Large1 (LARGE xylosyl- and glucuronyltransferase 1) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Large1 (LARGE xylosyl- and glucuronyltransferase 1) Mus musculus
Analyze
Symbol: Large1
Name: LARGE xylosyl- and glucuronyltransferase 1
RGD ID: 1318928
MGI Page MGI
Description: Exhibits glucuronosyltransferase activity and xylosyltransferase activity. Involved in several processes, including muscle cell cellular homeostasis; protein O-linked mannosylation; and skeletal muscle organ development. Localizes to intracellular membrane-bounded organelle. Is expressed in nervous system and retina. Used to study facioscapulohumeral muscular dystrophy; muscular dystrophy-dystroglycanopathy; and muscular dystrophy-dystroglycanopathy type B6. Human ortholog(s) of this gene implicated in congenital muscular dystrophy-dystroglycanopathy type A6 and muscular dystrophy-dystroglycanopathy type B6. Orthologous to human LARGE1 (LARGE xylosyl- and glucuronyltransferase 1); INTERACTS WITH 1,1-dichloroethene; 1,2-dimethylhydrazine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: acetylglucosaminyltransferase-like 1A; BPFD#3; BPFD#36; e; enr; fg; frog; froggy; glycosyltransferase-like protein LARGE1; Gyltl1a; Large; like-glycosyltransferase; Mbp-1; Mbp1; mKIAA0609; myd; myodystrophy
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39873,541,226 - 74,080,279 (-)NCBIGRCm39mm39
GRCm38872,814,598 - 73,353,721 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl872,814,599 - 73,353,540 (-)EnsemblGRCm38mm10GRCm38
MGSCv37875,338,498 - 75,876,455 (-)NCBIGRCm37mm9NCBIm37
MGSCv36875,710,671 - 76,248,628 (-)NCBImm8
Celera877,131,292 - 77,664,765 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map835.08NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal auditory brainstem response waveform shape  (IAGP)
abnormal bone structure  (IEA)
abnormal diaphragm morphology  (IAGP)
abnormal enzyme/coenzyme activity  (IAGP)
abnormal eye electrophysiology  (IAGP)
abnormal gait  (IAGP)
abnormal limb posture  (IAGP)
abnormal muscle morphology  (IAGP)
abnormal muscle physiology  (IAGP)
abnormal myelination  (IAGP)
abnormal myocardial fiber morphology  (IAGP)
abnormal myocardium layer morphology  (IAGP)
abnormal peripheral nervous system regeneration  (IAGP)
abnormal posture  (IAGP)
abnormal retinal ganglion layer morphology  (IAGP)
abnormal retinal inner nuclear layer morphology  (IAGP)
abnormal retinal layer morphology  (IAGP)
abnormal retinal neuronal layer morphology  (IAGP)
abnormal retinal outer plexiform layer morphology  (IAGP)
abnormal retinal vasculature morphology  (IAGP)
abnormal Schwann cell morphology  (IAGP)
abnormal sciatic nerve morphology  (IAGP)
abnormal skeletal muscle fiber morphology  (IAGP)
abnormal skeletal muscle morphology  (IAGP)
abnormal soleus morphology  (IAGP)
abnormal spinal nerve morphology  (IAGP)
abnormal tongue morphology  (IAGP)
abnormal vitreous body morphology  (IAGP)
absent Schwann cells  (IAGP)
calcified muscle  (IAGP)
centrally nucleated skeletal muscle fibers  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased grip strength  (IAGP)
dilated cardiomyopathy  (IAGP)
disorganized retinal ganglion layer  (IAGP)
disorganized retinal outer plexiform layer  (IAGP)
dystrophic muscle  (IAGP)
increased circulating creatine kinase level  (IAGP)
increased circulating creatinine level  (IAGP)
increased variability of skeletal muscle fiber size  (IAGP)
kyphosis  (IAGP)
limb grasping  (IAGP)
male infertility  (IAGP)
muscle degeneration  (IAGP)
myopathy  (IAGP)
myositis  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality  (IAGP)
premature death  (IAGP)
reduced female fertility  (IAGP)
reduced fertility  (IAGP)
sensorineural hearing loss  (IAGP)
skeletal muscle degeneration  (IEA)
skeletal muscle endomysial fibrosis  (IAGP)
skeletal muscle fiber degeneration  (IAGP)
skeletal muscle fiber necrosis  (IAGP)
thin retinal inner nuclear layer  (IAGP)
thin retinal outer nuclear layer  (IAGP)
thin retinal outer plexiform layer  (IAGP)
vitreal fibroplasia  (IAGP)
vitreous body deposition  (IAGP)
References

