,337,265...108,505,835
Ensembl chr12:108,337,216...108,505,876 		JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:12091317)
(PMID:12561075)		 GO_Central
MGI		 PMID:12091317 PMID:12561075 GO_REF:0000033 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:12196586), (PMID:12209834), (PMID:12561075)
(PMID:12091317)		 MGI
GO_Central		 PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000033 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Eomes eomesodermin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200 		JBrowse link
G Epha7 Eph receptor A7 involved_in IMP (MGI:3582020|PMID:15902206) UniProt PMID:15902206 MGI:3582020 NCBI chr 4:28,811,840...28,969,391
Ensembl chr 4:28,813,131...28,967,499 		JBrowse link
G Epor erythropoietin receptor acts_upstream_of_or_within IMP (PMID:11807041) MGI PMID:11807041 NCBI chr 9:21,870,193...21,874,915
Ensembl chr 9:21,870,193...21,874,802 		JBrowse link
G Esr2 estrogen receptor 2 (beta) acts_upstream_of_or_within IMP (PMID:12515851) MGI PMID:12515851 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect		 IMP (PMID:14605369) MGI PMID:14605369 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:12682014) MGI PMID:12682014 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:23591631)
(PMID:20675713)
(PMID:26306834)		 MGI PMID:20675713 PMID:23591631 PMID:26306834 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within IDA
IMP		 (PMID:29360985) MGI PMID:29360985 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890 		JBrowse link
G Flvcr2 feline leukemia virus subgroup C cellular receptor 2 acts_upstream_of_or_within IMP (PMID:32369453) MGI PMID:32369453 NCBI chr12:85,793,313...85,860,359
Ensembl chr12:85,793,313...85,860,359 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within IMP (PMID:4784576), (PMID:5500588)
(PMID:9635428)		 MGI PMID:4784576 PMID:5500588 PMID:9635428 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxj1 forkhead box J1 involved_in IEP (MGI:86662|PMID:9096351) BHF-UCL PMID:9096351 MGI:86662 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225 		JBrowse link
G Foxr1 forkhead box R1 involved_in IMP (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chr 9:44,345,531...44,352,165
Ensembl chr 9:44,345,070...44,352,433 		JBrowse link
G Gabrb3 GABRB3, gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within IMP (PMID:16168624) MGI PMID:16168624 NCBI chr 7:57,240,266...57,478,550
Ensembl chr 7:57,069,440...57,478,550 		JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within IMP (PMID:27472056) MGI PMID:27472056 NCBI chr 8:124,245,630...124,263,394
Ensembl chr 8:124,245,573...124,263,389 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in IMP
IBA		 (MGI:6478058|PMID:25792865) UniProt
GO_Central		 PMID:25792865 GO_REF:0000033 MGI:6478058 NCBI chr11:77,384,114...77,398,600
Ensembl chr11:77,384,388...77,398,612 		JBrowse link
G Git2 GIT ArfGAP 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:114,865,469...114,912,647
Ensembl chr 5:114,865,468...114,913,578 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:12435361), (PMID:17395647)
(PMID:8026071)		 MGI PMID:8026071 PMID:12435361 PMID:17395647 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in IDA (PMID:28851741) UniProt PMID:28851741 NCBI chr 2:21,372,378...21,835,355
Ensembl chr 2:21,372,353...21,835,358 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:21377456) MGI
GO_Central		 PMID:21377456 GO_REF:0000033 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IGI (PMID:12930780) MGI PMID:12930780 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 9:66,257,694...66,416,057
Ensembl chr 9:66,257,732...66,416,057 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IMP (MGI:3703278|PMID:17331197) UniProt PMID:17331197 MGI:3703278 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP (PMID:11291863) MGI PMID:11291863 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286 		JBrowse link
G Hmx2 H6 homeobox 2 acts_upstream_of_or_within IGI (PMID:15363417) MGI PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743 		JBrowse link
G Hmx3 H6 homeobox 3 acts_upstream_of_or_within IGI (PMID:15363417) MGI PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654 		JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in IMP (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chr 1:169,777,109...169,796,757
Ensembl chr 1:169,777,104...169,796,810 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) acts_upstream_of_or_within IMP (PMID:10579729) MGI PMID:10579729 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within IMP (PMID:16978870) MGI PMID:16978870 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878 		JBrowse link
G Hydin HYDIN, axonemal central pair apparatus protein acts_upstream_of_or_within IMP (PMID:26234751) MGI PMID:26234751 MGI:71926 NCBI chr 8:110,993,600...111,336,885
Ensembl chr 8:110,993,609...111,336,885 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:15469968) MGI PMID:15469968 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:77,017,723...77,029,310
Ensembl chr18:77,017,713...77,029,308 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:18930042) MGI PMID:18930042 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP
IGI		 (PMID:19036983)
(PMID:22228099)		 MGI PMID:19036983 PMID:22228099 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Igf1r insulin-like growth factor I receptor acts_upstream_of_or_within IMP (PMID:12904469) MGI PMID:12904469 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416 		JBrowse link
G Immp2l IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) acts_upstream_of_or_within IMP (PMID:21824519) MGI PMID:21824519 NCBI chr12:41,074,060...42,002,371
Ensembl chr12:41,074,089...42,002,371 		JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within IMP (PMID:12904469) MGI PMID:12904469 NCBI chr 8:11,034,681...11,058,929
Ensembl chr 8:11,034,681...11,058,458 		JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:23906841) GO_Central
MGI		 PMID:23906841 GO_REF:0000033 NCBI chr 9:40,806,147...40,877,560
Ensembl chr 9:40,806,145...40,875,414 		JBrowse link
G Kcna1 potassium voltage-gated channel, shaker-related subfamily, member 1 involved_in IMP (MGI:5297001|PMID:21966978) UniProt PMID:21966978 MGI:5297001 NCBI chr 6:126,613,426...126,622,764
Ensembl chr 6:126,617,360...126,623,347 		JBrowse link
G Kcnq2 potassium voltage-gated channel, subfamily Q, member 2 acts_upstream_of_or_within IMP (PMID:30382937) MGI PMID:30382937 NCBI chr 2:180,717,372...180,777,368
Ensembl chr 2:180,717,372...180,777,093 		JBrowse link
G Kdm4b lysine (K)-specific demethylase 4B involved_in IMP (MGI:6101669|PMID:27023172) UniProt PMID:27023172 MGI:6101669 NCBI chr17:56,632,975...56,710,774
Ensembl chr17:56,633,062...56,709,870 		JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 1:136,059,128...136,105,739
Ensembl chr 1:136,059,127...136,105,736 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP
IDA		 (PMID:26306834), (PMID:29360985)
(PMID:29360985)		 MGI PMID:26306834 PMID:29360985 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Lhx2 LIM homeobox protein 2 acts_upstream_of_or_within IMP (PMID:14566948), (PMID:15295034) MGI PMID:14566948 PMID:15295034 NCBI chr 2:38,229,282...38,259,747
Ensembl chr 2:38,229,293...38,259,745 		JBrowse link
G Llgl1 LLGL1 scribble cell polarity complex component involved_in TAS (MGI:78468|PMID:8565641) UniProt PMID:8565641 MGI:78468 NCBI chr11:60,590,501...60,605,012
Ensembl chr11:60,590,549...60,605,012 		JBrowse link
G Maco1 macoilin 1 involved_in IEP (MGI:3052424|PMID:15255972) BHF-UCL PMID:15255972 MGI:3052424 NCBI chr 4:134,530,070...134,581,242
Ensembl chr 4:134,530,070...134,580,656 		JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in IEP (MGI:4887328|PMID:17586838) UniProt PMID:17586838 MGI:4887328 NCBI chr 2:140,237,223...142,234,886
Ensembl chr 2:140,237,229...142,234,886 		JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:61,574,419...61,620,383
Ensembl chr10:61,574,444...61,619,926 		JBrowse link
G Map1s microtubule-associated protein 1S involved_in IEP (MGI:3529608|PMID:15528209) HGNC-UCL PMID:15528209 MGI:3529608 NCBI chr 8:71,358,618...71,370,173
Ensembl chr 8:71,358,576...71,370,173 		JBrowse link
G Mast1 microtubule associated serine/threonine kinase 1 involved_in IMP
ISO		 (MGI:6269299|PMID:30449657) UniProt
MGI		 PMID:30449657 GO_REF:0000119 MGI:4834177 MGI:6269299 NCBI chr 8:85,638,482...85,672,811
Ensembl chr 8:85,638,532...85,663,988 		JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in IMP (MGI:7285999|PMID:35482892) UniProt PMID:35482892 MGI:7285999 NCBI chr 8:106,007,041...106,016,160
Ensembl chr 8:106,007,041...106,016,496 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr17:30,046,930...30,107,557
Ensembl chr17:30,046,923...30,189,061 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IMP (PMID:18571096) MGI PMID:18571096 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:10882104) MGI PMID:10882104 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Meis1 Meis homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:18,830,428...18,968,992
Ensembl chr11:18,829,817...18,968,985 		JBrowse link
G Meis2 Meis homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:115,691,745...115,897,925
Ensembl chr 2:115,693,545...115,896,320 		JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:15,908,684...15,920,435
Ensembl chr 7:15,909,015...15,920,429 		JBrowse link
G Met met proto-oncogene acts_upstream_of_or_within IMP (PMID:12397180) MGI PMID:12397180 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of
acts_upstream_of_or_within		 IMP
ISO		 (MGI:6196220|PMID:30074985) ARUK-UCL
MGI		 PMID:30074985 GO_REF:0000119 MGI:4834177 MGI:6196220 NCBI chr 4:122,840,643...122,855,844
Ensembl chr 4:122,840,643...122,854,981 		JBrowse link
G Mink1 misshapen-like kinase 1 (zebrafish) involved_in IEP (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chr11:70,452,272...70,505,309
Ensembl chr11:70,453,707...70,505,309 		JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle acts_upstream_of_or_within IMP (PMID:16481398) MGI PMID:16481398 NCBI chr11:68,581,228...68,707,451
Ensembl chr11:68,582,385...68,707,458 		JBrowse link
G Napa N-ethylmaleimide sensitive fusion protein attachment protein alpha acts_upstream_of_or_within IMP (PMID:11706940) MGI PMID:11706940 NCBI chr 7:15,832,127...15,851,907
Ensembl chr 7:15,832,383...15,851,900 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within IMP (PMID:12556486) MGI PMID:12556486 NCBI chr 2:155,232,585...155,315,741
Ensembl chr 2:155,232,576...155,315,814 		JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase core subunit S4 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:28916769) MGI PMID:28916769 GO_REF:0000119 MGI:4834177 NCBI chr13:114,424,331...114,524,630
Ensembl chr13:114,424,331...114,524,794 		JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within IMP (PMID:30932003) MGI PMID:30932003 NCBI chr 3:156,266,082...157,022,101
Ensembl chr 3:156,267,431...157,022,082 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:10419687) MGI PMID:10419687 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nf2 neurofibromin 2 acts_upstream_of_or_within IMP (PMID:23863479) MGI PMID:23863479 NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536 		JBrowse link
G Nfasc neurofascin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:132,492,428...132,669,567
Ensembl chr 1:132,492,428...132,669,535 		JBrowse link
G Nfib nuclear factor I/B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:18477394), (PMID:23964093)
(PMID:17353270)		 MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 ISO
IGI
IMP		 (PMID:12930780)
(PMID:8557195)		 MGI PMID:8557195 PMID:12930780 GO_REF:0000119 MGI:4834177 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 1:164,135,091...164,264,870
Ensembl chr 1:164,131,690...164,265,294 		JBrowse link
G Nnat neuronatin involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:157,401,936...157,404,445
Ensembl chr 2:157,401,998...157,404,442 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IMP (PMID:11311163) MGI PMID:11311163 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:12397106) MGI PMID:12397106 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:14994267) MGI PMID:14994267 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within IMP (PMID:10195193) MGI PMID:10195193 NCBI chr 6:126,078,375...126,143,703
Ensembl chr 6:126,078,375...126,143,873 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IMP (PMID:31383820) MGI PMID:31383820 NCBI chr 9:21,901,167...21,914,268
Ensembl chr 9:21,901,167...21,913,930 		JBrowse link
G Odad4 outer dynein arm complex subunit 4 acts_upstream_of
acts_upstream_of_or_within		 IMP (PMID:27486780) MGI PMID:27486780 NCBI chr11:100,436,434...100,463,392
Ensembl chr11:100,436,433...100,463,394 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:10409504), (PMID:12196586) MGI PMID:10409504 PMID:12196586 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Pbx2 pre B cell leukemia homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:34,811,233...34,816,374
Ensembl chr17:34,810,240...34,816,374 		JBrowse link
G Pbx3 pre B cell leukemia homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:34,061,469...34,264,168
Ensembl chr 2:34,061,469...34,263,154 		JBrowse link
G Pbx4 pre B cell leukemia homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,285,127...70,324,942
Ensembl chr 8:70,285,141...70,324,942 		JBrowse link
G Pcdh18 protocadherin 18 involved_in IEP (MGI:2154581|PMID:11716507) UniProt PMID:11716507 MGI:2154581 NCBI chr 3:49,697,745...49,711,723
Ensembl chr 3:49,697,745...49,711,774 		JBrowse link
G Plcb1 phospholipase C, beta 1 involved_in NAS (MGI:4943665|PMID:18493969) BHF-UCL PMID:18493969 MGI:4943665 NCBI chr 2:134,628,084...135,317,178
Ensembl chr 2:134,627,987...135,317,178 		JBrowse link
G Plxnb2 plexin B2 involved_in IMP (MGI:3712712|PMID:17554007) UniProt PMID:17554007 MGI:3712712 NCBI chr15:89,039,752...89,064,960
Ensembl chr15:89,039,752...89,064,991 		JBrowse link
G Pomgnt1 protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase acts_upstream_of_or_within IMP (PMID:26306834) MGI PMID:26306834 NCBI chr 4:116,007,700...116,017,041
Ensembl chr 4:115,981,037...116,017,046 		JBrowse link
G Pomk protein-O-mannose kinase acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 8:26,470,632...26,484,149
Ensembl chr 8:26,470,632...26,484,161 		JBrowse link
G Pou3f1 POU domain, class 3, transcription factor 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:124,551,439...124,554,448
Ensembl chr 4:124,550,600...124,554,448 		JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366 		JBrowse link
G Pou3f3 POU domain, class 3, transcription factor 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:42,734,928...42,739,370
Ensembl chr 1:42,734,085...42,742,336 		JBrowse link
G Pou3f4 POU domain, class 3, transcription factor 4 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr  X:109,857,985...109,862,714
Ensembl chr  X:109,857,886...109,860,813 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:122,729,879...122,752,968
Ensembl chr 4:122,730,035...122,752,968 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide acts_upstream_of_or_within IGI (PMID:16687486) MGI PMID:16687486 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) BHF-UCL PMID:8812486 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IMP (PMID:9153393) MGI PMID:9153393 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Ptch1 patched 1 involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460 		JBrowse link
G Pygo2 pygopus 2 acts_upstream_of_or_within IMP (PMID:17425782) MGI PMID:17425782 NCBI chr 3:89,337,521...89,342,438
Ensembl chr 3:89,337,521...89,342,435 		JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:108,385,204...108,393,140
Ensembl chr 9:108,384,905...108,393,140 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:127,796,492...127,871,612
Ensembl chr 1:127,796,510...127,871,605 		JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within IMP (PMID:15789424) MGI PMID:15789424 NCBI chr18:66,067,710...66,072,160
Ensembl chr18:66,061,348...66,072,858 		JBrowse link
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor involved_in NAS (MGI:3690152|PMID:14609955) ComplexPortal PMID:14609955 MGI:3690152 NCBI chr 4:129,200,893...129,229,163
Ensembl chr 4:129,200,893...129,229,163 		JBrowse link
G Rbbp7 retinoblastoma binding protein 7, chromatin remodeling factor involved_in NAS (MGI:3690152|PMID:14609955) ComplexPortal PMID:14609955 MGI:3690152 NCBI chr  X:161,543,368...161,562,086
Ensembl chr  X:161,543,398...161,562,088 		JBrowse link
G Reln reelin acts_upstream_of_or_within IMP (PMID:12223565) MGI PMID:12223565 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,889,765 		JBrowse link
G Rogdi rogdi homolog involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:38172607) MGI PMID:38172607 GO_REF:0000119 MGI:4834177 NCBI chr16:4,826,593...4,831,438
Ensembl chr16:4,826,594...4,831,417 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17553904), (PMID:17558409) MGI PMID:17553904 PMID:17558409 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Rtn1 reticulon 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:72,258,523...72,455,828
Ensembl chr12:72,258,526...72,455,828 		JBrowse link
G Rtn3 reticulon 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:7,403,260...7,460,656
Ensembl chr19:7,403,266...7,460,646 		JBrowse link
G Rtn4 reticulon 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within IMP (PMID:16314531) MGI PMID:16314531 NCBI chr 3:115,504,082...115,508,704
Ensembl chr 3:115,504,082...115,508,721 		JBrowse link
G Sct secretin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:140,858,243...140,859,082
Ensembl chr 7:140,858,243...140,859,046 		JBrowse link
G Scyl2 SCY1-like 2 (S. cerevisiae) involved_in IDA (MGI:5694521|PMID:26203146) UniProt PMID:26203146 MGI:5694521 NCBI chr10:89,474,582...89,522,179
Ensembl chr10:89,474,583...89,522,147 		JBrowse link
G Selenop selenoprotein P acts_upstream_of_or_within IMP (PMID:14704310) MGI PMID:14704310 NCBI chr15:3,300,249...3,309,992
Ensembl chr15:3,298,029...3,309,990 		JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within IMP (PMID:16314519) MGI PMID:16314519 NCBI chr11:87,457,515...87,481,365
Ensembl chr11:87,457,479...87,481,365 		JBrowse link
G Setd1a SET domain containing 1A involved_in IMP
ISO		 (MGI:6467717|PMID:31197650) UniProt
MGI		 PMID:31197650 GO_REF:0000119 MGI:4834177 MGI:6467717 NCBI chr 7:127,376,561...127,399,294
Ensembl chr 7:127,375,842...127,399,294 		JBrowse link
G Shroom2 shroom family member 2 involved_in ISS (MGI:3710716|PMID:16987870) UniProt PMID:16987870 MGI:3710716 NCBI chr  X:151,392,505...151,553,784
Ensembl chr  X:151,392,505...151,552,461 		JBrowse link
G Shroom4 shroom family member 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:6,312,012...6,549,508
Ensembl chr  X:6,311,908...6,549,502 		JBrowse link
G Six3 sine oculis-related homeobox 3 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:12569128) GO_Central
MGI		 PMID:12569128 GO_REF:0000033 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Slc1a1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 involved_in IMP (PMID:28886095) MGI PMID:28886095 NCBI chr19:28,812,535...28,891,360
Ensembl chr19:28,812,449...28,891,360 		JBrowse link
G Slc23a1 solute carrier family 23 (nucleobase transporters), member 1 involved_in IMP (MGI:2178849|PMID:11984597) UniProt PMID:11984597 MGI:2178849 NCBI chr18:35,747,657...35,762,900
Ensembl chr18:35,747,657...35,760,297 		JBrowse link
G Slc6a17 solute carrier family 6 (neurotransmitter transporter), member 17 involved_in IDA (MGI:5634854|PMID:25704603) UniProt PMID:25704603 MGI:5634854 NCBI chr 3:107,374,864...107,425,334
Ensembl chr 3:107,374,859...107,425,334 		JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (PMID:17035536) MGI PMID:17035536 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063 		JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within		 NAS
IMP
ISO		 (MGI:3690152|PMID:14609955)
(PMID:22516202)		 ComplexPortal
MGI		 PMID:14609955 PMID:22516202 GO_REF:0000119 MGI:3690152 MGI:4834177 NCBI chr  X:46,898,247...46,981,490
Ensembl chr  X:46,898,245...46,981,851 		JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in IMP (MGI:5775676|PMID:27018474) UniProt PMID:27018474 MGI:5775676 NCBI chr 7:24,099,106...24,122,197
Ensembl chr 7:24,099,044...24,122,203 		JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:12,445,519...12,449,555
Ensembl chr 8:12,445,295...12,450,126 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Sox12 SRY (sex determining region Y)-box 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:152,235,531...152,239,966
Ensembl chr 2:152,235,531...152,239,983 		JBrowse link
G Sox14 SRY (sex determining region Y)-box 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:99,756,159...99,758,223
Ensembl chr 9:99,756,159...99,758,223 		JBrowse link
G Sox15 SRY (sex determining region Y)-box 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:69,545,863...69,547,553
Ensembl chr11:69,546,140...69,547,553 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Sox21 SRY (sex determining region Y)-box 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:118,470,645...118,474,442
Ensembl chr14:118,470,644...118,474,442 		JBrowse link
G Sox3 SRY (sex determining region Y)-box 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:59,934,972...59,937,045
Ensembl chr  X:59,934,972...59,937,036 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031 		JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within IGI (PMID:16314531) MGI PMID:16314531 NCBI chr11:116,421,662...116,427,502
Ensembl chr11:116,421,751...116,427,501 		JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within IGI (PMID:16314531) MGI PMID:16314531 NCBI chr 7:45,358,887...45,367,426
Ensembl chr 7:45,358,891...45,367,426 		JBrowse link
G Sry sex determining region of Chr Y involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:2,662,471...2,663,658
Ensembl chr  Y:2,662,471...2,663,658 		JBrowse link
G Stk36 serine/threonine kinase 36 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 1:74,640,583...74,676,053
Ensembl chr 1:74,640,604...74,676,053 		JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within IMP (PMID:15690082) MGI PMID:15690082 NCBI chr 3:108,700,496...108,747,818
Ensembl chr 3:108,700,492...108,747,842 		JBrowse link
G Svbp small vasohibin binding protein involved_in IMP (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chr 4:119,052,507...119,058,495
Ensembl chr 4:119,052,503...119,058,495 		JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:56,989,225...57,051,891
Ensembl chr16:56,989,225...57,051,867 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:2678274|PMID:12975342) BHF-UCL PMID:12975342 MGI:2678274 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tmx2 thioredoxin-related transmembrane protein 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:84,501,655...84,509,172
Ensembl chr 2:84,501,660...84,509,484 		JBrowse link
G Tubgcp2 tubulin, gamma complex component 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:139,575,868...139,616,587
Ensembl chr 7:139,575,868...139,616,582 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:11406614), (PMID:19286674) MGI PMID:11406614 PMID:19286674 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:171,116,137...171,122,575
Ensembl chr 1:171,116,136...171,122,597 		JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:53,760,797...53,771,228
Ensembl chr 3:53,760,797...53,771,251 		JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:21,271,126...21,321,267
Ensembl chr11:21,271,138...21,321,201 		JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:27445138) MGI PMID:27445138 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within IMP (PMID:9126743)
(PMID:10818148)
(PMID:1401878), (PMID:9550145)		 MGI PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 NCBI chr 3:141,171,360...141,540,685
Ensembl chr 3:141,170,977...141,540,685 		JBrowse link
G Upf3b UPF3 regulator of nonsense transcripts homolog B (yeast) acts_upstream_of IMP (PMID:23821644) MGI PMID:23821644 NCBI chr  X:36,355,331...36,374,124
Ensembl chr  X:36,355,331...36,373,975 		JBrowse link
G Utp3 UTP3 small subunit processome component involved_in IDA (MGI:2136064|PMID:11404095) UniProt PMID:11404095 MGI:2136064 NCBI chr 5:88,702,321...88,703,949
Ensembl chr 5:88,702,321...88,703,949 		JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:10601035)
(PMID:10601036)		 MGI
GO_Central		 PMID:10601035 PMID:10601036 GO_REF:0000033 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488 		JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:83,688,221...83,715,295
Ensembl chr 6:83,688,246...83,715,295 		JBrowse link
G Vps13b vacuolar protein sorting 13B acts_upstream_of_or_within IMP (PMID:37573958) MGI PMID:37573958 NCBI chr15:35,371,264...35,931,375
Ensembl chr15:35,371,306...35,931,375 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 3:108,498,302...108,553,035
Ensembl chr 3:108,498,595...108,553,035 		JBrowse link
G Zfp335 zinc finger protein 335 involved_in IMP
IBA
ISO		 (MGI:5468205|PMID:23178126) UniProt
GO_Central
MGI		 PMID:23178126 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5468205 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677 		JBrowse link
G Zic1 zinc finger protein of the cerebellum 1 involved_in IDA
ISO		 (MGI:78770|PMID:7931345) UniProt
MGI		 PMID:7931345 GO_REF:0000119 MGI:4834177 MGI:78770 NCBI chr 9:91,240,111...91,250,136
Ensembl chr 9:91,240,111...91,247,863 		JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412 		JBrowse link
G Akt3 thymoma viral proto-oncogene 3 acts_upstream_of_or_within IMP (PMID:15713641) MGI PMID:15713641 NCBI chr 1:176,847,642...177,091,688
Ensembl chr 1:176,847,639...177,085,769 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 8:94,794,580...94,825,997
Ensembl chr 8:94,794,582...94,825,556 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr18:16,721,934...16,942,303
Ensembl chr18:16,721,934...16,942,303 		JBrowse link
G Ctnna2 catenin alpha 2 involved_in IMP (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chr 6:76,858,620...77,956,798
Ensembl chr 6:76,858,620...77,956,682 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within IGI (PMID:25100583)
(PMID:23178126)		 MGI PMID:23178126 PMID:25100583 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Fancc Fanconi anemia, complementation group C acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr13:63,452,519...63,645,126
Ensembl chr13:63,432,857...63,645,092 		JBrowse link
G Fancd2 Fanconi anemia, complementation group D2 acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr 6:113,508,622...113,573,981
Ensembl chr 6:113,508,643...113,573,978 		JBrowse link
G Fbxw11 F-box and WD-40 domain protein 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:32,592,595...32,696,816
Ensembl chr11:32,592,724...32,696,816 		JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr10:42,057,841...42,152,691
Ensembl chr10:42,057,837...42,152,751 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within IMP (PMID:17954912) MGI PMID:17954912 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273 		JBrowse link
G Mir124a-1 microRNA 124a-1 acts_upstream_of_or_within IMP (PMID:21857657) MGI PMID:21857657 NCBI chr14:64,828,106...64,828,190
Ensembl chr14:64,828,106...64,828,190 		JBrowse link
G Mkks McKusick-Kaufman syndrome acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 2:136,715,700...136,733,422
Ensembl chr 2:136,715,700...136,733,309 		JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:30503862) MGI PMID:30503862 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pax2 paired box 2 involved_in IMP (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310 		JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:20096683) MGI PMID:20096683 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (PMID:17614943) MGI PMID:17614943 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within IGI (PMID:17614943) MGI PMID:17614943 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003 		JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IMP (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464 		JBrowse link
G Slc4a10 solute carrier family 4, sodium bicarbonate cotransporter-like, member 10 acts_upstream_of_or_within IMP (PMID:18165320) MGI PMID:18165320 NCBI chr 2:61,876,815...62,157,087
Ensembl chr 2:61,876,806...62,157,074 		JBrowse link
G Slc6a4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 involved_in IMP (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr11:76,889,423...76,923,169
Ensembl chr11:76,889,429...76,923,166 		JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within IMP (PMID:21715716) MGI PMID:21715716 NCBI chr15:9,578,279...9,748,954
Ensembl chr15:9,578,279...9,748,954 		JBrowse link
G Vps51 VPS51 GARP complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:6,117,872...6,127,217
Ensembl chr19:6,117,872...6,127,261 		JBrowse link
G Zfp335 zinc finger protein 335 acts_upstream_of_or_within IMP
IGI		 (PMID:23178126) MGI PMID:23178126 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677 		JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within IMP (PMID:7903221) MGI PMID:7903221 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP (PMID:9367425) MGI PMID:9367425 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within IMP (PMID:7925021) MGI PMID:7925021 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985 		JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of IGI (PMID:18579678) MGI PMID:18579678 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of IDA (PMID:18579678) MGI PMID:18579678 NCBI chr 3:127,426,382...127,429,285
Ensembl chr 3:127,426,784...127,429,280 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IMP (PMID:15548218) MGI PMID:15548218 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976 		JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within IMP
IGI		 (PMID:17922007) MGI PMID:17922007 NCBI chr 2:147,884,797...147,888,889
Ensembl chr 2:147,884,797...147,888,889 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:10357893) MGI PMID:10357893 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within IMP (PMID:17922007) MGI PMID:17922007 NCBI chr 5:67,251,751...67,256,399
Ensembl chr 5:67,251,742...67,256,644 		JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbx1 developing brain homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:49,281,247...49,286,583
Ensembl chr 7:49,281,247...49,286,597 		JBrowse link
G Notch1 notch 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IMP (MGI:4887555|PMID:19046377) UniProt PMID:19046377 MGI:4887555 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within IGI (MGI:3723363|PMID:17573818) UniProt PMID:17573818 MGI:3723363 NCBI chr 3:101,917,425...101,922,808
Ensembl chr 3:101,917,392...101,922,808 		JBrowse link
G Pou4f1 POU domain, class 4, transcription factor 1 acts_upstream_of_or_within IMP (PMID:8955272) MGI PMID:8955272 NCBI chr14:104,699,111...104,705,554
Ensembl chr14:104,699,112...104,705,435 		JBrowse link
G Sema4c sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C involved_in IMP (MGI:4881530|PMID:21122816) UniProt PMID:21122816 MGI:4881530 NCBI chr 1:36,587,720...36,599,780
Ensembl chr 1:36,587,720...36,597,430 		JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of IMP (PMID:25099998) MGI PMID:25099998 NCBI chr16:13,802,975...13,922,916
Ensembl chr16:13,804,468...13,919,364 		JBrowse link
G Dab2ip disabled 2 interacting protein involved_in IMP (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chr 2:35,448,285...35,621,006
Ensembl chr 2:35,448,278...35,621,006 		JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:10970885) MGI PMID:10970885 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within IMP (PMID:15677725) MGI PMID:15677725 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963 		JBrowse link
G Disc1 disrupted in schizophrenia 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 8:125,773,928...125,991,882
Ensembl chr 8:125,780,934...125,988,597 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within IMP (PMID:10729342) MGI PMID:10729342 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Fabp7 fatty acid binding protein 7, brain acts_upstream_of_or_within IMP (PMID:18001149) MGI PMID:18001149 NCBI chr10:57,661,019...57,664,546
Ensembl chr10:57,660,977...57,664,546 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16613831) MGI PMID:16613831 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within IMP (PMID:18957199) MGI PMID:18957199 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374 		JBrowse link
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249 		JBrowse link
G Lhx5 LIM homeobox protein 5 acts_upstream_of_or_within IMP (PMID:10325223) MGI PMID:10325223 NCBI chr 5:120,569,951...120,579,522
Ensembl chr 5:120,569,764...120,579,288 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within IMP (PMID:17928865) MGI PMID:17928865 NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283 		JBrowse link
G Nfib nuclear factor I/B involved_in IMP (PMID:27965439) MGI PMID:27965439 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP
IDA		 (PMID:27965439) MGI PMID:27965439 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Ngf nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chr 3:102,377,235...102,428,329
Ensembl chr 3:102,377,235...102,428,329 		JBrowse link
G Rrm1 ribonucleotide reductase M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chr 7:102,090,902...102,118,978
Ensembl chr 7:102,090,902...102,118,978 		JBrowse link
G Six3 sine oculis-related homeobox 3 involved_in IMP (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IDA (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B involved_in IDA (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IMP (PMID:17644613) MGI PMID:17644613 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407 		JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement component 5a receptor 1 involved_in ISO RGD
MGI		 PMID:18635264 GO_REF:0000096 MGI:4417868 RGD:5129699 NCBI chr 7:15,980,668...15,993,465
Ensembl chr 7:15,980,668...15,993,465 		JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within IGI (PMID:19842188) MGI PMID:19842188 NCBI chr14:65,429,890...65,499,912
Ensembl chr14:65,429,898...65,499,912 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within IGI (PMID:19842188) MGI PMID:19842188 NCBI chr15:38,869,673...38,901,587
Ensembl chr15:38,869,429...38,901,583 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in IDA (MGI:2679774|PMID:14557550), (MGI:3045659|PMID:15121182) ParkinsonsUK-UCL PMID:14557550 PMID:15121182 MGI:2679774 MGI:3045659 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 involved_in IMP
ISO		 (MGI:4461115|PMID:20018874) CACAO
MGI		 PMID:20018874 GO_REF:0000119 MGI:4461115 MGI:4834177 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IDA (MGI:2679774|PMID:14557550) ParkinsonsUK-UCL PMID:14557550 MGI:2679774 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 disabled 1 acts_upstream_of_or_within IMP (PMID:15091337) MGI PMID:15091337 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IMP
ISO		 (MGI:6742151|PMID:34211179) UniProt
MGI		 PMID:34211179 GO_REF:0000119 MGI:4834177 MGI:6742151 NCBI chr11:30,049,395...30,218,384
Ensembl chr11:30,049,395...30,218,175 		JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 acts_upstream_of_or_within IMP (PMID:16357211) MGI PMID:16357211 NCBI chr 5:122,377,558...122,402,557
Ensembl chr 5:122,375,911...122,402,523 		JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase, H+ transporting, lysosomal accessory protein 2 involved_in IMP
ISO		 (MGI:6467701|PMID:30985297) UniProt
MGI		 PMID:30985297 GO_REF:0000119 MGI:4834177 MGI:6467701 NCBI chr  X:12,453,998...12,483,290
Ensembl chr  X:12,454,040...12,483,288 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IMP (MGI:5576986|PMID:24487234) ARUK-UCL PMID:24487234 MGI:5576986 NCBI chr 9:119,877,749...119,897,362
Ensembl chr 9:119,877,749...119,898,945 		JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IMP (MGI:1352955|PMID:10655590) UniProt PMID:10655590 MGI:1352955 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in IMP (MGI:1931348|PMID:2202907) BHF-UCL PMID:2202907 MGI:1931348 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A member 2 acts_upstream_of_or_within
involved_in		 IMP
ISO		 (MGI:3697245|PMID:17060448) ARUK-UCL
MGI		 PMID:17060448 GO_REF:0000096 MGI:3697245 MGI:4417868 NCBI chr 2:25,318,611...25,338,556
Ensembl chr 2:25,318,715...25,338,552 		JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within IMP (PMID:28063167) MGI PMID:28063167 NCBI chr 2:91,357,092...91,451,024
Ensembl chr 2:91,357,107...91,451,009 		JBrowse link
G Cntn1 contactin 1 involved_in IGI (PMID:31641127) MGI PMID:31641127 NCBI chr15:91,949,034...92,239,834
Ensembl chr15:91,949,046...92,239,848 		JBrowse link
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 acts_upstream_of_or_within IMP (PMID:17952069) MGI PMID:17952069 NCBI chr 7:19,115,942...19,129,619
Ensembl chr 7:19,115,935...19,129,619 		JBrowse link
G Mag myelin-associated glycoprotein involved_in IGI (PMID:31641127) MGI PMID:31641127 NCBI chr 7:30,598,600...30,614,347
Ensembl chr 7:30,598,601...30,614,298 		JBrowse link
G Mios meiosis regulator for oocyte development involved_in IMP (MGI:6870482|PMID:35022234) UniProt PMID:35022234 MGI:6870482 NCBI chr 6:8,209,111...8,240,573
Ensembl chr 6:8,209,222...8,236,274 		JBrowse link
G Mobp myelin-associated oligodendrocytic basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chr 9:119,978,740...120,010,554
Ensembl chr 9:119,978,773...120,010,550 		JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in IMP
ISO		 (MGI:5437806|PMID:22915103) UniProt
MGI		 PMID:22915103 GO_REF:0000119 MGI:4834177 MGI:5437806 NCBI chr 7:95,550,262...96,560,300
Ensembl chr 7:95,820,453...96,560,300 		JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO RGD
MGI		 PMID:21971760 GO_REF:0000096 MGI:4417868 RGD:7241097 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074 		JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:66,206,093...66,218,992
Ensembl chr14:66,205,932...66,218,996 		JBrowse link
G Fa2h fatty acid 2-hydroxylase acts_upstream_of_or_within IMP (PMID:21491498)
(PMID:18815260)		 MGI PMID:18815260 PMID:21491498 NCBI chr 8:112,071,770...112,120,453
Ensembl chr 8:112,071,767...112,120,456 		JBrowse link
G Myrf myelin regulatory factor involved_in IMP
IBA		 (MGI:5437779|PMID:22956843) UniProt
GO_Central		 PMID:22956843 GO_REF:0000033 MGI:5437779 NCBI chr19:10,185,635...10,218,134
Ensembl chr19:10,185,636...10,218,112 		JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 9630013A20Rik RIKEN cDNA 9630013A20 gene acts_upstream_of_or_within IMP (PMID:28041882) MGI PMID:28041882 NCBI chr14:84,696,164...84,713,864
Ensembl chr14:84,696,079...84,713,864 		JBrowse link
G Aspa aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chr11:73,195,813...73,217,677
Ensembl chr11:73,195,818...73,220,422 		JBrowse link
G B4galt5 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr 2:167,140,364...167,191,155
Ensembl chr 2:167,140,364...167,191,103 		JBrowse link
G B4galt6 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr18:20,817,656...20,879,461
Ensembl chr18:20,817,656...20,879,461 		JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within IMP (PMID:18650339) MGI PMID:18650339 NCBI chr 1:132,437,163...132,470,989
Ensembl chr 1:132,437,165...132,470,994 		JBrowse link
G Cntnap1 contactin associated protein-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:101,065,429...101,081,550
Ensembl chr11:101,061,349...101,081,550 		JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:29300891) MGI PMID:29300891 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:21935678) MGI PMID:21935678 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within IMP (PMID:12574417) MGI PMID:12574417 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Gpm6b glycoprotein m6b involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:165,021,911...165,172,028
Ensembl chr  X:165,021,907...165,171,984 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within IMP (PMID:17006542) MGI PMID:17006542 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:16862533) MGI PMID:16862533 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 acts_upstream_of_or_within IMP (PMID:17942730) MGI PMID:17942730 NCBI chr 1:172,168,777...172,201,652
Ensembl chr 1:172,168,777...172,201,652 		JBrowse link
G Mag myelin-associated glycoprotein involved_in IMP (MGI:1202048|PMID:9482783) UniProt PMID:9482783 MGI:1202048 NCBI chr 7:30,598,600...30,614,347
Ensembl chr 7:30,598,601...30,614,298 		JBrowse link
G Mal myelin and lymphocyte protein, T cell differentiation protein acts_upstream_of IMP (PMID:15337780) MGI PMID:15337780 NCBI chr 2:127,475,146...127,498,615
Ensembl chr 2:127,475,146...127,498,615 		JBrowse link
G Myrf myelin regulatory factor involved_in IMP (MGI:3850982|PMID:19596243), (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:19596243 PMID:24204311 PMID:27532821 MGI:3850982 MGI:5544144 MGI:5805298 NCBI chr19:10,185,635...10,218,134
Ensembl chr19:10,185,636...10,218,112 		JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within IMP (PMID:27008863) MGI PMID:27008863 NCBI chr 1:171,893,580...171,910,356
Ensembl chr 1:171,893,580...171,910,362 		JBrowse link
G Nkx6-2 NK6 homeobox 2 acts_upstream_of_or_within IMP (PMID:15601927) MGI PMID:15601927 NCBI chr 7:139,159,292...139,162,726
Ensembl chr 7:139,159,292...139,162,713 		JBrowse link
G Omg oligodendrocyte myelin glycoprotein acts_upstream_of_or_within ISO (PMID:2434274) MGI PMID:2434274 NCBI chr11:79,391,808...79,394,908
Ensembl chr11:79,391,808...79,394,910 		JBrowse link
G Plp1 proteolipid protein (myelin) 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:1694232) MGI
GO_Central		 PMID:1694232 GO_REF:0000033 NCBI chr  X:135,720,897...135,739,331
Ensembl chr  X:135,723,420...135,740,482 		JBrowse link
G Sox10 SRY (sex determining region Y)-box 10 involved_in IMP (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:24204311 PMID:27532821 MGI:5544144 MGI:5805298 NCBI chr15:79,039,113...79,048,690
Ensembl chr15:79,039,108...79,049,440 		JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:29034508) MGI PMID:29034508 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in IMP (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chr 7:16,228,398...16,349,313
Ensembl chr 7:16,227,644...16,348,918 		JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within IMP (PMID:15378065) MGI PMID:15378065 NCBI chr13:98,035,105...98,343,183
Ensembl chr13:98,035,977...98,342,947 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within IMP (PMID:20577052) MGI PMID:20577052 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575 		JBrowse link
G B4galt5 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr 2:167,140,364...167,191,155
Ensembl chr 2:167,140,364...167,191,103 		JBrowse link
G B4galt6 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 involved_in IMP (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr18:20,817,656...20,879,461
Ensembl chr18:20,817,656...20,879,461 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within IMP (PMID:12097474) MGI PMID:12097474 NCBI chr 3:89,660,755...89,671,939
Ensembl chr 3:89,653,502...89,671,939 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within IMP (PMID:15208636) MGI PMID:15208636 NCBI chr11:68,712,260...68,743,961
