Skull11_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Skull11_m (skull morphology 11 (mouse)) Mus musculus

Symbol: Skull11_m
Name: skull morphology 11 (mouse)
RGD ID: 1301441
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39848,190,168 - 82,190,288MOUSEQTLGRCm39
GRCm38847,737,134 - 81,737,254MOUSEQTLGRCm38
MGSCv37850,215,931 - 84,216,051 (+)MOUSEQTLGRCm37
MGSCv3856,024,262 - 92,024,262RGD
cM Map832.3MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Skull11_mMousecraniofacial phenotype  IEA 704405Created by mouse qtl pipelineMGI 
Skull11_mMouseenlarged cranium  IEA 5509061 MGI 
Skull11_mMouseskeleton phenotype  IEA 704405Created by mouse qtl pipelineMGI 

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline


1 to 20 of 1054 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
9640195Gm31786predicted gene, 3178684819774248203227Mouse
401715266LOC131374460STARR-seq mESC enhancer starr_2141684821252548215991Mouse
401704935LOC131374461STARR-seq mESC enhancer starr_2141984825112848254230Mouse
16108191700061N14RikRIKEN cDNA 1700061N14 gene84826475948271252Mouse
6893260Cldn24claudin 2484827517848275840Mouse
1313201Cldn22claudin 2284827750148278511Mouse
1621565Wwc2WW, C2 and coiled-coil domain containing 284827911748443579Mouse
10032188Gm39173predicted gene, 3917384839613148406760Mouse
9644007Gm31984predicted gene, 3198484842182348428862Mouse
401711204LOC131374462STARR-seq mESC enhancer starr_2142284842584948428499Mouse
401706612LOC131374463STARR-seq mESC enhancer starr_2142384843238548433203Mouse
9640223Gm32052predicted gene, 3205284845527448462587Mouse
401717327LOC131374464STARR-seq mESC enhancer starr_2142684847966848481500Mouse
401709199LOC131374465STARR-seq mESC enhancer starr_2142784848610248489804Mouse
1553363DctddCMP deaminase84855212748594702Mouse
401710736LOC131374466STARR-seq mESC enhancer starr_2142884855775848559883Mouse
10015560Gm39174predicted gene, 3917484859725048607583Mouse
401712092LOC131374467STARR-seq mESC enhancer starr_2143084859837948600295Mouse
401715527LOC131374468STARR-seq mESC enhancer starr_2143184862684048629348Mouse
401709500LOC131374469STARR-seq mESC enhancer starr_2143284862995848635296Mouse

1 to 20 of 1054 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 60 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301139Lmr10_mleishmaniasis resistance 10 (mouse)Not determined83532109757797633Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88079340489740987Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871740461124622354Mouse

1 to 10 of 60 rows


Database
Acc Id
Source(s)
MGD MGI:2149693

Note Type Note Reference