Map1s (microtubule-associated protein 1S)

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Gene: Map1s (microtubule-associated protein 1S) Mus musculus

Analyze

Symbol:

Map1s

Name:

microtubule-associated protein 1S

RGD ID:

1616467

MGI Page

MGI

Description:

Exhibits actin filament binding activity; identical protein binding activity; and microtubule binding activity. Involved in brain development and microtubule cytoskeleton organization. Localizes to dendrite; microtubule cytoskeleton; and neuronal cell body. Is expressed in brain and spinal cord. Orthologous to human MAP1S (microtubule associated protein 1S); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

6430517J16Rik; Bpy2; BPY2 interacting protein 1; BPY2-interacting protein 1; Bpy2ip1; Ma; MAP-1S; Map8; microtubule-associated protein 8; Mta; Mtap1s; VCY2; VCY2IP1

RGD Orthologs

Human

Rat

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MAP1S (microtubule associated protein 1S)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Rattus norvegicus (Norway rat):	Map1s (microtubule-associated protein 1S)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Pan paniscus (bonobo/pygmy chimpanzee):	MAP1S (microtubule associated protein 1S)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MAP1S (microtubule associated protein 1S)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Map1s (microtubule associated protein 1S)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MAP1S (microtubule associated protein 1S)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	MAP1S (microtubule associated protein 1S)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Map1s (microtubule associated protein 1S)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Map1s (microtubule-associated protein 1S)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	MAP1S (microtubule associated protein 1S)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	map1sb (microtubule-associated protein 1Sb)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|TreeFam\|ZFIN)
Danio rerio (zebrafish):	map1sa (microtubule-associated protein 1Sa)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|TreeFam\|ZFIN)
Caenorhabditis elegans (roundworm):	maph-1.1	Alliance	DIOPT (InParanoid\|OrthoInspector\|Roundup)
Caenorhabditis elegans (roundworm):	maph-1.2	Alliance	DIOPT (InParanoid\|OrthoInspector\|Roundup)
Caenorhabditis elegans (roundworm):	maph-1.3	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	futsch	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|Roundup\|TreeFam)

Related Pseudogenes:

Gm18681

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	71,358,618 - 71,370,173 (+)	NCBI	GRCm39		mm39
GRCm38	8	70,905,974 - 70,917,529 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	70,905,932 - 70,917,529 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	73,429,873 - 73,441,428 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	73,834,976 - 73,846,514 (+)	NCBI			mm8
Celera	8	73,467,068 - 73,478,623 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

1,2-dimethylhydrazine (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-methylcholine (ISO)

acetamide (ISO)

benzene (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (ISO)

cadmium dichloride (ISO)

choline (EXP)

cisplatin (ISO)

clofibrate (EXP)

cyclosporin A (ISO)

decabromodiphenyl ether (ISO)

endosulfan (ISO)

enzyme inhibitor (ISO)

ethanol (EXP)

folic acid (EXP)

L-methionine (EXP)

N-nitrosodiethylamine (EXP)

orphenadrine (ISO)

paracetamol (EXP,ISO)

perfluorooctanoic acid (ISO)

piperonyl butoxide (EXP)

tetrachloromethane (ISO)

tungsten (EXP)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA)

axonogenesis (IBA)

brain development (IEP)

dendrite development (IBA)

microtubule bundle formation (ISO,ISS)

microtubule cytoskeleton organization (IBA,IDA)

nervous system development (IEP)

neuron projection morphogenesis (ISS)

regulation of chromatin disassembly (ISO,ISS)

regulation of microtubule depolymerization (IBA)

Cellular Component

cell junction (ISO)

cell projection (ISO)

cytoplasm (IEA)

cytoskeleton (IEA)

cytosol (IBA,ISO,ISS)

dendrite (IBA,IDA)

microtubule (IBA,ISO)

microtubule associated complex (IBA)

microtubule cytoskeleton (IDA)

neuronal cell body (IBA,IDA)

nucleolus (ISO)

nucleoplasm (ISO)

nucleus (ISO,ISS)

perinuclear region of cytoplasm (ISO,ISS)

spindle (ISO)

synapse (IBA,ISO)