Ensembl chr11:68,712,260...68,762,684 		JBrowse link
G Prkca protein kinase C, alpha involved_in ISO RGD
MGI		 PMID:18062921 GO_REF:0000096 MGI:4417868 RGD:2293300 NCBI chr11:107,824,213...108,237,360
Ensembl chr11:107,824,213...108,234,754 		JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Ptk2 PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within IMP (PMID:15378065) MGI PMID:15378065 NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129 		JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 ATP/GTP binding protein-like 4 acts_upstream_of_or_within IGI (PMID:30420556) MGI PMID:30420556 NCBI chr 4:110,254,823...111,521,521
Ensembl chr 4:110,254,858...111,521,521 		JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 acts_upstream_of_or_within IGI (PMID:30420556) MGI PMID:30420556 NCBI chr13:59,597,348...59,705,184
Ensembl chr13:59,593,556...59,733,041 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP
IGI		 (PMID:16469766)
(PMID:15169849)		 MGI PMID:15169849 PMID:16469766 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP (PMID:8174230) MGI PMID:8174230 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Brinp1 bone morphogenic protein/retinoic acid inducible neural specific 1 involved_in IDA (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr 4:68,679,609...68,872,634
Ensembl chr 4:68,679,751...68,872,634 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IMP (PMID:20020054) MGI PMID:20020054 NCBI chr 1:134,002,603...134,006,893
Ensembl chr 1:134,002,908...134,006,858 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:8855328) MGI PMID:8855328 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD
MGI		 PMID:9630220 GO_REF:0000096 MGI:4417868 RGD:2289424 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in ISO RGD
MGI		 PMID:17314281 GO_REF:0000096 MGI:4417868 RGD:2325182 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IMP (PMID:16680166) MGI PMID:16680166 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta 1 ISO RGD PMID:15158077 RGD:6480239 NCBI chr 5:71,815,264...72,306,915
Ensembl chr 5:71,815,456...72,306,380 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:10357893) MGI PMID:10357893 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Gba2 glucosidase beta 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:43,566,928...43,578,893
Ensembl chr 4:43,566,928...43,578,873 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IMP (PMID:9886073) MGI PMID:9886073 NCBI chr  X:52,076,955...52,110,537
Ensembl chr  X:52,077,014...52,110,536 		JBrowse link
G Lep leptin acts_upstream_of_or_within IMP (PMID:10592285) MGI PMID:10592285 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876 		JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within IMP
IDA		 (PMID:17726113) MGI PMID:17726113 NCBI chr 9:56,525,743...56,704,355
Ensembl chr 9:56,525,759...56,703,752 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within IMP (PMID:17151281) MGI PMID:17151281 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Map2 microtubule-associated protein 2 involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chr 1:66,214,337...66,481,742
Ensembl chr 1:66,214,432...66,481,742 		JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within IGI
IMP		 (PMID:16410412) MGI PMID:16410412 NCBI chr 3:127,426,382...127,429,285
Ensembl chr 3:127,426,784...127,429,280 		JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in IMP (MGI:5789071|PMID:27223325) UniProt PMID:27223325 MGI:5789071 NCBI chr 7:18,659,319...18,699,244
Ensembl chr 7:18,659,813...18,699,244 		JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chr 6:49,799,690...49,806,487
Ensembl chr 6:49,799,690...49,806,487 		JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 involved_in IMP (MGI:1343962|PMID:8402890) UniProt PMID:8402890 MGI:1343962 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784 		JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK family member involved_in IMP (MGI:4454735|PMID:20399730) UniProt PMID:20399730 MGI:4454735 NCBI chr12:78,795,606...78,887,488
Ensembl chr12:78,795,681...78,887,488 		JBrowse link
G Taok1 TAO kinase 1 involved_in IMP
ISO		 (MGI:6707836|PMID:33565190) UniProt
MGI		 PMID:33565190 GO_REF:0000119 MGI:4834177 MGI:6707836 NCBI chr11:77,419,988...77,516,185
Ensembl chr11:77,419,988...77,498,641 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within IMP (PMID:31537781) MGI PMID:31537781 NCBI chr 9:44,710,697...44,714,248
Ensembl chr 9:44,710,694...44,714,369 		JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b B cell leukemia/lymphoma 11B acts_upstream_of_or_within IGI (PMID:18215621) MGI PMID:18215621 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IGI (PMID:15469980) MGI PMID:15469980 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor, type 1B acts_upstream_of_or_within IGI (PMID:15469980) MGI PMID:15469980 NCBI chr 3:141,540,230...141,875,335
Ensembl chr 3:141,542,897...141,875,186 		JBrowse link
G Brinp2 bone morphogenic protein/retinoic acid inducible neural-specific 2 involved_in IDA (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr 1:158,072,835...158,185,096
Ensembl chr 1:158,072,839...158,183,896 		JBrowse link
G Brinp3 bone morphogenetic protein/retinoic acid inducible neural specific 3 involved_in IDA (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr 1:146,371,367...146,778,210
Ensembl chr 1:146,370,498...146,778,210 		JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit acts_upstream_of_or_within IMP (PMID:6945603) MGI PMID:6945603 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within IMP (PMID:9806922) MGI PMID:9806922 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of
acts_upstream_of_or_within		 IMP (PMID:15148302)
(PMID:17670789)		 MGI PMID:15148302 PMID:17670789 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310 		JBrowse link
G Met met proto-oncogene ISO RGD PMID:18262389 RGD:2317458 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within IMP (PMID:10482234) MGI PMID:10482234 NCBI chr 5:29,678,821...29,683,468
Ensembl chr 5:29,678,032...29,683,468 		JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within IMP (PMID:19592574) MGI PMID:19592574 NCBI chr 5:101,807,050...101,812,577
Ensembl chr 5:101,806,005...101,812,862 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:11113533) MGI
GO_Central		 PMID:11113533 GO_REF:0000033 NCBI chr 2:56,996,845...57,014,152
Ensembl chr 2:56,996,842...57,014,015 		JBrowse link
G Pou4f1 POU domain, class 4, transcription factor 1 acts_upstream_of_or_within IMP (PMID:8876243)
(PMID:8955272)		 MGI PMID:8876243 PMID:8955272 NCBI chr14:104,699,111...104,705,554
Ensembl chr14:104,699,112...104,705,435 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:16571630) MGI PMID:16571630 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sox5 SRY (sex determining region Y)-box 5 acts_upstream_of_or_within IGI (PMID:18215621) MGI PMID:18215621 NCBI chr 6:143,774,151...144,728,008
Ensembl chr 6:143,774,151...144,727,703 		JBrowse link
G Spock1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 involved_in IEP (MGI:1353269|PMID:10640720) UniProt PMID:10640720 MGI:1353269 NCBI chr13:57,569,008...58,056,194
Ensembl chr13:57,569,008...58,056,146 		JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 acts_upstream_of_or_within IMP (PMID:16292311) MGI PMID:16292311 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:19286674) MGI PMID:19286674 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within IMP (PMID:15608630)
(PMID:11344259), (PMID:14687550)		 MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chr 3:89,660,755...89,671,939
Ensembl chr 3:89,653,502...89,671,939 		JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within IGI (PMID:16387638) MGI PMID:16387638 NCBI chr 3:55,149,724...55,446,489
Ensembl chr 3:55,149,785...55,446,489 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IGI (PMID:16387638) MGI PMID:16387638 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307 		JBrowse link
G Ephb1 Eph receptor B1 acts_upstream_of_or_within IDA
IMP		 (PMID:12971893) MGI PMID:12971893 NCBI chr 9:101,799,327...102,231,892
Ensembl chr 9:101,799,327...102,231,892 		JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within IMP (PMID:12971893) MGI PMID:12971893 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299 		JBrowse link
G Ephb3 Eph receptor B3 acts_upstream_of_or_within IDA (PMID:12971893) MGI PMID:12971893 NCBI chr16:21,023,530...21,042,054
Ensembl chr16:21,023,505...21,042,055 		JBrowse link
G Kifbp kinesin family binding protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:62,394,249...62,414,846
Ensembl chr10:62,374,405...62,414,236 		JBrowse link
G Mycbp2 MYC binding protein 2, E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IMP (MGI:3759703|PMID:17901218)
(PMID:18031680)		 UniProt
MGI		 PMID:17901218 PMID:18031680 MGI:3759703 NCBI chr14:103,350,847...103,584,276
Ensembl chr14:103,350,847...103,584,250 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 acts_upstream_of_or_within IMP (PMID:10585298) MGI PMID:10585298 NCBI chr 2:56,996,845...57,014,152
Ensembl chr 2:56,996,842...57,014,015 		JBrowse link
G Prdm8 PR domain containing 8 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 5:98,315,241...98,335,313
Ensembl chr 5:98,315,057...98,336,850 		JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:17197442) MGI
GO_Central		 PMID:17197442 GO_REF:0000033 NCBI chr 7:27,055,808...27,147,128
Ensembl chr 7:27,055,808...27,147,111 		JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zic2 zinc finger protein of the cerebellum 2 involved_in IGI (PMID:17490632) MGI PMID:17490632 NCBI chr14:122,712,796...122,717,740
Ensembl chr14:122,712,847...122,717,264 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IGI (PMID:17490632) MGI PMID:17490632 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in ISO RGD
MGI		 PMID:19682991 GO_REF:0000096 MGI:4417868 RGD:6903898 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:8855328) MGI PMID:8855328 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Clp1 CLP1, cleavage and polyadenylation factor I subunit involved_in IMP
ISO		 (MGI:5568133|PMID:24766809) UniProt
MGI		 PMID:24766809 GO_REF:0000119 MGI:4834177 MGI:5568133 NCBI chr 2:84,553,466...84,557,631
Ensembl chr 2:84,552,448...84,557,694 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO RGD
MGI		 PMID:19339625 GO_REF:0000096 MGI:4417868 RGD:2308917 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within IMP (PMID:20798045) MGI PMID:20798045 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within IMP (PMID:29360985) MGI PMID:29360985 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890 		JBrowse link
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249 		JBrowse link
G Nav2 neuron navigator 2 involved_in IMP (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chr 7:48,608,796...49,259,838
Ensembl chr 7:48,558,464...49,259,838 		JBrowse link
G Neurod2 neurogenic differentiation 2 involved_in IMP (MGI:3621523|PMID:16504944) UniProt PMID:16504944 MGI:3621523 NCBI chr11:98,216,241...98,220,471
Ensembl chr11:98,216,241...98,220,474 		JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:10407039) MGI PMID:10407039 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IGI (PMID:24431450) MGI PMID:24431450 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within IMP
IGI		 (PMID:24431450) MGI PMID:24431450 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460 		JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within IMP (PMID:28556830) MGI PMID:28556830 NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602 		JBrowse link
G Gli1 GLI-Kruppel family member GLI1 acts_upstream_of_or_within IGI (PMID:16571625) MGI PMID:16571625 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP
IGI		 (PMID:16571625) MGI PMID:16571625 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:30503862) MGI PMID:30503862 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:20096683) MGI PMID:20096683 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:16571625) MGI PMID:16571625 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Trnp1 TMF1-regulated nuclear protein 1 involved_in IMP (MGI:5490679|PMID:23622239) UniProt PMID:23622239 MGI:5490679 NCBI chr 4:133,218,408...133,226,446
Ensembl chr 4:133,218,411...133,225,861 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in IMP (PMID:17218254) MGI PMID:17218254 NCBI chr15:98,847,728...98,851,382
Ensembl chr15:98,847,718...98,851,584 		JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pantr2 POU domain, class 3, transcription factor 3 adjacent noncoding transcript 2 acts_upstream_of_or_within IMP (PMID:24381249) MGI PMID:24381249 NCBI chr 1:42,746,221...42,752,614
Ensembl chr 1:42,746,206...42,752,940 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X chromosome acts_upstream_of_or_within IMP (PMID:23861879) MGI PMID:23861879 NCBI chr  X:12,937,221...13,039,567
Ensembl chr  X:12,937,737...13,039,567 		JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in IMP (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chr15:99,394,886...99,432,757
Ensembl chr15:99,394,893...99,426,046 		JBrowse link
G Mdk midkine involved_in IMP (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chr 2:91,760,149...91,762,348
Ensembl chr 2:91,760,150...91,762,642 		JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in IMP (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr 2:120,563,297...120,681,111
Ensembl chr 2:120,563,297...120,681,085 		JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:20153830) GO_Central
MGI		 PMID:20153830 GO_REF:0000033 NCBI chr 7:141,006,359...141,009,475
Ensembl chr 7:141,006,359...141,009,404 		JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serine (or cysteine) peptidase inhibitor, clade E, member 2 acts_upstream_of_or_within IMP (PMID:17409116) MGI PMID:17409116 NCBI chr 1:79,772,038...79,836,382
Ensembl chr 1:79,771,914...79,838,897 		JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249 		JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:9668038) MGI PMID:9668038 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Cbln1 cerebellin 1 precursor protein involved_in IGI (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr 8:88,195,481...88,199,220
Ensembl chr 8:88,195,033...88,199,237 		JBrowse link
G Grid2 glutamate receptor, ionotropic, delta 2 involved_in IGI (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr 6:63,230,118...64,681,305
Ensembl chr 6:63,232,860...64,681,307 		JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain (KIND) containing 1 acts_upstream_of_or_within IMP (PMID:17984326) MGI PMID:17984326 NCBI chr 7:139,474,612...139,521,453
Ensembl chr 7:139,474,612...139,521,450 		JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr 6:35,485,759...35,516,823
Ensembl chr 6:35,485,841...35,516,823 		JBrowse link
G Nfix nuclear factor I/X involved_in
acts_upstream_of_or_within		 IMP (PMID:23042739)
(PMID:21800304)		 MGI PMID:21800304 PMID:23042739 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Nrxn1 neurexin I involved_in IGI (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:97,597,886...97,934,691
Ensembl chr  X:97,597,883...97,934,631 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:4849596 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Top2a topoisomerase (DNA) II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr11:98,883,773...98,915,037
Ensembl chr11:98,883,769...98,915,015 		JBrowse link
G Ulk1 unc-51 like kinase 1 acts_upstream_of_or_within IMP (PMID:10624947) MGI PMID:10624947 NCBI chr 5:110,932,355...110,957,991
Ensembl chr 5:110,932,354...110,957,963 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IDA (PMID:9405095) MGI PMID:9405095 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in IMP (MGI:5689090|PMID:22095825) UniProt PMID:22095825 MGI:5689090 NCBI chr 7:44,461,680...44,466,082
Ensembl chr 7:44,461,680...44,466,082 		JBrowse link
G Egf epidermal growth factor acts_upstream_of IDA (PMID:10027293) MGI PMID:10027293 NCBI chr 3:129,471,223...129,548,971
Ensembl chr 3:129,471,214...129,548,965 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of IDA (PMID:10027293) MGI PMID:10027293 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:16651541) MGI PMID:16651541 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of IDA (PMID:10027293) MGI PMID:10027293 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Psmg1 proteasome (prosome, macropain) assembly chaperone 1 acts_upstream_of_or_within IMP (PMID:20498273) MGI PMID:20498273 NCBI chr16:95,781,133...95,792,160
Ensembl chr16:95,781,133...95,792,160 		JBrowse link
G Rere arginine glutamic acid dipeptide (RE) repeats acts_upstream_of_or_within IMP (PMID:24466353) MGI PMID:24466353 NCBI chr 4:150,365,372...150,706,423
Ensembl chr 4:150,366,103...150,706,423 		JBrowse link
G Rora RAR-related orphan receptor alpha involved_in IMP (MGI:2683830|PMID:14687547) UniProt PMID:14687547 MGI:2683830 NCBI chr 9:68,560,627...69,295,528
Ensembl chr 9:68,561,068...69,295,528 		JBrowse link
G Shh sonic hedgehog involved_in
acts_upstream_of		 IGI
IDA		 (MGI:2683830|PMID:14687547)
(PMID:10027293)
(MGI:5689090|PMID:22095825)		 UniProt
MGI		 PMID:10027293 PMID:14687547 PMID:22095825 MGI:2683830 MGI:5689090 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Zfp423 zinc finger protein 423 acts_upstream_of_or_within IMP (PMID:27727273) MGI PMID:27727273 NCBI chr 8:88,388,438...88,688,665
Ensembl chr 8:88,388,438...88,686,223 		JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within IMP (PMID:18327254) MGI PMID:18327254 NCBI chr 1:194,302,020...194,499,177
Ensembl chr 1:194,300,526...194,499,177 		JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in IMP (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr 2:120,563,297...120,681,111
Ensembl chr 2:120,563,297...120,681,085 		JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit acts_upstream_of_or_within IMP (PMID:7697385) MGI PMID:7697385 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp365 zinc finger protein 365 involved_in IMP (MGI:5559035|PMID:23912123) UniProt PMID:23912123 MGI:5559035 NCBI chr10:67,721,935...67,748,492
Ensembl chr10:67,721,933...67,748,492 		JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk v-crk avian sarcoma virus CT10 oncogene homolog acts_upstream_of_or_within IGI (PMID:19074029) MGI PMID:19074029 NCBI chr11:75,570,020...75,599,254
Ensembl chr11:75,570,085...75,597,734 		JBrowse link
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like acts_upstream_of_or_within IGI (PMID:19074029) MGI PMID:19074029 NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298 		JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chr  X:72,897,384...72,924,843
Ensembl chr  X:72,897,384...72,939,711 		JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within IMP (PMID:26609159) MGI PMID:26609159 NCBI chr19:60,744,425...60,748,352
Ensembl chr19:60,744,425...60,748,352 		JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within IMP (PMID:26609159) MGI PMID:26609159 NCBI chr 7:28,098,947...28,135,616
Ensembl chr 7:28,098,947...28,135,652 		JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding protein 1 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:2159417|PMID:11884758), (MGI:3614720|PMID:16465590), (MGI:4849873|PMID:21074048)
(PMID:10630211)
(PMID:30420556)		 UniProt
MGI		 PMID:10630211 PMID:11884758 PMID:16465590 PMID:21074048 PMID:30420556 MGI:2159417 MGI:3614720 MGI:4849873 NCBI chr13:59,597,348...59,705,184
Ensembl chr13:59,593,556...59,733,041 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:9668038) MGI PMID:9668038 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP (PMID:2473662) MGI PMID:2473662 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within IMP (PMID:10973246) MGI PMID:10973246 NCBI chr 5:121,849,794...121,954,372
Ensembl chr 5:121,849,400...121,954,556 		JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit acts_upstream_of_or_within IMP (PMID:7834360)
(PMID:1306163)
(PMID:10630211)		 MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:20153830) MGI
GO_Central		 PMID:20153830 GO_REF:0000033 NCBI chr 7:141,006,359...141,009,475
Ensembl chr 7:141,006,359...141,009,404 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in IMP (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chr15:99,394,886...99,432,757
Ensembl chr15:99,394,893...99,426,046 		JBrowse link
G Foxp2 forkhead box P2 involved_in IMP (PMID:22133810) MGI PMID:22133810 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IMP (PMID:20041218) MGI PMID:20041218 NCBI chr 9:66,257,694...66,416,057
Ensembl chr 9:66,257,732...66,416,057 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within IMP (PMID:17664423) MGI PMID:17664423 NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653 		JBrowse link
G Lhx1 LIM homeobox protein 1 acts_upstream_of_or_within IGI (PMID:17664423) MGI PMID:17664423 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lhx5 LIM homeobox protein 5 acts_upstream_of_or_within IGI (PMID:17664423) MGI PMID:17664423 NCBI chr 5:120,569,951...120,579,522
Ensembl chr 5:120,569,764...120,579,288 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within IMP (PMID:15345707) MGI PMID:15345707 NCBI chr10:60,113,436...60,138,379
Ensembl chr10:60,113,449...60,138,376 		JBrowse link
G Rora RAR-related orphan receptor alpha acts_upstream_of_or_within IMP (PMID:8996814) MGI PMID:8996814 NCBI chr 9:68,560,627...69,295,528
Ensembl chr 9:68,561,068...69,295,528 		JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within IMP (PMID:21937600)
(PMID:24491816)		 MGI PMID:21937600 PMID:24491816 NCBI chr18:76,934,428...76,988,759
Ensembl chr18:76,944,100...76,988,037 		JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within IMP (PMID:28934388) MGI PMID:28934388 NCBI chr18:31,713,217...31,743,585
Ensembl chr18:31,689,164...31,742,964 		JBrowse link
G Top2a topoisomerase (DNA) II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr11:98,883,773...98,915,037
Ensembl chr11:98,883,769...98,915,015 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within IMP (PMID:29615573) MGI PMID:29615573 NCBI chr 2:66,014,131...66,087,144
Ensembl chr 2:66,014,671...66,086,961 		JBrowse link
G Ttll1 tubulin tyrosine ligase-like 1 acts_upstream_of_or_within IGI (PMID:30420556) MGI PMID:30420556 NCBI chr15:83,367,258...83,402,675
Ensembl chr15:83,367,970...83,395,094 		JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within IMP (PMID:16906134) MGI PMID:16906134 NCBI chr 8:111,759,781...111,784,237
Ensembl chr 8:111,759,776...111,784,296 		JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 acts_upstream_of_or_within IMP (PMID:21052544) MGI PMID:21052544 NCBI chr13:59,597,348...59,705,184
Ensembl chr13:59,593,556...59,733,041 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within IMP (PMID:16625205)
(PMID:20577052)		 MGI PMID:16625205 PMID:20577052 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575 		JBrowse link
G B4galt2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 acts_upstream_of_or_within IMP (PMID:19265195) MGI PMID:19265195 NCBI chr 4:117,730,211...117,740,724
Ensembl chr 4:117,726,457...117,740,684 		JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit acts_upstream_of_or_within IMP (PMID:1306163) MGI PMID:1306163 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in IMP (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chr15:99,394,886...99,432,757
Ensembl chr15:99,394,893...99,426,046 		JBrowse link
G Hspa5 heat shock protein 5 involved_in IMP (MGI:4437543|PMID:19816510) BHF-UCL PMID:19816510 MGI:4437543 NCBI chr 2:34,662,102...34,666,541
Ensembl chr 2:34,661,982...34,667,559 		JBrowse link
G Klhl1 kelch-like 1 acts_upstream_of_or_within IMP (PMID:17005861) MGI PMID:17005861 NCBI chr14:96,342,695...96,756,525
Ensembl chr14:96,340,172...96,756,538 		JBrowse link
G Lt1 lurcher transcript 1 acts_upstream_of_or_within IMP (PMID:15140011) MGI PMID:15140011 NCBI chr 6:64,873,937...64,876,425 JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle acts_upstream_of_or_within IMP (PMID:16481398) MGI PMID:16481398 NCBI chr11:68,581,228...68,707,451
Ensembl chr11:68,582,385...68,707,458 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:17712420) MGI PMID:17712420 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:21800304) MGI PMID:21800304 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Sez6 seizure related gene 6 acts_upstream_of_or_within IGI (PMID:16814779) MGI PMID:16814779 NCBI chr11:77,821,403...77,869,874
Ensembl chr11:77,821,626...77,869,874 		JBrowse link
G Sez6l seizure related 6 homolog like acts_upstream_of_or_within IGI (PMID:16814779) MGI PMID:16814779 NCBI chr 5:112,567,020...112,726,401
Ensembl chr 5:112,567,017...112,725,051 		JBrowse link
G Sez6l2 seizure related 6 homolog like 2 acts_upstream_of_or_within IGI (PMID:16814779) MGI PMID:16814779 NCBI chr 7:126,549,665...126,569,782
Ensembl chr 7:126,549,735...126,569,778 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:53,318,749...53,321,658
Ensembl chr11:53,318,749...53,321,658 		JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within IMP (PMID:17954912) MGI PMID:17954912 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273 		JBrowse link
G Whrn whirlin involved_in IMP (MGI:5516521|PMID:24011083) CACAO PMID:24011083 MGI:5516521 NCBI chr 4:63,333,145...63,414,320
Ensembl chr 4:63,333,147...63,414,228 		JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 acts_upstream_of_or_within IMP (PMID:20502676) MGI PMID:20502676 NCBI chr 9:44,653,440...44,679,105
Ensembl chr 9:44,652,861...44,679,142 		JBrowse link
G Rere arginine glutamic acid dipeptide (RE) repeats acts_upstream_of_or_within IMP (PMID:24466353) MGI PMID:24466353 NCBI chr 4:150,365,372...150,706,423
Ensembl chr 4:150,366,103...150,706,423 		JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:17409239) MGI PMID:17409239 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:32675284) MGI PMID:32675284 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Coq8b coenzyme Q8B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:26,928,112...26,957,374
Ensembl chr 7:26,932,448...26,957,375 		JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 acts_upstream_of_or_within IMP (PMID:20231455) MGI PMID:20231455 NCBI chr19:4,761,236...4,804,006
Ensembl chr19:4,761,195...4,802,388 		JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249 		JBrowse link
cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 acts_upstream_of_or_within IGI (PMID:17664423) MGI PMID:17664423 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lhx5 LIM homeobox protein 5 acts_upstream_of_or_within IGI (PMID:17664423) MGI PMID:17664423 NCBI chr 5:120,569,951...120,579,522
Ensembl chr 5:120,569,764...120,579,288 		JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:7182074 RGD:10047093 NCBI chr16:8,331,293...8,439,432
Ensembl chr16:8,331,293...8,439,432 		JBrowse link
G Acvr1c activin A receptor, type IC ISO RGD PMID:8940033 RGD:631880 NCBI chr 2:58,157,465...58,247,909
Ensembl chr 2:58,157,465...58,247,907 		JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 acts_upstream_of_or_within IMP (PMID:7891151) MGI PMID:7891151 NCBI chr13:59,597,348...59,705,184
Ensembl chr13:59,593,556...59,733,041 		JBrowse link
G Aif1 allograft inflammatory factor 1 ISO RGD PMID:9698327 RGD:704401 NCBI chr17:35,389,967...35,394,977
Ensembl chr17:35,389,967...35,395,044 		JBrowse link
G Ak1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 2:32,511,770...32,525,070
Ensembl chr 2:32,511,770...32,525,070 		JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chr19:28,968,715...29,026,122
Ensembl chr19:28,998,233...29,025,361 		JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 ISO RGD PMID:12843293 RGD:1299593 NCBI chr15:97,141,955...97,145,168
Ensembl chr15:97,142,006...97,145,168 		JBrowse link
G Arhgap32 Rho GTPase activating protein 32 ISO RGD PMID:23226367 RGD:151665335 NCBI chr 9:31,927,921...32,176,061
Ensembl chr 9:32,027,432...32,179,742 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chr 1:71,596,315...71,618,562
Ensembl chr 1:71,596,309...71,618,790 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:16880690) MGI PMID:16880690 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Atrn attractin acts_upstream_of_or_within IMP (PMID:18064672) MGI PMID:18064672 NCBI chr 2:130,734,363...130,872,249
Ensembl chr 2:130,748,415...130,872,253 		JBrowse link
G Ccr1 C-C motif chemokine receptor 1 ISO RGD PMID:12541321 RGD:5688179 NCBI chr 9:123,762,163...123,768,729
Ensembl chr 9:123,762,161...123,768,729 		JBrowse link
G Cd3e CD3 antigen, epsilon polypeptide involved_in IMP (MGI:3718938|PMID:17502348) ARUK-UCL PMID:17502348 MGI:3718938 NCBI chr 9:44,910,033...44,920,961
Ensembl chr 9:44,910,038...44,920,925 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:11226314) MGI PMID:11226314 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 acts_upstream_of_or_within IGI
IMP		 (PMID:11517264)
(PMID:11226314)		 MGI PMID:11226314 PMID:11517264 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010 		JBrowse link
G Cdk5r2 cyclin dependent kinase 5, regulatory subunit 2 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr 1:74,894,188...74,896,891
Ensembl chr 1:74,894,093...74,896,891 		JBrowse link
G Cdkn2a cyclin dependent kinase inhibitor 2A ISO RGD PMID:9693786 RGD:8552681 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 7:141,006,359...141,009,475
Ensembl chr 7:141,006,359...141,009,404 		JBrowse link
G Ckb creatine kinase, brain ISO RGD PMID:12093362 RGD:625711 NCBI chr12:111,635,789...111,638,772
Ensembl chr12:111,635,795...111,638,772 		JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1, ubiquitous ISO RGD PMID:12093362 RGD:625711 NCBI chr 2:121,188,257...121,194,218
Ensembl chr 2:121,188,195...121,194,218 		JBrowse link
G Cntn1 contactin 1 acts_upstream_of_or_within IMP (PMID:18354028) MGI PMID:18354028 NCBI chr15:91,949,034...92,239,834
Ensembl chr15:91,949,046...92,239,848 		JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:32675284) MGI PMID:32675284 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector 1 acts_upstream_of_or_within IMP (PMID:25877302) MGI PMID:25877302 NCBI chr15:8,198,509...8,300,642
Ensembl chr15:8,198,590...8,300,642 		JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16820012 RGD:5131267 NCBI chr 6:55,067,033...55,110,001
Ensembl chr 6:55,067,034...55,110,001 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 ISO RGD PMID:16329132 RGD:1599699 NCBI chr 9:57,905,307...57,934,314
Ensembl chr 9:57,913,694...57,934,306 		JBrowse link
G En1 engrailed 1 involved_in IGI (MGI:82938|PMID:8848044) ParkinsonsUK-UCL PMID:8848044 MGI:82938 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Esr2 estrogen receptor 2 (beta) ISO RGD PMID:16542644 RGD:1601098 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in IMP (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chr15:99,394,886...99,432,757
Ensembl chr15:99,394,893...99,426,046 		JBrowse link
G Fcgr2b Fc receptor, IgG, low affinity IIb involved_in IMP (MGI:3718938|PMID:17502348) ARUK-UCL PMID:17502348 MGI:3718938 NCBI chr 1:170,786,186...170,804,141
Ensembl chr 1:170,786,186...170,804,116 		JBrowse link
G Foxc1 forkhead box C1 involved_in IMP (MGI:4359553|PMID:19668217) UniProt PMID:19668217 MGI:4359553 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within IMP (PMID:15983371)
(PMID:17619227)		 MGI PMID:15983371 PMID:17619227 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976 		JBrowse link
G Gabrb3 GABRB3, gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within IMP (PMID:17983671) MGI PMID:17983671 NCBI chr 7:57,240,266...57,478,550
Ensembl chr 7:57,069,440...57,478,550 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase ISO RGD PMID:7057182 RGD:2301991 NCBI chr16:91,418,283...91,444,505
Ensembl chr16:91,418,074...91,443,840 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:16651541) MGI PMID:16651541 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Gdf10 growth differentiation factor 10 ISO RGD PMID:8605043 RGD:631791 NCBI chr14:33,645,544...33,658,471
Ensembl chr14:33,645,544...33,659,940 		JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO RGD PMID:7182074 RGD:10047093 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222 		JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IMP (MGI:3814764|PMID:18636121) CACAO PMID:18636121 MGI:3814764 NCBI chr11:100,238,153...100,247,808
Ensembl chr11:100,238,153...100,246,954 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:19115409 RGD:10041070 NCBI chr 5:100,103,794...100,126,926
Ensembl chr 5:100,103,794...100,126,797 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr13:58,538,946...58,551,157
Ensembl chr13:58,538,956...58,551,157 		JBrowse link
G Hspa8 heat shock protein 8 ISO RGD PMID:9764759 RGD:10059383 NCBI chr 9:40,712,572...40,716,498
Ensembl chr 9:40,712,280...40,721,383 		JBrowse link
G Igf1r insulin-like growth factor I receptor involved_in ISO RGD
MGI		 PMID:21443795 PMID:23397157 GO_REF:0000096 MGI:4417868 RGD:10403039 RGD:12904969 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416 		JBrowse link
G Insr insulin receptor ISO RGD PMID:23397157 RGD:10403039 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Kcnc1 potassium voltage gated channel, Shaw-related subfamily, member 1 ISO RGD PMID:9526005 RGD:9685724 NCBI chr 7:46,045,643...46,088,130
Ensembl chr 7:46,045,921...46,088,128 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within IMP (PMID:17664423) MGI PMID:17664423 NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653 		JBrowse link
G Lhx1 LIM homeobox protein 1 acts_upstream_of_or_within IGI (PMID:17664423) MGI PMID:17664423 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lhx5 LIM homeobox protein 5 acts_upstream_of_or_within IGI (PMID:17664423) MGI PMID:17664423 NCBI chr 5:120,569,951...120,579,522
Ensembl chr 5:120,569,764...120,579,288 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IMP (PMID:1638738) MGI PMID:1638738 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chr 4:58,435,252...58,554,601
Ensembl chr 4:58,435,255...58,553,898 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO
IMP		 (PMID:18571096) RGD
MGI		 PMID:14751287 PMID:18571096 RGD:12743658 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G mt-Co1 cytochrome c oxidase I, mitochondrial ISO RGD PMID:2465379 RGD:2302317 NCBI chr MT:5,328...6,872
Ensembl chr MT:5,328...6,872 		JBrowse link
G mt-Nd4 NADH dehydrogenase 4, mitochondrial ISO RGD PMID:2465379 RGD:2302317 NCBI chr MT:10,167...11,544
Ensembl chr MT:10,167...11,544 		JBrowse link
G Myo16 myosin XVI involved_in ISO PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr 8:10,203,911...10,684,742
Ensembl chr 8:10,203,911...10,684,742 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:10803578 PMID:15876152 RGD:2293531 RGD:5688232 NCBI chr12:4,297,362...4,569,452
Ensembl chr12:4,297,362...4,527,182 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr 1:13,209,329...13,444,451
Ensembl chr 1:13,209,329...13,444,307 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO RGD PMID:10803578 RGD:2293531 NCBI chr 2:165,834,557...165,915,162
Ensembl chr 2:165,834,545...165,915,162 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO RGD PMID:10803578 RGD:2293531 NCBI chr11:62,207,132...62,348,200
Ensembl chr11:62,207,252...62,349,367 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283 		JBrowse link
G Ncstn nicastrin ISO RGD PMID:16298244 RGD:13801190 NCBI chr 1:171,893,580...171,910,356
Ensembl chr 1:171,893,580...171,910,362 		JBrowse link
G Neurod1 neurogenic differentiation 1 involved_in IMP
ISO		 (MGI:2159022|PMID:10398678) UniProt
RGD		 PMID:10398678 PMID:12242038 MGI:2159022 RGD:1625048 NCBI chr 2:79,282,981...79,286,980
Ensembl chr 2:79,282,865...79,287,095 		JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:21800304) MGI PMID:21800304 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Nlgn4l neuroligin 4-like involved_in IMP (MGI:3774711|PMID:18227507) BHF-UCL PMID:18227507 MGI:3774711 NCBI chr  X:169,066,267...169,089,058 JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 involved_in IMP (MGI:5285161|PMID:20393820) UniProt PMID:20393820 MGI:5285161 NCBI chr 6:92,068,426...92,150,039
Ensembl chr 6:92,068,371...92,151,275 		JBrowse link
G Ntm neurotrimin ISO RGD PMID:12373100 RGD:2314481 NCBI chr 9:28,906,045...29,874,565
Ensembl chr 9:28,906,046...29,874,437 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO RGD PMID:20395366 RGD:11533946 NCBI chr 7:97,437,748...97,561,588
Ensembl chr 7:97,437,748...97,561,588 		JBrowse link
G Pax6 paired box 6 ISO RGD PMID:11688562 RGD:8552644 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pdss2 prenyl (solanesyl) diphosphate synthase, subunit 2 involved_in IMP (MGI:5304241|PMID:21871565) UniProt PMID:21871565 MGI:5304241 NCBI chr10:43,095,396...43,340,878
Ensembl chr10:43,097,482...43,340,878 		JBrowse link
G Pfdn1 prefoldin 1 acts_upstream_of_or_within IMP (PMID:18566413) MGI PMID:18566413 NCBI chr18:36,536,732...36,587,548
Ensembl chr18:36,536,729...36,587,577 		JBrowse link
G Pianp PILR alpha associated neural protein acts_upstream_of_or_within IMP (PMID:31511635) MGI PMID:31511635 NCBI chr 6:124,973,683...124,980,059
Ensembl chr 6:124,973,657...124,980,059 		JBrowse link
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 5:51,611,591...52,273,316
Ensembl chr 5:51,611,592...51,725,068 		JBrowse link
G Prkg1 protein kinase, cGMP-dependent, type I ISO RGD PMID:15763176 RGD:7777107 NCBI chr19:30,541,887...31,742,675
Ensembl chr19:30,541,889...31,742,433 		JBrowse link
G Psen1 presenilin 1 ISO RGD PMID:16298244 RGD:13801190 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 ISO RGD PMID:9917071 RGD:10045971 NCBI chr 3:119,512,390...119,578,296
Ensembl chr 3:119,512,391...119,578,115 		JBrowse link
G Ptf1a pancreas specific transcription factor, 1a involved_in IMP
ISO		 (MGI:3703683|PMID:15543146) UniProt
MGI		 PMID:15543146 GO_REF:0000119 MGI:3703683 MGI:4834177 NCBI chr 2:19,450,474...19,452,312
Ensembl chr 2:19,450,474...19,452,312 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:8653419 RGD:10043831 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IMP (PMID:15842738) MGI PMID:15842738 NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483 		JBrowse link
G Rere arginine glutamic acid dipeptide (RE) repeats acts_upstream_of_or_within IMP (PMID:24466353) MGI PMID:24466353 NCBI chr 4:150,365,372...150,706,423
Ensembl chr 4:150,366,103...150,706,423 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17558409) MGI PMID:17558409 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha ISO RGD PMID:22331407 RGD:6484221 NCBI chr 9:119,312,470...119,408,096
Ensembl chr 9:119,312,474...119,408,082 		JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in ISS (MGI:3847867|PMID:18355758) BHF-UCL PMID:18355758 MGI:3847867 NCBI chr 4:156,077,300...156,098,067
Ensembl chr 4:156,077,329...156,098,067 		JBrowse link
G Sema4c sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C involved_in IMP (MGI:4881530|PMID:21122816) UniProt PMID:21122816 MGI:4881530 NCBI chr 1:36,587,720...36,599,780
Ensembl chr 1:36,587,720...36,597,430 		JBrowse link
G Sstr1 somatostatin receptor 1 ISO RGD PMID:9166718 RGD:2325007 NCBI chr12:58,258,524...58,262,822
Ensembl chr12:58,258,558...58,260,673 		JBrowse link
G Sstr2 somatostatin receptor 2 ISO RGD PMID:9166718 RGD:2325007 NCBI chr11:113,510,153...113,516,854
Ensembl chr11:113,510,168...113,516,854 		JBrowse link
G Sstr3 somatostatin receptor 3 ISO RGD PMID:9166718 RGD:2325007 NCBI chr15:78,421,214...78,433,565
Ensembl chr15:78,421,208...78,428,885 		JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within IDA (PMID:24013501) MGI PMID:24013501 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in IMP (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr 2:120,563,297...120,681,111
Ensembl chr 2:120,563,297...120,681,085 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within IMP (PMID:29615573) MGI PMID:29615573 NCBI chr 2:66,014,131...66,087,144
Ensembl chr 2:66,014,671...66,086,961 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in IMP (MGI:82938|PMID:8848044) ParkinsonsUK-UCL PMID:8848044 MGI:82938 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within IMP (PMID:19409883) MGI PMID:19409883 NCBI chr 1:177,269,892...177,278,330
Ensembl chr 1:177,269,917...177,278,330 		JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in IMP (MGI:1931348|PMID:2202907) BHF-UCL PMID:2202907 MGI:1931348 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit acts_upstream_of_or_within IMP (PMID:11344116) MGI PMID:11344116 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:20980600) MGI PMID:20980600 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:20980600) MGI PMID:20980600 NCBI chr 1:156,386,160...156,477,189
Ensembl chr 1:156,386,356...156,477,138 		JBrowse link
G Cbs cystathionine beta-synthase acts_upstream_of_or_within IMP (PMID:16160063) MGI PMID:16160063 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP (PMID:11456442) MGI PMID:11456442 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within IMP (PMID:19270340) MGI PMID:19270340 NCBI chr 8:125,589,772...125,616,796
Ensembl chr 8:125,589,772...125,616,796 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within IMP (PMID:17166916) MGI PMID:17166916 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:11029008) MGI PMID:11029008 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within IMP (PMID:21937600) MGI PMID:21937600 NCBI chr18:76,934,428...76,988,759
Ensembl chr18:76,944,100...76,988,037 		JBrowse link
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 involved_in IMP (MGI:5902647|PMID:28002403) UniProt PMID:28002403 MGI:5902647 NCBI chr 7:24,246,124...24,272,863
Ensembl chr 7:24,245,714...24,272,865 		JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 disabled 1 acts_upstream_of_or_within IMP (PMID:9338785) MGI PMID:9338785 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Hspa5 heat shock protein 5 involved_in IMP (MGI:4437543|PMID:19816510) BHF-UCL PMID:19816510 MGI:4437543 NCBI chr 2:34,662,102...34,666,541
Ensembl chr 2:34,661,982...34,667,559 		JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 involved_in IMP (MGI:3621833|PMID:15035989) BHF-UCL PMID:15035989 MGI:3621833 NCBI chr 7:89,053,574...89,062,341
Ensembl chr 7:89,053,563...89,062,342 		JBrowse link
cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 disabled 1 acts_upstream_of_or_within IMP (PMID:15249135) MGI PMID:15249135 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817 		JBrowse link
G Efhc1 EF-hand domain (C-terminal) containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:21,021,776...21,061,065
Ensembl chr 1:21,021,850...21,061,065 		JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within IMP (PMID:7618084) MGI PMID:7618084 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in IMP (MGI:5431268|PMID:22726441) UniProt PMID:22726441 MGI:5431268 NCBI chr  X:58,107,499...58,630,932
Ensembl chr  X:58,107,505...58,613,431 		JBrowse link
G Htr6 5-hydroxytryptamine (serotonin) receptor 6 involved_in IMP (MGI:5607347|PMID:25078650) UniProt PMID:25078650 MGI:5607347 NCBI chr 4:138,787,017...138,802,881
Ensembl chr 4:138,788,419...138,802,881 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:16920270) MGI PMID:16920270 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:18786357) MGI PMID:18786357 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within IMP (PMID:12897163) MGI PMID:12897163 NCBI chr11:23,597,283...23,615,883