Additional References at PubMed
PMID:647395   PMID:939913   PMID:1235495   PMID:3155690   PMID:6447833   PMID:7472477   PMID:7506762   PMID:7534359   PMID:7602333   PMID:7613034   PMID:7739634   PMID:8889548  
PMID:9166581   PMID:9570957   PMID:9892679   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12140558   PMID:12354795   PMID:12417403   PMID:12477932  
PMID:12676797   PMID:12925572   PMID:14610273   PMID:14691545   PMID:15184894   PMID:15210115   PMID:15226823   PMID:15389724   PMID:15489334   PMID:15788414   PMID:15797722   PMID:15958417  
PMID:16098969   PMID:16111892   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16819976   PMID:16956587   PMID:17131200   PMID:17452335   PMID:17803675   PMID:17967808   PMID:18077674  
PMID:19017726   PMID:19321787   PMID:19346129   PMID:19494113   PMID:19633189   PMID:19797173   PMID:20044576   PMID:21129441   PMID:21203384   PMID:21267068   PMID:21347376   PMID:21460210  
PMID:21533062   PMID:21628317   PMID:21873635   PMID:21930648   PMID:21970971   PMID:22223806   PMID:22270369   PMID:22728091   PMID:22734004   PMID:22865473   PMID:23125099   PMID:23135544  
PMID:23222475   PMID:23798567   PMID:24132234   PMID:24234655   PMID:24256719   PMID:24635668   PMID:24722207   PMID:24753587   PMID:24952961   PMID:25138275   PMID:25198651   PMID:25279699  
PMID:25457550   PMID:25661440   PMID:25710816   PMID:25976249   PMID:26306834   PMID:27467128   PMID:29360985   PMID:29915039   PMID:32290105   PMID:32453729  


Genomics

Comparative Map Data
Large1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39873,541,226 - 74,080,279 (-)NCBIGRCm39mm39
GRCm38872,814,598 - 73,353,721 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl872,814,599 - 73,353,540 (-)EnsemblGRCm38mm10GRCm38
MGSCv37875,338,498 - 75,876,455 (-)NCBIGRCm37mm9NCBIm37
MGSCv36875,710,671 - 76,248,628 (-)NCBImm8
Celera877,131,292 - 77,664,765 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map835.08NCBI
LARGE1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2233,162,226 - 33,922,841 (-)EnsemblGRCh38hg38GRCh38
GRCh382233,162,237 - 33,922,824 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372233,668,509 - 34,316,464 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362231,999,063 - 32,646,410 (-)NCBINCBI36hg18NCBI36
Build 342231,993,616 - 32,640,964NCBI
Celera2217,471,158 - 18,118,297 (-)NCBI
Cytogenetic Map22q12.3NCBI
HuRef2216,626,665 - 17,273,268 (-)NCBIHuRef
CHM1_12233,628,484 - 34,276,127 (-)NCBICHM1_1
Large1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01912,481,563 - 12,945,320 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1912,481,540 - 12,942,963 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01923,595,328 - 24,054,765 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41912,043,818 - 12,497,663 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11912,049,826 - 12,369,988 (-)NCBI
Celera1911,480,096 - 11,923,685 (-)NCBICelera
Cytogenetic Map19p12-p11NCBI
Large1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540541,891,430 - 42,225,066 (-)NCBIChiLan1.0ChiLan1.0
LARGE1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12232,137,280 - 32,778,639 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v02214,077,463 - 14,929,250 (-)NCBIMhudiblu_PPA_v0panPan3
LARGE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1029,919,521 - 30,395,787 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11029,875,381 - 30,396,934 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Large1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364926,160,979 - 6,657,491 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LARGE1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.25110,211,538 - 110,349,654 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LARGE1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11916,080,482 - 16,704,968 (-)NCBI
ChlSab1.1 Ensembl1916,080,430 - 16,549,495 (-)Ensembl
Large1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247501,190,712 - 1,524,051 (+)NCBI