Molecular Function

actin binding (IBA)

actin filament binding (IDA,ISO)

beta-tubulin binding (ISO,ISS)

deoxyribonuclease activity (ISO)

DNA binding (ISO,ISS)

identical protein binding (IDA)

microtubule binding (IBA,IDA,ISO)

protein binding (ISO)

tubulin binding (IDA,ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal autophagosome formation (IAGP)

abnormal autophagy (IAGP)

abnormal myocardial fiber morphology (IAGP)

increased sensitivity to induced morbidity/mortality (IAGP)

References

References - curated


1.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:12520002	PMID:14610273	PMID:15528209	PMID:15782199	PMID:16141072
PMID:16141073	PMID:16297881	PMID:16565160	PMID:18799693	PMID:21262964	PMID:21267068	PMID:21486449	PMID:21873635	PMID:22037873	PMID:22301994	PMID:26565030	PMID:26750654
PMID:27236336	PMID:28386016	PMID:32325033

Genomics

Comparative Map Data

Map1s
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	71,358,618 - 71,370,173 (+)	NCBI	GRCm39		mm39
GRCm38	8	70,905,974 - 70,917,529 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	70,905,932 - 70,917,529 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	73,429,873 - 73,441,428 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	73,834,976 - 73,846,514 (+)	NCBI			mm8
Celera	8	73,467,068 - 73,478,623 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI

MAP1S
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	17,719,242 - 17,734,513 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	17,719,480 - 17,734,513 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	17,830,303 - 17,845,324 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	17,691,303 - 17,706,324 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	19	17,691,302 - 17,706,324	NCBI
Celera	19	17,731,926 - 17,747,113 (+)	NCBI
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	17,396,489 - 17,410,239 (+)	NCBI		HuRef
CHM1_1	19	17,829,785 - 17,844,852 (+)	NCBI		CHM1_1

Map1s
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	16	20,268,663 - 20,278,850 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,267,581 - 20,278,814 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,126,207 - 20,136,394 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	19,017,018 - 19,027,148 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	16	19,017,014 - 19,027,144 (-)	NCBI
Celera	16	18,710,209 - 18,720,404 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

MAP1S
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	18,165,267 - 18,192,959 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	18,178,445 - 18,192,873 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	17,201,883 - 17,217,116 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

MAP1S
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	20	45,147,751 - 45,162,408 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	20	45,147,720 - 45,162,431 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Map1s
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936596	3,286,031 - 3,296,855 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MAP1S
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	59,999,162 - 60,029,939 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	60,003,116 - 60,043,133 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	59,583,390 - 59,610,014 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MAP1S
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	16,192,707 - 16,208,729 (+)	NCBI
ChlSab1.1 Ensembl	6	16,192,734 - 16,209,553 (+)	Ensembl

Map1s
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624908	400,765 - 408,154 (-)	NCBI