Ensembl chr11:23,596,479...23,615,959 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within IMP (PMID:10653000), (PMID:9288097) MGI PMID:9288097 PMID:10653000 NCBI chr 6:124,373,774...124,392,878
Ensembl chr 6:124,373,775...124,392,026 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IMP (PMID:16079160) MGI PMID:16079160 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within IMP (PMID:22405202) MGI PMID:22405202 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133 		JBrowse link
cerebral cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within IGI
IMP		 (PMID:25100583) MGI PMID:25100583 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412 		JBrowse link
G Ahsg alpha-2-HS-glycoprotein ISO RGD PMID:2423927 RGD:1626077 NCBI chr16:22,710,793...22,718,193
Ensembl chr16:22,710,027...22,718,199 		JBrowse link
G Akirin2 akirin 2 involved_in IMP (MGI:5811685|PMID:27871306) UniProt PMID:27871306 MGI:5811685 NCBI chr 4:34,550,615...34,566,930
Ensembl chr 4:34,550,937...34,566,908 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:17678855) MGI PMID:17678855 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Aspm abnormal spindle microtubule assembly acts_upstream_of_or_within IMP (PMID:24220505) MGI PMID:24220505 NCBI chr 1:139,381,450...139,421,826
Ensembl chr 1:139,382,510...139,421,829 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within IMP (PMID:16625205) MGI PMID:16625205 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chr 1:71,596,315...71,618,562
Ensembl chr 1:71,596,309...71,618,790 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:16325379) MGI PMID:16325379 NCBI chr 6:64,706,109...64,708,229
Ensembl chr 6:64,706,109...64,708,229 		JBrowse link
G Atp1a3 ATPase, Na+/K+ transporting, alpha 3 polypeptide acts_upstream_of_or_within ISO
IMP		 (PMID:23527305) RGD
MGI		 PMID:19362129 PMID:23527305 RGD:11576282 NCBI chr 7:24,677,592...24,705,338
Ensembl chr 7:24,677,592...24,705,383 		JBrowse link
G Bad BCL2-associated agonist of cell death ISO RGD PMID:9813151 RGD:2315711 NCBI chr19:6,919,229...6,929,273
Ensembl chr19:6,919,229...6,929,267 		JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within ISO
IMP		 (PMID:15342910) RGD
MGI		 PMID:9813151 PMID:15342910 RGD:2315711 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 8:94,794,580...94,825,997
Ensembl chr 8:94,794,582...94,825,556 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 ISO RGD PMID:9813151 RGD:2315711 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bcl2a1b B cell leukemia/lymphoma 2 related protein A1b ISO RGD PMID:9813151 RGD:2315711 NCBI chr 9:89,081,326...89,089,891
Ensembl chr 9:89,081,262...89,089,880 		JBrowse link
G Bcl2l1 BCL2-like 1 ISO RGD PMID:9813151 RGD:2315711 NCBI chr 2:152,600,652...152,673,632
Ensembl chr 2:152,622,588...152,673,648 		JBrowse link
G Bnip3 BCL2/adenovirus E1B interacting protein 3 ISO RGD PMID:16765336 RGD:11561980 NCBI chr 7:138,492,565...138,511,235
Ensembl chr 7:138,492,565...138,511,248 		JBrowse link
G Btbd3 BTB domain containing 3 involved_in IMP
IBA		 (MGI:5527009|PMID:24179155) UniProt
GO_Central		 PMID:24179155 GO_REF:0000033 MGI:5527009 NCBI chr 2:138,098,478...138,129,344
Ensembl chr 2:138,098,485...138,431,212 		JBrowse link
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO RGD PMID:10749215 RGD:11576295 NCBI chr  X:13,383,319...13,713,020
Ensembl chr  X:13,383,319...13,717,606 		JBrowse link
G Ccdc85c coiled-coil domain containing 85C involved_in IMP (MGI:5305566|PMID:22056358) UniProt PMID:22056358 MGI:5305566 NCBI chr12:108,169,858...108,244,111
Ensembl chr12:108,169,861...108,241,684 		JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr18:16,721,934...16,942,303
Ensembl chr18:16,721,934...16,942,303 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:9698328) MGI PMID:9698328 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of_or_within IMP (PMID:16648472) MGI PMID:16648472 NCBI chr 9:35,332,836...35,418,948
Ensembl chr 9:35,332,424...35,418,948 		JBrowse link
G Celf1 CUGBP, Elav-like family member 1 acts_upstream_of_or_within IMP (PMID:32245946) MGI PMID:32245946 NCBI chr 2:90,770,604...90,849,842
Ensembl chr 2:90,770,727...90,849,842 		JBrowse link
G Cep120 centrosomal protein 120 acts_upstream_of_or_within IMP (PMID:17920017) MGI PMID:17920017 NCBI chr18:53,814,795...53,877,825
Ensembl chr18:53,814,795...53,877,680 		JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in ISO (PMID:18179893), (PMID:18987363) BHF-UCL PMID:18179893 PMID:18987363 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in IMP (MGI:5288127|PMID:21768377) UniProt PMID:21768377 MGI:5288127 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Crk v-crk avian sarcoma virus CT10 oncogene homolog acts_upstream_of_or_within IGI (PMID:19074029) MGI PMID:19074029 NCBI chr11:75,570,020...75,599,254
Ensembl chr11:75,570,085...75,597,734 		JBrowse link
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like acts_upstream_of_or_within IGI (PMID:19074029) MGI PMID:19074029 NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298 		JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISO RGD PMID:12801913 RGD:634609 NCBI chr 2:145,759,402...145,776,620
Ensembl chr 2:145,759,399...145,776,934 		JBrowse link
G Csnk2a1 casein kinase 2, alpha 1 polypeptide ISO RGD PMID:7735332 RGD:11565823 NCBI chr 2:152,068,468...152,123,772
Ensembl chr 2:152,068,759...152,123,772 		JBrowse link
G Csnk2a2 casein kinase 2, alpha prime polypeptide ISO RGD PMID:7735332 RGD:11565823 NCBI chr 8:96,172,724...96,215,505
Ensembl chr 8:96,172,724...96,216,667 		JBrowse link
G Dab1 disabled 1 ISO RGD PMID:20368265 RGD:2324624 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:22473424 RGD:10411906 NCBI chr18:71,386,703...72,484,299
Ensembl chr18:71,386,705...72,484,140 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:18997113) MGI PMID:18997113 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 ISO RGD PMID:14597197 RGD:152975667 NCBI chr11:69,908,029...69,938,107
Ensembl chr11:69,907,768...69,938,348 		JBrowse link
G Dmd dystrophin, muscular dystrophy ISO RGD PMID:1454857 RGD:12880362 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:16892058)
(PMID:25100583)
(PMID:12764040)		 MGI PMID:12764040 PMID:16892058 PMID:25100583 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within IGI (PMID:12764040) MGI PMID:12764040 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Eomes eomesodermin involved_in IMP (PMID:30186101) MGI PMID:30186101 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200 		JBrowse link
G Fat4 FAT atypical cadherin 4 involved_in IMP (MGI:4821246|PMID:19506035) UniProt PMID:19506035 MGI:4821246 NCBI chr 3:38,939,867...39,066,134
Ensembl chr 3:38,941,089...39,066,134 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within IMP (PMID:29360985) MGI PMID:29360985 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890 		JBrowse link
G Flna filamin, alpha ISO RGD PMID:22076441 RGD:11564351 NCBI chr  X:73,267,067...73,293,787
Ensembl chr  X:73,267,067...73,293,426 		JBrowse link
G Fos FBJ osteosarcoma oncogene ISO RGD PMID:32385110 RGD:405649740 NCBI chr12:85,520,664...85,524,048
Ensembl chr12:85,520,664...85,524,047 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IDA (PMID:22726835) MGI PMID:22726835 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Foxp2 forkhead box P2 involved_in ISO (PMID:18987363) BHF-UCL PMID:18987363 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase ISO RGD PMID:7057182 RGD:2301991 NCBI chr16:91,418,283...91,444,505
Ensembl chr16:91,418,074...91,443,840 		JBrowse link
G Gng12 guanine nucleotide binding protein (G protein), gamma 12 ISO RGD PMID:9003074 RGD:2314446 NCBI chr 6:66,873,381...66,998,345
Ensembl chr 6:66,873,381...66,998,334 		JBrowse link
G Gria1 glutamate receptor, ionotropic, AMPA1 (alpha 1) ISO RGD PMID:14597197 RGD:152975667 NCBI chr11:56,902,342...57,221,070
Ensembl chr11:56,902,213...57,221,070 		JBrowse link
G Gria2 glutamate receptor, ionotropic, AMPA2 (alpha 2) ISO RGD PMID:14597197 RGD:152975667 NCBI chr 3:80,588,757...80,711,534
Ensembl chr 3:80,588,757...80,710,142 		JBrowse link
G Grin1 glutamate receptor, ionotropic, NMDA1 (zeta 1) acts_upstream_of_or_within IMP (PMID:12657691)
(PMID:10963597)		 MGI PMID:10963597 PMID:12657691 NCBI chr 2:25,181,189...25,209,199
Ensembl chr 2:25,181,193...25,209,199 		JBrowse link
G Grin2a glutamate receptor, ionotropic, NMDA2A (epsilon 1) ISO RGD PMID:19409459 RGD:2325985 NCBI chr16:9,385,765...9,813,744
Ensembl chr16:9,385,762...9,813,424 		JBrowse link
G Grin2b glutamate receptor, ionotropic, NMDA2B (epsilon 2) ISO RGD PMID:19409459 RGD:2325985 NCBI chr 6:135,690,219...136,150,658
Ensembl chr 6:135,690,231...136,150,509 		JBrowse link
G Grip1 glutamate receptor interacting protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr10:119,289,810...119,923,172
Ensembl chr10:119,289,735...119,923,166 		JBrowse link
G H2ax H2A.X variant histone ISO RGD PMID:3622934 RGD:8693731 NCBI chr 9:44,246,012...44,247,374
Ensembl chr 9:44,245,991...44,247,374 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IMP (PMID:12972594) MGI PMID:12972594 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in ISO RGD
MGI		 PMID:18054780 PMID:22102872 GO_REF:0000096 MGI:4417868 RGD:10002783 RGD:10041004 NCBI chr13:58,538,946...58,551,157
Ensembl chr13:58,538,956...58,551,157 		JBrowse link
G Kcna1 potassium voltage-gated channel, shaker-related subfamily, member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:126,613,426...126,622,764
Ensembl chr 6:126,617,360...126,623,347 		JBrowse link
G Kcna2 potassium voltage-gated channel, shaker-related subfamily, member 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 3:106,998,203...107,022,321
Ensembl chr 3:107,008,462...107,022,321 		JBrowse link
G Kcnc4 potassium voltage gated channel, Shaw-related subfamily, member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 3:107,345,614...107,367,617
Ensembl chr 3:107,345,619...107,366,868 		JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A ISO RGD PMID:20164337 RGD:9588288 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034 		JBrowse link
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249 		JBrowse link
G Kif26a kinesin family member 26A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:112,109,378...112,148,181
Ensembl chr12:112,112,642...112,148,181 		JBrowse link
G Kif5a kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr10:127,061,564...127,102,217
Ensembl chr10:127,061,565...127,099,217 		JBrowse link
G Lhx2 LIM homeobox protein 2 involved_in
acts_upstream_of_or_within		 IMP (MGI:5699500|PMID:26371318), (MGI:5817507|PMID:28053041)
(PMID:19820705)		 UniProt
MGI		 PMID:19820705 PMID:26371318 PMID:28053041 MGI:5699500 MGI:5817507 NCBI chr 2:38,229,282...38,259,747
Ensembl chr 2:38,229,293...38,259,745 		JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 ISO RGD PMID:8930375 RGD:10046019 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:16920270) MGI PMID:16920270 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Lrp8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor ISO RGD PMID:20368265 RGD:2324624 NCBI chr 4:107,659,337...107,734,037
Ensembl chr 4:107,659,066...107,734,037 		JBrowse link
G Mcph1 microcephaly, primary autosomal recessive 1 acts_upstream_of_or_within IMP (PMID:21947081) MGI PMID:21947081 NCBI chr 8:18,645,132...18,858,110
Ensembl chr 8:18,645,147...18,853,205 		JBrowse link
G Mdk midkine involved_in IEP (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chr 2:91,760,149...91,762,348
Ensembl chr 2:91,760,150...91,762,642 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:14751287 RGD:12743658 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Mgarp mitochondria localized glutamic acid rich protein involved_in IMP (MGI:6760736|PMID:24323429) UniProt PMID:24323429 MGI:6760736 NCBI chr 3:51,295,833...51,303,968
Ensembl chr 3:51,295,833...51,304,159 		JBrowse link
G Mkks McKusick-Kaufman syndrome acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 2:136,715,700...136,733,422
Ensembl chr 2:136,715,700...136,733,309 		JBrowse link
G Nars1 asparaginyl-tRNA synthetase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:64,632,726...64,649,586
Ensembl chr18:64,632,718...64,649,723 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:12551846 RGD:5688241 NCBI chr12:4,297,362...4,569,452
Ensembl chr12:4,297,362...4,527,182 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within		 ISO
IGI		 (PMID:18469343) MGI PMID:18469343 GO_REF:0000119 MGI:4834177 NCBI chr16:13,981,139...14,010,792
Ensembl chr16:13,981,139...14,010,792 		JBrowse link
G Nefh neurofilament, heavy polypeptide ISO RGD PMID:10439464 RGD:9743942 NCBI chr11:4,888,754...4,898,064
Ensembl chr11:4,888,754...4,898,064 		JBrowse link
G Nefl neurofilament, light polypeptide ISO RGD PMID:10439464 RGD:9743942 NCBI chr14:68,321,312...68,326,544
Ensembl chr14:68,321,312...68,326,544 		JBrowse link
G Nefm neurofilament, medium polypeptide ISO RGD PMID:10439464 RGD:9743942 NCBI chr14:68,356,994...68,362,453
Ensembl chr14:68,320,039...68,362,295 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:11297510) MGI PMID:11297510 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:18477394) MGI PMID:18477394 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:9067840) DFLAT PMID:9067840 NCBI chr 6:49,799,690...49,806,487
Ensembl chr 6:49,799,690...49,806,487 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:12527005), (PMID:15950290)
(PMID:11997145), (PMID:16000615)		 MGI PMID:11997145 PMID:12527005 PMID:15950290 PMID:16000615 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 ISO RGD PMID:21056632 RGD:124713572 NCBI chr 2:56,996,845...57,014,152
Ensembl chr 2:56,996,842...57,014,015 		JBrowse link
G Nsun5 NOL1/NOP2/Sun domain family, member 5 involved_in IMP (MGI:6369928|PMID:31462248) UniProt PMID:31462248 MGI:6369928 NCBI chr 5:135,398,784...135,405,661
Ensembl chr 5:135,398,807...135,405,659 		JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 involved_in IMP (MGI:3776308|PMID:15372074) UniProt PMID:15372074 MGI:3776308 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in
acts_upstream_of_or_within		 ISO
IMP
IGI		 (PMID:11344260)
(PMID:18469343)		 MGI PMID:11344260 PMID:18469343 GO_REF:0000119 MGI:4834177 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK family member involved_in IMP (MGI:4454735|PMID:20399730) UniProt PMID:20399730 MGI:4454735 NCBI chr12:78,795,606...78,887,488
Ensembl chr12:78,795,681...78,887,488 		JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within IMP (PMID:23349049) MGI PMID:23349049 NCBI chr 4:44,524,748...44,710,694
Ensembl chr 4:44,524,757...44,710,487 		JBrowse link
G Pax6 paired box 6 involved_in IMP (PMID:30186101) MGI PMID:30186101 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in IMP (MGI:6316857|PMID:30256902) UniProt PMID:30256902 MGI:6316857 NCBI chr13:42,833,909...43,292,002
Ensembl chr13:42,834,099...43,292,002 		JBrowse link
G Plcb1 phospholipase C, beta 1 involved_in IMP (MGI:3628680|PMID:11224545) BHF-UCL PMID:11224545 MGI:3628680 NCBI chr 2:134,628,084...135,317,178
Ensembl chr 2:134,627,987...135,317,178 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B ISO RGD PMID:9275233 RGD:625590 NCBI chr11:94,882,038...94,897,724
Ensembl chr11:94,881,861...94,897,725 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IMP (PMID:16079160) MGI PMID:16079160 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IMP (PMID:15842738) MGI PMID:15842738 NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483 		JBrowse link
G Reln reelin acts_upstream_of_or_within ISO
IMP		 (PMID:21491433) RGD
MGI		 PMID:10436054 PMID:21491433 RGD:634730 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Scn2a sodium channel, voltage-gated, type II, alpha ISO RGD PMID:22473424 RGD:10411906 NCBI chr 2:65,451,108...65,597,791
Ensembl chr 2:65,451,115...65,597,791 		JBrowse link
G Slc2a1 solute carrier family 2 (facilitated glucose transporter), member 1 ISO RGD PMID:16581179 RGD:12879481 NCBI chr 4:118,966,001...118,994,527
Ensembl chr 4:118,965,908...118,995,180 		JBrowse link
G Slc2a3 solute carrier family 2 (facilitated glucose transporter), member 3 ISO RGD PMID:16581179 RGD:12879481 NCBI chr 6:122,704,783...122,779,149
Ensembl chr 6:122,704,768...122,778,599 		JBrowse link
G Slc38a2 solute carrier family 38, member 2 ISO RGD PMID:21718781 RGD:9999217 NCBI chr15:96,585,267...96,597,609
Ensembl chr15:96,585,273...96,597,611 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:23680462) MGI PMID:23680462 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IMP (PMID:15240551) MGI PMID:15240551 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr13:69,721,568...69,759,611
Ensembl chr13:69,721,568...69,759,561 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:17920017) GO_Central
MGI		 PMID:17920017 GO_REF:0000033 NCBI chr 8:25,644,568...25,730,901
Ensembl chr 8:25,644,568...25,746,604 		JBrowse link
G Tacc2 transforming, acidic coiled-coil containing protein 2 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:17920017) GO_Central
MGI		 PMID:17920017 GO_REF:0000033 NCBI chr 7:130,154,735...130,369,435
Ensembl chr 7:130,179,168...130,366,515 		JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:17920017) MGI
GO_Central		 PMID:17920017 GO_REF:0000033 NCBI chr 5:33,814,808...33,836,331
Ensembl chr 5:33,815,472...33,836,339 		JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in ISO
IMP		 (PMID:30186101) RGD
MGI		 PMID:10749215 PMID:30186101 RGD:11576295 NCBI chr 2:61,633,228...61,644,458
Ensembl chr 2:61,633,274...61,644,458 		JBrowse link
G Tfap2c transcription factor AP-2, gamma acts_upstream_of_or_within IMP (PMID:19749747) MGI PMID:19749747 NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542 		JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:21295554 RGD:5128671 NCBI chr 7:142,446,516...142,453,732
Ensembl chr 7:142,446,489...142,484,865 		JBrowse link
G Trappc9 trafficking protein particle complex 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:72,461,469...72,933,086
Ensembl chr15:72,461,469...72,933,053 		JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within IMP (PMID:17522300) MGI PMID:17522300 NCBI chr 2:28,531,005...28,581,183
Ensembl chr 2:28,531,240...28,581,179 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in IMP (PMID:22101068)
(PMID:31386652)		 MGI PMID:22101068 PMID:31386652 NCBI chr15:98,847,728...98,851,382
Ensembl chr15:98,847,718...98,851,584 		JBrowse link
G Tubb2a tubulin, beta 2A class IIA involved_in IMP (PMID:31386652) MGI PMID:31386652 NCBI chr13:34,258,261...34,261,991
Ensembl chr13:34,258,257...34,261,990 		JBrowse link
G Tubb2b tubulin, beta 2B class IIB involved_in IMP (PMID:31386652) MGI PMID:31386652 NCBI chr13:34,310,991...34,314,337
Ensembl chr13:34,310,731...34,314,449 		JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:34235142) MGI PMID:34235142 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:20368265 RGD:2324624 NCBI chr19:27,190,070...27,231,631
Ensembl chr19:27,193,884...27,231,631 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 3:108,498,302...108,553,035
Ensembl chr 3:108,498,595...108,553,035 		JBrowse link
G Wdr62 WD repeat domain 62 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:29,939,563...29,980,243
Ensembl chr 7:29,939,563...29,979,844 		JBrowse link
G Xab2 XPA binding protein 2 ISO RGD PMID:12801913 RGD:634609 NCBI chr 8:3,660,089...3,671,311
Ensembl chr 8:3,658,421...3,671,316 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide acts_upstream_of_or_within IMP (PMID:12796778) MGI PMID:12796778 NCBI chr11:75,620,121...75,656,667
Ensembl chr11:75,623,695...75,656,671 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within IMP (PMID:19409883) MGI PMID:19409883 NCBI chr 1:177,269,892...177,278,330
Ensembl chr 1:177,269,917...177,278,330 		JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chr14:66,370,685...66,390,397
Ensembl chr14:66,372,488...66,390,397 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IGI (PMID:23258346) MGI PMID:23258346 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within IGI (PMID:23258346) MGI PMID:23258346 NCBI chr11:120,612,294...120,614,795
Ensembl chr11:120,612,296...120,614,795 		JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISO (PMID:12050665) UniProt PMID:12050665 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within IGI (PMID:15028753) MGI PMID:15028753 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IGI (PMID:15028753) MGI PMID:15028753 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:18786356)
(PMID:15028753)		 MGI PMID:15028753 PMID:18786356 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within IGI (PMID:17678855) MGI PMID:17678855 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IGI (PMID:17678855) MGI PMID:17678855 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within IMP (PMID:17460091) MGI PMID:17460091 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963 		JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within IMP (PMID:11714688) MGI PMID:11714688 NCBI chr 1:132,437,163...132,470,989
Ensembl chr 1:132,437,165...132,470,994 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within IMP (PMID:17409246) MGI PMID:17409246 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724 		JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within IMP (PMID:17409246) MGI PMID:17409246 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within IMP (PMID:21338885) MGI PMID:21338885 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669 		JBrowse link
G Lhx6 LIM homeobox protein 6 acts_upstream_of_or_within IMP (PMID:17376969) MGI PMID:17376969 NCBI chr 2:35,971,962...35,996,004
Ensembl chr 2:35,971,965...35,995,420 		JBrowse link
cerebral cortex neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd5 chromodomain helicase DNA binding protein 5 involved_in IMP (MGI:5532595|PMID:23948251) UniProt PMID:23948251 MGI:5532595 NCBI chr 4:152,423,103...152,474,651
Ensembl chr 4:152,423,108...152,474,651 		JBrowse link
G D16Ertd472e DNA segment, Chr 16, ERATO Doi 472, expressed involved_in IMP (MGI:5908509|PMID:27404227) UniProt PMID:27404227 MGI:5908509 NCBI chr16:78,337,224...78,373,576
Ensembl chr16:78,337,226...78,373,596 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 acts_upstream_of_or_within IDA (PMID:32245946) MGI PMID:32245946 NCBI chr 4:110,060,934...110,209,127
Ensembl chr 4:110,060,919...110,209,106 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within IGI (PMID:23178126) MGI PMID:23178126 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Eomes eomesodermin involved_in IDA (MGI:3831469|PMID:18940588) UniProt PMID:18940588 MGI:3831469 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within IMP (PMID:21338885) MGI PMID:21338885 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669 		JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within IMP (PMID:22951639) MGI PMID:22951639 NCBI chr 7:99,027,976...99,111,082
Ensembl chr 7:99,030,621...99,111,084 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IMP (PMID:11297820) MGI PMID:11297820 NCBI chr  X:52,076,955...52,110,537
Ensembl chr  X:52,077,014...52,110,536 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:15469968) MGI PMID:15469968 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Lhx6 LIM homeobox protein 6 acts_upstream_of_or_within IGI (PMID:18339674) MGI PMID:18339674 NCBI chr 2:35,971,962...35,996,004
Ensembl chr 2:35,971,965...35,995,420 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:18339674) MGI PMID:18339674 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:12902391), (PMID:15950290) MGI PMID:12902391 PMID:15950290 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:97,597,886...97,934,691
Ensembl chr  X:97,597,883...97,934,631 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in ISO RGD
MGI		 PMID:16144905 GO_REF:0000096 MGI:4417868 RGD:1601501 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within IMP (PMID:9288097) MGI PMID:9288097 NCBI chr 6:124,373,774...124,392,878
Ensembl chr 6:124,373,775...124,392,026 		JBrowse link
G Sin3a transcriptional regulator, SIN3A (yeast) involved_in IMP (MGI:6152283|PMID:27399968) UniProt PMID:27399968 MGI:6152283 NCBI chr 9:56,979,271...57,035,652
Ensembl chr 9:56,979,324...57,035,650 		JBrowse link
G Tox thymocyte selection-associated high mobility group box involved_in IMP (MGI:5632052|PMID:25527292) UniProt PMID:25527292 MGI:5632052 NCBI chr 4:6,686,353...6,991,557
Ensembl chr 4:6,686,353...6,991,557 		JBrowse link
G Zfp335 zinc finger protein 335 acts_upstream_of_or_within IMP
IGI		 (PMID:23178126) MGI PMID:23178126 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677 		JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IMP (MGI:3796260|PMID:18509043) UniProt PMID:18509043 MGI:3796260 NCBI chr 8:95,701,321...95,740,836
Ensembl chr 8:95,701,379...95,740,845 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:9232833) MGI PMID:9232833 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G P2ry12 purinergic receptor P2Y, G-protein coupled 12 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:59,123,692...59,170,408
Ensembl chr 3:59,123,693...59,170,292 		JBrowse link
G Rtn4 reticulon 4 involved_in IMP (MGI:4461842|PMID:20093372) UniProt PMID:20093372 MGI:4461842 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 3:108,498,302...108,553,035
Ensembl chr 3:108,498,595...108,553,035 		JBrowse link
cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc141 coiled-coil domain containing 141 acts_upstream_of_or_within IMP (PMID:20956536) MGI PMID:20956536 NCBI chr 2:76,840,246...77,006,424
Ensembl chr 2:76,840,246...77,000,980 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010 		JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within IMP (PMID:24210661) MGI PMID:24210661 NCBI chr 9:53,525,881...53,578,807
Ensembl chr 9:53,525,882...53,581,314 		JBrowse link
G Dab1 disabled 1 acts_upstream_of_or_within
involved_in		 ISO
IGI
IMP		 (PMID:24210661)
(PMID:9338785)		 RGD
MGI		 PMID:9338785 PMID:18160654 PMID:24210661 GO_REF:0000096 MGI:4417868 RGD:2324689 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Disc1 disrupted in schizophrenia 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 8:125,773,928...125,991,882
Ensembl chr 8:125,780,934...125,988,597 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817 		JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within IMP (PMID:19398581) MGI PMID:19398581 NCBI chr16:32,048,930...32,065,843
Ensembl chr16:32,048,930...32,065,976 		JBrowse link
G Fut10 fucosyltransferase 10 acts_upstream_of_or_within IMP (PMID:23986452) MGI PMID:23986452 NCBI chr 8:31,677,342...31,757,310
Ensembl chr 8:31,677,359...31,751,766 		JBrowse link
G Lhx6 LIM homeobox protein 6 acts_upstream_of_or_within IMP (PMID:17376969) MGI PMID:17376969 NCBI chr 2:35,971,962...35,996,004
Ensembl chr 2:35,971,965...35,995,420 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within IMP (PMID:21104742) MGI PMID:21104742 NCBI chr17:30,046,930...30,107,557
Ensembl chr17:30,046,923...30,189,061 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr11:68,712,260...68,743,961
Ensembl chr11:68,712,260...68,762,684 		JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 acts_upstream_of_or_within IGI (PMID:12130536) MGI PMID:12130536 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366 		JBrowse link
G Pou3f3 POU domain, class 3, transcription factor 3 acts_upstream_of_or_within IGI (PMID:12130536) MGI PMID:12130536 NCBI chr 1:42,734,928...42,739,370
Ensembl chr 1:42,734,085...42,742,336 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:17409253) MGI PMID:17409253 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within IGI
IMP		 (PMID:24210661) MGI PMID:24210661 NCBI chr 9:96,352,990...96,360,728
Ensembl chr 9:96,352,990...96,360,728 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within IMP (PMID:24210661) MGI PMID:24210661 NCBI chr11:97,253,044...97,289,368
Ensembl chr11:97,253,261...97,289,368 		JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 acts_upstream_of_or_within IMP (PMID:24531968) MGI PMID:24531968 NCBI chr 8:95,701,321...95,740,836
Ensembl chr 8:95,701,379...95,740,845 		JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IMP (PMID:23431145) MGI PMID:23431145 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681 		JBrowse link
G Dmrta2 doublesex and mab-3 related transcription factor like family A2 acts_upstream_of_or_within IMP (PMID:23056351)
(PMID:22923088)		 MGI PMID:22923088 PMID:23056351 NCBI chr 4:109,835,222...109,840,896
Ensembl chr 4:109,835,250...109,840,884 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within IGI (PMID:15147765) MGI PMID:15147765 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within IGI
IMP		 (PMID:15147765)
(PMID:12764040)		 MGI PMID:12764040 PMID:15147765 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within
involved_in		 IMP (PMID:23431145)
(PMID:30186101)		 MGI PMID:23431145 PMID:30186101 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200 		JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 acts_upstream_of_or_within IMP (PMID:17828260) MGI PMID:17828260 NCBI chr13:78,337,090...78,346,954
Ensembl chr13:78,337,092...78,347,876 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IMP (PMID:30186101)
(PMID:23431145)
(PMID:12764040)		 MGI PMID:12764040 PMID:23431145 PMID:30186101 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Tra2b transformer 2 beta acts_upstream_of_or_within IMP (PMID:24586484) MGI PMID:24586484 NCBI chr16:22,063,302...22,084,755
Ensembl chr16:22,063,299...22,084,755 		JBrowse link
cerebral cortex tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within IMP (PMID:17460091) MGI PMID:17460091 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963 		JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within IMP (PMID:19398581) MGI PMID:19398581 NCBI chr16:32,048,930...32,065,843
Ensembl chr16:32,048,930...32,065,976 		JBrowse link
G Lhx6 LIM homeobox protein 6 acts_upstream_of_or_within IMP (PMID:17376969) MGI PMID:17376969 NCBI chr 2:35,971,962...35,996,004
Ensembl chr 2:35,971,965...35,995,420 		JBrowse link
G Reln reelin acts_upstream_of_or_within IMP (PMID:16901480) MGI PMID:16901480 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr19:41,586,263...41,735,714
Ensembl chr19:41,588,696...41,732,104 		JBrowse link
G Slit2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
G Slit3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr11:35,012,283...35,599,334
Ensembl chr11:35,012,051...35,599,334 		JBrowse link
chemorepulsion involved in interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrg1 neuregulin 1 acts_upstream_of_or_within IMP (PMID:22376909) MGI PMID:22376909 NCBI chr 8:32,299,493...33,381,858
Ensembl chr 8:32,304,579...33,374,825
Ensembl chr 8:32,304,579...33,374,825 		JBrowse link
G Nrg3 neuregulin 3 acts_upstream_of_or_within IMP (PMID:22376909) MGI PMID:22376909 NCBI chr14:38,086,093...39,195,045
Ensembl chr14:38,090,909...39,195,045 		JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (PMID:11027399) MGI PMID:11027399 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Scrib scribbled planar cell polarity acts_upstream_of_or_within IGI (PMID:20215345) MGI PMID:20215345 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP
IGI		 (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Slc4a7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 acts_upstream_of_or_within IMP (PMID:12808454) MGI PMID:12808454 NCBI chr14:7,669,819...7,766,808
Ensembl chr14:7,669,823...7,767,484 		JBrowse link
commissural neuron differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Draxin dorsal inhibitory axon guidance protein involved_in IMP
IBA		 (MGI:3832346|PMID:19150847) UniProt
GO_Central		 PMID:19150847 GO_REF:0000033 MGI:3832346 NCBI chr 4:148,182,894...148,215,582
Ensembl chr 4:148,182,894...148,215,155 		JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:22991444) MGI PMID:22991444 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Bcl11b B cell leukemia/lymphoma 11B acts_upstream_of_or_within IGI (PMID:23144223) MGI PMID:23144223 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within IMP (PMID:21338885) MGI PMID:21338885 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:22991444) MGI PMID:22991444 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:11124115) MGI PMID:11124115 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:23144223) GO_Central
MGI		 PMID:23144223 GO_REF:0000033 NCBI chr 2:61,633,228...61,644,458
Ensembl chr 2:61,633,274...61,644,458 		JBrowse link
corpus callosum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16 like 1 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 1:87,683,730...87,720,150
Ensembl chr 1:87,683,592...87,720,150 		JBrowse link
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:18032654) MGI PMID:18032654 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Coro1c coronin, actin binding protein 1C acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 5:113,980,500...114,046,767
Ensembl chr 5:113,980,497...114,046,819 		JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:22473424 RGD:10411906 NCBI chr18:71,386,703...72,484,299
Ensembl chr18:71,386,705...72,484,140 		JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 9:54,272,442...54,409,150
Ensembl chr 9:54,272,442...54,408,910 		JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP (MGI:84499|PMID:8947026) UniProt PMID:8947026 MGI:84499 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299 		JBrowse link
G Ephb3 Eph receptor B3 involved_in IMP (MGI:84499|PMID:8947026) UniProt PMID:8947026 MGI:84499 NCBI chr16:21,023,530...21,042,054
Ensembl chr16:21,023,505...21,042,055 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 9:66,257,694...66,416,057
Ensembl chr 9:66,257,732...66,416,057 		JBrowse link
G Kcna1 potassium voltage-gated channel, shaker-related subfamily, member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:126,613,426...126,622,764
Ensembl chr 6:126,617,360...126,623,347 		JBrowse link
G Kcna2 potassium voltage-gated channel, shaker-related subfamily, member 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 3:106,998,203...107,022,321
Ensembl chr 3:107,008,462...107,022,321 		JBrowse link
G Kcna3 potassium voltage-gated channel, shaker-related subfamily, member 3 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 3:106,943,486...106,947,223
Ensembl chr 3:106,943,485...106,945,386 		JBrowse link
G Kcnc1 potassium voltage gated channel, Shaw-related subfamily, member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 7:46,045,643...46,088,130
Ensembl chr 7:46,045,921...46,088,128 		JBrowse link
G Kcnc3 potassium voltage gated channel, Shaw-related subfamily, member 3 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 7:44,236,405...44,254,175
Ensembl chr 7:44,240,088...44,254,178 		JBrowse link
G Kcnc4 potassium voltage gated channel, Shaw-related subfamily, member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 3:107,345,614...107,367,617
Ensembl chr 3:107,345,619...107,366,868 		JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 1:136,059,128...136,105,739
Ensembl chr 1:136,059,127...136,105,736 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chr 4:58,435,252...58,554,601
Ensembl chr 4:58,435,255...58,553,898 		JBrowse link
G Nsun5 NOL1/NOP2/Sun domain family, member 5 involved_in IMP (MGI:6359541|PMID:31174389) UniProt PMID:31174389 MGI:6359541 NCBI chr 5:135,398,784...135,405,661
Ensembl chr 5:135,398,807...135,405,659 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IMP (PMID:15842738) MGI PMID:15842738 NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17558409) MGI PMID:17558409 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Rtn4r reticulon 4 receptor involved_in IMP (MGI:5824191|PMID:27339102) UniProt PMID:27339102 MGI:5824191 NCBI chr16:17,945,506...17,970,272
Ensembl chr16:17,945,506...17,970,272 		JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 involved_in IMP (MGI:5824191|PMID:27339102) UniProt PMID:27339102 MGI:5824191 NCBI chr11:75,084,819...75,158,595
Ensembl chr11:75,084,609...75,158,595 		JBrowse link
G Rtn4rl2 reticulon 4 receptor-like 2 involved_in IMP (MGI:5824191|PMID:27339102) UniProt PMID:27339102 MGI:5824191 NCBI chr 2:84,701,653...84,718,985
Ensembl chr 2:84,702,268...84,717,054 		JBrowse link
G Ryk receptor-like tyrosine kinase involved_in IMP (MGI:3625635|PMID:16723543) UniProt PMID:16723543 MGI:3625635 NCBI chr 9:102,712,119...102,785,506
Ensembl chr 9:102,712,116...102,785,504 		JBrowse link
G Scn2a sodium channel, voltage-gated, type II, alpha ISO RGD PMID:22473424 RGD:10411906 NCBI chr 2:65,451,108...65,597,791
Ensembl chr 2:65,451,115...65,597,791 		JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:24284070) MGI PMID:24284070 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
G Wdr37 WD repeat domain 37 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr13:8,853,002...8,922,136
Ensembl chr13:8,853,004...8,921,945 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 3:108,498,302...108,553,035
Ensembl chr 3:108,498,595...108,553,035 		JBrowse link
G Wdr89 WD repeat domain 89 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr12:75,677,368...75,716,311
Ensembl chr12:75,677,370...75,716,311 		JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681 		JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:124,716,146...124,718,032
Ensembl chr 6:124,716,146...124,718,337 		JBrowse link
G Nin ninein acts_upstream_of_or_within IGI (PMID:25741725) MGI PMID:25741725 NCBI chr12:70,058,209...70,160,575
Ensembl chr12:70,058,209...70,160,491 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Prdm8 PR domain containing 8 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 5:98,315,241...98,335,313
Ensembl chr 5:98,315,057...98,336,850 		JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:118,219,937...118,266,483
Ensembl chr 4:118,219,940...118,266,470 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within IMP (PMID:21055390) MGI PMID:21055390 NCBI chr 7:97,999,875...98,010,602
Ensembl chr 7:97,999,875...98,010,535 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IMP (PMID:25741725) MGI PMID:25741725 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407 		JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1b sodium channel, voltage-gated, type I, beta acts_upstream_of_or_within IMP (PMID:18354028) MGI PMID:18354028 NCBI chr 7:30,815,949...30,826,436
Ensembl chr 7:30,815,949...30,826,428 		JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit2 slit guidance ligand 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
corticospinal tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IGI
IMP		 (PMID:22284184) MGI PMID:22284184 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681 		JBrowse link
G Cdh11 cadherin 11 acts_upstream_of_or_within IGI (PMID:22284184) MGI PMID:22284184 NCBI chr 8:103,358,727...103,512,125
Ensembl chr 8:103,358,727...103,512,274 		JBrowse link
G Epha4 Eph receptor A4 involved_in IMP (MGI:1306963|PMID:9789074) UniProt PMID:9789074 MGI:1306963 NCBI chr 1:77,343,819...77,491,763
Ensembl chr 1:77,343,822...77,491,725 		JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within IMP (PMID:19398581) MGI PMID:19398581 NCBI chr16:32,048,930...32,065,843
Ensembl chr16:32,048,930...32,065,976 		JBrowse link
G Nin ninein acts_upstream_of_or_within IGI (PMID:25741725) MGI PMID:25741725 NCBI chr12:70,058,209...70,160,575
Ensembl chr12:70,058,209...70,160,491 		JBrowse link
G Prdm8 PR domain containing 8 acts_upstream_of_or_within IMP (PMID:22284184) MGI PMID:22284184 NCBI chr 5:98,315,241...98,335,313
Ensembl chr 5:98,315,057...98,336,850 		JBrowse link
G Spg11 SPG11, spatacsin vesicle trafficking associated acts_upstream_of_or_within IMP (PMID:28237315) MGI PMID:28237315 NCBI chr 2:121,884,001...121,949,915
Ensembl chr 2:121,884,001...121,948,867 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IMP (PMID:25741725) MGI PMID:25741725 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407 		JBrowse link
corticotropin hormone secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IDA (PMID:9463347) MGI PMID:9463347 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within IDA (PMID:9463347) MGI PMID:9463347 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IDA (PMID:9463347) MGI PMID:9463347 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
dentate gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 acts_upstream_of_or_within IMP (PMID:23720746) MGI PMID:23720746 NCBI chr17:36,208,487...36,220,971
Ensembl chr17:36,208,487...36,220,967 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin acts_upstream_of_or_within IMP (PMID:30498428) MGI PMID:30498428 NCBI chr 2:122,580,425...122,591,407
Ensembl chr 2:122,580,423...122,591,395 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IMP (PMID:20020054) MGI PMID:20020054 NCBI chr 1:134,002,603...134,006,893
Ensembl chr 1:134,002,908...134,006,858 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO RGD
MGI		 PMID:33450391 GO_REF:0000096 MGI:4417868 RGD:126781687 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within IMP (PMID:17360497) MGI PMID:17360497 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within IMP (PMID:10729342) MGI PMID:10729342 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within IMP (PMID:16971467) MGI PMID:16971467 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IMP (MGI:5904238|PMID:28204491) UniProt PMID:28204491 MGI:5904238 NCBI chr 3:34,074,133...34,124,129
Ensembl chr 3:34,074,092...34,124,471 		JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in IMP (MGI:5141571|PMID:21658585) UniProt PMID:21658585 MGI:5141571 NCBI chr11:69,523,788...69,544,123
Ensembl chr11:69,523,816...69,544,123 		JBrowse link
G Kcnq2 potassium voltage-gated channel, subfamily Q, member 2 acts_upstream_of_or_within IGI (PMID:16464983) MGI PMID:16464983 NCBI chr 2:180,717,372...180,777,368
Ensembl chr 2:180,717,372...180,777,093 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within IMP (PMID:18297065) MGI PMID:18297065 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP (PMID:21970971) MGI PMID:21970971 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IMP (PMID:10631168) MGI PMID:10631168 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IMP (PMID:1638738) MGI PMID:1638738 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310 		JBrowse link
G Mdk midkine involved_in IEP (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chr 2:91,760,149...91,762,348
Ensembl chr 2:91,760,150...91,762,642 		JBrowse link
G Mef2c myocyte enhancer factor 2C ISO RGD PMID:18949272 RGD:5131610 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Neurod1 neurogenic differentiation 1 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:1352314|PMID:10639171), (MGI:2159022|PMID:10398678)
(PMID:10804213)		 UniProt
MGI		 PMID:10398678 PMID:10639171 PMID:10804213 MGI:1352314 MGI:2159022 NCBI chr 2:79,282,981...79,286,980
Ensembl chr 2:79,282,865...79,287,095 		JBrowse link
G Neurod6 neurogenic differentiation 6 acts_upstream_of_or_within IGI (PMID:10804213) MGI PMID:10804213 NCBI chr 6:55,654,803...55,658,248
Ensembl chr 6:55,654,807...55,658,248 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:17953618)
(PMID:12527005)		 MGI PMID:12527005 PMID:17953618 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Pianp PILR alpha associated neural protein acts_upstream_of_or_within IMP (PMID:31511635) MGI PMID:31511635 NCBI chr 6:124,973,683...124,980,059
