Gm7827 (predicted gene 7827) - Rat Genome Database
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Gene: Gm7827 (predicted gene 7827) Mus musculus
Analyze
Symbol: Gm7827
Name: predicted gene 7827
RGD ID: 2295106
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: EG665858; uncharacterized protein LOC665858
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,542,508 - 71,624,100 (+)NCBIGRCm39mm39
GRCm38871,091,701 - 71,171,456 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37873,660,228 - 73,686,492 (+)NCBIGRCm37mm9NCBIm37
MGSCv36874,065,318 - 74,091,582 (+)NCBImm8
Cytogenetic Map8B3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466305   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Position Markers
D8Mit27  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,136,783 - 71,136,987UniSTSGRCm38
GRCm38871,856,637 - 71,856,827UniSTSGRCm38
MGSCv37873,660,682 - 73,660,886UniSTSGRCm37
MGSCv37874,380,536 - 74,380,726UniSTSGRCm37
Cytogenetic Map8B3.3UniSTS
cM Map833.0UniSTS
cM Map8 UniSTS
Whitehead Genetic835.0UniSTS
D8Mit72  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,136,855 - 71,137,028UniSTSGRCm38
GRCm38871,856,596 - 71,856,755UniSTSGRCm38
MGSCv37873,660,754 - 73,660,927UniSTSGRCm37
MGSCv37874,380,495 - 74,380,654UniSTSGRCm37
Cytogenetic Map8B3.3UniSTS
cM Map833.0UniSTS
cM Map8 UniSTS
Whitehead Genetic835.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83201654471287993Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3201654471287993Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3201654471287993Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3201654471287993Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: NM_001324526   ⟹   NP_001311455
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,593,013 - 71,624,100 (+)NCBI
GRCm38871,140,369 - 71,171,456 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312933   ⟹   XP_017168422
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,559,034 - 71,624,099 (+)NCBI
GRCm38871,106,390 - 71,171,455 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312934   ⟹   XP_017168423
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,587,222 - 71,624,099 (+)NCBI
GRCm38871,134,578 - 71,171,455 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312935   ⟹   XP_017168424
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,544,345 - 71,624,099 (+)NCBI
GRCm38871,091,701 - 71,171,455 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312936   ⟹   XP_017168425
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,578,065 - 71,624,099 (+)NCBI
GRCm38871,125,421 - 71,171,455 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154237   ⟹   XP_036010130
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,542,508 - 71,624,099 (+)NCBI
RefSeq Acc Id: XM_036154238   ⟹   XP_036010131
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,559,918 - 71,624,099 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_017168424   ⟸   XM_017312935
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017168422   ⟸   XM_017312933
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017168425   ⟸   XM_017312936
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017168423   ⟸   XM_017312934
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001311455   ⟸   NM_001324526
- Sequence:
RefSeq Acc Id: XP_036010130   ⟸   XM_036154237
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036010131   ⟸   XM_036154238
- Peptide Label: isoform X4


Additional Information

Database Acc Id Source(s)
MGD MGI:3646513 ENTREZGENE
NCBI Gene 665858 ENTREZGENE
PhenoGen Gm7827 PhenoGen
UniGene Mm.411658 ENTREZGENE