Position Markers

UniSTS:235920

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	8	70,906,328 - 70,906,407	UniSTS	GRCm38
MGSCv37	8	73,430,227 - 73,430,306	UniSTS	GRCm37
Celera	8	73,467,422 - 73,467,501	UniSTS
Cytogenetic Map	8	B3.3	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1558870	Eae36_m	experimental allergic encephalomyelitis susceptibility 36 (mouse)			Not determined		8	14723160	71045600	Mouse
1357811	Orq3_m	ovulation rate QTL 3 (mouse)			Not determined		8	32016544	71287993	Mouse
4141437	W10q14_m	weight 10 weeks QTL 14 (mouse)			Not determined			32016544	71287993	Mouse
4141172	W6q9_m	weight 6 weeks QTL 9 (mouse)			Not determined			32016544	71287993	Mouse
4140966	Egq12_m	early growth QTL 12 (mouse)			Not determined			32016544	71287993	Mouse
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32016544	117238700	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	34642776	114837007	Mouse
1301013	Capsq4_m	capsaicin sensitivity related QTL 4 (mouse)			Not determined		8	36163000	92728652	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37400000	109600000	Mouse
12904744	Carcdq1_m	cardiac collagen deposition QTL 1 (mouse)					8	39709256	94689598	Mouse
1301544	Iba3_m	induction of brown adipocytes 3 (mouse)			Not determined		8	44294880	78295025	Mouse
1301717	Adip4_m	adiposity 4 (mouse)			Not determined		8	47637030	81637146	Mouse
10766453	Char11_m	P. chabaudi malaria resistance QTL 11 (mouse)					8	47637030	81637146	Mouse
1301441	Skull11_m	skull morphology 11 (mouse)			Not determined		8	47737134	81737254	Mouse
1357715	Alaa3_m	alopecia areata 3 (mouse)			Not determined		8	48792939	82793021	Mouse
14746987	Manh64_m	mandible shape 64 (mouse)					8	50053306	84053306	Mouse
14747005	Mancz7_m	mandible centroid size 7 (mouse)					8	50053306	84053306	Mouse
14700686	Civq3_m	cerebral infarct volume QTL 3 (mouse)					8	51882191	85882191	Mouse
1301506	Aevm1_m	autoimmune extremity vasculitis in MRL mice 1 (mouse)			Not determined		8	54287817	88287993	Mouse
1301952	Im3_m	immunoregulatory 3 (mouse)			Not determined		8	54706614	88706763	Mouse
10412287	Carg3_m	Candida albicans resistance gene 3 (mouse)			Not determined		8	55545028	89545028	Mouse
11353828	Gf7_m	gonadal fat pad weight 7 (mouse)					8	58201479	92201479	Mouse
10043975	Obq31_m	obesity QTL 31 (mouse)			Not determined		8	58409776	92409776	Mouse
1301688	Orch6_m	autoimmune orchitis resistance 6 (mouse)			Not determined		8	60786850	94786976	Mouse
4141285	Tgq18_m	triglyceride QTL 18 (mouse)			Not determined			63460107	97460107	Mouse
4141797	Skmw16_m	skeletal muscle weight 16 (mouse)			Not determined		8	63939547	97939696	Mouse
1357787	Vtbt5_m	vertebral trabecular bone trait 5 (mouse)			Not determined		8	65357768	99357920	Mouse
10043992	Hbnr11_m	Heligmosomoides bakeri nematode resistance 11 (mouse)			Not determined		8	65600207	99600347	Mouse
10766466	Char12_m	P. chabaudi malaria resistance QTL 12 (mouse)					8	68269827	82600347	Mouse
1301767	Fcsa2_m	femoral cross-sectional area 2 (mouse)			Not determined		8	70305375	104305495	Mouse
4142283	Imraq2_m	immune response to AAV2 QTL 2 (mouse)			Not determined		8	70305375	104305495	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	160
Count of miRNA genes:	147
Interacting mature miRNAs:	155
Transcripts:	ENSMUST00000019405
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_173013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011242305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036154077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AA048974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC019302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK032300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK042159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK082854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK158860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK162124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK179265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK190005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK190648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK193598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK196333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK196597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK200507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK212077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK219660	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB857804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC052828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC058166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC079598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC150729	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ387862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000019405 ⟹ ENSMUSP00000019405

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,905,932 - 70,917,527 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000211880

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,905,990 - 70,911,479 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000211910 ⟹ ENSMUSP00000148822

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,905,990 - 70,911,850 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000212143

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,911,818 - 70,917,526 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000212227 ⟹ ENSMUSP00000148554

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,905,993 - 70,917,529 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000212511 ⟹ ENSMUSP00000148752

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,905,990 - 70,911,895 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000212544

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,905,987 - 70,911,954 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000212697

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,905,982 - 70,911,990 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000212823

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,906,244 - 70,908,154 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000213001 ⟹ ENSMUSP00000148773

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,906,262 - 70,912,997 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000213083

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,905,993 - 70,917,529 (+)	Ensembl

RefSeq Acc Id:

NM_173013 ⟹ NP_766601

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	71,358,618 - 71,370,173 (+)	NCBI
GRCm38	8	70,905,974 - 70,917,529 (+)	NCBI
MGSCv37	8	73,429,873 - 73,441,428 (+)	RGD
Celera	8	73,467,068 - 73,478,623 (+)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