Ensembl chr 6:124,973,657...124,980,059 		JBrowse link
G Pomgnt1 protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase acts_upstream_of_or_within IMP (PMID:21970971) MGI PMID:21970971 NCBI chr 4:116,007,700...116,017,041
Ensembl chr 4:115,981,037...116,017,046 		JBrowse link
G Pomt2 protein-O-mannosyltransferase 2 acts_upstream_of_or_within IMP (PMID:21970971) MGI PMID:21970971 NCBI chr12:87,153,635...87,194,742
Ensembl chr12:87,153,635...87,194,742 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:4849596 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3759727|PMID:17706614) CACAO PMID:17706614 MGI:3759727 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Reln reelin involved_in ISO RGD
MGI		 PMID:15459104 GO_REF:0000096 MGI:4417868 RGD:2317799 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Scn2a sodium channel, voltage-gated, type II, alpha acts_upstream_of_or_within IGI (PMID:16464983) MGI PMID:16464983 NCBI chr 2:65,451,108...65,597,791
Ensembl chr 2:65,451,115...65,597,791 		JBrowse link
G Sct secretin acts_upstream_of_or_within IMP (PMID:21159798) MGI PMID:21159798 NCBI chr 7:140,858,243...140,859,082
Ensembl chr 7:140,858,243...140,859,046 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:18297065) MGI PMID:18297065 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Tmem108 transmembrane protein 108 involved_in IMP (MGI:5825380|PMID:28096412) UniProt PMID:28096412 MGI:5825380 NCBI chr 9:103,360,135...103,639,099
Ensembl chr 9:103,360,146...103,639,036 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in IMP (PMID:21041996) MGI PMID:21041996 NCBI chr15:98,847,728...98,851,382
Ensembl chr15:98,847,718...98,851,584 		JBrowse link
G Vps13b vacuolar protein sorting 13B acts_upstream_of_or_within IMP (PMID:37573958) MGI PMID:37573958 NCBI chr15:35,371,264...35,931,375
Ensembl chr15:35,371,306...35,931,375 		JBrowse link
diencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema5a sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:32,244,959...32,696,487
Ensembl chr15:32,244,956...32,696,487 		JBrowse link
G Six3 sine oculis-related homeobox 3 acts_upstream_of_or_within IGI (PMID:18094027) MGI PMID:18094027 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IGI (PMID:18094027) MGI PMID:18094027 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
diencephalon morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within IGI (PMID:20816794) MGI PMID:20816794 NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IGI (PMID:20816794) MGI PMID:20816794 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IMP (PMID:15240551) MGI PMID:15240551 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
dorsal spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daam2 dishevelled associated activator of morphogenesis 2 involved_in IMP (MGI:6114828|PMID:22227309) UniProt PMID:22227309 MGI:6114828 NCBI chr17:49,763,050...49,871,517
Ensembl chr17:49,763,050...49,871,371 		JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IMP
IBA		 (MGI:3832346|PMID:19150847) UniProt
GO_Central		 PMID:19150847 GO_REF:0000033 MGI:3832346 NCBI chr 4:148,182,894...148,215,582
Ensembl chr 4:148,182,894...148,215,155 		JBrowse link
G Drgx dorsal root ganglia homeobox acts_upstream_of_or_within IMP (PMID:16978876) MGI PMID:16978876 NCBI chr14:32,317,824...32,371,203
Ensembl chr14:32,321,364...32,371,203 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor involved_in IMP (MGI:5440338|PMID:22998873) ARUK-UCL PMID:22998873 MGI:5440338 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Hoxb8 homeobox B8 acts_upstream_of_or_within IMP (PMID:10559485), (PMID:18430798) MGI PMID:10559485 PMID:18430798 NCBI chr11:96,170,227...96,176,151
Ensembl chr11:96,172,731...96,176,141 		JBrowse link
G Pbx3 pre B cell leukemia homeobox 3 acts_upstream_of_or_within IMP (PMID:18155191) MGI PMID:18155191 NCBI chr 2:34,061,469...34,264,168
Ensembl chr 2:34,061,469...34,263,154 		JBrowse link
G Uncx UNC homeobox acts_upstream_of_or_within IMP (PMID:10804169)
(PMID:10804168)		 MGI PMID:10804168 PMID:10804169 NCBI chr 5:139,529,620...139,533,934
Ensembl chr 5:139,529,249...139,533,934 		JBrowse link
efferent axon development in a lateral line nerve term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within IMP (PMID:12885554) MGI PMID:12885554 NCBI chr 5:67,251,751...67,256,399
Ensembl chr 5:67,251,742...67,256,644 		JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within IMP (PMID:15677725) MGI PMID:15677725 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:17409253) MGI PMID:17409253 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP-binding cassette, sub-family B member 1A ISO RGD PMID:22049154 RGD:8657330 NCBI chr 5:8,617,091...8,798,575
Ensembl chr 5:8,710,077...8,798,575 		JBrowse link
G Bpgm 2,3-bisphosphoglycerate mutase acts_upstream_of_or_within IMP (PMID:32966787) MGI PMID:32966787 NCBI chr 6:34,453,291...34,482,071
Ensembl chr 6:34,453,142...34,482,548 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:25083995) MGI PMID:25083995 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within IMP
IGI		 (PMID:23217714)
(PMID:30478038)		 MGI PMID:23217714 PMID:30478038 NCBI chr 7:89,053,574...89,062,341
Ensembl chr 7:89,053,563...89,062,342 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IMP (PMID:25083995) MGI PMID:25083995 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:25083995) MGI PMID:25083995 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in IMP
IBA		 (MGI:5700280|PMID:25753034) UniProt
GO_Central		 PMID:25753034 GO_REF:0000033 MGI:5700280 NCBI chr 7:30,657,195...30,672,894
Ensembl chr 7:30,657,195...30,672,889 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid NOT|involved_in IMP (MGI:5789479|PMID:27008858)
(MGI:5571503|PMID:24828040)		 ARUK-UCL
UniProt		 PMID:24828040 PMID:27008858 MGI:5571503 MGI:5789479 NCBI chr 4:122,840,643...122,855,844
Ensembl chr 4:122,840,643...122,854,981 		JBrowse link
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IMP
IGI		 (PMID:23217714)
(PMID:30478038)		 MGI PMID:23217714 PMID:30478038 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013 		JBrowse link
G Vps4b vacuolar protein sorting 4B acts_upstream_of_or_within IMP (PMID:28675177) MGI PMID:28675177 NCBI chr 1:106,698,518...106,724,455
Ensembl chr 1:106,691,801...106,724,458 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IGI (PMID:30478038) MGI PMID:30478038 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
establishment of endothelial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1b ATP-binding cassette, sub-family B member 1B involved_in ISO RGD
MGI		 PMID:16850390 GO_REF:0000096 MGI:4417868 RGD:1598561 NCBI chr 5:8,848,147...8,916,314
Ensembl chr 5:8,848,147...8,916,315 		JBrowse link
G Cldn3 claudin 3 involved_in IMP (MGI:6368952|PMID:12734665) ARUK-UCL PMID:12734665 MGI:6368952 NCBI chr 5:135,015,068...135,016,330
Ensembl chr 5:135,015,068...135,016,326 		JBrowse link
G Foxp3 forkhead box P3 ISO RGD PMID:31027862 RGD:38549575 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
establishment of glial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin, muscular dystrophy acts_upstream_of_or_within IMP (PMID:12673830) MGI PMID:12673830 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747 		JBrowse link
G Mxra8 matrix-remodelling associated 8 involved_in IEP (MGI:5554369|PMID:14603461) UniProt PMID:14603461 MGI:5554369 NCBI chr 4:155,924,137...155,928,559
Ensembl chr 4:155,924,137...155,928,545 		JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IMP (MGI:4366584|PMID:19737524) UniProt PMID:19737524 MGI:4366584 NCBI chr 1:131,212,989...131,455,269
Ensembl chr 1:131,212,989...131,455,090 		JBrowse link
facial nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor ISO RGD PMID:15356205 RGD:1580344 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
facial nerve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase, RNA-specific, B1 acts_upstream_of_or_within IMP (PMID:20826656) MGI PMID:20826656 NCBI chr10:77,126,561...77,254,125
Ensembl chr10:77,126,560...77,254,104 		JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within IMP (PMID:15814794) MGI PMID:15814794 NCBI chr 6:32,121,478...32,565,127
Ensembl chr 6:32,121,203...32,565,127 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IMP (PMID:12874121) MGI PMID:12874121 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
facial nerve structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:1331140|PMID:10068633), (MGI:69122|PMID:7935840)
(PMID:9806922)		 UniProt
MGI		 PMID:7935840 PMID:9806922 PMID:10068633 MGI:1331140 MGI:69122 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within IGI (PMID:9806922) MGI PMID:9806922 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Hoxb1 homeobox B1 acts_upstream_of_or_within IMP (PMID:8898234) MGI PMID:8898234 NCBI chr11:96,256,547...96,259,082
Ensembl chr11:96,256,578...96,259,082 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within IMP (PMID:9012503) MGI PMID:9012503 NCBI chr11:96,242,458...96,244,846
Ensembl chr11:96,241,351...96,244,838 		JBrowse link
G Nrp1 neuropilin 1 involved_in IMP (MGI:3788968|PMID:18356247), (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18356247 PMID:18804103 MGI:3788968 MGI:3822054 NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844 		JBrowse link
G Nrp2 neuropilin 2 involved_in IMP (MGI:3788968|PMID:18356247) ParkinsonsUK-UCL PMID:18356247 MGI:3788968 NCBI chr 1:62,742,476...62,857,851
Ensembl chr 1:62,742,444...62,857,854 		JBrowse link
G Plxna3 plexin A3 involved_in IMP (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:3822054 NCBI chr  X:73,372,644...73,388,295
Ensembl chr  X:73,372,672...73,388,295 		JBrowse link
G Plxna4 plexin A4 involved_in IMP (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:3822054 NCBI chr 6:32,121,478...32,565,127
Ensembl chr 6:32,121,203...32,565,127 		JBrowse link
G Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A involved_in IMP (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:3822054 NCBI chr 5:13,174,789...13,653,453
Ensembl chr 5:13,175,381...13,652,533 		JBrowse link
G Sema3f sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F involved_in IMP (MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:3822054 NCBI chr 9:107,558,698...107,587,674
Ensembl chr 9:107,558,699...107,587,674 		JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IMP (PMID:21533046) MGI PMID:21533046 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within IMP (PMID:8102800) MGI PMID:8102800 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Hoxb1 homeobox B1 acts_upstream_of_or_within IMP (PMID:8898234) MGI PMID:8898234 NCBI chr11:96,256,547...96,259,082
Ensembl chr11:96,256,578...96,259,082 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 involved_in IMP (MGI:4452541|PMID:20410112) UniProt PMID:20410112 MGI:4452541 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in IMP (MGI:4452541|PMID:20410112) UniProt PMID:20410112 MGI:4452541 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
floor plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk20 cyclin dependent kinase 20 acts_upstream_of_or_within IMP (PMID:28817564) MGI PMID:28817564 NCBI chr13:64,580,133...64,587,536
Ensembl chr13:64,580,128...64,589,587 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within IMP (PMID:23351563) MGI PMID:23351563 NCBI chr16:3,725,058...3,760,163
Ensembl chr16:3,726,665...3,759,011 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:9636069), (PMID:9655799) MGI PMID:9636069 PMID:9655799 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within IGI (PMID:16971467) MGI PMID:16971467 NCBI chr 6:23,245,043...23,250,942
Ensembl chr 6:23,245,043...23,248,361 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within IGI (PMID:16971467) MGI PMID:16971467 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669 		JBrowse link
G Six3 sine oculis-related homeobox 3 acts_upstream_of_or_within IMP
IGI		 (PMID:18094027) MGI PMID:18094027 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IGI (PMID:18094027) MGI PMID:18094027 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
forebrain astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kras Kirsten rat sarcoma viral oncogene homolog acts_upstream_of_or_within IMP (PMID:22577135) MGI PMID:22577135 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:15944386) MGI PMID:15944386 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 acts_upstream_of_or_within IMP (PMID:8543156) MGI PMID:8543156 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366 		JBrowse link
forebrain cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:18787040) MGI PMID:18787040 NCBI chr 7:25,455,925...25,488,502
Ensembl chr 7:25,456,698...25,488,130 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within IMP (PMID:10729342) MGI PMID:10729342 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase 3 acts_upstream_of_or_within IGI (PMID:18787040) MGI PMID:18787040 NCBI chr 2:119,628,123...119,648,585
Ensembl chr 2:119,628,214...119,648,585 		JBrowse link
forebrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (PMID:16368932) MGI PMID:16368932 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within IMP (PMID:9216040) MGI PMID:9216040 NCBI chr10:90,825,173...90,918,688
Ensembl chr10:90,825,173...90,918,632 		JBrowse link
G Aplp1 amyloid beta precursor like protein 1 acts_upstream_of_or_within IGI (PMID:15385965) MGI PMID:15385965 NCBI chr 7:30,134,405...30,144,960
Ensembl chr 7:30,134,407...30,144,960 		JBrowse link
G Aplp2 amyloid beta precursor-like protein 2 acts_upstream_of_or_within IGI (PMID:15385965)
(PMID:15689559)		 MGI PMID:15385965 PMID:15689559 NCBI chr 9:31,060,853...31,123,144
Ensembl chr 9:31,060,853...31,123,111 		JBrowse link
G App amyloid beta precursor protein acts_upstream_of_or_within IMP
IGI		 (PMID:8001115)
(PMID:15385965)
(PMID:10200318)		 MGI PMID:8001115 PMID:10200318 PMID:15385965 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654 		JBrowse link
G Arhgap35 Rho GTPase activating protein 35 acts_upstream_of_or_within IMP (PMID:11044403) MGI PMID:11044403 NCBI chr 7:16,228,398...16,349,313
Ensembl chr 7:16,227,644...16,348,918 		JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within IMP (PMID:23129809) MGI PMID:23129809 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Arx aristaless related homeobox acts_upstream_of_or_within IMP (PMID:12379852) MGI PMID:12379852 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963 		JBrowse link
G Atrx ATRX, chromatin remodeler acts_upstream_of_or_within IMP (PMID:15668733) MGI PMID:15668733 NCBI chr  X:104,841,221...104,972,978
Ensembl chr  X:104,841,221...104,973,009 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP
IGI		 (PMID:9268572)
(PMID:14681194)		 MGI PMID:9268572 PMID:14681194 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Cckar cholecystokinin A receptor acts_upstream_of_or_within IMP (PMID:15152034) MGI PMID:15152034 NCBI chr 5:53,855,827...53,865,046
Ensembl chr 5:53,855,118...53,865,047 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 ISO RGD PMID:16516309 RGD:4890442 NCBI chr 9:123,921,557...123,934,153
Ensembl chr 9:123,921,580...123,947,736 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:17694053) MGI PMID:17694053 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Chrd chordin involved_in
acts_upstream_of_or_within		 IGI
IMP		 (PMID:12397106)
(PMID:10688202)		 MGI PMID:10688202 PMID:12397106 NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134 		JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase ISO RGD PMID:16876328 RGD:6483359 NCBI chr11:100,465,765...100,472,565
Ensembl chr11:100,465,730...100,482,555 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:15708565) MGI PMID:15708565 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within IMP (PMID:16387639) MGI PMID:16387639 NCBI chr 3:55,149,724...55,446,489
Ensembl chr 3:55,149,785...55,446,489 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within IGI (PMID:17127040) MGI PMID:17127040 NCBI chr19:30,523,276...30,526,896
Ensembl chr19:30,523,263...30,527,065 		JBrowse link
G Dlc1 deleted in liver cancer 1 acts_upstream_of_or_within IMP (PMID:15710412) MGI PMID:15710412 NCBI chr 8:37,034,893...37,420,343
Ensembl chr 8:37,034,905...37,420,297 		JBrowse link
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 ISO RGD PMID:9878698 RGD:10059325 NCBI chr 8:84,334,804...84,339,282
Ensembl chr 8:84,334,822...84,339,282 		JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IMP
IBA		 (MGI:3832346|PMID:19150847) UniProt
GO_Central		 PMID:19150847 GO_REF:0000033 MGI:3832346 NCBI chr 4:148,182,894...148,215,582
Ensembl chr 4:148,182,894...148,215,155 		JBrowse link
G Drd2 dopamine receptor D2 involved_in ISO RGD
MGI		 PMID:17175142 GO_REF:0000096 MGI:4417868 RGD:2311572 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IMP (PMID:16229832) MGI PMID:16229832 NCBI chr 9:6,928,550...7,177,619
Ensembl chr 9:6,928,503...7,184,446 		JBrowse link
G E2f1 E2F transcription factor 1 acts_upstream_of_or_within IMP (PMID:15525772) MGI PMID:15525772 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within IMP
IGI		 (PMID:15294144)
(PMID:15917450)		 MGI PMID:15294144 PMID:15917450 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within IMP (PMID:16540508) MGI PMID:16540508 NCBI chr 6:23,245,043...23,250,942
Ensembl chr 6:23,245,043...23,248,361 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within IMP (PMID:15188439), (PMID:16284245) MGI PMID:15188439 PMID:16284245 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within IMP (PMID:15708559) MGI PMID:15708559 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IMP (PMID:12151532), (PMID:14566948), (PMID:7605629)
(PMID:14704420)		 MGI PMID:7605629 PMID:12151532 PMID:14566948 PMID:14704420 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Foxp1 forkhead box P1 ISO RGD PMID:18561326 RGD:11561932 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682 		JBrowse link
G Foxp2 forkhead box P2 ISO RGD PMID:12815709 RGD:11536004 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within IMP (PMID:16239343) MGI PMID:16239343 NCBI chr10:116,905,324...116,986,311
Ensembl chr10:116,905,332...116,984,439 		JBrowse link
G Fyn Fyn proto-oncogene acts_upstream_of_or_within IGI
IMP		 (PMID:16162939)
(PMID:15073522)		 MGI PMID:15073522 PMID:16162939 NCBI chr10:39,245,735...39,441,377
Ensembl chr10:39,244,851...39,441,377 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:16168404) MGI PMID:16168404 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gnao1 guanine nucleotide binding protein, alpha O ISO RGD PMID:8746812 RGD:2302010 NCBI chr 8:94,537,213...94,696,016
Ensembl chr 8:94,536,594...94,696,016 		JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within IGI (PMID:17127040) MGI PMID:17127040 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589 		JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP
IDA		 (PMID:17360769), (PMID:9620767)
(PMID:24520934)		 MGI PMID:9620767 PMID:17360769 PMID:24520934 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IMP (PMID:15459110)
(PMID:10804184), (PMID:11291863)		 MGI PMID:10804184 PMID:11291863 PMID:15459110 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Hspa8 heat shock protein 8 ISO RGD PMID:9878698 RGD:10059325 NCBI chr 9:40,712,572...40,716,498
Ensembl chr 9:40,712,280...40,721,383 		JBrowse link
G Htra2 HtrA serine peptidase 2 acts_upstream_of_or_within IMP (PMID:15509788) MGI PMID:15509788 NCBI chr 6:83,028,247...83,031,552
Ensembl chr 6:83,028,247...83,032,254 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:28291836) MGI PMID:28291836 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within IMP (PMID:15841184), (PMID:16467156) MGI PMID:15841184 PMID:16467156 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926 		JBrowse link
G Itgam integrin alpha M involved_in IDA (MGI:3812233|PMID:18685038) ARUK-UCL PMID:18685038 MGI:3812233 NCBI chr 7:127,661,812...127,717,663
Ensembl chr 7:127,661,812...127,717,663 		JBrowse link
G Kcnc4 potassium voltage gated channel, Shaw-related subfamily, member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 3:107,345,614...107,367,617
Ensembl chr 3:107,345,619...107,366,868 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within IMP (PMID:28291836) MGI PMID:28291836 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Lrp2 low density lipoprotein receptor-related protein 2 acts_upstream_of_or_within IMP (PMID:15623804) MGI PMID:15623804 NCBI chr 2:69,254,679...69,416,373
Ensembl chr 2:69,254,684...69,416,409 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:15384171) MGI PMID:15384171 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within IMP (PMID:12897243)
(PMID:15572149)		 MGI PMID:12897243 PMID:15572149 NCBI chr17:25,116,480...25,155,951
Ensembl chr17:25,111,127...25,155,942 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within IMP (PMID:17029558) MGI PMID:17029558 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157 		JBrowse link
G Mrtfa myocardin related transcription factor A acts_upstream_of_or_within IGI (PMID:20534669) MGI PMID:20534669 NCBI chr15:80,896,482...81,074,937
Ensembl chr15:80,896,482...81,074,958 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within IGI (PMID:20534669) MGI PMID:20534669 NCBI chr16:13,073,913...13,235,393
Ensembl chr16:13,074,345...13,235,393 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IMP (PMID:15188430), (PMID:15217086) MGI PMID:15188430 PMID:15217086 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Myo1d myosin ID ISO RGD PMID:8034741 RGD:633383 NCBI chr11:80,372,945...80,670,881
Ensembl chr11:80,372,952...80,670,851 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within IMP (PMID:17928865) MGI PMID:17928865 NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 acts_upstream_of_or_within IMP (PMID:15473967) MGI PMID:15473967 NCBI chr16:13,981,139...14,010,792
Ensembl chr16:13,981,139...14,010,792 		JBrowse link
G Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 acts_upstream_of_or_within IGI
IMP		 (PMID:16020517) MGI PMID:16020517 NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722 		JBrowse link
G Neurog1 neurogenin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:56,398,291...56,399,993
Ensembl chr13:56,398,291...56,399,976 		JBrowse link
G Neurog2 neurogenin 2 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:15328020) GO_Central
MGI		 PMID:15328020 GO_REF:0000033 NCBI chr 3:127,426,382...127,429,285
Ensembl chr 3:127,426,784...127,429,280 		JBrowse link
G Neurog3 neurogenin 3 involved_in ISO
IBA		 RGD
GO_Central		 PMID:9130143 GO_REF:0000033 RGD:633362 NCBI chr10:61,968,869...61,970,542
Ensembl chr10:61,968,869...61,970,542 		JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within IMP (PMID:15632069) MGI PMID:15632069 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987 		JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:30503862) MGI PMID:30503862 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO (PMID:15494458) UniProt PMID:15494458 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nog noggin involved_in ISO
IGI		 (PMID:10688202)
(PMID:12397106)		 RGD
MGI		 PMID:10688202 PMID:12397106 PMID:14643011 RGD:1358324 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IGI
IMP		 (PMID:16120638) MGI PMID:16120638 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch3 notch 3 acts_upstream_of_or_within IGI (PMID:16120638) MGI PMID:16120638 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826 		JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 acts_upstream_of_or_within IDA (PMID:15548577) MGI PMID:15548577 NCBI chr13:78,337,090...78,346,954
Ensembl chr13:78,337,092...78,347,876 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within IDA (PMID:15548577) MGI PMID:15548577 NCBI chr 7:70,001,694...70,016,494
Ensembl chr 7:70,001,692...70,016,483 		JBrowse link
G Numb NUMB endocytic adaptor protein acts_upstream_of_or_within IMP (PMID:14687546) MGI PMID:14687546 NCBI chr12:83,840,808...83,968,708
Ensembl chr12:83,840,808...83,968,708 		JBrowse link
G Numbl numb-like acts_upstream_of_or_within IMP (PMID:14687546) MGI PMID:14687546 NCBI chr 7:26,957,884...26,981,570
Ensembl chr 7:26,957,858...26,981,569 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) ISO RGD PMID:22928023 RGD:9590181 NCBI chr  X:100,683,617...100,727,957
Ensembl chr  X:100,683,666...100,727,957 		JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within IGI (PMID:15201224)
(PMID:15917450)		 MGI PMID:15201224 PMID:15917450 NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IGI
IMP		 (PMID:15917450)
(PMID:14625556)
(PMID:15201223)		 MGI PMID:14625556 PMID:15201223 PMID:15917450 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:15758185)
(PMID:15548580)
(PMID:15514979)		 MGI PMID:15514979 PMID:15548580 PMID:15758185 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pcdh9 protocadherin 9 ISO RGD PMID:17614211 RGD:2316761 NCBI chr14:93,251,136...94,132,619
Ensembl chr14:93,250,846...94,128,115 		JBrowse link
G Pou3f1 POU domain, class 3, transcription factor 1 acts_upstream_of_or_within IMP (PMID:19527706) MGI PMID:19527706 NCBI chr 4:124,551,439...124,554,448
Ensembl chr 4:124,550,600...124,554,448 		JBrowse link
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 5:51,611,591...52,273,316
Ensembl chr 5:51,611,592...51,725,068 		JBrowse link
G Prkg1 protein kinase, cGMP-dependent, type I acts_upstream_of_or_within IMP (PMID:16154207) MGI PMID:16154207 NCBI chr19:30,541,887...31,742,675
Ensembl chr19:30,541,889...31,742,433 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (PMID:15148382) MGI PMID:15148382 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within IGI (PMID:15148382) MGI PMID:15148382 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in IDA (MGI:3827084|PMID:19007770) UniProt PMID:19007770 MGI:3827084 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Reln reelin acts_upstream_of_or_within IMP (PMID:17694053) MGI PMID:17694053 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Setd2 SET domain containing 2 acts_upstream_of_or_within IMP (PMID:20133625) MGI PMID:20133625 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IGI (PMID:16020517) MGI PMID:16020517 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (PMID:16330018) MGI PMID:16330018 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 acts_upstream_of_or_within IMP (PMID:15882093) MGI PMID:15882093 NCBI chr 8:12,445,519...12,449,555
Ensembl chr 8:12,445,295...12,450,126 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Sox3 SRY (sex determining region Y)-box 3 acts_upstream_of_or_within IMP (PMID:14981518) MGI PMID:14981518 NCBI chr  X:59,934,972...59,937,045
Ensembl chr  X:59,934,972...59,937,036 		JBrowse link
G Src Rous sarcoma oncogene acts_upstream_of_or_within IGI (PMID:16162939) MGI PMID:16162939 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:20534669) MGI PMID:20534669 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Sstr1 somatostatin receptor 1 ISO RGD PMID:10805921 RGD:2325003 NCBI chr12:58,258,524...58,262,822
Ensembl chr12:58,258,558...58,260,673 		JBrowse link
G Sstr2 somatostatin receptor 2 ISO RGD PMID:10805921 RGD:2325003 NCBI chr11:113,510,153...113,516,854
Ensembl chr11:113,510,168...113,516,854 		JBrowse link
G Sstr3 somatostatin receptor 3 ISO RGD PMID:10805921 RGD:2325003 NCBI chr15:78,421,214...78,433,565
Ensembl chr15:78,421,208...78,428,885 		JBrowse link
G Sstr4 somatostatin receptor 4 ISO RGD PMID:10805921 RGD:2325003 NCBI chr 2:148,237,297...148,238,684
Ensembl chr 2:148,237,264...148,238,687 		JBrowse link
G Stil Scl/Tal1 interrupting locus acts_upstream_of_or_within IMP (PMID:10385121) MGI PMID:10385121 NCBI chr 4:114,857,287...114,900,404
Ensembl chr 4:114,857,356...114,900,393 		JBrowse link
G Top2b topoisomerase (DNA) II beta acts_upstream_of_or_within IMP (PMID:12773624) MGI PMID:12773624 NCBI chr14:6,038,976...6,104,585
Ensembl chr14:6,034,301...6,104,584 		JBrowse link
G Trp73 transformation related protein 73 acts_upstream_of_or_within IMP (PMID:15525772) MGI PMID:15525772 NCBI chr 4:154,140,706...154,224,332
Ensembl chr 4:154,140,706...154,224,665 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within IMP (PMID:23141541) MGI PMID:23141541 NCBI chr 2:120,563,297...120,681,111
Ensembl chr 2:120,563,297...120,681,085 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within IMP (PMID:28291836) MGI PMID:28291836 NCBI chr 2:66,014,131...66,087,144
Ensembl chr 2:66,014,671...66,086,961 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within IGI
IMP		 (PMID:14681194)
(PMID:15013800)		 MGI PMID:14681194 PMID:15013800 NCBI chr17:66,230,060...66,258,198
Ensembl chr17:66,228,967...66,258,221 		JBrowse link
G Tyrobp TYRO protein tyrosine kinase binding protein involved_in IDA (MGI:3812233|PMID:18685038) ARUK-UCL PMID:18685038 MGI:3812233 NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010 		JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IMP (MGI:5289759|PMID:21856776) UniProt PMID:21856776 MGI:5289759 NCBI chr 6:83,688,221...83,715,295
Ensembl chr 6:83,688,246...83,715,295 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 ISO RGD PMID:11731009 RGD:2325879 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
G Zic1 zinc finger protein of the cerebellum 1 involved_in IGI (PMID:17507568) MGI PMID:17507568 NCBI chr 9:91,240,111...91,250,136
Ensembl chr 9:91,240,111...91,247,863 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IGI (PMID:17507568) MGI PMID:17507568 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
G Zic5 zinc finger protein of the cerebellum 5 acts_upstream_of_or_within IMP (PMID:15736266) MGI PMID:15736266 NCBI chr14:122,696,572...122,703,127
Ensembl chr14:122,694,207...122,703,089 		JBrowse link
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16613831) MGI PMID:16613831 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:10625551) MGI PMID:10625551 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:11060228), (PMID:11124115), (PMID:18701439) MGI PMID:11060228 PMID:11124115 PMID:18701439 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:10393115), (PMID:11163262), (PMID:11830575) MGI PMID:10393115 PMID:11163262 PMID:11830575 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:11124115)
(PMID:11050125), (PMID:18701439), (PMID:24528677)		 MGI PMID:11050125 PMID:11124115 PMID:18701439 PMID:24528677 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Six3 sine oculis-related homeobox 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within IMP (PMID:19732765) MGI PMID:19732765 NCBI chr 2:66,014,131...66,087,144
Ensembl chr 2:66,014,671...66,086,961 		JBrowse link
forebrain generation of neurons term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:14715945) MGI PMID:14715945 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:9394001) MGI PMID:9394001 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
forebrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16613831) MGI PMID:16613831 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gak cyclin G associated kinase acts_upstream_of_or_within IMP (PMID:18434600) MGI PMID:18434600 NCBI chr 5:108,716,973...108,777,643
Ensembl chr 5:108,717,277...108,777,621 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within IMP (PMID:10693795) MGI PMID:10693795 NCBI chr12:8,347,918...8,351,954
Ensembl chr12:8,347,918...8,351,954 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:9398437) MGI PMID:9398437 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP (PMID:10882526), (PMID:9620767) MGI PMID:9620767 PMID:10882526 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IMP (PMID:21445260) MGI PMID:21445260 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:19036983) MGI PMID:19036983 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:11297510) MGI PMID:11297510 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3629385|PMID:16675393) BHF-UCL PMID:16675393 MGI:3629385 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in IMP (PMID:31386652) MGI PMID:31386652 NCBI chr15:98,847,728...98,851,382
Ensembl chr15:98,847,718...98,851,584 		JBrowse link
G Uchl5 ubiquitin carboxyl-terminal esterase L5 involved_in IMP (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr 1:143,652,993...143,683,204
Ensembl chr 1:143,653,010...143,683,204 		JBrowse link
forebrain neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspm abnormal spindle microtubule assembly acts_upstream_of_or_within IMP (PMID:16798874) MGI PMID:16798874 NCBI chr 1:139,381,450...139,421,826
Ensembl chr 1:139,382,510...139,421,829 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IGI (PMID:14715945) MGI PMID:14715945 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
forebrain neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 involved_in ISO induction of dopaminergic neurons in the rostral forebrain RGD
MGI		 PMID:9630220 GO_REF:0000096 MGI:4417868 RGD:2289424 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:21048141) MGI PMID:21048141 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Gnaq guanine nucleotide binding protein, alpha q polypeptide acts_upstream_of_or_within IMP (PMID:15340067) MGI PMID:15340067 NCBI chr19:16,110,048...16,365,884
Ensembl chr19:16,110,195...16,364,827 		JBrowse link
G Lhx6 LIM homeobox protein 6 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:15217369) MGI
GO_Central		 PMID:15217369 GO_REF:0000033 NCBI chr 2:35,971,962...35,996,004
Ensembl chr 2:35,971,965...35,995,420 		JBrowse link
G Lhx8 LIM homeobox protein 8 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:15217369) MGI
GO_Central		 PMID:15217369 GO_REF:0000033 NCBI chr 3:154,011,925...154,036,190
Ensembl chr 3:154,011,931...154,036,296 		JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor (GEF) 2 involved_in IMP (MGI:3848551|PMID:19453629) UniProt PMID:19453629 MGI:3848551 NCBI chr 3:78,969,818...79,194,681
Ensembl chr 3:78,969,823...79,193,824 		JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within IMP (PMID:24844465) MGI PMID:24844465 NCBI chr13:51,805,721...51,838,080
Ensembl chr13:51,805,733...51,838,080 		JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 acts_upstream_of_or_within IMP (PMID:15882093) MGI PMID:15882093 NCBI chr 8:12,445,519...12,449,555
Ensembl chr 8:12,445,295...12,450,126 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:10803593) MGI PMID:10803593 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISO RGD
MGI		 PMID:17936272 GO_REF:0000096 MGI:4417868 RGD:2314144 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IMP (MGI:5430247|PMID:22542597) ParkinsonsUK-UCL PMID:22542597 MGI:5430247 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within IGI (PMID:11163262) MGI PMID:11163262 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IGI (PMID:11163262) MGI PMID:11163262 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Lhx5 LIM homeobox protein 5 acts_upstream_of_or_within IMP (PMID:10325223) MGI PMID:10325223 NCBI chr 5:120,569,951...120,579,522
Ensembl chr 5:120,569,764...120,579,288 		JBrowse link
G Lhx8 LIM homeobox protein 8 acts_upstream_of_or_within IMP (PMID:15978004) MGI PMID:15978004 NCBI chr 3:154,011,925...154,036,190
Ensembl chr 3:154,011,931...154,036,296 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:11163262) MGI PMID:11163262 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Otp orthopedia homeobox acts_upstream_of_or_within IMP (PMID:17481897) MGI PMID:17481897 NCBI chr13:95,012,144...95,021,633
Ensembl chr13:95,012,110...95,021,638 		JBrowse link
G Phlda1 pleckstrin homology like domain, family A, member 1 ISO RGD PMID:10428057 RGD:70034 NCBI chr10:111,342,147...111,344,510
Ensembl chr10:111,342,147...111,344,506 		JBrowse link
G Pou3f4 POU domain, class 3, transcription factor 4 acts_upstream_of_or_within IMP (PMID:9889200) MGI PMID:9889200 NCBI chr  X:109,857,985...109,862,714
Ensembl chr  X:109,857,886...109,860,813 		JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 acts_upstream_of_or_within IMP (PMID:15882093) MGI PMID:15882093 NCBI chr 8:12,445,519...12,449,555
Ensembl chr 8:12,445,295...12,450,126 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IMP (PMID:15240551) MGI PMID:15240551 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
forebrain neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx6 LIM homeobox protein 6 acts_upstream_of_or_within IGI (PMID:18339674) MGI PMID:18339674 NCBI chr 2:35,971,962...35,996,004
Ensembl chr 2:35,971,965...35,995,420 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:18339674) MGI PMID:18339674 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Tfap2c transcription factor AP-2, gamma acts_upstream_of_or_within IMP (PMID:19749747) MGI PMID:19749747 NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542 		JBrowse link
forebrain radial glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:9232833) MGI PMID:9232833 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IGI (PMID:14715945) MGI PMID:14715945 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:14715945) MGI PMID:14715945 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in IMP (MGI:5927282|PMID:28965759) UniProt PMID:28965759 MGI:5927282 NCBI chr 3:123,161,944...123,179,639
Ensembl chr 3:123,161,946...123,179,757 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IMP (MGI:5927282|PMID:28965759) UniProt PMID:28965759 MGI:5927282 NCBI chr14:52,532,298...52,548,555
Ensembl chr14:52,532,298...52,542,585 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:27965439) MGI PMID:27965439 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within IMP (PMID:22405202) MGI PMID:22405202 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133 		JBrowse link
forebrain regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 acts_upstream_of_or_within IGI (PMID:10529425) MGI PMID:10529425 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Pgap1 post-GPI attachment to proteins 1 acts_upstream_of_or_within IMP
IGI		 (PMID:10529425) MGI PMID:10529425 NCBI chr 1:54,512,159...54,596,843
Ensembl chr 1:54,512,153...54,596,843 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:24528677) MGI PMID:24528677 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Wnt2b wingless-type MMTV integration site family, member 2B involved_in IEP (MGI:4821941|PMID:15164427) UniProt PMID:15164427 MGI:4821941 NCBI chr 3:104,852,121...104,869,025
Ensembl chr 3:104,852,588...104,869,237 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B involved_in IEP (MGI:4821941|PMID:15164427) UniProt PMID:15164427 MGI:4821941 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
forebrain ventricular zone progenitor cell division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dixdc1 DIX domain containing 1 involved_in IMP (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817 		JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 acts_upstream_of_or_within IGI (PMID:12130536) MGI PMID:12130536 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366 		JBrowse link
G Pou3f3 POU domain, class 3, transcription factor 3 acts_upstream_of_or_within IGI (PMID:12130536) MGI PMID:12130536 NCBI chr 1:42,734,928...42,739,370
Ensembl chr 1:42,734,085...42,742,336 		JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor-like 13B involved_in IMP (MGI:5528615|PMID:23817546) UniProt PMID:23817546 MGI:5528615 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
G Flna filamin, alpha involved_in ISO RGD
MGI		 PMID:22076441 GO_REF:0000096 MGI:4417868 RGD:11564351 NCBI chr  X:73,267,067...73,293,787
Ensembl chr  X:73,267,067...73,293,426 		JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) acts_upstream_of_or_within IMP (PMID:21185282) MGI PMID:21185282 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IGI (PMID:14715945) MGI PMID:14715945 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:14715945) MGI PMID:14715945 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
fourth ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle acts_upstream_of_or_within IMP (PMID:16481398)
(PMID:11283949)		 MGI PMID:11283949 PMID:16481398 NCBI chr11:68,581,228...68,707,451
Ensembl chr11:68,582,385...68,707,458 		JBrowse link
globus pallidus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within IMP (PMID:17460091) MGI PMID:17460091 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963 		JBrowse link
G Kcnc1 potassium voltage gated channel, Shaw-related subfamily, member 1 ISO RGD PMID:10482766 RGD:9685780 NCBI chr 7:46,045,643...46,088,130
Ensembl chr 7:46,045,921...46,088,128 		JBrowse link
G Kcnc2 potassium voltage gated channel, Shaw-related subfamily, member 2 ISO RGD PMID:10482766 RGD:9685780 NCBI chr10:112,105,803...112,302,209
Ensembl chr10:112,107,026...112,302,929 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:20181579) MGI PMID:20181579 GO_REF:0000119 MGI:4834177 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
gonadotrophin-releasing hormone neuronal migration to the hypothalamus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndnf neuron-derived neurotrophic factor involved_in IMP (MGI:6442643|PMID:31883645) UniProt PMID:31883645 MGI:6442643 NCBI chr 6:65,648,595...65,689,307
Ensembl chr 6:65,648,574...65,689,310 		JBrowse link
G Nrp1 neuropilin 1 involved_in IMP (MGI:4850173|PMID:21059704) BHF-UCL PMID:21059704 MGI:4850173 NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844 		JBrowse link
G Nrp2 neuropilin 2 involved_in IMP (MGI:4850173|PMID:21059704) BHF-UCL PMID:21059704 MGI:4850173 NCBI chr 1:62,742,476...62,857,851
Ensembl chr 1:62,742,444...62,857,854 		JBrowse link
G Plxna1 plexin A1 involved_in IGI (MGI:6389759|PMID:31690636) ARUK-UCL PMID:31690636 MGI:6389759 NCBI chr 6:89,293,295...89,339,595
Ensembl chr 6:89,293,296...89,339,602 		JBrowse link
G Plxna3 plexin A3 involved_in IGI (MGI:6389759|PMID:31690636) ARUK-UCL PMID:31690636 MGI:6389759 NCBI chr  X:73,372,644...73,388,295
Ensembl chr  X:73,372,672...73,388,295 		JBrowse link
G Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A involved_in IMP (MGI:4850173|PMID:21059704) BHF-UCL PMID:21059704 MGI:4850173 NCBI chr 5:13,174,789...13,653,453
Ensembl chr 5:13,175,381...13,652,533 		JBrowse link
G Sema3e sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:14,075,290...14,306,703
Ensembl chr 5:14,075,290...14,306,703 		JBrowse link
habenula development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 acts_upstream_of_or_within IMP (PMID:19906978) MGI PMID:19906978 NCBI chr 2:56,996,845...57,014,152
Ensembl chr 2:56,996,842...57,014,015 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:24528677) MGI PMID:24528677 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pou4f1 POU domain, class 4, transcription factor 1 acts_upstream_of_or_within IMP (PMID:19906978) MGI PMID:19906978 NCBI chr14:104,699,111...104,705,554
Ensembl chr14:104,699,112...104,705,435 		JBrowse link
hindbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (PMID:15872003) MGI PMID:15872003 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IGI (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IGI (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (MGI:1931800|PMID:11262227) ParkinsonsUK-UCL PMID:11262227 MGI:1931800 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G En1 engrailed 1 acts_upstream_of_or_within IGI (PMID:15607945) MGI PMID:15607945 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G En2 engrailed 2 acts_upstream_of_or_within IGI (PMID:15607945) MGI PMID:15607945 NCBI chr 5:28,370,694...28,377,195