Position Markers
Results_ER_8_29_95_1_17.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38873,174,200 - 73,174,370UniSTSGRCm38
MGSCv37875,698,099 - 75,698,269UniSTSGRCm37
Celera877,485,301 - 77,485,471UniSTS
Cytogenetic Map8C1UniSTS
cM Map834.0UniSTS
Whitehead_YAC8 UniSTS
D8Mit303  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38872,849,157 - 72,849,275UniSTSGRCm38
MGSCv37875,373,056 - 75,373,174UniSTSGRCm37
Celera877,164,697 - 77,164,815UniSTS
Cytogenetic Map8C1UniSTS
cM Map833.0UniSTS
Whitehead Genetic835.0UniSTS
Whitehead_YAC8 UniSTS
D8Mit341  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38872,952,849 - 72,952,995UniSTSGRCm38
MGSCv37875,476,748 - 75,476,894UniSTSGRCm37
Celera877,267,659 - 77,267,803UniSTS
Cytogenetic Map8C1UniSTS
cM Map833.0UniSTS
Whitehead Genetic835.0UniSTS
Whitehead_YAC8 UniSTS
AJ006278  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38872,814,739 - 72,814,838UniSTSGRCm38
MGSCv37875,338,638 - 75,338,737UniSTSGRCm37
Celera877,131,432 - 77,131,531UniSTS
Cytogenetic Map8C1UniSTS
cM Map834.0UniSTS
Whitehead/MRC_RH8776.91UniSTS
RH125345  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38873,199,392 - 73,199,476UniSTSGRCm38
MGSCv37875,723,291 - 75,723,375UniSTSGRCm37
Celera877,513,406 - 77,513,490UniSTS
Cytogenetic Map8C1UniSTS
cM Map834.0UniSTS
DXS7708  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38872,998,432 - 72,998,530UniSTSGRCm38
MGSCv37875,522,331 - 75,522,429UniSTSGRCm37
Celera877,306,547 - 77,306,645UniSTS
Cytogenetic Map8C1UniSTS
cM Map834.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:961
Count of miRNA genes:355
Interacting mature miRNAs:426
Transcripts:ENSMUST00000004497, ENSMUST00000119826, ENSMUST00000146249
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001317391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC005743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC006943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC115798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC157365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC158562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC171678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC171917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ006278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW490661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC100399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC125487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC125489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ442282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN699283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM141820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000004497   ⟹   ENSMUSP00000004497
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,814,599 - 73,352,556 (-)Ensembl
RefSeq Acc Id: ENSMUST00000119826   ⟹   ENSMUSP00000112617
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,814,599 - 73,353,540 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146249
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl873,045,064 - 73,098,913 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212459   ⟹   ENSMUSP00000148336
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,814,599 - 73,353,540 (-)Ensembl
RefSeq Acc Id: NM_001317391   ⟹   NP_001304320
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,541,226 - 74,080,168 (-)NCBI
GRCm38872,814,598 - 73,353,540 (-)NCBI
Sequence:
RefSeq Acc Id: NM_010687   ⟹   NP_034817
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,541,226 - 74,080,168 (-)NCBI
GRCm38872,814,598 - 73,353,540 (-)NCBI
MGSCv37875,338,498 - 75,876,455 (-)RGD
Celera877,131,292 - 77,664,765 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030243312   ⟹   XP_030099172
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,541,227 - 73,940,864 (-)NCBI
GRCm38872,814,599 - 73,132,269 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003947238
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,541,227 - 74,080,279 (-)NCBI
GRCm38872,814,599 - 73,353,721 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034817   ⟸   NM_010687
- UniProtKB: Q9Z1M7 (UniProtKB/Swiss-Prot),   Q059X9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001304320   ⟸   NM_001317391
- UniProtKB: Q9Z1M7 (UniProtKB/Swiss-Prot),   Q059X9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030099172   ⟸   XM_030243312
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000112617   ⟸   ENSMUST00000119826
RefSeq Acc Id: ENSMUSP00000148336   ⟸   ENSMUST00000212459
RefSeq Acc Id: ENSMUSP00000004497   ⟸   ENSMUST00000004497

Promoters
RGD ID:8667493
Promoter ID:EPDNEW_M11778
Type:initiation region
Name:Large1_1
Description:Mus musculus LARGE xylosyl- and glucuronyltransferase 1 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38873,353,503 - 73,353,563EPDNEW
RGD ID:6843372
Promoter ID:MM_KWN:54887
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000004497,   ENSMUST00000119826
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36875,876,446 - 75,878,417 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1342270 AgrOrtholog
Ensembl Genes ENSMUSG00000004383 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000004497 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000112617 UniProtKB/Swiss-Prot
  ENSMUSP00000148336 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000004497 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000119826 UniProtKB/Swiss-Prot
  ENSMUST00000212459 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 3.90.550.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Glyco_trans_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16795 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1342270 ENTREZGENE
NCBI Gene 16795 ENTREZGENE
Pfam Glyco_transf_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Large1 PhenoGen
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.324371 ENTREZGENE
UniProt D9IG22_MOUSE UniProtKB/TrEMBL
  LARG1_MOUSE UniProtKB/Swiss-Prot
  Q059X9 ENTREZGENE, UniProtKB/TrEMBL
  Q9Z1M7 ENTREZGENE
UniProt Secondary Q497S9 UniProtKB/Swiss-Prot
  Q6P7U2 UniProtKB/Swiss-Prot
  Q80TW0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-09-20 Large1  LARGE xylosyl- and glucuronyltransferase 1  Large  like-glycosyltransferase  Symbol and/or name change 5135510 APPROVED