GGGCGCTCAGAGCGTCGGGGCGGTGCGAAGATGGCGGCAGTGATGGCGGCGCCGGAGGCTGTGG
AGGCGCCCAGCTCCCTACTGTTGCTGGTGGTGGGTGGCGAGTGTGGCTGCCCCGGGCTGCTGGC
CTACGTCATGGAGGAGTTGGAACGAGGTGTTCGCTCCTGGGAGGATGTGGACCCCGCTGTCTGC
AGCCTGGATGAGCAGCTCAAGGCCTTCGTGTCCCGGCATTCAGCCACCTTCTCCAGCATTGTGA
AAGGGCAGCGGAGCCTGCACCACCGTGGAGAGACCTTGGAGACGCTGGTCCTGCTGAACCCCTC
AGACAAGTCCCTGTGTGATGAGCTCCGGAACCTCCTGATGGACCCCGCCCCTCACAAGCTGCTG
GTCCTGGCCGGGCCCTGCCTGGAGGAGACTGGGGAACTGCTGTTGCAGACTGGGGGGTTCTCGG
CCCACCACTTCCTGCAGGTGCTGGGGGACAAAGAGGTCCAGGATGCACTGGCCTCAGCACCAGC
TGCCCCAGCCCTCACTGTGTCCTGTCCAACCTTTGGGGACTGGGCACTGTTGGGCCCTGTGCCC
GGGCTGCAGCTGCGACTAAATCCGCCCGCGCAGCTGCCGGCCTCAGAGGGCCTTCGTGCCTTCC
TGGAGTATGTGGCTGAGTCGCTGGAGCCGCCATCGCCCTTCGAGTTGTTGGAGCCACCGGCTGC
GGGCGGCTTTCTGCGCTTAGCAAGGCCCTGTTGCTATGTGTTCCCGGGTGGCTTGGGAGACGCC
GCCTTCTTCGCTGTCAACGGCTTTACAGTGCTGGTGAATGGTGGCTCCAACCCCAAGTCGAGCT
TCTGGAAGCTGGTGCGCCACCTGGATCGCGTGGACGCTGTCCTTGTGACCCACGCGGGTGCTGA
CAGCTTGCCGGGCCTCAACAGCCTGCTGCGCCGCAAGCTGGCAGAGCGCGAAGCAGCCGCAGGA
CCACAGGGACAGCATGAGGAGCGGCTACGTCGCCTGCTGTCGCCTGCGCTGGGTGTGGTGTTCC
TGAATGCTCGTGAGGCTGCTTCTCGGTTGCGTGGGGGCGAAGACGAGGCTGTGTGTGCTCGGAG
CCTGCTGCGGAGCCTGGGCATTGCGCCTCTGCCACTGCAGCGTGGCCCACAGCCCTCTTGCCCC
ACTGTCCTTTTCGAGAAGCTGGGCGTAGGCCGCCTAGAGCTTTTTGTGCTGCACCCTCCTCCTG
GGGACCCTGCAGCGCCTGCCTGTGCTCTGCTCGTGTGGCAGCCAGCGGCGCCTGGCGACAAGGT
TGTGCGTGTACTATTTCCTGGCCGCACGCCGCCCGCGCGCCTGCTGGATGGGCTACAGCGCCTG
CAGCACCTGCCGTGCCTGCGCAGGCCAGTAGTTACCACGCATGACCTGGAAGCGCCCTCCAGGG
CCAACAGCCAAGACAGTCTGGCCTCGCGGGACAGTGCACGCAAGGAGCCAGTCCGTGGCACTGT
TGGCAGCATTGCCAACAGGAGTACAGTGCGAAGGGAGCCTGCCCTGGCCACTCGTGACCAGAAG
AAGGACACAAGATCTGGGCCCACTCAGCCTACTGCCCGAGACACACGCCGCTCCGGGCCTGGTG
TGGTCAACACAAAGCCTCGTGTATCACAGAATGGGCCTCGTGCCCCAGTTCTGGCAGCGCCACT