Ensembl chr 5:28,370,692...28,377,164 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:15829521), (PMID:16651541) MGI PMID:15829521 PMID:16651541 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IGI
IMP		 (PMID:15496441)
(PMID:8575294)		 MGI PMID:8575294 PMID:15496441 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IMP (PMID:15872003) MGI PMID:15872003 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within IMP (PMID:15367676) MGI PMID:15367676 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Neurod1 neurogenic differentiation 1 acts_upstream_of_or_within IMP (PMID:16368089) MGI PMID:16368089 NCBI chr 2:79,282,981...79,286,980
Ensembl chr 2:79,282,865...79,287,095 		JBrowse link
G Neurog3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr10:61,968,869...61,970,542
Ensembl chr10:61,968,869...61,970,542 		JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within IMP (PMID:15632069) MGI PMID:15632069 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987 		JBrowse link
G Pax6 paired box 6 involved_in ISO RGD
MGI		 PMID:11880342 PMID:20082710 GO_REF:0000096 MGI:4417868 RGD:729590 RGD:8552345 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Ptf1a pancreas specific transcription factor, 1a involved_in IDA (MGI:1859633|PMID:11318877) UniProt PMID:11318877 MGI:1859633 NCBI chr 2:19,450,474...19,452,312
Ensembl chr 2:19,450,474...19,452,312 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:9749725 RGD:9831452 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IGI
IMP		 (PMID:15496441)
(PMID:15183722)		 MGI PMID:15183722 PMID:15496441 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smad1 SMAD family member 1 acts_upstream_of_or_within IMP (PMID:15899870) MGI PMID:15899870 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147 		JBrowse link
G Smad9 SMAD family member 9 acts_upstream_of_or_within IMP (PMID:15899870) MGI PMID:15899870 NCBI chr 3:54,662,873...54,709,162
Ensembl chr 3:54,663,003...54,708,678 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (PMID:16330018) MGI PMID:16330018 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within IMP (PMID:16540585) MGI PMID:16540585 NCBI chr 2:61,633,228...61,644,458
Ensembl chr 2:61,633,274...61,644,458 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO RGD PMID:11231055 RGD:2302116 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Wls wntless WNT ligand secretion mediator involved_in IMP (MGI:4834980|PMID:20614471) ParkinsonsUK-UCL PMID:20614471 MGI:4834980 NCBI chr 3:159,545,287...159,644,302
Ensembl chr 3:159,545,309...159,644,300 		JBrowse link
hindbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlc1 deleted in liver cancer 1 acts_upstream_of_or_within IMP (PMID:15710412) MGI PMID:15710412 NCBI chr 8:37,034,893...37,420,343
Ensembl chr 8:37,034,905...37,420,297 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:9398437) MGI PMID:9398437 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IGI (PMID:11500373) MGI PMID:11500373 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within IGI (PMID:11500373) MGI PMID:11500373 NCBI chr 4:152,369,707...152,376,133
Ensembl chr 4:152,370,429...152,376,119 		JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb1 Eph receptor B1 involved_in ISO RGD
MGI		 PMID:28276447 GO_REF:0000096 MGI:4417868 RGD:127285619 NCBI chr 9:101,799,327...102,231,892
Ensembl chr 9:101,799,327...102,231,892 		JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO RGD
MGI		 PMID:28276447 GO_REF:0000096 MGI:4417868 RGD:127285619 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299 		JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within IMP (PMID:21068058) MGI PMID:21068058 NCBI chr 5:67,251,751...67,256,399
Ensembl chr 5:67,251,742...67,256,644 		JBrowse link
hippocampus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor, type IC ISO RGD PMID:8940033 RGD:631880 NCBI chr 2:58,157,465...58,247,909
Ensembl chr 2:58,157,465...58,247,907 		JBrowse link
G Akap5 A kinase anchor protein 5 ISO RGD PMID:19535604 RGD:2313144 NCBI chr12:76,371,652...76,380,925
Ensembl chr12:76,371,665...76,380,927 		JBrowse link
G Alk anaplastic lymphoma kinase acts_upstream_of_or_within IMP (PMID:17487225) MGI PMID:17487225 NCBI chr17:72,174,206...72,911,719
Ensembl chr17:72,175,967...72,911,622 		JBrowse link
G Anxa3 annexin A3 ISO RGD PMID:18493952 RGD:2302825 NCBI chr 5:96,941,257...96,993,825
Ensembl chr 5:96,941,198...96,993,825 		JBrowse link
G Atg16l1 autophagy related 16 like 1 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 1:87,683,730...87,720,150
Ensembl chr 1:87,683,592...87,720,150 		JBrowse link
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 ISO RGD PMID:16200642 RGD:6906893 NCBI chr 1:133,630,416...133,728,755
Ensembl chr 1:133,627,195...133,728,779 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 8:94,794,580...94,825,997
Ensembl chr 8:94,794,582...94,825,556 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:18032602), (PMID:24695551) MGI PMID:18032602 PMID:24695551 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Bcan brevican acts_upstream_of_or_within IMP (PMID:12370289) MGI PMID:12370289 NCBI chr 3:87,894,839...87,908,458
Ensembl chr 3:87,894,838...87,907,537 		JBrowse link
G Casp3 caspase 3 ISO RGD PMID:18459132 RGD:2293317 NCBI chr 8:47,070,326...47,092,733
Ensembl chr 8:47,070,326...47,092,724 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:11517264) MGI PMID:11517264 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010 		JBrowse link
G Cdk5r2 cyclin dependent kinase 5, regulatory subunit 2 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr 1:74,894,188...74,896,891
Ensembl chr 1:74,894,093...74,896,891 		JBrowse link
G Cfl1 cofilin 1, non-muscle ISO RGD PMID:27073215 RGD:11568695 NCBI chr19:5,540,483...5,544,059
Ensembl chr19:5,540,483...5,545,229 		JBrowse link
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chr14:66,370,685...66,390,397
Ensembl chr14:66,372,488...66,390,397 		JBrowse link
G Chrna5 cholinergic receptor, nicotinic, alpha polypeptide 5 ISO RGD PMID:15558717 RGD:150530459 NCBI chr 9:54,888,112...54,918,704
Ensembl chr 9:54,888,164...54,915,063 		JBrowse link
G Crk v-crk avian sarcoma virus CT10 oncogene homolog acts_upstream_of_or_within IGI (PMID:19074029) MGI PMID:19074029 NCBI chr11:75,570,020...75,599,254
Ensembl chr11:75,570,085...75,597,734 		JBrowse link
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like acts_upstream_of_or_within IGI (PMID:19074029) MGI PMID:19074029 NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr 9:57,905,307...57,934,314
Ensembl chr 9:57,913,694...57,934,306 		JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr19:46,655,604...46,661,439
Ensembl chr19:46,655,604...46,661,611 		JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr 9:54,073,221...54,175,448
Ensembl chr 9:54,073,221...54,175,394 		JBrowse link
G Dab1 disabled 1 acts_upstream_of_or_within IMP (PMID:18477607) MGI PMID:18477607 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Dclk2 doublecortin-like kinase 2 acts_upstream_of_or_within IGI (PMID:19342486) MGI PMID:19342486 NCBI chr 3:86,693,457...86,828,292
Ensembl chr 3:86,693,458...86,828,159 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IGI
IMP		 (PMID:19342486) MGI PMID:19342486 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within IGI (PMID:11163262) MGI PMID:11163262 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IGI (PMID:11163262) MGI PMID:11163262 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within IMP (PMID:17360497) MGI PMID:17360497 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724 		JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B, subunit 2 beta ISO RGD PMID:12850562 RGD:11041879 NCBI chr12:85,266,255...85,273,402
Ensembl chr12:85,266,255...85,273,402 		JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B, subunit 3 ISO RGD PMID:12850562 RGD:11041879 NCBI chr 4:116,876,559...116,944,049
Ensembl chr 4:116,876,599...116,944,503 		JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B, subunit 4 delta ISO RGD PMID:12850562 RGD:11041879 NCBI chr 5:31,344,902...31,350,483
Ensembl chr 5:31,344,902...31,350,774 		JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon ISO RGD PMID:12850562 RGD:11041879 NCBI chr16:20,317,544...20,328,073
Ensembl chr16:20,317,567...20,328,073 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Epha5 Eph receptor A5 involved_in IDA (MGI:2384261|PMID:12124402) UniProt PMID:12124402 MGI:2384261 NCBI chr 5:84,199,024...84,565,677
Ensembl chr 5:84,202,620...84,565,241 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO RGD PMID:23932971 RGD:9587811 NCBI chr11:101,081,941...101,117,268
Ensembl chr11:101,081,941...101,117,289 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:23932971 RGD:9587811 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G Fbxw7as1 F-box and WD-40 domain protein 7 antisense transcript 1 acts_upstream_of_or_within IMP (PMID:18780760) MGI PMID:18780760
G Fez1 fasciculation and elongation protein zeta 1 ISO RGD PMID:14992819 RGD:13208825 NCBI chr 9:36,732,694...36,790,220
Ensembl chr 9:36,733,160...36,790,220 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in IMP (MGI:5431268|PMID:22726441) UniProt PMID:22726441 MGI:5431268 NCBI chr  X:58,107,499...58,630,932
Ensembl chr  X:58,107,505...58,613,431 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:22235033) MGI PMID:22235033 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Grin2a glutamate receptor, ionotropic, NMDA2A (epsilon 1) ISO RGD PMID:19535712 RGD:2325978 NCBI chr16:9,385,765...9,813,744
Ensembl chr16:9,385,762...9,813,424 		JBrowse link
G Grin2b glutamate receptor, ionotropic, NMDA2B (epsilon 2) ISO RGD PMID:19535712 RGD:2325978 NCBI chr 6:135,690,219...136,150,658
Ensembl chr 6:135,690,231...136,150,509 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446 		JBrowse link
G Hdac1 histone deacetylase 1 acts_upstream_of_or_within IGI (PMID:19380719) MGI PMID:19380719 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within IGI (PMID:19380719) MGI PMID:19380719 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr13:58,538,946...58,551,157
Ensembl chr13:58,538,956...58,551,157 		JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 ISO RGD PMID:21047951 RGD:4145527 NCBI chr13:64,206,088...64,237,076
Ensembl chr13:64,206,080...64,237,044 		JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 ISO RGD PMID:21047951 RGD:4145527 NCBI chr 1:169,777,109...169,796,757
Ensembl chr 1:169,777,104...169,796,810 		JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 involved_in ISO
IBA		 RGD
GO_Central		 PMID:21047951 GO_REF:0000033 RGD:4145527 NCBI chr 3:98,749,672...98,767,110
Ensembl chr 3:98,759,510...98,767,110 		JBrowse link
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:98,618,423...98,631,859
Ensembl chr 3:98,616,571...98,631,859 		JBrowse link
G Hsd3b3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:98,648,792...98,672,465
Ensembl chr 3:98,648,839...98,670,443 		JBrowse link
G Hsd3b4 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:98,406,387...98,417,895
Ensembl chr 3:98,406,387...98,417,830 		JBrowse link
G Hsd3b5 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:98,525,952...98,552,850
Ensembl chr 3:98,525,950...98,537,568 		JBrowse link
G Hsd3b6 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:98,712,820...98,721,759
Ensembl chr 3:98,712,820...98,721,759 		JBrowse link
G Hsd3b9 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:98,352,991...98,364,833
Ensembl chr 3:98,352,991...98,364,442 		JBrowse link
G Htr5a 5-hydroxytryptamine (serotonin) receptor 5A ISO RGD PMID:16572590 RGD:2316993 NCBI chr 5:28,046,836...28,059,403
Ensembl chr 5:28,047,147...28,060,086 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:15469968) MGI PMID:15469968 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Igf1r insulin-like growth factor I receptor ISO RGD PMID:22042446 RGD:10403040 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416 		JBrowse link
G Insr insulin receptor ISO RGD PMID:22042446 RGD:10403040 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Kcna1 potassium voltage-gated channel, shaker-related subfamily, member 1 involved_in IMP (MGI:5613474|PMID:17315199) UniProt PMID:17315199 MGI:5613474 NCBI chr 6:126,613,426...126,622,764
Ensembl chr 6:126,617,360...126,623,347 		JBrowse link
G Kcnq2 potassium voltage-gated channel, subfamily Q, member 2 acts_upstream_of_or_within IMP (PMID:15608631) MGI PMID:15608631 NCBI chr 2:180,717,372...180,777,368
Ensembl chr 2:180,717,372...180,777,093 		JBrowse link
G Kdm6b KDM1 lysine (K)-specific demethylase 6B involved_in ISO RGD
MGI		 PMID:23932971 GO_REF:0000096 MGI:4417868 RGD:9587811 NCBI chr11:69,289,334...69,311,188
Ensembl chr11:69,289,334...69,304,501 		JBrowse link
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249 		JBrowse link
G Kif5a kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr10:127,061,564...127,102,217
Ensembl chr10:127,061,565...127,099,217 		JBrowse link
G Kif5b kinesin family member 5B ISO RGD PMID:9349526 RGD:12792964 NCBI chr18:6,201,005...6,241,524
Ensembl chr18:6,201,002...6,242,174 		JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in IMP (MGI:5705162|PMID:26575286) UniProt PMID:26575286 MGI:5705162 NCBI chr 9:34,396,850...34,952,103
Ensembl chr 9:34,397,190...34,948,012 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IMP (PMID:10631168) MGI PMID:10631168 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Lhx5 LIM homeobox protein 5 acts_upstream_of_or_within IMP (PMID:10325223) MGI PMID:10325223 NCBI chr 5:120,569,951...120,579,522
Ensembl chr 5:120,569,764...120,579,288 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IMP (PMID:1638738) MGI PMID:1638738 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310 		JBrowse link
G Lrp8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor acts_upstream_of_or_within IGI (PMID:17330141) MGI PMID:17330141 NCBI chr 4:107,659,337...107,734,037
Ensembl chr 4:107,659,066...107,734,037 		JBrowse link
G Mas1 MAS1 oncogene ISO RGD PMID:1521325 RGD:2316795 NCBI chr17:13,056,981...13,087,037
Ensembl chr17:13,059,966...13,087,030 		JBrowse link
G Mdk midkine involved_in IMP (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chr 2:91,760,149...91,762,348
Ensembl chr 2:91,760,150...91,762,642 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:14751287 RGD:12743658 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid involved_in IDA (MGI:5571501|PMID:24828044) BHF-UCL PMID:24828044 MGI:5571501 NCBI chr 4:122,840,643...122,855,844
Ensembl chr 4:122,840,643...122,854,981 		JBrowse link
G Mkks McKusick-Kaufman syndrome acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 2:136,715,700...136,733,422
Ensembl chr 2:136,715,700...136,733,309 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:22085911 RGD:5688137 NCBI chr12:4,297,362...4,569,452
Ensembl chr12:4,297,362...4,527,182 		JBrowse link
G Nefh neurofilament, heavy polypeptide ISO RGD PMID:14620872 RGD:9743946 NCBI chr11:4,888,754...4,898,064
Ensembl chr11:4,888,754...4,898,064 		JBrowse link
G Nefl neurofilament, light polypeptide ISO RGD PMID:14620872 RGD:9743946 NCBI chr14:68,321,312...68,326,544
Ensembl chr14:68,321,312...68,326,544 		JBrowse link
G Nefm neurofilament, medium polypeptide ISO RGD PMID:14620872 RGD:9743946 NCBI chr14:68,356,994...68,362,453
Ensembl chr14:68,320,039...68,362,295 		JBrowse link
G Nf2 neurofibromin 2 acts_upstream_of_or_within IMP (PMID:23863479) MGI PMID:23863479 NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:18477394), (PMID:23042739), (PMID:23776487), (PMID:23964093) MGI PMID:18477394 PMID:23042739 PMID:23776487 PMID:23964093 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:11163262) MGI PMID:11163262 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 ISO RGD PMID:18493952 RGD:2302825 NCBI chr11:93,849,751...93,859,341
Ensembl chr11:93,847,805...93,859,347 		JBrowse link
G Nog noggin ISO RGD PMID:15171992 RGD:10416525 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within IMP (PMID:15456880) MGI PMID:15456880 NCBI chr 4:48,045,098...48,086,446
Ensembl chr 4:48,045,153...48,086,447 		JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 acts_upstream_of_or_within IMP
IGI		 (PMID:10729324)
(PMID:17330141)		 MGI PMID:10729324 PMID:17330141 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:18493952 RGD:2302825 NCBI chr 5:117,420,716...117,425,629
Ensembl chr 5:117,420,719...117,425,690 		JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:20819118 RGD:8693633 NCBI chr 1:106,099,599...106,321,975
Ensembl chr 1:106,099,482...106,321,980 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 ISO RGD PMID:20819118 RGD:8693633 NCBI chr 8:110,595,149...110,671,303
Ensembl chr 8:110,595,174...110,671,303 		JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within IMP (PMID:11683995) MGI PMID:11683995 NCBI chr  X:73,372,644...73,388,295
Ensembl chr  X:73,372,672...73,388,295 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B ISO RGD PMID:21123436 RGD:10043818 NCBI chr11:94,882,038...94,897,724
Ensembl chr11:94,881,861...94,897,725 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IMP (PMID:15842738) MGI PMID:15842738 NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483 		JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z, polypeptide 1 ISO RGD PMID:10906718 RGD:9589828 NCBI chr 6:22,875,302...23,052,915
Ensembl chr 6:22,875,501...23,052,915 		JBrowse link
G Ran RAN, member RAS oncogene family ISO RGD PMID:18493952 RGD:2302825 NCBI chr 5:129,097,264...129,101,388
Ensembl chr 5:129,097,133...129,101,387 		JBrowse link
G Rara retinoic acid receptor, alpha ISO RGD PMID:18619947 RGD:8693612 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Reln reelin involved_in IDA (MGI:3765383|PMID:17229826) BHF-UCL PMID:17229826 MGI:3765383 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Sct secretin involved_in IMP (MGI:3814626|PMID:18534766) UniProt PMID:18534766 MGI:3814626 NCBI chr 7:140,858,243...140,859,082
Ensembl chr 7:140,858,243...140,859,046 		JBrowse link
G Sema6b sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B involved_in IMP (MGI:4454564|PMID:20484647) UniProt PMID:20484647 MGI:4454564 NCBI chr17:56,430,085...56,447,343
Ensembl chr17:56,430,085...56,447,343 		JBrowse link
G Slc17a6 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 ISO RGD PMID:18502731 RGD:9999204 NCBI chr 7:51,271,578...51,320,874
Ensembl chr 7:51,271,754...51,320,867 		JBrowse link
G Slc32a1 solute carrier family 32 (GABA vesicular transporter), member 1 ISO RGD PMID:18502731 RGD:9999204 NCBI chr 2:158,449,158...158,457,667
Ensembl chr 2:158,452,687...158,457,668 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr13:69,721,568...69,759,611
Ensembl chr13:69,721,568...69,759,561 		JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 ISO RGD PMID:21047951 RGD:4145527 NCBI chr17:74,321,886...74,354,855
Ensembl chr17:74,323,950...74,354,911 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:15837932) MGI PMID:15837932 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO RGD PMID:24074826 RGD:9684936 NCBI chr13:93,282,363...93,330,662
Ensembl chr13:93,282,790...93,328,893 		JBrowse link
G Trp73 transformation related protein 73 acts_upstream_of_or_within IMP (PMID:10716451) MGI PMID:10716451 NCBI chr 4:154,140,706...154,224,332
Ensembl chr 4:154,140,706...154,224,665 		JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within IMP (PMID:17522300) MGI PMID:17522300 NCBI chr 2:28,531,005...28,581,183
Ensembl chr 2:28,531,240...28,581,179 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in IMP (MGI:6478862|PMID:31983064) UniProt PMID:31983064 MGI:6478862 NCBI chr 7:97,999,875...98,010,602
Ensembl chr 7:97,999,875...98,010,535 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in IMP (PMID:17218254) MGI PMID:17218254 NCBI chr15:98,847,728...98,851,382
Ensembl chr15:98,847,718...98,851,584 		JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within IMP (PMID:23499007) MGI PMID:23499007 NCBI chr 5:86,258,579...86,320,602
Ensembl chr 5:86,257,146...86,320,662 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:53,318,749...53,321,658
Ensembl chr11:53,318,749...53,321,658 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X chromosome acts_upstream_of_or_within IMP (PMID:23861879) MGI PMID:23861879 NCBI chr  X:12,937,221...13,039,567
Ensembl chr  X:12,937,737...13,039,567 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IMP (PMID:10631167) MGI PMID:10631167 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 acts_upstream_of_or_within IMP (PMID:19633665) MGI PMID:19633665 NCBI chr 7:24,246,124...24,272,863
Ensembl chr 7:24,245,714...24,272,865 		JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:23933240 RGD:9684963 NCBI chr 2:146,854,672...146,919,922
Ensembl chr 2:146,854,916...146,919,920 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide acts_upstream_of_or_within IMP (PMID:12796778) MGI PMID:12796778 NCBI chr11:75,620,121...75,656,667
Ensembl chr11:75,623,695...75,656,671 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within IMP (PMID:19409883) MGI PMID:19409883 NCBI chr 1:177,269,892...177,278,330
Ensembl chr 1:177,269,917...177,278,330 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IMP (PMID:17644613) MGI PMID:17644613 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407 		JBrowse link
G Zic1 zinc finger protein of the cerebellum 1 involved_in IGI (PMID:17507568) MGI PMID:17507568 NCBI chr 9:91,240,111...91,250,136
Ensembl chr 9:91,240,111...91,247,863 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IGI (PMID:17507568) MGI PMID:17507568 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
hypoglossal nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IMP (PMID:21533046) MGI PMID:21533046 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983 		JBrowse link
hypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prop1 paired like homeodomain factor 1 acts_upstream_of_or_within IMP (PMID:16678101) MGI PMID:16678101 NCBI chr11:50,841,633...50,844,584
Ensembl chr11:50,841,633...50,844,592 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:15037319) MGI PMID:15037319 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
hypothalamus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hap1 huntingtin-associated protein 1 involved_in IMP (MGI:5560429|PMID:24355921) UniProt PMID:24355921 MGI:5560429 NCBI chr11:100,238,153...100,247,808
Ensembl chr11:100,238,153...100,246,954 		JBrowse link
G Otp orthopedia homeobox acts_upstream_of_or_within IMP (PMID:10557207) MGI PMID:10557207 NCBI chr13:95,012,144...95,021,633
Ensembl chr13:95,012,110...95,021,638 		JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 acts_upstream_of_or_within IMP (PMID:8543156) MGI PMID:8543156 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366 		JBrowse link
G Prdm13 PR domain containing 13 involved_in IMP (MGI:6836711|PMID:34730112) UniProt PMID:34730112 MGI:6836711 NCBI chr 4:21,675,865...21,685,963
Ensembl chr 4:21,677,480...21,685,963 		JBrowse link
G Prop1 paired like homeodomain factor 1 acts_upstream_of_or_within IMP (PMID:9067988) MGI PMID:9067988 NCBI chr11:50,841,633...50,844,584
Ensembl chr11:50,841,633...50,844,592 		JBrowse link
hypothalamus cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IMP (MGI:4887555|PMID:19046377) UniProt PMID:19046377 MGI:4887555 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:18206388) MGI PMID:18206388 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
hypothalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2-associated X protein acts_upstream_of_or_within IMP (PMID:15342910) MGI PMID:15342910 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin acts_upstream_of_or_within IMP (PMID:30498428) MGI PMID:30498428 NCBI chr 2:122,580,425...122,591,407
Ensembl chr 2:122,580,423...122,591,395 		JBrowse link
G Crh corticotropin releasing hormone ISO RGD PMID:20002962 RGD:5130950 NCBI chr 3:19,747,565...19,749,560
Ensembl chr 3:19,747,565...19,749,560 		JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 ISO RGD PMID:20002962 RGD:5130950 NCBI chr11:104,021,289...104,066,349
Ensembl chr11:104,023,681...104,066,349 		JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:20002962 RGD:5130950 NCBI chr 6:55,067,033...55,110,001
Ensembl chr 6:55,067,034...55,110,001 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (PMID:32868762) MGI PMID:32868762 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 ISO RGD PMID:15804399 RGD:4891928 NCBI chr 9:54,073,221...54,175,448
Ensembl chr 9:54,073,221...54,175,394 		JBrowse link
G Esr2 estrogen receptor 2 (beta) ISO RGD PMID:12960049 RGD:1582276 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033 		JBrowse link
G Ets1 E26 avian leukemia oncogene 1, 5' domain ISO RGD PMID:8946059 RGD:2313681 NCBI chr 9:32,547,501...32,669,116
Ensembl chr 9:32,547,517...32,669,116 		JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within IMP (PMID:8631293) MGI PMID:8631293 NCBI chr 5:147,125,492...147,127,753
Ensembl chr 5:147,125,506...147,127,757 		JBrowse link
G Myc myelocytomatosis oncogene ISO RGD PMID:23291449 RGD:7207858 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:12551846 RGD:5688241 NCBI chr12:4,297,362...4,569,452
Ensembl chr12:4,297,362...4,527,182 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IMP (PMID:32868762) MGI PMID:32868762 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nkx2-6 NK2 homeobox 6 involved_in IEP (MGI:1267297|PMID:9621431) BHF-UCL PMID:9621431 MGI:1267297 NCBI chr14:69,409,251...69,412,989
Ensembl chr14:69,409,251...69,412,967 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:127,796,492...127,871,612
Ensembl chr 1:127,796,510...127,871,605 		JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within IMP (PMID:925203) MGI PMID:925203 NCBI chr18:66,067,710...66,072,160
Ensembl chr18:66,061,348...66,072,858 		JBrowse link
G Reln reelin ISO RGD PMID:10436054 RGD:634730 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Sox3 SRY (sex determining region Y)-box 3 involved_in IMP (MGI:3033563|PMID:14981518) UniProt PMID:14981518 MGI:3033563 NCBI chr  X:59,934,972...59,937,045
Ensembl chr  X:59,934,972...59,937,036 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 PMID:15804399 RGD:4891928 RGD:4892048 NCBI chr13:69,721,568...69,759,611
Ensembl chr13:69,721,568...69,759,561 		JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 ISO RGD PMID:15804399 RGD:4891928 NCBI chr17:74,321,886...74,354,855
Ensembl chr17:74,323,950...74,354,911 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:53,318,749...53,321,658
Ensembl chr11:53,318,749...53,321,658 		JBrowse link
hypothalamus gonadotrophin-releasing hormone neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within_positive_effect IMP (MGI:5504302|PMID:23785158) UniProt PMID:23785158 MGI:5504302 NCBI chr 3:101,917,425...101,922,808
Ensembl chr 3:101,917,392...101,922,808 		JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within IMP (PMID:18299572) MGI PMID:18299572 NCBI chr11:62,442,329...62,444,037
Ensembl chr11:62,441,997...62,444,039 		JBrowse link
inferior colliculus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IMP (MGI:1931655|PMID:11170346) UniProt PMID:11170346 MGI:1931655 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
G Tfap2d transcription factor AP-2, delta acts_upstream_of_or_within IMP (PMID:21858141) MGI PMID:21858141 NCBI chr 1:19,173,246...19,244,172
Ensembl chr 1:19,173,246...19,236,570 		JBrowse link
interkinetic nuclear migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep120 centrosomal protein 120 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:17920017) MGI
GO_Central		 PMID:17920017 GO_REF:0000033 NCBI chr18:53,814,795...53,877,825
Ensembl chr18:53,814,795...53,877,680 		JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in IMP (MGI:5447899|PMID:22842144) UniProt PMID:22842144 MGI:5447899 NCBI chr 4:98,824,669...99,019,190
Ensembl chr 4:98,824,908...99,009,152 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IMP (PMID:16364283) MGI PMID:16364283 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Hook3 hook microtubule tethering protein 3 acts_upstream_of_or_within IMP (PMID:20152126) MGI PMID:20152126 NCBI chr 8:26,511,449...26,609,646
Ensembl chr 8:26,511,449...26,609,252 		JBrowse link
G Kif1a kinesin family member 1A involved_in ISO RGD
MGI		 PMID:21037580 GO_REF:0000096 MGI:4417868 RGD:13204706 NCBI chr 1:92,943,180...93,029,760
Ensembl chr 1:92,943,186...93,029,673 		JBrowse link
G Pax6 paired box 6 involved_in ISO RGD
MGI		 PMID:17825043 GO_REF:0000096 MGI:4417868 RGD:8552353 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pcm1 pericentriolar material 1 acts_upstream_of_or_within IMP (PMID:20152126) MGI PMID:20152126 NCBI chr 8:41,692,521...41,787,125
Ensembl chr 8:41,692,789...41,785,381 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 acts_upstream_of_or_within IMP (PMID:17920017) MGI PMID:17920017 NCBI chr 8:25,644,568...25,730,901
Ensembl chr 8:25,644,568...25,746,604 		JBrowse link
G Tacc2 transforming, acidic coiled-coil containing protein 2 acts_upstream_of_or_within IMP (PMID:17920017) MGI PMID:17920017 NCBI chr 7:130,154,735...130,369,435
Ensembl chr 7:130,179,168...130,366,515 		JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 acts_upstream_of_or_within IMP (PMID:17920017) MGI PMID:17920017 NCBI chr 5:33,814,808...33,836,331
Ensembl chr 5:33,815,472...33,836,339 		JBrowse link
interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor-like 13B involved_in IMP (MGI:5460933|PMID:23153492) UniProt PMID:23153492 MGI:5460933 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
lateral ganglionic eminence cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:20943929) MGI PMID:20943929 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
lateral geniculate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within IMP (PMID:12097474) MGI PMID:12097474 NCBI chr 3:89,660,755...89,671,939
Ensembl chr 3:89,653,502...89,671,939 		JBrowse link
lateral ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in IEP (MGI:3608308|PMID:16133142) UniProt PMID:16133142 MGI:3608308 NCBI chr 6:55,313,284...55,325,540
Ensembl chr 6:55,313,417...55,325,540 		JBrowse link
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide acts_upstream_of_or_within IMP (MGI:69165|PMID:7525597) ARUK-UCL PMID:7525597 MGI:69165 NCBI chr11:69,490,554...69,496,786
Ensembl chr11:69,490,562...69,496,768 		JBrowse link
G Dbi diazepam binding inhibitor acts_upstream_of_or_within IDA (PMID:17150371) MGI PMID:17150371 NCBI chr 1:120,041,010...120,048,826
Ensembl chr 1:120,041,010...120,048,808 		JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 acts_upstream_of_or_within IMP (PMID:11912187) MGI PMID:11912187 NCBI chr15:28,155,000...28,472,191
Ensembl chr15:28,203,898...28,472,198 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within IMP (PMID:20080492) MGI PMID:20080492 NCBI chr19:45,549,018...45,566,728
Ensembl chr19:45,549,054...45,568,202 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle acts_upstream_of_or_within IMP (PMID:10712438)
(PMID:11283949), (PMID:9356462)		 MGI PMID:9356462 PMID:10712438 PMID:11283949 NCBI chr11:68,581,228...68,707,451
Ensembl chr11:68,582,385...68,707,458 		JBrowse link
G Nfix nuclear factor I/X involved_in
acts_upstream_of_or_within		 IMP (PMID:25960350)
(PMID:29452604)		 MGI PMID:25960350 PMID:29452604 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Numb NUMB endocytic adaptor protein involved_in IMP (MGI:3763347|PMID:17174898) UniProt PMID:17174898 MGI:3763347 NCBI chr12:83,840,808...83,968,708
Ensembl chr12:83,840,808...83,968,708 		JBrowse link
G Numbl numb-like involved_in IMP (MGI:3763347|PMID:17174898) UniProt PMID:17174898 MGI:3763347 NCBI chr 7:26,957,884...26,981,570
Ensembl chr 7:26,957,858...26,981,569 		JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within IMP (PMID:23349049) MGI PMID:23349049 NCBI chr 4:44,524,748...44,710,694
Ensembl chr 4:44,524,757...44,710,487 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17558409) MGI PMID:17558409 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within IMP (PMID:21055390) MGI PMID:21055390 NCBI chr 7:97,999,875...98,010,602
Ensembl chr 7:97,999,875...98,010,535 		JBrowse link
G Uchl5 ubiquitin carboxyl-terminal esterase L5 involved_in IMP (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr 1:143,652,993...143,683,204
Ensembl chr 1:143,653,010...143,683,204 		JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IMP (MGI:3796260|PMID:18509043) UniProt PMID:18509043 MGI:3796260 NCBI chr 8:95,701,321...95,740,836
Ensembl chr 8:95,701,379...95,740,845 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:11517264) MGI PMID:11517264 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010 		JBrowse link
G Cdk5r2 cyclin dependent kinase 5, regulatory subunit 2 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr 1:74,894,188...74,896,891
Ensembl chr 1:74,894,093...74,896,891 		JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in IMP (PMID:22235340) MGI PMID:22235340 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:20503375) MGI PMID:20503375 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dab2ip disabled 2 interacting protein involved_in IMP (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chr 2:35,448,285...35,621,006
Ensembl chr 2:35,448,278...35,621,006 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IMP (PMID:19342486) MGI PMID:19342486 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:21525285) MGI PMID:21525285 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Lrp8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor acts_upstream_of_or_within IGI (PMID:17330141) MGI PMID:17330141 NCBI chr 4:107,659,337...107,734,037
Ensembl chr 4:107,659,066...107,734,037 		JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within IMP (PMID:23097495) MGI PMID:23097495 NCBI chr 7:3,680,788...3,696,188
Ensembl chr 7:3,680,788...3,696,522 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:15385616) MGI PMID:15385616 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 acts_upstream_of_or_within IGI (PMID:17330141) MGI PMID:17330141 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Reln reelin acts_upstream_of_or_within IMP (PMID:20847152) MGI PMID:20847152 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within IMP (PMID:24210661) MGI PMID:24210661 NCBI chr11:97,253,044...97,289,368
Ensembl chr11:97,253,261...97,289,368 		JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:34235142) MGI PMID:34235142 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
limbic system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap2 contactin associated protein-like 2 involved_in IEP (MGI:4410430|PMID:18179895) BHF-UCL PMID:18179895 MGI:4410430 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:17473172) MGI PMID:17473172 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2a paired-like homeobox 2a acts_upstream_of_or_within IMP (PMID:21068058)
(PMID:9115735)		 MGI PMID:9115735 PMID:21068058 NCBI chr 7:101,467,520...101,471,933
Ensembl chr 7:101,467,520...101,471,933 		JBrowse link
mammillary axonal complex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IMP (PMID:25741725) MGI PMID:25741725 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407 		JBrowse link
mammillary body development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IMP
IEP		 (MGI:3589689|PMID:15654859)
(MGI:1931655|PMID:11170346)		 UniProt PMID:11170346 PMID:15654859 MGI:1931655 MGI:3589689 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
mammillothalamic axonal tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IMP (MGI:1352733|PMID:10662642), (MGI:1931655|PMID:11170346) UniProt PMID:10662642 PMID:11170346 MGI:1352733 MGI:1931655 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
medial motor column neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx3 LIM homeobox protein 3 acts_upstream_of_or_within IGI (PMID:9865699) MGI PMID:9865699 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301 		JBrowse link
G Lhx4 LIM homeobox protein 4 acts_upstream_of_or_within IGI (PMID:9865699) MGI PMID:9865699 NCBI chr 1:155,573,777...155,627,481
Ensembl chr 1:155,573,777...155,627,430 		JBrowse link
medullary reticular formation development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b involved_in IEP (MGI:1098916|PMID:9374403) BHF-UCL PMID:9374403 MGI:1098916 NCBI chr 5:67,251,751...67,256,399
Ensembl chr 5:67,251,742...67,256,644 		JBrowse link
metencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a K(lysine) acetyltransferase 2A acts_upstream_of_or_within IMP (PMID:17325035) MGI PMID:17325035 NCBI chr11:100,595,572...100,603,293
Ensembl chr11:100,595,572...100,603,291 		JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within IGI (PMID:20816794) MGI PMID:20816794 NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IGI (PMID:20816794) MGI PMID:20816794 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IMP (PMID:2205396) MGI PMID:2205396 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
microglia development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO RGD
MGI		 PMID:33450391 GO_REF:0000096 MGI:4417868 RGD:126781687 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221 		JBrowse link
G Itgam integrin alpha M acts_upstream_of_or_within IDA (PMID:20578039) MGI PMID:20578039 NCBI chr 7:127,661,812...127,717,663
Ensembl chr 7:127,661,812...127,717,663 		JBrowse link
G Nrros negative regulator of reactive oxygen species involved_in IMP (MGI:6141908|PMID:28459434), (MGI:6192878|PMID:29909984) UniProt PMID:28459434 PMID:29909984 MGI:6141908 MGI:6192878 NCBI chr16:31,961,603...31,984,412
Ensembl chr16:31,961,603...31,984,412 		JBrowse link
G Tlr2 toll-like receptor 2 involved_in IGI (MGI:5307186|PMID:22198949) ARUK-UCL PMID:22198949 MGI:5307186 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074 		JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within IGI
IMP		 (PMID:24038504) MGI PMID:24038504 NCBI chr 3:102,642,086...102,679,626
Ensembl chr 3:102,641,845...102,708,829 		JBrowse link
microglia differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:23717624) MGI PMID:23717624 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within IMP (PMID:17954912) MGI PMID:17954912 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273 		JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within IMP (PMID:27654426) MGI PMID:27654426 NCBI chr 3:40,772,500...40,801,322
Ensembl chr 3:40,772,538...40,801,321 		JBrowse link
G Myd88 myeloid differentiation primary response gene 88 acts_upstream_of_or_within IMP (PMID:18509511) MGI PMID:18509511 NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:18509511) MGI PMID:18509511 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IMP (PMID:29654250) MGI PMID:29654250 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IMP (PMID:29890290) MGI PMID:29890290 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474 		JBrowse link
G Qki quaking, KH domain containing RNA binding involved_in IMP (MGI:6514532|PMID:33378678) UniProt PMID:33378678 MGI:6514532 NCBI chr17:10,425,480...10,538,706
Ensembl chr17:10,421,530...10,538,783 		JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within IMP (PMID:18509511) MGI PMID:18509511 NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521 		JBrowse link
G Vps13a vacuolar protein sorting 13A acts_upstream_of_or_within IMP (PMID:37714309) MGI PMID:37714309 NCBI chr19:16,592,730...16,758,433
Ensembl chr19:16,592,730...16,758,297 		JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (PMID:29890290) MGI PMID:29890290 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136 		JBrowse link
midbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor, type IC ISO RGD PMID:8940033 RGD:631880 NCBI chr 2:58,157,465...58,247,909
Ensembl chr 2:58,157,465...58,247,907 		JBrowse link
G Aplp2 amyloid beta precursor-like protein 2 acts_upstream_of_or_within IGI (PMID:15689559) MGI PMID:15689559 NCBI chr 9:31,060,853...31,123,144
Ensembl chr 9:31,060,853...31,123,111 		JBrowse link
G Barhl1 BarH like homeobox 1 acts_upstream_of_or_within IMP (PMID:16752387) MGI PMID:16752387 NCBI chr 2:28,797,692...28,807,996
Ensembl chr 2:28,797,691...28,806,680 		JBrowse link
G Cma1 chymase 1, mast cell ISO RGD PMID:21396433 RGD:5128663 NCBI chr14:56,178,908...56,182,132
Ensembl chr14:56,178,908...56,182,132 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (MGI:1931800|PMID:11262227) ParkinsonsUK-UCL PMID:11262227 MGI:1931800 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Cxcl5 C-X-C motif chemokine ligand 5 ISO RGD PMID:18436867 RGD:4892032 NCBI chr 5:90,907,157...90,909,484
Ensembl chr 5:90,907,219...90,909,483 		JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 ISO RGD PMID:18436867 RGD:4892032 NCBI chr 1:74,193,153...74,200,405
Ensembl chr 1:74,193,150...74,200,405 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within IMP (PMID:17765678) MGI PMID:17765678 NCBI chr14:24,184,021...24,295,988
Ensembl chr14:24,184,021...24,295,988 		JBrowse link
G En1 engrailed 1 involved_in
acts_upstream_of_or_within		 IGI (MGI:82938|PMID:8848044)
(PMID:15175251), (PMID:15607945)		 ParkinsonsUK-UCL
MGI		 PMID:8848044 PMID:15175251 PMID:15607945 MGI:82938 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G En2 engrailed 2 acts_upstream_of_or_within IGI (PMID:15175251), (PMID:15607945) MGI PMID:15175251 PMID:15607945 NCBI chr 5:28,370,694...28,377,195
Ensembl chr 5:28,370,692...28,377,164 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP
IGI		 (PMID:17687036) MGI PMID:17687036 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IGI (PMID:17687036) MGI PMID:17687036 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxb1 forkhead box B1 involved_in IMP (MGI:1931655|PMID:11170346) UniProt PMID:11170346 MGI:1931655 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within IGI (PMID:19842188) MGI PMID:19842188 NCBI chr14:65,429,890...65,499,912
Ensembl chr14:65,429,898...65,499,912 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within IGI (PMID:19842188) MGI PMID:19842188 NCBI chr15:38,869,673...38,901,587
Ensembl chr15:38,869,429...38,901,583 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within IMP (PMID:10693795) MGI PMID:10693795 NCBI chr12:8,347,918...8,351,954
Ensembl chr12:8,347,918...8,351,954 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IGI (PMID:11500373) MGI PMID:11500373 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within IGI (PMID:11500373) MGI PMID:11500373 NCBI chr 4:152,369,707...152,376,133
Ensembl chr 4:152,370,429...152,376,119 		JBrowse link
G Kat2a K(lysine) acetyltransferase 2A acts_upstream_of_or_within IMP (PMID:17325035) MGI PMID:17325035 NCBI chr11:100,595,572...100,603,293
Ensembl chr11:100,595,572...100,603,291 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IMP (PMID:21752929) MGI PMID:21752929 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within IMP (PMID:21752929) MGI PMID:21752929 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:11029008) MGI PMID:11029008 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IMP (PMID:15188430) MGI PMID:15188430 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 acts_upstream_of_or_within IGI (PMID:16020517) MGI PMID:16020517 NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722 		JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within IGI (PMID:15201224), (PMID:20816794) MGI PMID:15201224 PMID:20816794 NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IMP
IGI		 (PMID:15888661)
(PMID:15201224), (PMID:20816794)