CACAGCTCCTGTGGCTGAGTGCCCTGGAGAAGCGGAGAACATCTTGGAGTCTGAGCGGCCACCT
GCCCCATCCCCAACTCTGTCCCCAGCTCAGTCCCCACCACCTACAGCACCTGGTAATAGCCCTG
AGCGCCTGTCACTCAGCCCTCTGCGCCCAGAGCCTGCCCCTGATGCGTCGCCCTCAGCCACGAC
GCCCACGCTGACCACGCCCTCTTTGCCTGCGGAGCTGGGCTCACCCCACTCAACTGAGGTGGAC
GAGTCGCTCTCTGTGTCTTTCGAGCAAGTCCTGCCAGCAGGTGACCCAGGGCTTAGCCTGCCCC
TGCGCCTCGCGCGCCGCTCCACGTCTCCTCATGATGTGGACCTGTGCCTCGTGTCACCCTGTGA
GTTCTCTCATCGCAAGCCACCCCCTCCTGCCTCCCCAGGCAGCTCGGACAGCAGTGCTCGGTCA
CAGGAGCGGCCACCTGAGACTCCACCCACGTCTGTGAGCGAGTCACTGCCCACACTATCTGACT
CTGATCCCGTGCCCGTGGCGGATTCTGATGATGACGCAGGCAGCGAGAGCGCGGCCAGGGACCC
GCCGCCTACACCTCGTGTGCCACCACCACTGCCAGATGTACCAGGAATCTGCATGGTGGACCCG
GAGGCGCTACCGCCTCGTGCCCGGCAGCCCCTCAACACCACCAATCCCAGCCGTAGCCGCAAGG
CCCCTGCAAGGCCTAGCTCTGCCTCTGCCACCCCCAGAGCTGCAACTGTAGCTGCCAAGACAAA
GGGCCCCGCGGGGGACCGGAACCGGCCACTCAGCGCCCGCAGTGAGCCTGCAGACAGGCCAGGC
CGTGTGCCCCTTACCAGGAAGCCCTCAGTCCCTAAGACCGTTCCCAAGATGGCCTCTGCCACAA
GGCTCTCCTCCGGACCCAGTGGCCGCCCTGCACCGCTTGCTGCTGGCTCCCCTGTATACCTGGA
CCTGGCCTACCTGCCTGGTGGTGGTGCCGGTCACCTGGACCAGAACTTCTTCCTGCGTGTCCGT
GCACTCTGCTATGTCATCAGTGGGCAAGGCCAGCGCCAGGAAGAGGGCCTGCGAGCTGTGCTGG
ATGCACTGCTGGCTGGCAAGCGGCAGTGGGACCTTGACTTGCAGGTCACACTGATCCCCACCTT
CGACTCTGCGGTGATGCACAGGTGGTATGAGGAGACGCATGCGCAGCACCAGGCACTGGGCATC
AGGGTGCTGGGCAGTGGCAGCCTGGTGTCCATGCAGGACGAGGCCTTCCCCGCCTGCAAGGTGG
AGTTCTAGCCCCACGCTGCAGGGCAGCCTGGGAACAACAGTTCCTCACTGTGACCCAGGTTGGT
GCTGTGGCTCCATGTGCAAAGCTAGATCCCGTGCTTAAGTGAGCCACCGTGTGACATCCCAGCT
TCCATCTCCAGCACTGAGGGTGAGAACTGCGCGCTTTATCACTTGTCCACGCCCCATCATGTGT
CAGGCACAGCTCTCTATGCCTTCTACCCTAGAACTCAGGTTGCAGAGGCAGGAGGATCTATGCA
GAGTCCAGGCCAGCCTGGGCTTCATAGTGAATCTTTGTTTCAAAAACCACAAAAAATAAAGCTG
TTGGCTGAGAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_011242305 ⟹ XP_011240607