(PMID:15201223)		 MGI PMID:15201223 PMID:15201224 PMID:15888661 PMID:20816794 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Phox2a paired-like homeobox 2a acts_upstream_of_or_within IMP (PMID:21752929) MGI PMID:21752929 NCBI chr 7:101,467,520...101,471,933
Ensembl chr 7:101,467,520...101,471,933 		JBrowse link
G Pitx3 paired-like homeodomain transcription factor 3 involved_in
acts_upstream_of_or_within		 IMP (MGI:3582099|PMID:15950611)
(PMID:14973278), (PMID:17919745)		 UniProt
MGI		 PMID:14973278 PMID:15950611 PMID:17919745 MGI:3582099 NCBI chr19:46,123,720...46,136,764
Ensembl chr19:46,124,124...46,136,765 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IGI (PMID:16020517) MGI PMID:16020517 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smad1 SMAD family member 1 acts_upstream_of_or_within IMP (PMID:15899870) MGI PMID:15899870 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147 		JBrowse link
G Smad9 SMAD family member 9 acts_upstream_of_or_within IMP (PMID:15899870) MGI PMID:15899870 NCBI chr 3:54,662,873...54,709,162
Ensembl chr 3:54,663,003...54,708,678 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:26637982) ParkinsonsUK-UCL PMID:26637982 NCBI chr  X:100,576,335...100,644,635
Ensembl chr  X:100,576,279...100,644,640 		JBrowse link
G Tal2 T cell acute lymphocytic leukemia 2 acts_upstream_of_or_within IMP (PMID:11071772) MGI PMID:11071772 NCBI chr 4:53,779,701...53,788,712
Ensembl chr 4:53,779,705...53,788,712 		JBrowse link
G Uchl5 ubiquitin carboxyl-terminal esterase L5 involved_in IMP (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr 1:143,652,993...143,683,204
Ensembl chr 1:143,653,010...143,683,204 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:53,318,749...53,321,658
Ensembl chr11:53,318,749...53,321,658 		JBrowse link
G Wls wntless WNT ligand secretion mediator involved_in IMP (MGI:4834980|PMID:20614471) ParkinsonsUK-UCL PMID:20614471 MGI:4834980 NCBI chr 3:159,545,287...159,644,302
Ensembl chr 3:159,545,309...159,644,300 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in
acts_upstream_of_or_within		 IMP
IDA		 (MGI:1931348|PMID:2202907), (MGI:82938|PMID:8848044)
(PMID:2205396)
(MGI:2679774|PMID:14557550)		 BHF-UCL
MGI
ParkinsonsUK-UCL		 PMID:2202907 PMID:2205396 PMID:8848044 PMID:14557550 MGI:1931348 MGI:2679774 MGI:82938 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IDA (MGI:2679774|PMID:14557550) ParkinsonsUK-UCL PMID:14557550 MGI:2679774 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IGI
IDA		 (MGI:5469218|PMID:23324743)
(MGI:2679774|PMID:14557550)		 CACAO
ParkinsonsUK-UCL		 PMID:14557550 PMID:23324743 MGI:2679774 MGI:5469218 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csnk1d casein kinase 1, delta involved_in IGI (MGI:3707948|PMID:17244647) ParkinsonsUK-UCL PMID:17244647 MGI:3707948 NCBI chr11:120,848,535...120,882,180
Ensembl chr11:120,849,816...120,882,156 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (MGI:3836885|PMID:19122665) ParkinsonsUK-UCL PMID:19122665 MGI:3836885 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 involved_in NAS (MGI:5700308|PMID:15748172) ParkinsonsUK-UCL PMID:15748172 MGI:5700308 NCBI chr16:20,335,694...20,352,763
Ensembl chr16:20,335,732...20,352,760 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in IDA (MGI:5705221|PMID:19951692) ParkinsonsUK-UCL PMID:19951692 MGI:5705221 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in IMP (MGI:3829860|PMID:18953410), (MGI:5466648|PMID:23109420) ParkinsonsUK-UCL PMID:18953410 PMID:23109420 MGI:3829860 MGI:5466648 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Ryk receptor-like tyrosine kinase involved_in IMP (MGI:5707582|PMID:23517308) ParkinsonsUK-UCL PMID:23517308 MGI:5707582 NCBI chr 9:102,712,119...102,785,506
Ensembl chr 9:102,712,116...102,785,504 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in IMP
IDA		 (MGI:5469218|PMID:23324743)
(MGI:5705221|PMID:19951692)		 ParkinsonsUK-UCL PMID:19951692 PMID:23324743 MGI:5469218 MGI:5705221 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IGI
IDA
IMP		 (MGI:5469218|PMID:23324743)
(MGI:2679774|PMID:14557550), (MGI:5700308|PMID:15748172), (MGI:5707582|PMID:23517308)
(MGI:3829860|PMID:18953410)		 ParkinsonsUK-UCL PMID:14557550 PMID:15748172 PMID:18953410 PMID:23324743 PMID:23517308 MGI:2679774 MGI:3829860 MGI:5469218 MGI:5700308 MGI:5707582 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
midbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within IMP (PMID:9030684) MGI PMID:9030684 NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882 		JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed 1 acts_upstream_of_or_within IMP (PMID:15607945) MGI PMID:15607945 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:17601531) MGI PMID:17601531 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:16651541) MGI PMID:16651541 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:11029008), (PMID:19795512) MGI PMID:11029008 PMID:19795512 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IMP (PMID:2205396) MGI PMID:2205396 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single-stranded DNA binding protein 3 involved_in IMP (MGI:3578570|PMID:15857913) UniProt PMID:15857913 MGI:3578570 NCBI chr 4:106,768,667...106,906,891
Ensembl chr 4:106,767,898...106,906,891 		JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IMP (PMID:8555108) MGI PMID:8555108 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:16651541) MGI PMID:16651541 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IGI (PMID:11500373) MGI PMID:11500373 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within IGI (PMID:11522634) MGI PMID:11522634 NCBI chr 4:152,369,707...152,376,133
Ensembl chr 4:152,370,429...152,376,119 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
negative regulation of astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in IGI (MGI:4415751|PMID:20005821) ARUK-UCL PMID:20005821 MGI:4415751 NCBI chr 9:21,634,872...21,661,215
Ensembl chr 9:21,634,779...21,661,215 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IMP (MGI:6283959|PMID:30792350) UniProt PMID:30792350 MGI:6283959 NCBI chr11:98,658,758...98,666,233
Ensembl chr11:98,658,758...98,666,159 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IDA (MGI:6152919|PMID:29407460) ARUK-UCL PMID:29407460 MGI:6152919 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175 		JBrowse link
negative regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in ISO RGD
MGI		 PMID:15829641 GO_REF:0000096 MGI:4417868 RGD:2302988 NCBI chr 7:44,461,680...44,466,082
Ensembl chr 7:44,461,680...44,466,082 		JBrowse link
G Dab1 disabled 1 acts_upstream_of_or_within IMP (PMID:18848628) MGI PMID:18848628 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Dll3 delta like canonical Notch ligand 3 involved_in ISO RGD
MGI		 PMID:16144902 GO_REF:0000096 MGI:4417868 RGD:1599776 NCBI chr 7:27,992,980...28,001,210
Ensembl chr 7:27,992,978...28,001,663 		JBrowse link
G F2 coagulation factor II involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:91,442,742...91,466,799
Ensembl chr 2:91,455,665...91,466,759 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within IMP (PMID:12574417) MGI PMID:12574417 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 acts_upstream_of_or_within IMP (PMID:24062445) MGI PMID:24062445 NCBI chr 1:135,087,988...135,095,419
Ensembl chr 1:135,087,972...135,095,419 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IDA (MGI:2655020|PMID:12666205) UniProt PMID:12666205 MGI:2655020 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within IDA (PMID:18640244) MGI PMID:18640244 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IGI (PMID:15882580) MGI PMID:15882580 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Kdm4a lysine (K)-specific demethylase 4A involved_in ISO RGD
MGI		 PMID:24747049 GO_REF:0000096 MGI:4417868 RGD:9587433 NCBI chr 4:117,994,154...118,037,216
Ensembl chr 4:117,994,154...118,037,240 		JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 involved_in ISO RGD
MGI		 PMID:16881068 GO_REF:0000096 MGI:4417868 RGD:9588644 NCBI chr18:74,400,676...74,415,808
Ensembl chr18:74,400,676...74,415,803 		JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in ISO RGD
MGI		 PMID:16881068 GO_REF:0000096 MGI:4417868 RGD:9588644 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of_or_within IDA (PMID:18640244) MGI PMID:18640244 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:11297510)
(PMID:10442636), (PMID:9878702)		 MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nog noggin involved_in IMP
ISO		 (MGI:3808973|PMID:18028109) BHF-UCL
MGI
RGD		 PMID:14975730 PMID:18028109 GO_REF:0000096 MGI:3808973 MGI:4417868 RGD:1358325 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:14702088) MGI PMID:14702088 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Ntrk3 neurotrophic tyrosine kinase, receptor, type 3 involved_in ISO RGD
MGI		 PMID:12075995 GO_REF:0000096 MGI:4417868 RGD:2325633 NCBI chr 7:77,825,711...78,228,865
Ensembl chr 7:77,825,707...78,387,760 		JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of_or_within IMP (PMID:25099998) MGI PMID:25099998 NCBI chr16:13,802,975...13,922,916
Ensembl chr16:13,804,468...13,919,364 		JBrowse link
negative regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IMP (MGI:3829860|PMID:18953410) ParkinsonsUK-UCL PMID:18953410 MGI:3829860 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
negative regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within IMP (PMID:20153830) MGI PMID:20153830 NCBI chr 7:141,006,359...141,009,475
Ensembl chr 7:141,006,359...141,009,404 		JBrowse link
G Slc6a4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 involved_in ISO RGD
MGI		 PMID:18573488 GO_REF:0000096 MGI:4417868 RGD:4889489 NCBI chr11:76,889,423...76,923,169
Ensembl chr11:76,889,429...76,923,166 		JBrowse link
negative regulation of establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 involved_in ISO RGD
MGI		 PMID:16056236 GO_REF:0000096 MGI:4417868 RGD:2317116 NCBI chr11:73,124,975...73,152,148
Ensembl chr11:73,125,118...73,152,068 		JBrowse link
G Ttpa tocopherol (alpha) transfer protein involved_in IMP (MGI:4461120|PMID:19923370) BHF-UCL PMID:19923370 MGI:4461120 NCBI chr 4:20,007,889...20,030,823
Ensembl chr 4:20,007,938...20,030,785 		JBrowse link
negative regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IMP
ISO		 (MGI:5708430|PMID:26147761) ARUK-UCL
MGI		 PMID:26147761 GO_REF:0000119 MGI:4834177 MGI:5708430 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Ptger3 prostaglandin E receptor 3 (subtype EP3) involved_in ISO RGD
MGI		 PMID:19555672 GO_REF:0000096 MGI:4417868 RGD:10043320 NCBI chr 3:157,272,459...157,350,392
Ensembl chr 3:157,272,529...157,351,525 		JBrowse link
negative regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO RGD
MGI		 PMID:16388796 PMID:22710965 GO_REF:0000096 MGI:4417868 RGD:2289009 RGD:9068402 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:19503085) MGI PMID:19503085 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Daam2 dishevelled associated activator of morphogenesis 2 involved_in IDA
IBA		 (MGI:5638274|PMID:25754822) UniProt
GO_Central		 PMID:25754822 GO_REF:0000033 MGI:5638274 NCBI chr17:49,763,050...49,871,517
Ensembl chr17:49,763,050...49,871,371 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within IGI (PMID:17678855), (PMID:23042297) MGI PMID:17678855 PMID:23042297 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IGI (PMID:17678855), (PMID:23042297) MGI PMID:17678855 PMID:23042297 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within IDA (PMID:9651217) MGI PMID:9651217 NCBI chr16:43,574,285...43,646,353
Ensembl chr16:43,574,389...43,643,295 		JBrowse link
G Dusp10 dual specificity phosphatase 10 involved_in ISO RGD
MGI		 PMID:19139271 GO_REF:0000096 MGI:4417868 RGD:7775012 NCBI chr 1:183,766,575...183,807,833
Ensembl chr 1:183,745,499...183,807,833 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IDA
ISO		 (MGI:2655020|PMID:12666205) UniProt
MGI
RGD		 PMID:12666205 GO_REF:0000096 MGI:2655020 MGI:4417868 RGD:9685388 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within		 IDA
IMP		 (MGI:2655020|PMID:12666205)
(PMID:17006542)		 UniProt
MGI		 PMID:12666205 PMID:17006542 MGI:2655020 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within IMP (PMID:11301021) MGI PMID:11301021 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:16862533) MGI PMID:16862533 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within IMP (PMID:15895088) MGI PMID:15895088 NCBI chr 9:56,525,743...56,704,355
Ensembl chr 9:56,525,759...56,703,752 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:15944386) MGI PMID:15944386 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within IGI (PMID:15629702) MGI PMID:15629702 NCBI chr 5:101,807,050...101,812,577
Ensembl chr 5:101,806,005...101,812,862 		JBrowse link
G Nkx6-2 NK6 homeobox 2 acts_upstream_of_or_within IGI (PMID:15629702) MGI PMID:15629702 NCBI chr 7:139,159,292...139,162,726
Ensembl chr 7:139,159,292...139,162,713 		JBrowse link
G Notch1 notch 1 involved_in IDA (MGI:2655020|PMID:12666205) UniProt PMID:12666205 MGI:2655020 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO RGD
MGI		 PMID:17344398 GO_REF:0000096 MGI:4417868 RGD:8553877 NCBI chr 7:28,466,192...28,488,086
Ensembl chr 7:28,466,160...28,488,086 		JBrowse link
G Tmem98 transmembrane protein 98 involved_in IMP (MGI:6258499|PMID:30249802) UniProt PMID:30249802 MGI:6258499 NCBI chr11:80,701,192...80,712,859
Ensembl chr11:80,701,001...80,712,859 		JBrowse link
neuroblast division in subventricular zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akna AT-hook transcription factor involved_in IDA
IBA		 (MGI:6294240|PMID:30787442) UniProt
GO_Central		 PMID:30787442 GO_REF:0000033 MGI:6294240 NCBI chr 4:63,285,364...63,328,988
Ensembl chr 4:63,285,362...63,321,591 		JBrowse link
G Numb NUMB endocytic adaptor protein involved_in IMP (MGI:3763347|PMID:17174898) UniProt PMID:17174898 MGI:3763347 NCBI chr12:83,840,808...83,968,708
Ensembl chr12:83,840,808...83,968,708 		JBrowse link
G Numbl numb-like involved_in IMP (MGI:3763347|PMID:17174898) UniProt PMID:17174898 MGI:3763347 NCBI chr 7:26,957,884...26,981,570
Ensembl chr 7:26,957,858...26,981,569 		JBrowse link
neurohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otp orthopedia homeobox acts_upstream_of_or_within IMP (PMID:10557207) MGI PMID:10557207 NCBI chr13:95,012,144...95,021,633
Ensembl chr13:95,012,110...95,021,638 		JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 acts_upstream_of_or_within IMP (PMID:8543156) MGI PMID:8543156 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366 		JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin B1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643 		JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide acts_upstream_of_or_within IMP (MGI:6368077|PMID:2438288) ARUK-UCL PMID:2438288 MGI:6368077 NCBI chr11:69,490,554...69,496,786
Ensembl chr11:69,490,562...69,496,768 		JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun1 Sad1 and UNC84 domain containing 1 involved_in IMP (MGI:4412315|PMID:19874786) UniProt PMID:19874786 MGI:4412315 NCBI chr 5:139,186,313...139,235,594
Ensembl chr 5:139,186,392...139,235,595 		JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in IMP (MGI:4412315|PMID:19874786) UniProt PMID:19874786 MGI:4412315 NCBI chr15:79,608,269...79,626,757
Ensembl chr15:79,608,271...79,626,737 		JBrowse link
G Syne2 spectrin repeat containing, nuclear envelope 2 involved_in IMP (MGI:4412315|PMID:19874786) UniProt PMID:19874786 MGI:4412315 NCBI chr12:75,865,092...76,157,702
Ensembl chr12:75,864,908...76,157,700 		JBrowse link
nucleus accumbens development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 acts_upstream_of_or_within IMP (PMID:17207476) MGI PMID:17207476 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
oculomotor nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr3 atypical chemokine receptor 3 involved_in IMP
ISO		 (MGI:6391997|PMID:31211835) UniProt
MGI		 PMID:31211835 GO_REF:0000119 MGI:4834177 MGI:6391997 NCBI chr 1:90,131,702...90,143,446
Ensembl chr 1:90,131,702...90,144,473 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IGI (PMID:11500373) MGI PMID:11500373 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within IGI (PMID:11500373) MGI PMID:11500373 NCBI chr 4:152,369,707...152,376,133
Ensembl chr 4:152,370,429...152,376,119 		JBrowse link
oculomotor nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2a paired-like homeobox 2a involved_in IMP (MGI:1098916|PMID:9374403) BHF-UCL PMID:9374403 MGI:1098916 NCBI chr 7:101,467,520...101,471,933
Ensembl chr 7:101,467,520...101,471,933 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in IMP (MGI:80519|PMID:8622766) UniProt PMID:8622766 MGI:80519 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding protein 1 involved_in IMP (MGI:2159417|PMID:11884758) UniProt PMID:11884758 MGI:2159417 NCBI chr13:59,597,348...59,705,184
Ensembl chr13:59,593,556...59,733,041 		JBrowse link
G Ak1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 2:32,511,770...32,525,070
Ensembl chr 2:32,511,770...32,525,070 		JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chr19:28,968,715...29,026,122
Ensembl chr19:28,998,233...29,025,361 		JBrowse link
G Arx aristaless related homeobox acts_upstream_of_or_within IMP (PMID:15677725) MGI PMID:15677725 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (PMID:19279158) MGI PMID:19279158 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Crtac1 cartilage acidic protein 1 acts_upstream_of_or_within IMP (PMID:21817055) MGI PMID:21817055 NCBI chr19:42,271,474...42,421,405
Ensembl chr19:42,256,726...42,420,224 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IMP (MGI:5430247|PMID:22542597) ParkinsonsUK-UCL PMID:22542597 MGI:5430247 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IMP (PMID:7590232) MGI PMID:7590232 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 ISO RGD PMID:14751288 RGD:2316247 NCBI chr14:67,040,313...67,148,490
Ensembl chr14:67,040,313...67,148,410 		JBrowse link
G Efna2 ephrin A2 ISO RGD PMID:12234653 RGD:634733 NCBI chr10:80,015,316...80,025,844
Ensembl chr10:80,015,316...80,025,844 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within IMP (PMID:19435790) MGI PMID:19435790 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:14605369) MGI PMID:14605369 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within IMP (PMID:16971467) MGI PMID:16971467 NCBI chr 6:23,245,043...23,250,942
Ensembl chr 6:23,245,043...23,248,361 		JBrowse link
G Fut1 fucosyltransferase 1 involved_in IMP (MGI:3701717|PMID:16884711) UniProt PMID:16884711 MGI:3701717 NCBI chr 7:45,266,862...45,270,483
Ensembl chr 7:45,266,713...45,270,483 		JBrowse link
G Gsx2 GS homeobox 2 involved_in IMP (PMID:28814342) MGI PMID:28814342 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within IMP (PMID:19109490) MGI PMID:19109490 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Kif14 kinesin family member 14 involved_in IMP (MGI:5485315|PMID:23308235), (MGI:5605219|PMID:24931760) UniProt PMID:23308235 PMID:24931760 MGI:5485315 MGI:5605219 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249 		JBrowse link
G Lhx2 LIM homeobox protein 2 acts_upstream_of_or_within IMP (PMID:19820705) MGI PMID:19820705 NCBI chr 2:38,229,282...38,259,747
Ensembl chr 2:38,229,293...38,259,745 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:91,556,994...91,700,327
Ensembl chr15:91,557,378...91,700,323 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:25331604) MGI PMID:25331604 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:12527005)
(PMID:11997145)		 MGI PMID:11997145 PMID:12527005 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Pax6 paired box 6 involved_in ISO RGD
MGI		 PMID:14736749 GO_REF:0000096 MGI:4417868 RGD:8552333 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:20096683) MGI PMID:20096683 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17558409) MGI PMID:17558409 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IMP (PMID:18024993) MGI PMID:18024993 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:13,174,789...13,653,453
Ensembl chr 5:13,175,381...13,652,533 		JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (PMID:11731796) MGI PMID:11731796 NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049 		JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within IGI (PMID:12097499) MGI PMID:12097499 NCBI chr19:41,586,263...41,735,714
Ensembl chr19:41,588,696...41,732,104 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within IGI (PMID:12097499) MGI PMID:12097499 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within IMP (PMID:21646512) MGI PMID:21646512 NCBI chr12:98,886,796...98,949,509
Ensembl chr12:98,886,833...98,949,497 		JBrowse link
G Zic1 zinc finger protein of the cerebellum 1 involved_in IGI (PMID:17507568) MGI PMID:17507568 NCBI chr 9:91,240,111...91,250,136
Ensembl chr 9:91,240,111...91,247,863 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IGI
IDA		 (PMID:17507568)
(PMID:28814342)		 MGI PMID:17507568 PMID:28814342 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within IMP (PMID:23090999) MGI PMID:23090999 NCBI chr 7:44,461,680...44,466,082
Ensembl chr 7:44,461,680...44,466,082 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IGI (MGI:3702250|PMID:17360927) UniProt PMID:17360927 MGI:3702250 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in IMP (MGI:3702250|PMID:17360927) UniProt PMID:17360927 MGI:3702250 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,889,765 		JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within IMP (PMID:18260139) MGI PMID:18260139 NCBI chr18:81,010,204...81,030,236
Ensembl chr18:81,009,591...81,029,986 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IMP (MGI:5285122|PMID:21539518) UniProt PMID:21539518 MGI:5285122 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within IMP (PMID:23090999) MGI PMID:23090999 NCBI chr 7:44,461,680...44,466,082
Ensembl chr 7:44,461,680...44,466,082 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:18184563) MGI PMID:18184563 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within IMP (PMID:25937343) MGI PMID:25937343 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IMP (MGI:3527369|PMID:15543145) UniProt PMID:15543145 MGI:3527369 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:11060228) MGI PMID:11060228 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Mir141 microRNA 141 acts_upstream_of_or_within ISO (PMID:18184563) MGI PMID:18184563 NCBI chr 6:124,694,877...124,694,948
Ensembl chr 6:124,694,877...124,694,948 		JBrowse link
G Mir200a microRNA 200a acts_upstream_of_or_within IDA
ISO		 (PMID:25937343)
(PMID:18184563)		 MGI PMID:18184563 PMID:25937343 NCBI chr 4:156,139,353...156,139,442
Ensembl chr 4:156,139,353...156,139,442 		JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within IDA
ISO		 (PMID:25937343)
(PMID:18184563)		 MGI PMID:18184563 PMID:25937343 NCBI chr 4:156,140,138...156,140,207
Ensembl chr 4:156,140,138...156,140,207 		JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO
IDA		 (PMID:18184563)
(PMID:25937343)		 MGI PMID:18184563 PMID:25937343 NCBI chr 6:124,695,285...124,695,353
Ensembl chr 6:124,695,285...124,695,353 		JBrowse link
G Mir376a microRNA 376a acts_upstream_of_or_within IDA (PMID:25937343) MGI PMID:25937343 NCBI chr12:109,690,215...109,690,282
Ensembl chr12:109,690,215...109,690,282 		JBrowse link
G Mir429 microRNA 429 acts_upstream_of_or_within ISO (PMID:18184563) MGI PMID:18184563 NCBI chr 4:156,138,362...156,138,444
Ensembl chr 4:156,138,362...156,138,444 		JBrowse link
G Mir9-1 microRNA 9-1 acts_upstream_of_or_within IDA (PMID:25937343) MGI PMID:25937343 NCBI chr 3:88,122,905...88,122,993
Ensembl chr 3:88,122,905...88,122,993 		JBrowse link
G Mir9-2 microRNA 9-2 acts_upstream_of_or_within IDA (PMID:25937343) MGI PMID:25937343 NCBI chr13:83,886,933...83,887,004
Ensembl chr13:83,886,933...83,887,004 		JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within IDA (PMID:25937343) MGI PMID:25937343 NCBI chr 7:79,155,012...79,155,101
Ensembl chr 7:79,155,012...79,155,101 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in IMP (MGI:4420747|PMID:18024993) UniProt PMID:18024993 MGI:4420747 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Uncx UNC homeobox acts_upstream_of_or_within IMP (PMID:20692344) MGI PMID:20692344 NCBI chr 5:139,529,620...139,533,934
Ensembl chr 5:139,529,249...139,533,934 		JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
G Pax6 paired box 6 involved_in ISO RGD
MGI		 PMID:14736749 GO_REF:0000096 MGI:4417868 RGD:8552333 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
olfactory cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase, Na+/K+ transporting, alpha 2 polypeptide acts_upstream_of_or_within IMP (MGI:2664023|PMID:12805306) ARUK-UCL PMID:12805306 MGI:2664023 NCBI chr 1:172,099,276...172,125,631
Ensembl chr 1:172,099,276...172,125,631 		JBrowse link
olfactory lobe development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within IMP (PMID:23090999) MGI PMID:23090999 NCBI chr 7:44,461,680...44,466,082
Ensembl chr 7:44,461,680...44,466,082 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within IMP (PMID:12926013) MGI PMID:12926013 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878 		JBrowse link
G Sema7a sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A acts_upstream_of_or_within IMP
IDA		 (PMID:12879062) MGI PMID:12879062 NCBI chr 9:57,846,879...57,870,148
Ensembl chr 9:57,847,395...57,870,148 		JBrowse link
oligodendrocyte cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:17678855) MGI PMID:17678855 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
oligodendrocyte cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Olig2 oligodendrocyte transcription factor 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:9828088) MGI PMID:9828088 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 acts_upstream_of_or_within IMP (PMID:17084361) MGI PMID:17084361 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031 		JBrowse link
oligodendrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:18287202) MGI PMID:18287202 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Cd9 CD9 antigen ISO RGD PMID:12420314 RGD:2326210 NCBI chr 6:125,437,229...125,471,723
Ensembl chr 6:125,437,229...125,471,754 		JBrowse link
G Cers5 ceramide synthase 5 ISO RGD PMID:21148554 RGD:156431059 NCBI chr15:99,633,473...99,670,396
Ensembl chr15:99,632,762...99,670,766 		JBrowse link
G Cers6 ceramide synthase 6 ISO RGD PMID:21148554 RGD:156431059 NCBI chr 2:68,691,489...68,944,628
Ensembl chr 2:68,691,785...68,944,626 		JBrowse link
G Eif2b1 eukaryotic translation initiation factor 2B, subunit alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:124,708,277...124,717,194
Ensembl chr 5:124,708,276...124,717,194 		JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B, subunit 2 beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:85,266,255...85,273,402
Ensembl chr12:85,266,255...85,273,402 		JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B, subunit 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:116,876,559...116,944,049
Ensembl chr 4:116,876,599...116,944,503 		JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B, subunit 4 delta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:31,344,902...31,350,483
Ensembl chr 5:31,344,902...31,350,774 		JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:20,317,544...20,328,073
Ensembl chr16:20,317,567...20,328,073 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within IMP (PMID:12574417) MGI PMID:12574417 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Gsn gelsolin ISO RGD PMID:7817780 RGD:1599870 NCBI chr 2:35,146,371...35,197,914
Ensembl chr 2:35,146,392...35,197,904 		JBrowse link
G Gstp1 glutathione S-transferase, pi 1 ISO RGD PMID:17681700 RGD:2317862 NCBI chr19:4,085,411...4,087,912
Ensembl chr19:4,085,407...4,087,985 		JBrowse link
G Hdac10 histone deacetylase 10 ISO RGD PMID:18627006 RGD:2306445 NCBI chr15:89,007,506...89,012,903
Ensembl chr15:89,007,510...89,012,903 		JBrowse link
G Hdac11 histone deacetylase 11 involved_in ISO RGD
MGI		 PMID:18627006 GO_REF:0000096 MGI:4417868 RGD:2306445 NCBI chr 6:91,133,652...91,151,674
Ensembl chr 6:91,133,647...91,151,674 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within IMP (PMID:17006542) MGI PMID:17006542 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within IMP (PMID:11301021) MGI PMID:11301021 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 acts_upstream_of_or_within IMP (PMID:17942730) MGI PMID:17942730 NCBI chr 1:172,168,777...172,201,652
Ensembl chr 1:172,168,777...172,201,652 		JBrowse link
G Kcnq3 potassium voltage-gated channel, subfamily Q, member 3 ISO RGD PMID:21750731 RGD:9686431 NCBI chr15:65,858,223...66,158,485
Ensembl chr15:65,858,236...66,158,491 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 ISO RGD PMID:11948806 RGD:10054294 NCBI chr 4:58,435,252...58,554,601
Ensembl chr 4:58,435,255...58,553,898 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:15504915 RGD:2303714 NCBI chr 4:3,676,865...3,791,613
Ensembl chr 4:3,678,115...3,813,122 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:26140854 RGD:11343660 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within IMP (PMID:23575864) MGI PMID:23575864 NCBI chr  X:100,317,697...100,342,540
Ensembl chr  X:100,317,636...100,341,071 		JBrowse link
G Met met proto-oncogene ISO RGD PMID:17382307 RGD:2317494 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
G Myrf myelin regulatory factor involved_in IDA
IMP		 (MGI:6450350|PMID:31828317)
(MGI:3850982|PMID:19596243), (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821)		 GO_Central
UniProt		 PMID:19596243 PMID:24204311 PMID:27532821 PMID:31828317 MGI:3850982 MGI:5544144 MGI:5805298 MGI:6450350 NCBI chr19:10,185,635...10,218,134
Ensembl chr19:10,185,636...10,218,112 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within IMP (PMID:11526078) MGI PMID:11526078 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163 		JBrowse link
G Nsun5 NOL1/NOP2/Sun domain family, member 5 involved_in IMP (MGI:6280591|PMID:30485550), (MGI:6359541|PMID:31174389) UniProt PMID:30485550 PMID:31174389 MGI:6280591 MGI:6359541 NCBI chr 5:135,398,784...135,405,661
Ensembl chr 5:135,398,807...135,405,659 		JBrowse link
G Olig1 oligodendrocyte transcription factor 1 involved_in IMP (MGI:5632010|PMID:25762682) CACAO PMID:25762682 MGI:5632010 NCBI chr16:91,066,657...91,068,827
Ensembl chr16:91,066,660...91,068,821 		JBrowse link
G Prdm8 PR domain containing 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:98,315,241...98,335,313
Ensembl chr 5:98,315,057...98,336,850 		JBrowse link
G Robo1 roundabout guidance receptor 1 ISO RGD PMID:22433866 RGD:243048458 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:8660874) MGI PMID:8660874 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sox10 SRY (sex determining region Y)-box 10 involved_in IMP (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:24204311 PMID:27532821 MGI:5544144 MGI:5805298 NCBI chr15:79,039,113...79,048,690
Ensembl chr15:79,039,108...79,049,440 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 ISO RGD PMID:9632656 RGD:68859 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IMP (PMID:19741146) MGI PMID:19741146 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in IMP (MGI:5619741|PMID:22384214) CACAO PMID:22384214 MGI:5619741 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tppp tubulin polymerization promoting protein involved_in IMP (MGI:6368053|PMID:31522887) UniProt PMID:31522887 MGI:6368053 NCBI chr13:74,157,538...74,183,872
Ensembl chr13:74,157,526...74,183,872 		JBrowse link
G Wasf3 WASP family, member 3 acts_upstream_of_or_within IMP (PMID:16723544) MGI PMID:16723544 NCBI chr 5:146,317,411...146,410,425
Ensembl chr 5:146,321,795...146,410,425 		JBrowse link
G Zfp488 zinc finger protein 488 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:16908628) MGI
GO_Central		 PMID:16908628 GO_REF:0000033 NCBI chr14:33,689,023...33,700,986
Ensembl chr14:33,689,027...33,700,721 		JBrowse link
oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 9630013A20Rik RIKEN cDNA 9630013A20 gene acts_upstream_of_or_within IDA (PMID:28041882) MGI PMID:28041882 NCBI chr14:84,696,164...84,713,864
Ensembl chr14:84,696,079...84,713,864 		JBrowse link
G Apoe apolipoprotein E ISO RGD PMID:21972082 RGD:6903911 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP
IGI		 (PMID:18287202)
(PMID:15976074)		 MGI PMID:15976074 PMID:18287202 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 ISO RGD PMID:12787069 RGD:631874 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bcl2l10 Bcl2-like 10 ISO RGD PMID:12787069 RGD:631874 NCBI chr 9:75,255,040...75,258,922
Ensembl chr 9:75,255,040...75,258,931 		JBrowse link
G Bnip3 BCL2/adenovirus E1B interacting protein 3 ISO RGD PMID:12787069 RGD:631874 NCBI chr 7:138,492,565...138,511,235
Ensembl chr 7:138,492,565...138,511,248 		JBrowse link
G Bok BCL2-related ovarian killer ISO RGD PMID:12787069 RGD:631874 NCBI chr 1:93,613,297...93,623,492
Ensembl chr 1:93,613,382...93,623,486 		JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Cdkn2c cyclin dependent kinase inhibitor 2C ISO RGD PMID:11969268 RGD:1298749 NCBI chr 4:109,518,073...109,523,953
Ensembl chr 4:109,518,073...109,524,386 		JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase acts_upstream_of_or_within IMP (PMID:19139271) MGI PMID:19139271 NCBI chr11:100,465,765...100,472,565
Ensembl chr11:100,465,730...100,482,555 		JBrowse link
G Csk c-src tyrosine kinase ISO RGD PMID:15504915 RGD:2303714 NCBI chr 9:57,533,929...57,560,758
Ensembl chr 9:57,533,929...57,560,914 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of IMP (PMID:19503085) MGI PMID:19503085 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of IGI (PMID:17678855), (PMID:23042297) MGI PMID:17678855 PMID:23042297 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of IGI (PMID:17678855), (PMID:23042297) MGI PMID:17678855 PMID:23042297 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of IDA (PMID:9651217) MGI PMID:9651217 NCBI chr16:43,574,285...43,646,353
Ensembl chr16:43,574,389...43,643,295 		JBrowse link
G Dusp10 dual specificity phosphatase 10 acts_upstream_of_or_within IMP (PMID:19139271) MGI PMID:19139271 NCBI chr 1:183,766,575...183,807,833
Ensembl chr 1:183,745,499...183,807,833 		JBrowse link
G Eed embryonic ectoderm development acts_upstream_of_or_within IMP (PMID:28041882) MGI PMID:28041882 NCBI chr 7:89,603,862...89,630,184
Ensembl chr 7:89,603,862...89,630,191 		JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21490970 RGD:5131646 NCBI chr18:34,994,260...34,998,009
Ensembl chr18:34,992,876...34,998,037 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within IMP (PMID:19139271) MGI PMID:19139271 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Exoc4 exocyst complex component 4 involved_in ISO RGD
MGI		 PMID:16478790 GO_REF:0000096 MGI:4417868 RGD:2314419 NCBI chr 6:33,226,025...33,950,914
Ensembl chr 6:33,226,020...33,950,914 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:15880651) MGI PMID:15880651 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gpr17 G protein-coupled receptor 17 ISO RGD PMID:24613411 RGD:13792699 NCBI chr18:32,076,052...32,082,925
Ensembl chr18:32,076,050...32,082,689 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO RGD
MGI		 PMID:24613411 GO_REF:0000096 MGI:4417868 RGD:13792699 NCBI chr19:4,336,029...4,356,356
Ensembl chr19:4,336,029...4,356,250 		JBrowse link
G Grk5 G protein-coupled receptor kinase 5 ISO RGD PMID:24613411 RGD:13792699 NCBI chr19:60,877,995...61,084,406
Ensembl chr19:60,878,187...61,084,406 		JBrowse link
G Hdac1 histone deacetylase 1 acts_upstream_of IGI (PMID:19503085) MGI PMID:19503085 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of IGI (PMID:19503085) MGI PMID:19503085 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of IMP (PMID:17006542) MGI PMID:17006542 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:14991837 RGD:9685479 NCBI chr 6:51,437,414...51,448,054
Ensembl chr 6:51,437,912...51,446,874 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of IMP (PMID:11301021) MGI PMID:11301021 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of IMP (PMID:16862533) MGI PMID:16862533 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of IMP (PMID:15895088) MGI PMID:15895088 NCBI chr 9:56,525,743...56,704,355
Ensembl chr 9:56,525,759...56,703,752 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:20697302 RGD:12789708 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Mios meiosis regulator for oocyte development involved_in IMP (MGI:6870482|PMID:35022234) UniProt PMID:35022234 MGI:6870482 NCBI chr 6:8,209,111...8,240,573
Ensembl chr 6:8,209,222...8,236,274 		JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of IMP (PMID:25411504) MGI PMID:25411504 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Myrf myelin regulatory factor involved_in IMP (MGI:5437779|PMID:22956843), (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821), (MGI:6258499|PMID:30249802) UniProt PMID:22956843 PMID:24204311 PMID:27532821 PMID:30249802 MGI:5437779 MGI:5544144 MGI:5805298 MGI:6258499 NCBI chr19:10,185,635...10,218,134
Ensembl chr19:10,185,636...10,218,112 		JBrowse link
G Neurod4 neurogenic differentiation 4 acts_upstream_of_or_within IGI (PMID:15976074) MGI PMID:15976074 NCBI chr10:130,104,021...130,116,123
Ensembl chr10:130,104,021...130,116,109 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of IMP (PMID:15944386) MGI PMID:15944386 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:29437824)
(PMID:29106906)		 MGI PMID:29106906 PMID:29437824 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IGI (PMID:11171336), (PMID:11493571) MGI PMID:11171336 PMID:11493571 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of IGI (PMID:11566099) MGI PMID:11566099 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163 		JBrowse link
G Nkx2-2os NK2 homeobox 2, opposite strand acts_upstream_of IDA (PMID:18538132) MGI PMID:18538132 NCBI chr 2:147,026,003...147,173,601
Ensembl chr 2:147,026,003...147,173,601 		JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of
acts_upstream_of_or_within		 IGI (PMID:15629702)
(PMID:15629701)		 MGI PMID:15629701 PMID:15629702 NCBI chr 5:101,807,050...101,812,577
Ensembl chr 5:101,806,005...101,812,862 		JBrowse link
G Nkx6-2 NK6 homeobox 2 acts_upstream_of_or_within IGI (PMID:15629701)
(PMID:15629702)		 MGI PMID:15629701 PMID:15629702 NCBI chr 7:139,159,292...139,162,726
Ensembl chr 7:139,159,292...139,162,713 		JBrowse link
G Nlgn3 neuroligin 3 acts_upstream_of_or_within IMP (PMID:19139271) MGI PMID:19139271 NCBI chr  X:100,342,785...100,364,956
Ensembl chr  X:100,342,774...100,369,569 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within ISO
IMP		 (PMID:12186854) RGD
MGI		 PMID:12186854 PMID:12876431 RGD:1581402 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within IMP (PMID:11756753) MGI PMID:11756753 NCBI chr 8:32,299,493...33,381,858
Ensembl chr 8:32,304,579...33,374,825
Ensembl chr 8:32,304,579...33,374,825 		JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 involved_in IMP (MGI:3776308|PMID:15372074) UniProt PMID:15372074 MGI:3776308 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of
acts_upstream_of_or_within
involved_in		 ISO
IGI
IMP		 (PMID:11566099)
(PMID:16436615)		 RGD
MGI		 PMID:11566099 PMID:16436615 PMID:22173726 GO_REF:0000096 MGI:4417868 RGD:40902844 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IMP (PMID:26166575) MGI PMID:26166575 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Ptpra protein tyrosine phosphatase receptor type A ISO RGD PMID:19812040 RGD:2314625 NCBI chr 2:130,292,198...130,396,220
Ensembl chr 2:130,292,198...130,398,044 		JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J acts_upstream_of_or_within IMP (PMID:19139271) MGI PMID:19139271 NCBI chr 2:90,260,100...90,411,102
Ensembl chr 2:90,260,098...90,410,991 		JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z, polypeptide 1 involved_in IMP
ISO		 (MGI:5295220|PMID:21969550) UniProt
RGD		 PMID:8812065 PMID:21969550 MGI:5295220 RGD:9590122 NCBI chr 6:22,875,302...23,052,915
Ensembl chr 6:22,875,501...23,052,915 		JBrowse link
G Rheb Ras homolog enriched in brain acts_upstream_of IMP (PMID:25411504) MGI PMID:25411504 NCBI chr 5:25,007,821...25,047,359
Ensembl chr 5:25,007,821...25,047,622 		JBrowse link
G Rtn4 reticulon 4 ISO RGD PMID:19236864 RGD:2314931 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:11171336), (PMID:11493571)
(PMID:15880651)		 MGI
GO_Central		 PMID:11171336 PMID:11493571 PMID:15880651 GO_REF:0000033 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Slc8a3 solute carrier family 8 (sodium/calcium exchanger), member 3 involved_in IMP (MGI:5524192|PMID:21959935) UniProt PMID:21959935 MGI:5524192 NCBI chr12:81,244,686...81,380,506
Ensembl chr12:81,244,689...81,379,954 		JBrowse link
G Sox10 SRY (sex determining region Y)-box 10 involved_in
acts_upstream_of_or_within		 IMP (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821)
(PMID:16790476)
(PMID:17084361)		 UniProt
MGI		 PMID:16790476 PMID:17084361 PMID:24204311 PMID:27532821 MGI:5544144 MGI:5805298 NCBI chr15:79,039,113...79,048,690
Ensembl chr15:79,039,108...79,049,440 		JBrowse link
G Sox5 SRY (sex determining region Y)-box 5 acts_upstream_of_or_within IMP (PMID:17084361) MGI PMID:17084361 NCBI chr 6:143,774,151...144,728,008
Ensembl chr 6:143,774,151...144,727,703 		JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 acts_upstream_of_or_within IMP (PMID:17084361) MGI PMID:17084361 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031 		JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 acts_upstream_of_or_within IMP (PMID:17084361) MGI PMID:17084361 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:17084361) GO_Central
MGI		 PMID:17084361 GO_REF:0000033 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Srsf1 serine and arginine-rich splicing factor 1 ISO RGD PMID:16288477 RGD:11038733 NCBI chr11:87,937,325...87,944,583
Ensembl chr11:87,938,199...87,944,581 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within IMP (PMID:28041882) MGI PMID:28041882 NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949 		JBrowse link
G Tppp tubulin polymerization promoting protein involved_in IMP (MGI:6368053|PMID:31522887) UniProt PMID:31522887 MGI:6368053 NCBI chr13:74,157,538...74,183,872
Ensembl chr13:74,157,526...74,183,872 		JBrowse link
G Trpc4 transient receptor potential cation channel, subfamily C, member 4 acts_upstream_of_or_within IMP (PMID:19139271) MGI PMID:19139271 NCBI chr 3:54,063,441...54,225,892
Ensembl chr 3:54,063,456...54,225,892 		JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within IMP (PMID:19139271) MGI PMID:19139271 NCBI chr 3:102,642,086...102,679,626
Ensembl chr 3:102,641,845...102,708,829 		JBrowse link
G Vtn vitronectin involved_in IDA (MGI:5619735|PMID:23155445) CACAO PMID:23155445 MGI:5619735 NCBI chr11:78,389,946...78,393,151
Ensembl chr11:78,389,917...78,393,150 		JBrowse link
orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc5 actin related protein 2/3 complex, subunit 5 ISO RGD PMID:23459330 RGD:11049475 NCBI chr 1:152,642,293...152,651,331
Ensembl chr 1:152,642,293...152,651,348 		JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:22015925 RGD:7248608 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724 		JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:22015925 RGD:7248608 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in IMP (MGI:4452541|PMID:20410112) UniProt PMID:20410112 MGI:4452541 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in IMP (MGI:4452541|PMID:20410112) UniProt PMID:20410112 MGI:4452541 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Reln reelin ISO RGD PMID:20035841 RGD:2317761 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
pallium cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 acts_upstream_of_or_within IMP (PMID:24192035) MGI PMID:24192035 NCBI chr11:95,847,989...95,896,770
Ensembl chr11:95,847,989...95,896,766 		JBrowse link
pallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16613831) MGI PMID:16613831 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:10409502) MGI PMID:10409502 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:11124115) MGI PMID:11124115 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
pituitary gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 ISO RGD PMID:18160680 RGD:2325274 NCBI chr17:93,506,448...93,513,967
Ensembl chr17:93,506,445...93,513,965 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 ISO RGD PMID:17180597 RGD:2306413 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 ISO RGD PMID:17180597 RGD:2306413 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:9806931) MGI PMID:9806931 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (PMID:17359964) MGI PMID:17359964 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Cdh1 cadherin 1 ISO RGD PMID:17373711 RGD:2289637 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within IMP (PMID:16141355) MGI PMID:16141355 NCBI chr 1:64,571,963...64,643,707
Ensembl chr 1:64,571,804...64,643,707 		JBrowse link
G Ets1 E26 avian leukemia oncogene 1, 5' domain ISO RGD PMID:8946059 RGD:2313681 NCBI chr 9:32,547,501...32,669,116
Ensembl chr 9:32,547,517...32,669,116 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:11062007) MGI PMID:11062007 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:16543408) MGI PMID:16543408 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Gli1 GLI-Kruppel family member GLI1 acts_upstream_of_or_within IGI (PMID:10725236) MGI PMID:10725236 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IGI (PMID:10725236) MGI PMID:10725236 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IGI
IMP		 (PMID:17426285)
(PMID:17015435), (PMID:17426285)		 MGI PMID:17015435 PMID:17426285 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hesx1 homeobox gene expressed in ES cells involved_in
acts_upstream_of_or_within		 ISO
IBA
IGI
IMP		 (PMID:18775421)
(PMID:11731482), (PMID:9620767)
(PMID:19093031)
(PMID:20181723)		 MGI
GO_Central		 PMID:9620767 PMID:11731482 PMID:18775421 PMID:19093031 PMID:20181723 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within IMP (PMID:504232) MGI PMID:504232 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374 		JBrowse link
G Inhbb inhibin beta-B ISO RGD PMID:18160680 RGD:2325274 NCBI chr 1:119,343,193...119,349,978
Ensembl chr 1:119,343,195...119,349,978 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain acts_upstream_of_or_within IMP (PMID:9806931) MGI PMID:9806931 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A acts_upstream_of_or_within IMP (PMID:17392792) MGI PMID:17392792 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034 		JBrowse link
G Lhx3 LIM homeobox protein 3 acts_upstream_of_or_within IMP (PMID:18037398) MGI PMID:18037398 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301 		JBrowse link
G Msx1 msh homeobox 1 ISO RGD PMID:16451220 RGD:5132608 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:9806931) MGI PMID:9806931 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:17359964) MGI PMID:17359964 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:10588713) MGI PMID:10588713 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:15208361 RGD:2308902 NCBI chr13:75,237,407...75,282,980
Ensembl chr13:75,237,945...75,282,980 		JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 acts_upstream_of_or_within IMP (PMID:10049363) MGI PMID:10049363 NCBI chr13:55,972,857...55,984,002
Ensembl chr13:55,972,864...55,984,005 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:10498698)
(PMID:10499586)		 MGI PMID:10498698 PMID:10499586 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Pou1f1 POU domain, class 1, transcription factor 1 acts_upstream_of_or_within IMP (PMID:16556738) MGI PMID:16556738 NCBI chr16:65,317,398...65,331,904
Ensembl chr16:65,317,397...65,331,183 		JBrowse link
G Prop1 paired like homeodomain factor 1 acts_upstream_of_or_within IMP (PMID:11731482) MGI PMID:11731482 NCBI chr11:50,841,633...50,844,584
Ensembl chr11:50,841,633...50,844,592 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within IMP (PMID:17015435) MGI PMID:17015435 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in ISO (PMID:12065233) UniProt PMID:12065233 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Six3 sine oculis-related homeobox 3 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:3821506|PMID:18775421)
(PMID:18775421)		 UniProt
MGI		 PMID:18775421 MGI:3821506 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 involved_in ISO (PMID:18285410) UniProt PMID:18285410 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Sox3 SRY (sex determining region Y)-box 3 involved_in IMP (MGI:3033563|PMID:14981518) UniProt PMID:14981518 MGI:3033563 NCBI chr  X:59,934,972...59,937,045
Ensembl chr  X:59,934,972...59,937,036 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr13:69,721,568...69,759,611
Ensembl chr13:69,721,568...69,759,561 		JBrowse link
G Tbx19 T-box 19 acts_upstream_of_or_within IMP (PMID:11447259) MGI PMID:11447259 NCBI chr 1:164,965,403...164,988,342
Ensembl chr 1:164,965,424...164,988,342 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IMP (PMID:17919533) MGI PMID:17919533 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:53,318,749...53,321,658
Ensembl chr11:53,318,749...53,321,658 		JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate receptor, ionotropic, NMDA1 (zeta 1) acts_upstream_of_or_within IMP (PMID:8313466) MGI PMID:8313466 NCBI chr 2:25,181,189...25,209,199
Ensembl chr 2:25,181,193...25,209,199 		JBrowse link
positive regulation of astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1r colony stimulating factor 1 receptor involved_in ISO RGD
MGI		 PMID:33841088 GO_REF:0000096 MGI:4417868 RGD:151665762 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221 		JBrowse link
positive regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 ARP3 actin-related protein 3 involved_in ISO RGD
MGI		 PMID:23843614 GO_REF:0000096 MGI:4417868 RGD:8553949 NCBI chr 1:125,320,642...125,363,464
Ensembl chr 1:125,320,642...125,363,464 		JBrowse link
G Bin1 bridging integrator 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:32,509,671...32,568,793
Ensembl chr18:32,510,283...32,568,790 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IDA
IGI		 (PMID:10486560), (PMID:15882580)
(PMID:15882580)		 MGI PMID:10486560 PMID:15882580 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Clcf1 cardiotrophin-like cytokine factor 1 involved_in IDA (MGI:5009184|PMID:12090754) BHF-UCL PMID:12090754 MGI:5009184 NCBI chr19:4,264,479...4,273,548
Ensembl chr19:4,264,292...4,273,544 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IDA (MGI:2655020|PMID:12666205) UniProt PMID:12666205 MGI:2655020 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within IMP (PMID:19109490) MGI PMID:19109490 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO RGD
MGI		 PMID:22270046 GO_REF:0000096 MGI:4417868 RGD:6482669 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059 		JBrowse link
G Il6st interleukin 6 signal transducer acts_upstream_of_or_within IMP (PMID:10486560) MGI PMID:10486560 NCBI chr13:112,600,604...112,643,394
Ensembl chr13:112,600,604...112,646,620 		JBrowse link
G Lif leukemia inhibitory factor acts_upstream_of_or_within IDA (PMID:10486560) MGI PMID:10486560 NCBI chr11:4,207,587...4,222,514
Ensembl chr11:4,207,557...4,222,514 		JBrowse link
G Mag myelin-associated glycoprotein involved_in ISO RGD
MGI		 PMID:19349915 GO_REF:0000096 MGI:4417868 RGD:9685287 NCBI chr 7:30,598,600...30,614,347
Ensembl chr 7:30,598,601...30,614,298 		JBrowse link
G Notch1 notch 1 involved_in IDA (MGI:2655020|PMID:12666205) UniProt PMID:12666205 MGI:2655020 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO RGD
MGI		 PMID:23769735 GO_REF:0000096 MGI:4417868 RGD:10045891 NCBI chr19:10,872,595...10,886,923
Ensembl chr19:10,872,595...10,886,923 		JBrowse link
G Serpine2 serine (or cysteine) peptidase inhibitor, clade E, member 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:79,772,038...79,836,382
Ensembl chr 1:79,771,914...79,838,897 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:10357934) MGI PMID:10357934 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
positive regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pitx3 paired-like homeodomain transcription factor 3 involved_in ISO RGD
MGI		 PMID:18385323 GO_REF:0000096 MGI:4417868 RGD:11535083 NCBI chr19:46,123,720...46,136,764
Ensembl chr19:46,124,124...46,136,765 		JBrowse link
G Ryk receptor-like tyrosine kinase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:102,712,119...102,785,506
Ensembl chr 9:102,712,116...102,785,504 		JBrowse link
positive regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor acts_upstream_of_or_within IDA (PMID:10027293) MGI PMID:10027293 NCBI chr 3:129,471,223...129,548,971
Ensembl chr 3:129,471,214...129,548,965 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within IDA (PMID:10027293) MGI PMID:10027293 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 acts_upstream_of_or_within IMP (PMID:24062445) MGI PMID:24062445 NCBI chr 1:135,087,988...135,095,419
Ensembl chr 1:135,087,972...135,095,419 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within IDA (PMID:10027293) MGI PMID:10027293 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:10027293) MGI PMID:10027293 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
positive regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prox1 prospero homeobox 1 involved_in IMP (MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:4849596 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
positive regulation of microglia differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor, beta 1 involved_in IMP (MGI:6192878|PMID:29909984) UniProt PMID:29909984 MGI:6192878 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
positive regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IMP (MGI:4948425|PMID:21347250) ParkinsonsUK-UCL PMID:21347250 MGI:4948425 NCBI chr19:30,523,276...30,526,896
Ensembl chr19:30,523,263...30,527,065 		JBrowse link
positive regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspa aspartoacylase involved_in ISO RGD
MGI		 PMID:16634055 GO_REF:0000096 MGI:4417868 RGD:1599295 NCBI chr11:73,195,813...73,217,677
Ensembl chr11:73,195,818...73,220,422 		JBrowse link
G Clcn2 chloride channel, voltage-sensitive 2 involved_in ISO RGD
MGI		 PMID:29344669 GO_REF:0000096 MGI:4417868 RGD:213230158 NCBI chr16:20,521,185...20,536,496
Ensembl chr16:20,521,714...20,536,496 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in IMP (MGI:4458974|PMID:20534485) BHF-UCL PMID:20534485 MGI:4458974 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030 		JBrowse link
G Dag1 dystroglycan 1 involved_in ISO RGD
MGI		 PMID:17395644 GO_REF:0000096 MGI:4417868 RGD:11541054 NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157 		JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in ISO RGD
MGI		 PMID:22139091 GO_REF:0000096 MGI:4417868 RGD:9685417 NCBI chr15:54,702,297...54,816,284
Ensembl chr15:54,702,297...54,816,288 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:23042297) MGI PMID:23042297 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Hdac1 histone deacetylase 1 acts_upstream_of_or_within ISO
IGI		 (PMID:19503085) RGD
MGI		 PMID:19503085 PMID:22573687 RGD:9590148 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within
involved_in		 ISO
IGI		 (PMID:19503085) RGD
MGI		 PMID:19503085 PMID:22573687 GO_REF:0000096 MGI:4417868 RGD:9590148 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Il33 interleukin 33 involved_in ISO RGD
MGI		 PMID:31165473 GO_REF:0000096 MGI:4417868 RGD:40400907 NCBI chr19:29,902,513...29,938,118
Ensembl chr19:29,902,514...29,938,118 		JBrowse link
G Il34 interleukin 34 involved_in IDA (MGI:5805301|PMID:27445335) UniProt PMID:27445335 MGI:5805301 NCBI chr 8:111,467,809...111,532,579
Ensembl chr 8:111,468,461...111,532,556 		JBrowse link
G Mdk midkine involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:91,760,149...91,762,348
Ensembl chr 2:91,760,150...91,762,642 		JBrowse link
G Mir219a-1 microRNA 219a-1 acts_upstream_of_or_within IDA (PMID:20223197) MGI PMID:20223197 NCBI chr17:34,243,957...34,244,066
Ensembl chr17:34,243,957...34,244,066 		JBrowse link
G Mir219a-2 microRNA 219a-2 acts_upstream_of_or_within IDA (PMID:20223197) MGI PMID:20223197 NCBI chr 2:29,735,643...29,735,739
Ensembl chr 2:29,735,643...29,735,739 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within IDA (PMID:24101522) MGI PMID:24101522 NCBI chr 8:84,935,147...84,935,221
Ensembl chr 8:84,935,147...84,935,221 		JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in		 ISO
IMP		 (PMID:25411504) RGD
MGI		 PMID:19439614 PMID:25411504 GO_REF:0000096 MGI:4417868 RGD:10040963 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Myrf myelin regulatory factor involved_in ISO RGD
MGI		 PMID:27370227 GO_REF:0000096 MGI:4417868 RGD:213230157 NCBI chr19:10,185,635...10,218,134
Ensembl chr19:10,185,636...10,218,112 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within IGI (PMID:11566099) MGI PMID:11566099 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163 		JBrowse link
G Nkx2-2os NK2 homeobox 2, opposite strand acts_upstream_of_or_within IDA (PMID:18538132) MGI PMID:18538132 NCBI chr 2:147,026,003...147,173,601
Ensembl chr 2:147,026,003...147,173,601 		JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within IGI (PMID:15629702) MGI PMID:15629702 NCBI chr 5:101,807,050...101,812,577
Ensembl chr 5:101,806,005...101,812,862 		JBrowse link
G Nkx6-2 NK6 homeobox 2 acts_upstream_of_or_within IGI (PMID:15629702) MGI PMID:15629702 NCBI chr 7:139,159,292...139,162,726
Ensembl chr 7:139,159,292...139,162,713 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IGI (PMID:11566099) MGI PMID:11566099 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO RGD
MGI		 PMID:18543250 GO_REF:0000096 MGI:4417868 RGD:2301878 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360 		JBrowse link
G Prmt5 protein arginine N-methyltransferase 5 involved_in ISO RGD
MGI		 PMID:22041901 GO_REF:0000096 MGI:4417868 RGD:9491827 NCBI chr14:54,744,639...54,754,927
Ensembl chr14:54,744,644...54,754,982 		JBrowse link
G Ptn pleiotrophin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Ptpra protein tyrosine phosphatase receptor type A involved_in ISO RGD
MGI		 PMID:19812040 GO_REF:0000096 MGI:4417868 RGD:2314625 NCBI chr 2:130,292,198...130,396,220
Ensembl chr 2:130,292,198...130,398,044 		JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z, polypeptide 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:22,875,302...23,052,915
Ensembl chr 6:22,875,501...23,052,915 		JBrowse link
G Qki quaking, KH domain containing RNA binding involved_in ISO
IDA		 (MGI:4839851|PMID:20956316), (MGI:4950003|PMID:21253564), (MGI:5903342|PMID:28188285) RGD
UniProt
MGI		 PMID:17575274 PMID:20956316 PMID:21253564 PMID:28188285 GO_REF:0000096 MGI:4417868 MGI:4839851 MGI:4950003 MGI:5903342 RGD:10045992 NCBI chr17:10,425,480...10,538,706
Ensembl chr17:10,421,530...10,538,783 		JBrowse link
G Rheb Ras homolog enriched in brain acts_upstream_of_or_within IMP (PMID:25411504) MGI PMID:25411504 NCBI chr 5:25,007,821...25,047,359
Ensembl chr 5:25,007,821...25,047,622 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:11171336) MGI PMID:11171336 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in IMP (MGI:5437806|PMID:22915103) UniProt PMID:22915103 MGI:5437806 NCBI chr 7:95,550,262...96,560,300
Ensembl chr 7:95,820,453...96,560,300 		JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO RGD
MGI		 PMID:21971760 GO_REF:0000096 MGI:4417868 RGD:7241097 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074 		JBrowse link
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b involved_in IMP
IBA		 (MGI:5775216|PMID:27147664) ARUK-UCL
GO_Central		 PMID:27147664 GO_REF:0000033 MGI:5775216 NCBI chr 4:144,938,938...144,973,453
Ensembl chr 4:144,940,033...144,973,440 		JBrowse link
G Trp73 transformation related protein 73 involved_in ISO RGD
MGI		 PMID:14960496 GO_REF:0000096 MGI:4417868 RGD:2291843 NCBI chr 4:154,140,706...154,224,332
Ensembl chr 4:154,140,706...154,224,665 		JBrowse link
G Zfp365 zinc finger protein 365 involved_in IMP
ISO		 (MGI:5558972|PMID:24481677) UniProt
MGI		 PMID:24481677 GO_REF:0000096 MGI:4417868 MGI:5558972 NCBI chr10:67,721,935...67,748,492
Ensembl chr10:67,721,933...67,748,492 		JBrowse link
G Zfp488 zinc finger protein 488 involved_in
acts_upstream_of_or_within		 IDA
IGI		 (MGI:6189284|PMID:22355521)
(PMID:16908628)		 UniProt
MGI		 PMID:16908628 PMID:22355521 MGI:6189284 NCBI chr14:33,689,023...33,700,986
Ensembl chr14:33,689,027...33,700,721 		JBrowse link
postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
principal sensory nucleus of trigeminal nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kirrel3 kirre like nephrin family adhesion molecule 3 acts_upstream_of_or_within IMP (PMID:21241806) MGI PMID:21241806 NCBI chr 9:34,396,850...34,952,103
Ensembl chr 9:34,397,190...34,948,012 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP (PMID:16956587)
(PMID:16819976)		 MGI PMID:16819976 PMID:16956587 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Nfib nuclear factor I/B involved_in IMP (MGI:5284754|PMID:19107796) UniProt PMID:19107796 MGI:5284754 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987 		JBrowse link
prolactin secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx3 LIM homeobox protein 3 acts_upstream_of_or_within IMP (PMID:8638120) MGI PMID:8638120 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301 		JBrowse link
putamen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976 		JBrowse link
pyramidal neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 acts_upstream_of_or_within IMP (PMID:16625205) MGI PMID:16625205 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575 		JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP (PMID:2473662) MGI PMID:2473662 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Dclk2 doublecortin-like kinase 2 acts_upstream_of_or_within IGI (PMID:19342486) MGI PMID:19342486 NCBI chr 3:86,693,457...86,828,292
Ensembl chr 3:86,693,458...86,828,159 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IGI (PMID:19342486) MGI PMID:19342486 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in IMP (MGI:4452541|PMID:20410112) UniProt PMID:20410112 MGI:4452541 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within IMP (PMID:11683995) MGI PMID:11683995 NCBI chr  X:73,372,644...73,388,295
Ensembl chr  X:73,372,672...73,388,295 		JBrowse link
G Scyl2 SCY1-like 2 (S. cerevisiae) involved_in IMP (MGI:5694521|PMID:26203146) UniProt PMID:26203146 MGI:5694521 NCBI chr10:89,474,582...89,522,179
Ensembl chr10:89,474,583...89,522,147 		JBrowse link
G Slc4a10 solute carrier family 4, sodium bicarbonate cotransporter-like, member 10 acts_upstream_of_or_within IMP (PMID:18165320) MGI PMID:18165320 NCBI chr 2:61,876,815...62,157,087
Ensembl chr 2:61,876,806...62,157,074 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:53,318,749...53,321,658
Ensembl chr11:53,318,749...53,321,658 		JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 disrupted in schizophrenia 1 involved_in ISO RGD
MGI		 PMID:16299498 GO_REF:0000096 MGI:4417868 RGD:5509783 NCBI chr 8:125,773,928...125,991,882
Ensembl chr 8:125,780,934...125,988,597 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IDA (PMID:22726835) MGI PMID:22726835 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:25,458,299...25,667,167
Ensembl chr14:25,459,609...25,667,167 		JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:20153830) MGI
GO_Central		 PMID:20153830 GO_REF:0000033 NCBI chr 7:141,006,359...141,009,475
Ensembl chr 7:141,006,359...141,009,404 		JBrowse link
G Ulk1 unc-51 like kinase 1 acts_upstream_of_or_within IMP (PMID:10624947) MGI PMID:10624947 NCBI chr 5:110,932,355...110,957,991
Ensembl chr 5:110,932,354...110,957,963 		JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna2 catenin alpha 2 involved_in IMP (MGI:2181860|PMID:12089526), (MGI:3621696|PMID:12123610) UniProt PMID:12089526 PMID:12123610 MGI:2181860 MGI:3621696 NCBI chr 6:76,858,620...77,956,798
Ensembl chr 6:76,858,620...77,956,682 		JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within IMP (PMID:24210661) MGI PMID:24210661 NCBI chr 9:53,525,881...53,578,807
Ensembl chr 9:53,525,882...53,581,314 		JBrowse link
G Dab1 disabled 1 acts_upstream_of_or_within IMP
IGI		 (PMID:9338785)
(PMID:24210661)		 MGI PMID:9338785 PMID:24210661 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Rbfox2 RNA binding protein, fox-1 homolog (C. elegans) 2 acts_upstream_of_or_within IMP (PMID:22357600) MGI PMID:22357600 NCBI chr15:76,963,190...77,193,058
Ensembl chr15:76,963,190...77,191,204 		JBrowse link
G Rere arginine glutamic acid dipeptide (RE) repeats acts_upstream_of_or_within IMP (PMID:24466353) MGI PMID:24466353 NCBI chr 4:150,365,372...150,706,423
Ensembl chr 4:150,366,103...150,706,423 		JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within IGI
IMP		 (PMID:24210661) MGI PMID:24210661 NCBI chr 9:96,352,990...96,360,728
Ensembl chr 9:96,352,990...96,360,728 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within IMP (PMID:24210661) MGI PMID:24210661 NCBI chr11:97,253,044...97,289,368
Ensembl chr11:97,253,261...97,289,368 		JBrowse link
regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntn2 contactin 2 acts_upstream_of_or_within IMP (PMID:18650339) MGI PMID:18650339 NCBI chr 1:132,437,163...132,470,989
Ensembl chr 1:132,437,165...132,470,994 		JBrowse link
G Epha4 Eph receptor A4 involved_in IMP (MGI:3530975|PMID:15537875) UniProt PMID:15537875 MGI:3530975 NCBI chr 1:77,343,819...77,491,763
Ensembl chr 1:77,343,822...77,491,725 		JBrowse link
G Qki quaking, KH domain containing RNA binding involved_in IMP (MGI:6515246|PMID:33750804) UniProt PMID:33750804 MGI:6515246 NCBI chr17:10,425,480...10,538,706
Ensembl chr17:10,421,530...10,538,783 		JBrowse link
regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within IC
IMP		 (MGI:5300220|PMID:21937600)
(PMID:21937600)		 GOC
MGI		 PMID:21937600 MGI:5300220 NCBI chr18:76,934,428...76,988,759
Ensembl chr18:76,944,100...76,988,037 		JBrowse link
regulation of establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgra2 adhesion G protein-coupled receptor A2 involved_in
acts_upstream_of_or_within		 IMP (MGI:6102983|PMID:28288111)
(PMID:21421844)		 UniProt
MGI		 PMID:21421844 PMID:28288111 MGI:6102983 NCBI chr 8:27,575,546...27,613,464
Ensembl chr 8:27,575,611...27,613,464 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in IMP (MGI:6114565|PMID:28803732) UniProt PMID:28803732 MGI:6114565 NCBI chr 4:43,875,521...43,944,806
Ensembl chr 4:43,875,530...43,944,806 		JBrowse link
regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:22991444) MGI PMID:22991444 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in IGI (MGI:5448935|PMID:22290867) ParkinsonsUK-UCL PMID:22290867 MGI:5448935 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in IGI (MGI:5448935|PMID:22290867) ParkinsonsUK-UCL PMID:22290867 MGI:5448935 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:20223197) MGI PMID:20223197 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dusp15 dual specificity phosphatase-like 15 involved_in IMP (MGI:5897548|PMID:22792334) UniProt PMID:22792334 MGI:5897548 NCBI chr 2:152,782,915...152,794,200
Ensembl chr 2:152,782,917...152,793,618 		JBrowse link
G Opalin oligodendrocytic myelin paranodal and inner loop protein involved_in IMP (MGI:6307357|PMID:30837646) UniProt PMID:30837646 MGI:6307357 NCBI chr19:41,050,398...41,065,552
Ensembl chr19:41,050,149...41,065,552 		JBrowse link
G Slc45a3 solute carrier family 45, member 3 involved_in IMP (MGI:5464987|PMID:22521588) ParkinsonsUK-UCL PMID:22521588 MGI:5464987 NCBI chr 1:131,890,653...131,910,710
Ensembl chr 1:131,890,705...131,910,707 		JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 involved_in IMP (MGI:4414895|PMID:19723505) UniProt PMID:19723505 MGI:4414895 NCBI chr 8:12,445,519...12,449,555
Ensembl chr 8:12,445,295...12,450,126 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IMP (PMID:19503085) MGI PMID:19503085 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
G Tnfrsf21 tumor necrosis factor receptor superfamily, member 21 involved_in IMP (MGI:5545972|PMID:21725297) UniProt PMID:21725297 MGI:5545972 NCBI chr17:43,327,446...43,400,079
Ensembl chr17:43,327,446...43,400,080 		JBrowse link
G Wdr1 WD repeat domain 1 acts_upstream_of_or_within ISO (PMID:20631256) MGI PMID:20631256 NCBI chr 5:38,684,149...38,720,265
Ensembl chr 5:38,684,156...38,720,564 		JBrowse link
regulation of timing of subpallium neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:9876181) MGI PMID:9876181 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
retrotrapezoid nucleus neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b involved_in IMP (MGI:4418003|PMID:19940179) BHF-UCL PMID:19940179 MGI:4418003 NCBI chr 5:67,251,751...67,256,399
Ensembl chr 5:67,251,742...67,256,644 		JBrowse link
rhombomere 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:16651541) MGI PMID:16651541 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP (PMID:7508007) MGI PMID:7508007 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
rhombomere 3 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within IGI (PMID:9806922) MGI PMID:9806922 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within IGI
IMP		 (PMID:9806922) MGI PMID:9806922 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IGI (PMID:7508007) MGI PMID:7508007 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within IGI (PMID:10230789) MGI PMID:10230789 NCBI chr11:96,242,458...96,244,846
Ensembl chr11:96,241,351...96,244,838 		JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within IMP (PMID:7903221) MGI PMID:7903221 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018 		JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP (PMID:10230789) MGI PMID:10230789 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in IDA (MGI:52248|PMID:8093858) UniProt PMID:8093858 MGI:52248 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018 		JBrowse link
rhombomere 4 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 acts_upstream_of_or_within IGI
IMP		 (PMID:10529420)
(PMID:8102800), (PMID:9806922)		 MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Hoxb1 homeobox B1 acts_upstream_of_or_within IGI (PMID:10529420) MGI PMID:10529420 NCBI chr11:96,256,547...96,259,082
Ensembl chr11:96,256,578...96,259,082 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within IGI (PMID:10230789) MGI PMID:10230789 NCBI chr11:96,242,458...96,244,846
Ensembl chr11:96,241,351...96,244,838 		JBrowse link
rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 acts_upstream_of_or_within IGI
IMP		 (PMID:10529420)
(PMID:8102800), (PMID:9806922)		 MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Hoxb1 homeobox B1 acts_upstream_of_or_within IGI (PMID:10529420) MGI PMID:10529420 NCBI chr11:96,256,547...96,259,082
Ensembl chr11:96,256,578...96,259,082 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within IMP (PMID:7925021) MGI PMID:7925021 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985 		JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within IMP (PMID:7903221) MGI PMID:7903221 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018 		JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in IDA
IMP		 (MGI:52248|PMID:8093858)
(MGI:6393337|PMID:11823429)		 UniProt PMID:8093858 PMID:11823429 MGI:52248 MGI:6393337 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018 		JBrowse link
rhombomere 6 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within IMP (PMID:7925021) MGI PMID:7925021 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985 		JBrowse link
rhombomere development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb1 homeobox B1 acts_upstream_of_or_within IDA (PMID:21320481) MGI PMID:21320481 NCBI chr11:96,256,547...96,259,082
Ensembl chr11:96,256,578...96,259,082 		JBrowse link
G Hoxb3 homeobox B3 acts_upstream_of_or_within IDA (PMID:21320481) MGI PMID:21320481 NCBI chr11:96,197,927...96,238,756
Ensembl chr11:96,214,152...96,238,756 		JBrowse link
rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 involved_in ISO RGD
MGI		 PMID:21501682 GO_REF:0000096 MGI:4417868 RGD:8552349 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IGI (PMID:15215207) MGI PMID:15215207 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:15215207) MGI PMID:15215207 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IMP (PMID:19684112) MGI PMID:19684112 NCBI chr19:46,385,335...46,477,243
Ensembl chr19:46,385,335...46,477,243 		JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IGI (PMID:15215207) MGI PMID:15215207 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:15215207) MGI PMID:15215207 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IMP (PMID:19684112) MGI PMID:19684112 NCBI chr19:46,385,335...46,477,243
Ensembl chr19:46,385,335...46,477,243 		JBrowse link
somatic motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within IMP (PMID:21052544) MGI PMID:21052544 NCBI chr 8:14,931,335...14,951,720
Ensembl chr 8:14,931,335...14,951,720 		JBrowse link
G Phox2a paired-like homeobox 2a acts_upstream_of_or_within IMP (PMID:16319924) MGI PMID:16319924 NCBI chr 7:101,467,520...101,471,933
Ensembl chr 7:101,467,520...101,471,933 		JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within IMP (PMID:16357211) MGI PMID:16357211 NCBI chr 5:122,377,558...122,402,557
Ensembl chr 5:122,375,911...122,402,523 		JBrowse link
somatotropin secreting cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within IMP (PMID:6116352), (PMID:6194978) MGI PMID:6116352 PMID:6194978 NCBI chr 6:55,353,204...55,365,515
Ensembl chr 6:55,353,280...55,365,515 		JBrowse link
G Pou1f1 POU domain, class 1, transcription factor 1 acts_upstream_of_or_within IMP (PMID:17015435) MGI PMID:17015435 NCBI chr16:65,317,398...65,331,904
Ensembl chr16:65,317,397...65,331,183 		JBrowse link
somatotropin secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx3 LIM homeobox protein 3 acts_upstream_of_or_within IMP (PMID:8638120) MGI PMID:8638120 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301 		JBrowse link
G Pou1f1 POU domain, class 1, transcription factor 1 acts_upstream_of_or_within IMP (PMID:1334535), (PMID:6194978) MGI PMID:1334535 PMID:6194978 NCBI chr16:65,317,398...65,331,904
Ensembl chr16:65,317,397...65,331,183 		JBrowse link
G Prop1 paired like homeodomain factor 1 acts_upstream_of_or_within IMP (PMID:6194978) MGI PMID:6194978 NCBI chr11:50,841,633...50,844,584
Ensembl chr11:50,841,633...50,844,592 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IMP (PMID:18351662) MGI PMID:18351662 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
spinal cord anterior/posterior patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within IMP (PMID:16790475) MGI PMID:16790475 NCBI chr10:128,716,393...128,727,587
Ensembl chr10:128,718,164...128,727,587 		JBrowse link
spinal cord association neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:16715081) MGI PMID:16715081 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within IMP (PMID:10693795) MGI PMID:10693795 NCBI chr12:8,347,918...8,351,954
Ensembl chr12:8,347,918...8,351,954 		JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within IGI (PMID:16715081) MGI PMID:16715081 NCBI chr 5:147,125,492...147,127,753
Ensembl chr 5:147,125,506...147,127,757 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IGI (PMID:16715081) MGI PMID:16715081 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IGI (MGI:3695495|PMID:17166926) UniProt PMID:17166926 MGI:3695495 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lhx3 LIM homeobox protein 3 acts_upstream_of_or_within IDA (PMID:19323994) MGI PMID:19323994 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301 		JBrowse link
G Lhx5 LIM homeobox protein 5 involved_in IGI (MGI:3695495|PMID:17166926) UniProt PMID:17166926 MGI:3695495 NCBI chr 5:120,569,951...120,579,522
Ensembl chr 5:120,569,764...120,579,288 		JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within IGI (PMID:19323994) MGI PMID:19323994 NCBI chr 3:143,894,291...143,911,016
Ensembl chr 3:143,894,291...143,910,981 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr17:30,046,930...30,107,557
Ensembl chr17:30,046,923...30,189,061 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within IGI (PMID:9858722) MGI PMID:9858722 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within IGI (PMID:9858722) MGI PMID:9858722 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839 		JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 acts_upstream_of_or_within IGI (PMID:19323994) MGI PMID:19323994 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IGI (PMID:11877374) MGI PMID:11877374 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IGI
IDA		 (PMID:11877374) MGI PMID:11877374 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan ISO RGD PMID:18364019 RGD:2315810 NCBI chr 7:78,702,974...78,764,847
Ensembl chr 7:78,703,231...78,764,847 		JBrowse link
G Actl6a actin-like 6A ISO RGD PMID:23677776 RGD:9587760 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122 		JBrowse link
G Actl6b actin-like 6B ISO RGD PMID:23677776 RGD:9587760 NCBI chr 5:137,551,784...137,567,844
Ensembl chr 5:137,551,779...137,567,844 		JBrowse link
G Ahi1 Abelson helper integration site 1 ISO RGD PMID:19819228 RGD:11537397 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Akap5 A kinase anchor protein 5 ISO RGD PMID:19535604 RGD:2313144 NCBI chr12:76,371,652...76,380,925
Ensembl chr12:76,371,665...76,380,927 		JBrowse link
G Akt1 thymoma viral proto-oncogene 1 involved_in ISO RGD
MGI		 PMID:23681769 GO_REF:0000096 MGI:4417868 RGD:10040966 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Bag3 BCL2-associated athanogene 3 ISO RGD PMID:19415333 RGD:2325845 NCBI chr 7:128,125,307...128,148,705
Ensembl chr 7:128,125,340...128,148,705 		JBrowse link
G Dcx doublecortin ISO RGD PMID:25487013 RGD:12904756 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:3848562|PMID:19389377) UniProt PMID:19389377 MGI:3848562 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 ISO RGD PMID:8946055 RGD:2316253 NCBI chr14:67,040,313...67,148,490
Ensembl chr14:67,040,313...67,148,410 		JBrowse link
G Eed embryonic ectoderm development ISO RGD PMID:20515739 RGD:9491842 NCBI chr 7:89,603,862...89,630,184
Ensembl chr 7:89,603,862...89,630,191 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:21935678), (PMID:23717624), (PMID:31666661) MGI PMID:21935678 PMID:23717624 PMID:31666661 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 acts_upstream_of_or_within IMP (PMID:17020410) MGI PMID:17020410 NCBI chr 7:19,115,942...19,129,619
Ensembl chr 7:19,115,935...19,129,619 		JBrowse link
G Foxb1 forkhead box B1 involved_in IEP (MGI:1931655|PMID:11170346) UniProt PMID:11170346 MGI:1931655 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IMP (PMID:19877275) MGI PMID:19877275 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Glra2 glycine receptor, alpha 2 subunit ISO RGD PMID:12124753 RGD:708602 NCBI chr  X:163,912,013...164,110,863
Ensembl chr  X:163,912,013...164,110,389 		JBrowse link
G Gria1 glutamate receptor, ionotropic, AMPA1 (alpha 1) ISO RGD PMID:19446017 RGD:2325980 NCBI chr11:56,902,342...57,221,070
Ensembl chr11:56,902,213...57,221,070 		JBrowse link
G Grin2a glutamate receptor, ionotropic, NMDA2A (epsilon 1) ISO RGD PMID:19446017 RGD:2325980 NCBI chr16:9,385,765...9,813,744
Ensembl chr16:9,385,762...9,813,424 		JBrowse link
G Kcnh2 potassium voltage-gated channel, subfamily H (eag-related), member 2 ISO RGD PMID:15365256 RGD:7243961 NCBI chr 5:24,524,583...24,556,671
Ensembl chr 5:24,524,587...24,556,602 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IEP (MGI:5050079|PMID:7909549) UniProt PMID:7909549 MGI:5050079 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in IMP (MGI:5697239|PMID:26307084) UniProt PMID:26307084 MGI:5697239 NCBI chr 6:83,011,186...83,029,547
Ensembl chr 6:83,011,154...83,029,543 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO cervical spinal cord RGD PMID:12605461 RGD:12790706 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within IMP (PMID:20589884) MGI PMID:20589884 NCBI chr  X:100,317,697...100,342,540
Ensembl chr  X:100,317,636...100,341,071 		JBrowse link
G Mpst mercaptopyruvate sulfurtransferase ISO RGD PMID:9078435 RGD:9686095 NCBI chr15:78,290,918...78,298,213
Ensembl chr15:78,290,616...78,298,213 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO RGD
MGI		 PMID:23681769 GO_REF:0000096 MGI:4417868 RGD:10040966 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Nefh neurofilament, heavy polypeptide ISO RGD PMID:2108255 RGD:9698442 NCBI chr11:4,888,754...4,898,064
Ensembl chr11:4,888,754...4,898,064 		JBrowse link
G Nefl neurofilament, light polypeptide ISO RGD PMID:2108255 RGD:9698442 NCBI chr14:68,321,312...68,326,544
Ensembl chr14:68,321,312...68,326,544 		JBrowse link
G Nefm neurofilament, medium polypeptide ISO RGD PMID:2108255 RGD:9698442 NCBI chr14:68,356,994...68,362,453
Ensembl chr14:68,320,039...68,362,295 		JBrowse link
G Neurog3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr10:61,968,869...61,970,542
Ensembl chr10:61,968,869...61,970,542 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:16906226) MGI PMID:16906226 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:17353270) MGI PMID:17353270 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:16712836) MGI PMID:16712836 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Nova1 NOVA alternative splicing regulator 1 ISO RGD PMID:12124753 RGD:708602 NCBI chr12:46,744,678...46,866,143
Ensembl chr12:46,741,300...46,865,712 		JBrowse link
G Npff neuropeptide FF-amide peptide precursor ISO RGD PMID:12619141 RGD:1299340 NCBI chr15:102,432,274...102,433,056
Ensembl chr15:102,432,274...102,433,377 		JBrowse link
G Pax6 paired box 6 ISO RGD PMID:20195794 RGD:2325285 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Phgdh 3-phosphoglycerate dehydrogenase acts_upstream_of_or_within IMP (PMID:19114063) MGI PMID:19114063 NCBI chr 3:98,220,487...98,247,285
Ensembl chr 3:98,220,486...98,247,306 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Plxdc1 plexin domain containing 1 ISO RGD PMID:20411127 RGD:2325872 NCBI chr11:97,814,063...97,879,393
Ensembl chr11:97,814,064...97,877,270 		JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 ISO RGD PMID:12124753 RGD:708602 NCBI chr 3:119,512,390...119,578,296
Ensembl chr 3:119,512,391...119,578,115 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:8453763 RGD:9831456 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IMP (PMID:15842738) MGI PMID:15842738 NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor (GEF) 3 ISO RGD PMID:18583150 RGD:9835386 NCBI chr15:97,637,886...97,666,300
Ensembl chr15:97,642,651...97,665,853 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor (GEF) 4 ISO RGD PMID:18583150 RGD:9835386 NCBI chr 2:71,811,559...72,087,818
Ensembl chr 2:71,811,584...72,087,818 		JBrowse link
G Rnf2 ring finger protein 2 ISO RGD PMID:20515739 RGD:9491842 NCBI chr 1:151,345,159...151,376,562
Ensembl chr 1:151,333,755...151,376,706 		JBrowse link
G Robo1 roundabout guidance receptor 1 ISO RGD PMID:10102268 RGD:68763 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Robo2 roundabout guidance receptor 2 ISO RGD PMID:10102268 RGD:68763 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,889,765 		JBrowse link
G Slit1 slit guidance ligand 1 ISO RGD PMID:10102268 RGD:68763 NCBI chr19:41,586,263...41,735,714
Ensembl chr19:41,588,696...41,732,104 		JBrowse link
G Slit2 slit guidance ligand 2 ISO RGD PMID:10102268 RGD:68763 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
G Slit3 slit guidance ligand 3 ISO RGD PMID:10102268 RGD:68763 NCBI chr11:35,012,283...35,599,334
Ensembl chr11:35,012,051...35,599,334 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:4838379|PMID:20646169) UniProt PMID:20646169 MGI:4838379 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Sox12 SRY (sex determining region Y)-box 12 involved_in IDA (MGI:3803393|PMID:18505825) UniProt PMID:18505825 MGI:3803393 NCBI chr 2:152,235,531...152,239,966
Ensembl chr 2:152,235,531...152,239,983 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:4838379|PMID:20646169) UniProt PMID:20646169 MGI:4838379 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr13:69,721,568...69,759,611
Ensembl chr13:69,721,568...69,759,561 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit ISO RGD PMID:20515739 RGD:9491842 NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949 		JBrowse link
G Vit vitrin involved_in IMP (MGI:5812764|PMID:25331329) UniProt PMID:25331329 MGI:5812764 NCBI chr17:78,815,480...78,934,838
Ensembl chr17:78,815,493...78,934,837 		JBrowse link
G Zic1 zinc finger protein of the cerebellum 1 involved_in IMP (MGI:2178698|PMID:11944941) UniProt PMID:11944941 MGI:2178698 NCBI chr 9:91,240,111...91,250,136
Ensembl chr 9:91,240,111...91,247,863 		JBrowse link
G Zpr1 ZPR1 zinc finger involved_in IMP (MGI:5424069|PMID:22422766) UniProt PMID:22422766 MGI:5424069 NCBI chr 9:46,184,362...46,193,941
Ensembl chr 9:46,184,362...46,193,941 		JBrowse link
spinal cord dorsal/ventral patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IMP (PMID:21761479) MGI PMID:21761479 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IGI
IMP		 (PMID:16364285)
(PMID:15215207)
(PMID:11748151)		 MGI PMID:11748151 PMID:15215207 PMID:16364285 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:16364285)
(PMID:15215207)		 MGI PMID:15215207 PMID:16364285 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:21761479) MGI PMID:21761479 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Intu inturned planar cell polarity protein acts_upstream_of_or_within IMP (PMID:21761479) MGI PMID:21761479 NCBI chr 3:40,585,559...40,659,206
Ensembl chr 3:40,585,435...40,659,204 		JBrowse link
G Rab23 RAB23, member RAS oncogene family acts_upstream_of_or_within IGI
IMP		 (PMID:16364285)
(PMID:15755804), (PMID:16364285)
(PMID:14603322)		 MGI PMID:14603322 PMID:15755804 PMID:16364285 NCBI chr 1:33,758,991...33,781,642
Ensembl chr 1:33,758,968...33,781,645 		JBrowse link
G Rfx4 regulatory factor X, 4 (influences HLA class II expression) acts_upstream_of_or_within IC (MGI:5430880|PMID:19887680) GOC PMID:19887680 MGI:5430880 NCBI chr10:84,591,895...84,742,402
Ensembl chr10:84,591,926...84,742,402 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within ISO
IMP		 (PMID:11748151) MGI PMID:11748151 GO_REF:0000008 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IMP (PMID:16459298) MGI PMID:16459298 NCBI chr19:46,385,335...46,477,243
Ensembl chr19:46,385,335...46,477,243 		JBrowse link
spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxc10 homeobox C10 acts_upstream_of_or_within IGI (PMID:18065432) MGI PMID:18065432 NCBI chr15:102,875,231...102,880,333
Ensembl chr15:102,875,231...102,880,328 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (PMID:18065432) MGI PMID:18065432 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain acts_upstream_of_or_within IGI (PMID:19666821) MGI PMID:19666821 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Isl2 insulin related protein 2 (islet 2) acts_upstream_of_or_within IGI (PMID:19666821) MGI PMID:19666821 NCBI chr 9:55,445,961...55,454,951
Ensembl chr 9:55,445,956...55,453,464 		JBrowse link
G Lhx3 LIM homeobox protein 3 acts_upstream_of_or_within IGI (PMID:19666821) MGI PMID:19666821 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301 		JBrowse link
G Lmo4 LIM domain only 4 involved_in IMP (MGI:7339313|PMID:18539116) UniProt PMID:18539116 MGI:7339313 NCBI chr 3:143,894,291...143,911,016
Ensembl chr 3:143,894,291...143,910,981 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 involved_in
acts_upstream_of_or_within		 IMP
IBA		 (MGI:7339313|PMID:18539116)
(PMID:10482234)		 UniProt
MGI
GO_Central		 PMID:10482234 PMID:18539116 GO_REF:0000033 MGI:7339313 NCBI chr 5:29,678,821...29,683,468
Ensembl chr 5:29,678,032...29,683,468 		JBrowse link
G Olig3 oligodendrocyte transcription factor 3 acts_upstream_of_or_within IMP (PMID:15769945) MGI PMID:15769945 NCBI chr10:19,232,287...19,234,352
Ensembl chr10:19,232,281...19,234,352 		JBrowse link
spinal cord motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abt1 activator of basal transcription 1 acts_upstream_of_or_within IGI (PMID:19299493) MGI PMID:19299493 NCBI chr13:23,602,531...23,608,036
Ensembl chr13:23,602,531...23,608,036 		JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit acts_upstream_of_or_within IMP (PMID:17156092) MGI PMID:17156092 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within IMP (PMID:2061715) MGI PMID:2061715 NCBI chr 8:14,931,335...14,951,720
Ensembl chr 8:14,931,335...14,951,720 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:21338882) MGI PMID:21338882 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IGI (PMID:21552265) MGI PMID:21552265 NCBI chr 9:6,928,550...7,177,619
Ensembl chr 9:6,928,503...7,184,446 		JBrowse link
G Gbx1 gastrulation brain homeobox 1 acts_upstream_of_or_within IMP (PMID:23418536) MGI PMID:23418536 NCBI chr 5:24,709,424...24,731,846
Ensembl chr 5:24,707,755...24,732,200 		JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within IMP (PMID:21943603) MGI PMID:21943603 NCBI chr 7:99,027,976...99,111,082
Ensembl chr 7:99,030,621...99,111,084 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within IMP (PMID:19744960) MGI PMID:19744960 NCBI chr 1:87,254,653...87,378,532
Ensembl chr 1:87,254,720...87,378,518 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:21552265) MGI PMID:21552265 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:21552265) MGI PMID:21552265 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:21552265) MGI PMID:21552265 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 acts_upstream_of_or_within IMP (PMID:19299493) MGI PMID:19299493 NCBI chr19:3,309,076...3,333,011
Ensembl chr19:3,309,076...3,333,017 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain acts_upstream_of_or_within IMP (PMID:8565076) MGI PMID:8565076 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within IGI (PMID:15769945) MGI PMID:15769945 NCBI chr19:45,221,123...45,225,280
Ensembl chr19:45,221,123...45,224,251 		JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within IDA (PMID:19666821) MGI PMID:19666821 NCBI chr 3:143,894,291...143,911,016
Ensembl chr 3:143,894,291...143,910,981 		JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr12:66,512,832...67,269,323
Ensembl chr12:66,512,834...67,269,323 		JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within IGI
IMP		 (PMID:21338882) MGI PMID:21338882 NCBI chr14:115,281,103...115,281,186
Ensembl chr14:115,281,103...115,281,186 		JBrowse link
G Mir18 microRNA 18 acts_upstream_of_or_within IGI (PMID:21338882) MGI PMID:21338882 NCBI chr14:115,281,283...115,281,378
Ensembl chr14:115,281,283...115,281,378 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within IGI (PMID:21338882) MGI PMID:21338882 NCBI chr14:115,281,432...115,281,513
Ensembl chr14:115,281,432...115,281,513 		JBrowse link
G Mir19b-1 microRNA 19b-1 acts_upstream_of_or_within IGI (PMID:21741442) MGI PMID:21741442 NCBI chr14:115,281,737...115,281,823
Ensembl chr14:115,281,737...115,281,823 		JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within IGI (PMID:21338882) MGI PMID:21338882 NCBI chr14:115,281,589...115,281,695
Ensembl chr14:115,281,589...115,281,695 		JBrowse link
G Mir92-1 microRNA 92-1 acts_upstream_of_or_within IGI (PMID:21338882) MGI PMID:21338882 NCBI chr14:115,281,859...115,281,938
Ensembl chr14:115,281,859...115,281,938 		JBrowse link
G Nfe2l1 nuclear factor, erythroid derived 2,-like 1 acts_upstream_of_or_within IMP (PMID:21554501) MGI PMID:21554501 NCBI chr11:96,708,239...96,720,810
Ensembl chr11:96,708,240...96,720,794 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within IMP (PMID:10217145) MGI PMID:10217145 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IMP (PMID:21338882) MGI PMID:21338882 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565 		JBrowse link
G Olig3 oligodendrocyte transcription factor 3 acts_upstream_of_or_within IMP
IGI		 (PMID:15769945)
(PMID:15674731)		 MGI PMID:15674731 PMID:15769945 NCBI chr10:19,232,287...19,234,352
Ensembl chr10:19,232,281...19,234,352 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IGI (PMID:21552265) MGI PMID:21552265 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Scyl1 SCY1-like 1 (S. cerevisiae) acts_upstream_of_or_within IGI
IMP		 (PMID:29437892) MGI PMID:29437892 NCBI chr19:5,808,450...5,821,461
Ensembl chr19:5,808,379...5,821,447 		JBrowse link
G Scyl3 SCY1-like 3 (S. cerevisiae) acts_upstream_of_or_within IGI (PMID:29437892) MGI PMID:29437892 NCBI chr 1:163,756,669...163,782,695
Ensembl chr 1:163,756,669...163,782,695 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IGI (PMID:21552265) MGI PMID:21552265 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
spinal cord oligodendrocyte cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IGI (PMID:18287202) MGI PMID:18287202 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within IMP
IGI		 (PMID:11526078)
(PMID:18287202)		 MGI PMID:11526078 PMID:18287202 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IGI (PMID:18287202) MGI PMID:18287202 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565 		JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 involved_in IGI (MGI:5766856|PMID:26525805) UniProt PMID:26525805 MGI:5766856 NCBI chr 1:133,310,038...133,352,159
Ensembl chr 1:133,310,041...133,352,115 		JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in IMP (MGI:5766856|PMID:26525805) UniProt PMID:26525805 MGI:5766856 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031 		JBrowse link
spinal cord oligodendrocyte cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:18287202) MGI PMID:18287202 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within IDA (PMID:18287202) MGI PMID:18287202 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IDA (PMID:18287202) MGI PMID:18287202 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565 		JBrowse link
spinal cord patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Reln reelin acts_upstream_of_or_within ISO
IMP		 (PMID:16580148) RGD
MGI		 PMID:14648677 PMID:16580148 RGD:2317803 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
spinal cord ventral commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase, RNA-specific, B1 acts_upstream_of_or_within IMP (PMID:20826656) MGI PMID:20826656 NCBI chr10:77,126,561...77,254,125
Ensembl chr10:77,126,560...77,254,104 		JBrowse link
G Dcc DCC netrin 1 receptor acts_upstream_of_or_within IMP (PMID:9126737) MGI PMID:9126737 NCBI chr18:71,386,703...72,484,299
Ensembl chr18:71,386,705...72,484,140 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:10409510) MGI PMID:10409510 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
striatal medium spiny neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b B cell leukemia/lymphoma 11B acts_upstream_of_or_within IMP (PMID:18199763) MGI PMID:18199763 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861 		JBrowse link
G Inhba inhibin beta-A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:16,178,841...16,206,194
Ensembl chr13:16,186,436...16,206,206 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IMP (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464 		JBrowse link
G Zswim6 zinc finger SWIM-type containing 6 involved_in IMP (MGI:6140923|PMID:28433741) UniProt PMID:28433741 MGI:6140923 NCBI chr13:107,861,152...108,026,598
Ensembl chr13:107,861,152...108,026,598 		JBrowse link
striatum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 8:94,794,580...94,825,997
Ensembl chr 8:94,794,582...94,825,556 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in ISO (PMID:18179893) BHF-UCL PMID:18179893 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO
IMP		 (PMID:17360497) RGD
MGI		 PMID:17360497 PMID:22015925 RGD:7248608 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724 		JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:22015925 RGD:7248608 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Foxp1 forkhead box P1 ISO RGD PMID:12815709 RGD:11536004 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IMP (PMID:9886073) MGI PMID:9886073 NCBI chr  X:52,076,955...52,110,537
Ensembl chr  X:52,077,014...52,110,536 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within IMP (PMID:11030759)
(PMID:17715336)		 MGI PMID:11030759 PMID:17715336 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO RGD PMID:18272292 RGD:13462055 NCBI chr15:91,556,994...91,700,327
Ensembl chr15:91,557,378...91,700,323 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Mkks McKusick-Kaufman syndrome acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 2:136,715,700...136,733,422
Ensembl chr 2:136,715,700...136,733,309 		JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IMP (PMID:18443282) MGI PMID:18443282 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924 		JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within IMP (PMID:24844465) MGI PMID:24844465 NCBI chr13:51,805,721...51,838,080
Ensembl chr13:51,805,733...51,838,080 		JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (PMID:17035536) MGI PMID:17035536 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063 		JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 acts_upstream_of_or_within IMP (PMID:20418887) MGI PMID:20418887 NCBI chr14:111,912,547...111,920,576
Ensembl chr14:111,912,529...111,920,573 		JBrowse link
subpallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within IGI (PMID:23042297) MGI PMID:23042297 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IGI (PMID:23042297) MGI PMID:23042297 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16613831) MGI PMID:16613831 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:20943929) MGI PMID:20943929 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IGI (PMID:23042297) MGI PMID:23042297 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:9876181) MGI PMID:9876181 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:11124115) MGI PMID:11124115 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
substantia nigra development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:105,850,014...105,866,579
Ensembl chr 3:105,850,014...105,867,415 		JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr16:84,624,754...84,632,495
Ensembl chr16:84,624,754...84,632,513 		JBrowse link
G Basp1 brain abundant, membrane attached signal protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr15:25,363,363...25,413,850
Ensembl chr15:25,363,363...25,413,850 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:100,165,694...100,176,083
Ensembl chr12:100,165,694...100,176,073 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:87,740,829...87,754,363
Ensembl chr17:87,740,840...87,754,363 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 7:16,649,304...16,657,957
Ensembl chr 7:16,649,304...16,658,039 		JBrowse link
G Ccdc14 coiled-coil domain containing 14 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr16:34,510,940...34,545,574
Ensembl chr16:34,510,986...34,545,572 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031 		JBrowse link
G Ckb creatine kinase, brain involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:111,635,789...111,638,772
Ensembl chr12:111,635,795...111,638,772 		JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:100,465,765...100,472,565
Ensembl chr11:100,465,730...100,482,555 		JBrowse link
G Cox6b1 cytochrome c oxidase, subunit 6B1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 7:30,316,396...30,325,539
Ensembl chr 7:30,316,286...30,325,576 		JBrowse link
G Dynll1 dynein light chain LC8-type 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:115,435,129...115,438,995
Ensembl chr 5:115,435,169...115,439,058 		JBrowse link
G Eno3 enolase 3, beta muscle involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:70,543,973...70,553,339
Ensembl chr11:70,548,028...70,553,339 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within IMP (PMID:17234579) MGI PMID:17234579 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr14:58,308,543...58,350,311
Ensembl chr14:58,308,004...58,350,177 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within IMP (PMID:17234579) MGI PMID:17234579 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G G6pdx glucose-6-phosphate dehydrogenase X-linked involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:73,453,089...73,472,486
Ensembl chr  X:73,453,089...73,472,800 		JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222 		JBrowse link
G Gnb4 guanine nucleotide binding protein (G protein), beta 4 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:32,632,736...32,670,813
Ensembl chr 3:32,634,481...32,670,734 		JBrowse link
G Hspa5 heat shock protein 5 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:34,662,102...34,666,541
Ensembl chr 2:34,661,982...34,667,559 		JBrowse link
G Ina internexin neuronal intermediate filament protein, alpha involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr19:47,003,120...47,013,766
Ensembl chr19:47,003,137...47,013,766 		JBrowse link
G Ldha lactate dehydrogenase A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 7:46,491,698...46,505,051
Ensembl chr 7:46,490,899...46,505,051 		JBrowse link
G Mag myelin-associated glycoprotein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 7:30,598,600...30,614,347
Ensembl chr 7:30,598,601...30,614,298 		JBrowse link
G Maob monoamine oxidase B involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:16,575,520...16,683,605
Ensembl chr  X:16,575,521...16,683,605 		JBrowse link
G Mapkap1 mitogen-activated protein kinase associated protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:34,296,783...34,514,970
Ensembl chr 2:34,296,783...34,514,962 		JBrowse link
G Mbp myelin basic protein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr18:82,492,883...82,603,762
Ensembl chr18:82,493,271...82,603,762 		JBrowse link
G Ndrg2 N-myc downstream regulated gene 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr14:52,142,738...52,151,463
Ensembl chr14:52,142,728...52,151,615 		JBrowse link
G Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:90,724,971...90,735,065
Ensembl chr 2:90,724,978...90,735,171 		JBrowse link
G Padi2 peptidyl arginine deiminase, type II involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:140,633,685...140,679,897
Ensembl chr 4:140,633,655...140,679,897 		JBrowse link
G Plp1 proteolipid protein (myelin) 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:135,720,897...135,739,331
Ensembl chr  X:135,723,420...135,740,482 		JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr15:10,486,104...10,499,149
Ensembl chr15:10,486,104...10,499,149 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133 		JBrowse link
G S100a1 S100 calcium binding protein A1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:90,418,341...90,421,637
Ensembl chr 3:90,418,341...90,421,699 		JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:26,299,443...26,336,138
Ensembl chr 2:26,299,443...26,335,228 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 7:28,466,192...28,488,086
Ensembl chr 7:28,466,160...28,488,086 		JBrowse link
G Suds3 suppressor of defective silencing 3 homolog (S. cerevisiae) involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:117,229,743...117,257,980
Ensembl chr 5:117,229,745...117,254,178 		JBrowse link
G Syngr3 synaptogyrin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:24,904,066...24,908,923
Ensembl chr17:24,904,066...24,908,929 		JBrowse link
G Sypl2 synaptophysin like 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:108,119,582...108,133,915
Ensembl chr 3:108,118,788...108,133,964 		JBrowse link
G Ttbk1 tau tubulin kinase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:46,751,577...46,798,596
Ensembl chr17:46,753,374...46,798,601 		JBrowse link
G Uchl1 ubiquitin carboxy-terminal hydrolase L1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:66,833,464...66,844,577
Ensembl chr 5:66,833,434...66,844,577 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:75,620,121...75,656,667
Ensembl chr11:75,623,695...75,656,671 		JBrowse link
G Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:33,176,160...33,185,310
Ensembl chr 5:33,176,160...33,185,310 		JBrowse link
G Ywhaq tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:21,440,330...21,467,437
Ensembl chr12:21,440,072...21,467,638 		JBrowse link
G Zfp148 zinc finger protein 148 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr16:33,201,145...33,324,273
Ensembl chr16:33,201,206...33,324,733 		JBrowse link
subthalamic nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:18206388) MGI PMID:18206388 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
subthalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:53,318,749...53,321,658
Ensembl chr11:53,318,749...53,321,658 		JBrowse link
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010 		JBrowse link
G Cdk5r2 cyclin dependent kinase 5, regulatory subunit 2 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr 1:74,894,188...74,896,891
Ensembl chr 1:74,894,093...74,896,891 		JBrowse link
superior temporal gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap2 contactin associated protein-like 2 involved_in ISO (PMID:18179893) BHF-UCL PMID:18179893 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446 		JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:91,556,994...91,700,327
Ensembl chr15:91,557,378...91,700,323 		JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within IMP (PMID:14960623) MGI PMID:14960623 NCBI chr19:41,586,263...41,735,714
Ensembl chr19:41,588,696...41,732,104 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:15837932) MGI PMID:15837932 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
telencephalon cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl12 C-X-C motif chemokine ligand 12 involved_in ISO RGD
MGI		 PMID:16971524 GO_REF:0000096 MGI:4417868 RGD:2306584 NCBI chr 6:117,145,496...117,158,329
Ensembl chr 6:117,145,496...117,158,328 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in ISO RGD
MGI		 PMID:16971524 GO_REF:0000096 MGI:4417868 RGD:2306584 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030 		JBrowse link
G Foxb1 forkhead box B1 involved_in IMP (MGI:4887555|PMID:19046377) UniProt PMID:19046377 MGI:4887555 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:18786357), (PMID:20181579) MGI PMID:18786357 PMID:20181579 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within IGI (PMID:14960623) MGI PMID:14960623 NCBI chr19:41,586,263...41,735,714
Ensembl chr19:41,588,696...41,732,104 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within IGI (PMID:14960623) MGI PMID:14960623 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
G Tnr tenascin R acts_upstream_of_or_within IMP (PMID:15034584) MGI PMID:15034584 NCBI chr 1:159,351,170...159,759,299
Ensembl chr 1:159,351,339...159,759,299 		JBrowse link
telencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A ISO RGD PMID:11021977 RGD:2304223 NCBI chr10:122,284,404...122,289,358
Ensembl chr10:122,284,404...122,289,357 		JBrowse link
G Avpr2 arginine vasopressin receptor 2 ISO RGD PMID:11021977 RGD:2304223 NCBI chr  X:72,935,371...72,938,034
Ensembl chr  X:72,935,708...72,939,108 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (PMID:9187146) MGI PMID:9187146 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:9187146) MGI PMID:9187146 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr18:16,721,934...16,942,303
Ensembl chr18:16,721,934...16,942,303 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:18032654) MGI PMID:18032654 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:12571115 RGD:2290000 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:10024361 RGD:8662883 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G Fezf1 Fez family zinc finger 1 involved_in IMP (MGI:4454201|PMID:20431123) UniProt PMID:20431123 MGI:4454201 NCBI chr 6:23,245,043...23,250,942
Ensembl chr 6:23,245,043...23,248,361 		JBrowse link
G Fezf2 Fez family zinc finger 2 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:4454201|PMID:20431123)
(PMID:20431123)		 UniProt
MGI		 PMID:20431123 MGI:4454201 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16613831) MGI PMID:16613831 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:10625551), (PMID:19036983), (PMID:19048639) MGI PMID:10625551 PMID:19036983 PMID:19048639 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gmppa GDP-mannose pyrophosphorylase A acts_upstream_of_or_within IMP (PMID:33755596) MGI PMID:33755596 NCBI chr 1:75,412,555...75,419,823
Ensembl chr 1:75,412,574...75,419,823 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IGI
IMP		 (PMID:18579678)
(PMID:19050759)		 MGI PMID:18579678 PMID:19050759 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within IGI (PMID:20431123)
(PMID:18579678)		 MGI PMID:18579678 PMID:20431123 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:19036983) MGI PMID:19036983 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Kat2a K(lysine) acetyltransferase 2A acts_upstream_of_or_within IMP (PMID:17325035) MGI PMID:17325035 NCBI chr11:100,595,572...100,603,293
Ensembl chr11:100,595,572...100,603,291 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IEP (MGI:5050079|PMID:7909549) UniProt PMID:7909549 MGI:5050079 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lhx2 LIM homeobox protein 2 acts_upstream_of_or_within IMP (PMID:19820705)
(PMID:11165475), (PMID:11719201), (PMID:17493606)		 MGI PMID:11165475 PMID:11719201 PMID:17493606 PMID:19820705 NCBI chr 2:38,229,282...38,259,747
Ensembl chr 2:38,229,293...38,259,745 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within IMP (PMID:17928865) MGI PMID:17928865 NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:18786356) MGI PMID:18786356 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nrgn neurogranin ISO RGD PMID:8783271 RGD:9835396 NCBI chr 9:37,455,789...37,464,041
Ensembl chr 9:37,455,788...37,464,200 		JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:11021977 RGD:2304223 NCBI chr 6:112,450,646...112,467,800
Ensembl chr 6:112,450,644...112,466,904 		JBrowse link
G Pfdn1 prefoldin 1 acts_upstream_of_or_within IMP (PMID:18566413) MGI PMID:18566413 NCBI chr18:36,536,732...36,587,548
Ensembl chr18:36,536,729...36,587,577 		JBrowse link
G Rfx4 regulatory factor X, 4 (influences HLA class II expression) acts_upstream_of_or_within IMP (PMID:19887680) MGI PMID:19887680 NCBI chr10:84,591,895...84,742,402
Ensembl chr10:84,591,926...84,742,402 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17558409) MGI PMID:17558409 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha ISO RGD PMID:22331407 RGD:6484221 NCBI chr 9:119,312,470...119,408,096
Ensembl chr 9:119,312,474...119,408,082 		JBrowse link
G Six3 sine oculis-related homeobox 3 involved_in
acts_upstream_of_or_within		 IMP (MGI:3813369|PMID:18694563)
(PMID:18094027)		 UniProt
MGI		 PMID:18094027 PMID:18694563 MGI:3813369 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Slc1a2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 acts_upstream_of_or_within IMP (PMID:9180080) MGI PMID:9180080 NCBI chr 2:102,488,584...102,621,129
Ensembl chr 2:102,489,004...102,621,129 		JBrowse link
G Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 ISO RGD PMID:12502534 RGD:2316981 NCBI chr17:81,680,534...82,045,816
Ensembl chr17:81,680,534...82,045,806 		JBrowse link
G Slc8a2 solute carrier family 8 (sodium/calcium exchanger), member 2 ISO RGD PMID:12502534 RGD:2316981 NCBI chr 7:15,861,540...15,894,988
Ensembl chr 7:15,863,751...15,894,988 		JBrowse link
G Slc8a3 solute carrier family 8 (sodium/calcium exchanger), member 3 ISO RGD PMID:11036162 RGD:2316983 NCBI chr12:81,244,686...81,380,506
Ensembl chr12:81,244,689...81,379,954 		JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within IMP (PMID:16357211) MGI PMID:16357211 NCBI chr 5:122,377,558...122,402,557
Ensembl chr 5:122,375,911...122,402,523 		JBrowse link
telencephalon regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IGI (PMID:11719201) MGI PMID:11719201 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA
IGI		 (PMID:16855091)
(PMID:11719201)		 MGI PMID:11719201 PMID:16855091 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:18701439) MGI PMID:18701439 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Lhx2 LIM homeobox protein 2 acts_upstream_of_or_within IGI
IMP		 (PMID:11719201) MGI PMID:11719201 NCBI chr 2:38,229,282...38,259,747
Ensembl chr 2:38,229,293...38,259,745 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IMP (PMID:26166575) MGI PMID:26166575 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:18701439) MGI PMID:18701439 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within
involved_in		 ISO
IMP		 (PMID:11060228) RGD
MGI		 PMID:9811591 PMID:11060228 GO_REF:0000096 MGI:4417868 RGD:2306311 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Six3 sine oculis-related homeobox 3 involved_in IMP (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
thalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a3 ATPase, Na+/K+ transporting, alpha 3 polypeptide acts_upstream_of_or_within IMP (PMID:23527305) MGI PMID:23527305 NCBI chr 7:24,677,592...24,705,338
Ensembl chr 7:24,677,592...24,705,383 		JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in ISO (PMID:18179893) BHF-UCL PMID:18179893 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147 		JBrowse link
G Foxb1 forkhead box B1 involved_in IEP (MGI:1931655|PMID:11170346) UniProt PMID:11170346 MGI:1931655 NCBI chr 9:69,664,992...69,668,222
Ensembl chr 9:69,664,992...69,668,222 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:19279136) MGI PMID:19279136 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Kif5a kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr10:127,061,564...127,102,217
Ensembl chr10:127,061,565...127,099,217 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:15342729) MGI PMID:15342729 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Ncam1 neural cell adhesion molecule 1 involved_in ISO RGD
MGI		 PMID:17292800 GO_REF:0000096 MGI:4417868 RGD:2326015 NCBI chr 9:49,413,434...49,710,909
Ensembl chr 9:49,413,436...49,710,225 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within IMP (PMID:11030619) MGI PMID:11030619 NCBI chr11:62,207,132...62,348,200
Ensembl chr11:62,207,252...62,349,367 		JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IMP (PMID:19357274) MGI PMID:19357274 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565 		JBrowse link
G Ptchd1 patched domain containing 1 involved_in IMP (MGI:5779981|PMID:27007844) UniProt PMID:27007844 MGI:5779981 NCBI chr  X:154,352,732...154,407,185
Ensembl chr  X:154,356,451...154,406,810 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:10051750 RGD:10043838 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IGI
IMP		 (PMID:19357274) MGI PMID:19357274 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:19357274) MGI PMID:19357274 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr13:69,721,568...69,759,611
Ensembl chr13:69,721,568...69,759,561 		JBrowse link
G Tal2 T cell acute lymphocytic leukemia 2 acts_upstream_of_or_within IMP (PMID:11071772) MGI PMID:11071772 NCBI chr 4:53,779,701...53,788,712
Ensembl chr 4:53,779,705...53,788,712 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in IEP (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chr11:53,318,749...53,321,658
Ensembl chr11:53,318,749...53,321,658 		JBrowse link
third ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide acts_upstream_of_or_within IMP (MGI:69165|PMID:7525597) ARUK-UCL PMID:7525597 MGI:69165 NCBI chr11:69,490,554...69,496,786
Ensembl chr11:69,490,562...69,496,768 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within IMP (PMID:20080492) MGI PMID:20080492 NCBI chr19:45,549,018...45,566,728
Ensembl chr19:45,549,054...45,568,202 		JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:124,716,146...124,718,032
Ensembl chr 6:124,716,146...124,718,337 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle acts_upstream_of_or_within IMP (PMID:11283949) MGI PMID:11283949 NCBI chr11:68,581,228...68,707,451
Ensembl chr11:68,582,385...68,707,458 		JBrowse link
thyroid-stimulating hormone-secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IDA (PMID:9463347) MGI PMID:9463347 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within IDA (PMID:9463347) MGI PMID:9463347 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IDA (PMID:9463347) MGI PMID:9463347 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:16543408) MGI PMID:16543408 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Lhx3 LIM homeobox protein 3 acts_upstream_of_or_within IMP (PMID:8638120) MGI PMID:8638120 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IMP (PMID:18351662) MGI PMID:18351662 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
vagus nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nav2 neuron navigator 2 acts_upstream_of_or_within IMP (PMID:20184720) MGI PMID:20184720 NCBI chr 7:48,608,796...49,259,838
Ensembl chr 7:48,558,464...49,259,838 		JBrowse link
vagus nerve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna4 plexin A4 acts_upstream_of_or_within IMP (PMID:15814794) MGI PMID:15814794 NCBI chr 6:32,121,478...32,565,127
Ensembl chr 6:32,121,203...32,565,127 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:20939858) MGI PMID:20939858 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
ventral midline determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
ventral midline development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI-Kruppel family member GLI1 acts_upstream_of_or_within IGI (PMID:10725236) MGI PMID:10725236 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP
IGI		 (PMID:10725236) MGI PMID:10725236 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
ventral spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 disabled 1 involved_in IEP (MGI:4849611|PMID:20711475) UniProt PMID:20711475 MGI:4849611 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Dctn1 dynactin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:83,142,702...83,177,103
Ensembl chr 6:83,142,902...83,177,099 		JBrowse link
G Foxp1 forkhead box P1 involved_in IEP (MGI:4849611|PMID:20711475) UniProt PMID:20711475 MGI:4849611 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:11748151) MGI PMID:11748151 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IEP (MGI:4849611|PMID:20711475) UniProt PMID:20711475 MGI:4849611 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lrp8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor involved_in IEP
IBA		 (MGI:4849611|PMID:20711475) UniProt
GO_Central		 PMID:20711475 GO_REF:0000033 MGI:4849611 NCBI chr 4:107,659,337...107,734,037
Ensembl chr 4:107,659,066...107,734,037 		JBrowse link
G Pax6 paired box 6 involved_in IMP (MGI:4834949|PMID:20844123) UniProt PMID:20844123 MGI:4834949 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Reln reelin involved_in IEP (MGI:4849611|PMID:20711475) UniProt PMID:20711475 MGI:4849611 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEP (MGI:4849611|PMID:20711475) UniProt PMID:20711475 MGI:4849611 NCBI chr19:27,190,070...27,231,631
Ensembl chr19:27,193,884...27,231,631 		JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in IEP (MGI:5751349|PMID:25826454) UniProt PMID:25826454 MGI:5751349 NCBI chr 9:15,150,197...15,170,717
Ensembl chr 9:15,150,341...15,170,712 		JBrowse link
ventral spinal cord interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn4 forkhead box N4 involved_in IMP (MGI:4834949|PMID:20844123) UniProt PMID:20844123 MGI:4834949 NCBI chr 5:114,392,225...114,412,486
Ensembl chr 5:114,392,225...114,411,868 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:10934027) MGI PMID:10934027 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within IDA (PMID:19666821) MGI PMID:19666821 NCBI chr 3:143,894,291...143,911,016
Ensembl chr 3:143,894,291...143,910,981 		JBrowse link
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in IMP (MGI:3587461|PMID:16020526) UniProt PMID:16020526 MGI:3587461 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:119,156,286...119,166,145
Ensembl chr 2:119,156,265...119,166,443 		JBrowse link
G Foxn4 forkhead box N4 involved_in IMP (MGI:3587461|PMID:16020526), (MGI:3765356|PMID:17728344) UniProt PMID:16020526 PMID:17728344 MGI:3587461 MGI:3765356 NCBI chr 5:114,392,225...114,412,486
Ensembl chr 5:114,392,225...114,411,868 		JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within IMP (PMID:10217145) MGI PMID:10217145 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163 		JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbx1 developing brain homeobox 1 acts_upstream_of_or_within IMP (PMID:11239429) MGI PMID:11239429 NCBI chr 7:49,281,247...49,286,583
Ensembl chr 7:49,281,247...49,286,597 		JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 acts_upstream_of_or_within IMP (PMID:22932389) MGI PMID:22932389 NCBI chr19:25,587,609...25,601,285
Ensembl chr19:25,587,665...25,601,285 		JBrowse link
G Lhx3 LIM homeobox protein 3 acts_upstream_of_or_within IDA (PMID:19666821) MGI PMID:19666821 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 acts_upstream_of_or_within IMP (PMID:20844123) MGI PMID:20844123 NCBI chr 8:12,445,519...12,449,555
Ensembl chr 8:12,445,295...12,450,126 		JBrowse link
ventricular system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak8 adenylate kinase 8 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 2:28,588,287...28,703,177
Ensembl chr 2:28,590,176...28,703,177 		JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B acts_upstream_of_or_within IMP (PMID:21636789) MGI PMID:21636789 NCBI chr 4:46,450,926...46,472,657
Ensembl chr 4:46,450,902...46,472,657 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IMP (PMID:23160237) MGI PMID:23160237 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:24695551) MGI PMID:24695551 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within IMP (PMID:29115376) MGI PMID:29115376 NCBI chr15:82,012,101...82,026,404
Ensembl chr15:82,012,123...82,026,404 		JBrowse link
G Celsr2 cadherin, EGF LAG seven-pass G-type receptor 2 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 3:108,298,164...108,323,416
Ensembl chr 3:108,298,167...108,323,383 		JBrowse link
G Cenpf centromere protein F involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:189,372,803...189,420,302
Ensembl chr 1:189,372,803...189,420,283 		JBrowse link
G Coro1c coronin, actin binding protein 1C acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 5:113,980,500...114,046,767
Ensembl chr 5:113,980,497...114,046,819 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr19:45,549,018...45,566,728
Ensembl chr19:45,549,054...45,568,202 		JBrowse link
G Hydin HYDIN, axonemal central pair apparatus protein acts_upstream_of_or_within IMP (PMID:18250199), (PMID:4732188) MGI PMID:4732188 PMID:18250199 MGI:61244 MGI:61312 MGI:71926 NCBI chr 8:110,993,600...111,336,885
Ensembl chr 8:110,993,609...111,336,885 		JBrowse link
G Kif27 kinesin family member 27 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr13:58,432,541...58,512,559
Ensembl chr13:58,435,316...58,506,936 		JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 7:3,680,788...3,696,188
Ensembl chr 7:3,680,788...3,696,522 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IMP (PMID:18571096) MGI PMID:18571096 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Mnat1 menage a trois 1 acts_upstream_of_or_within IMP (PMID:17276355) MGI PMID:17276355 NCBI chr12:73,158,957...73,320,762
Ensembl chr12:73,170,491...73,320,762 		JBrowse link
G Nme5 NME/NM23 family member 5 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr18:34,695,687...34,712,168
Ensembl chr18:34,695,687...34,712,168 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 acts_upstream_of_or_within IMP (PMID:23849778) MGI PMID:23849778 NCBI chr18:7,088,233...7,298,272
Ensembl chr18:7,088,209...7,297,936 		JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor (GEF) 2 involved_in IMP (MGI:3757825|PMID:17826737) UniProt PMID:17826737 MGI:3757825 NCBI chr 3:78,969,818...79,194,681
Ensembl chr 3:78,969,823...79,193,824 		JBrowse link
G Sema6d sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D acts_upstream_of_or_within IDA
ISO		 (PMID:14977921) MGI PMID:14977921 NCBI chr 2:123,931,089...124,509,711
Ensembl chr 2:123,931,889...124,509,690 		JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (PMID:17035536) MGI PMID:17035536 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063 		JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of IMP (PMID:12167721) MGI PMID:12167721 NCBI chr16:16,570,880...16,647,177
Ensembl chr16:16,570,880...16,647,320 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within IMP (PMID:19732765) MGI PMID:19732765 NCBI chr 2:66,014,131...66,087,144
Ensembl chr 2:66,014,671...66,086,961 		JBrowse link
G Ttn titin acts_upstream_of_or_within IMP (PMID:17360664) MGI PMID:17360664 NCBI chr 2:76,534,324...76,812,901
Ensembl chr 2:76,534,324...76,812,891 		JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:21746835) MGI PMID:21746835 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
G Wdr89 WD repeat domain 89 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr12:75,677,368...75,716,311
Ensembl chr12:75,677,370...75,716,311 		JBrowse link
ventricular zone neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dct dopachrome tautomerase acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:16857183) MGI
GO_Central		 PMID:16857183 GO_REF:0000033 NCBI chr14:118,250,202...118,289,658
Ensembl chr14:118,250,202...118,289,656 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in IMP (MGI:4452541|PMID:20410112) UniProt PMID:20410112 MGI:4452541 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in IMP (MGI:4452541|PMID:20410112) UniProt PMID:20410112 MGI:4452541 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
vertebrate eye-specific patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement component 1, q subcomponent, alpha polypeptide involved_in IMP (MGI:3801262|PMID:18083105) ARUK-UCL PMID:18083105 MGI:3801262 NCBI chr 4:136,623,227...136,626,155
Ensembl chr 4:136,623,228...136,626,114 		JBrowse link
G C3 complement component 3 involved_in IMP (MGI:3801262|PMID:18083105) ARUK-UCL PMID:18083105 MGI:3801262 NCBI chr17:57,510,967...57,535,136
Ensembl chr17:57,510,970...57,535,136 		JBrowse link
G Itgam integrin alpha M involved_in IMP (MGI:6189359|PMID:22632727) ARUK-UCL PMID:22632727 MGI:6189359 NCBI chr 7:127,661,812...127,717,663
Ensembl chr 7:127,661,812...127,717,663 		JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:12885554) MGI PMID:12885554 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522 		JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit acts_upstream_of_or_within IMP (PMID:8719615) MGI PMID:8719615 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
G Kcne1 potassium voltage-gated channel, Isk-related subfamily, member 1 involved_in IMP (PMID:11223304) MGI PMID:11223304 NCBI chr16:92,142,889...92,156,356
Ensembl chr16:92,142,870...92,156,356 		JBrowse link
visceral motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isl1 ISL1 transcription factor, LIM/homeodomain acts_upstream_of_or_within IGI (PMID:14766174) MGI PMID:14766174 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Isl2 insulin related protein 2 (islet 2) acts_upstream_of_or_within IMP
IGI		 (PMID:14766174) MGI PMID:14766174 NCBI chr 9:55,445,961...55,454,951
Ensembl chr 9:55,445,956...55,453,464 		JBrowse link
G Tbx20 T-box 20 involved_in IMP (MGI:3604925|PMID:15843409) BHF-UCL PMID:15843409 MGI:3604925 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
Wnt signaling pathway involved in forebrain neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI
IMP		 (PMID:14715945)
(PMID:16920270)		 MGI PMID:14715945 PMID:16920270 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IMP (PMID:10631167) MGI PMID:10631167 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28576
    developmental process 7377
      anatomical structure development 6849
        system development 4671
          central nervous system development 1220
            astrocyte differentiation + 101
            brain development + 911
            central nervous system maturation + 9
            central nervous system morphogenesis + 3
            central nervous system neuron differentiation + 221
            central nervous system segmentation + 5
            establishment of blood-brain barrier + 20
            larval central nervous system remodeling 0
            microglia differentiation + 18
            oligodendrocyte differentiation + 151
            preganglionic parasympathetic fiber development + 20
            spinal cord development + 142
            ventral cord development 0
            ventral midline development + 5
            vertebrate eye-specific patterning 3
Path 2
Term Annotations click to browse term
  biological_process 28576
    developmental process 7377
      anatomical structure development 6849
        multicellular organism development 5442
          system development 4671
            nervous system development 2860
              central nervous system development 1220
                astrocyte differentiation + 101
                brain development + 911
                central nervous system maturation + 9
                central nervous system morphogenesis + 3
                central nervous system neuron differentiation + 221
                central nervous system segmentation + 5
                establishment of blood-brain barrier + 20
                larval central nervous system remodeling 0
                microglia differentiation + 18
                oligodendrocyte differentiation + 151
                preganglionic parasympathetic fiber development + 20
                spinal cord development + 142
                ventral cord development 0
                ventral midline development + 5
                vertebrate eye-specific patterning 3
paths to the root