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	71,358,634 - 71,370,173 (+)	NCBI
GRCm38	8	70,905,990 - 70,917,529 (+)	NCBI

Sequence:

show sequence

GGGGCGGTGCGAAGATGGCGGCAGTGATGGCGGCGCCGGAGGCTGTGGAGGCGCCCAGCTCCCT
ACTGTTGCTGGTGGTGGGTGGCGAGTGTGGCTGCCCCGGGCTGCTGGCCTACGTCATGGAGGAG
TTGGAACGAGGTGTTCGCTCCTGGGAGGATGTGGACCCCGCTGTCTGCAGCCTGGATGAGCAGC
TCAAGGCCTTCGTGTCCCGGCATTCAGCCACCTTCTCCAGCATTGTGAAAGCTCGTCCCTGCCC
AGTGGGTTGAGTCACCACCTACAGCTGCAGGAGGGGAAGGAAGTGTCCCTTTGGGTCGTAGTGG
CTTCCTGACCCCTGATCCATTGGAGAAAAAGCTGGAAGTGACCTACTGTGTGACCACAGCCCTC
TGGACGCCCCTTCTGGGGCAGCGGAGCCTGCACCACCGTGGAGAGACCTTGGAGACGCTGGTCC
TGCTGAACCCCTCAGACAAGTCCCTGTGTGATGAGGTAGGAGCAGGGCCCTGTGCTGTCCTCAC
TCCTGACCCAGCATATGTGCTTGACACTTCTGCACCTACTTCCTCTTGTAGACTTGGGGCAGGA
AGGCTGGTCATGGAATGCACTGATGAGCTGGAGGCAGGTGGGAGGAACCCATGGAACCCAATGT
CCTGGCTTAGCCTCTACCTGGCCCAGGCAGGAGCTGCCCTGGGTGGTAGGAGTCTTGCTTTTGG
CCAGCCTGCACCTTCCTCCCAGTCTAAGACAGCTCTGGGACTCTCTGATGCATGTCACAAATTG
ATCTGGGAATGTTGTCACAGGCCTGTTGTCCCAGCAGGAGGAGGCAGAAGCAGCTCCGGAACCT
CCTGATGGACCCCGCCCCTCACAAGCTGCTGGTCCTGGCCGGGCCCTGCCTGGAGGAGACTGGG
GAACTGCTGTTGCAGACTGGGGGGTTCTCGGCCCACCACTTCCTGCAGGTGCTGGGGGACAAAG
AGGTCCAGGATGCACTGGCCTCAGCACCAGCTGCCCCAGCCCTCACTGTGTCCTGTCCAACCTT
TGGGGACTGGGCACTGTTGGGCCCTGTGCCCGGGCTGCAGCTGCGACTAAATCCGCCCGCGCAG
CTGCCGGCCTCAGAGGGCCTTCGTGCCTTCCTGGAGTATGTGGCTGAGTCGCTGGAGCCGCCAT
CGCCCTTCGAGTTGTTGGAGCCACCGGCTGCGGGCGGCTTTCTGCGCTTAGCAAGGCCCTGTTG
CTATGTGTTCCCGGGTGGCTTGGGAGACGCCGCCTTCTTCGCTGTCAACGGCTTTACAGTGCTG
GTGAATGGTGGCTCCAACCCCAAGTCGAGCTTCTGGAAGCTGGTGCGCCACCTGGATCGCGTGG
ACGCTGTCCTTGTGACCCACGCGGGTGCTGACAGCTTGCCGGGCCTCAACAGCCTGCTGCGCCG
CAAGCTGGCAGAGCGCGAAGCAGCCGCAGGACCACAGGGACAGCATGAGGAGCGGCTACGTCGC
CTGCTGTCGCCTGCGCTGGGTGTGGTGTTCCTGAATGCTCGTGAGGCTGCTTCTCGGTTGCGTG
GGGGCGAAGACGAGGCTGTGTGTGCTCGGAGCCTGCTGCGGAGCCTGGGCATTGCGCCTCTGCC
ACTGCAGCGTGGCCCACAGCCCTCTTGCCCCACTGTCCTTTTCGAGAAGCTGGGCGTAGGCCGC
CTAGAGCTTTTTGTGCTGCACCCTCCTCCTGGGGACCCTGCAGCGCCTGCCTGTGCTCTGCTCG
TGTGGCAGCCAGCGGCGCCTGGCGACAAGGTTGTGCGTGTACTATTTCCTGGCCGCACGCCGCC
CGCGCGCCTGCTGGATGGGCTACAGCGCCTGCAGCACCTGCCGTGCCTGCGCAGGCCAGTAGTT
ACCACGCATGACCTGGAAGCGCCCTCCAGGGCCAACAGCCAAGACAGTCTGGCCTCGCGGGACA
GTGCACGCAAGGAGCCAGTCCGTGGCACTGTTGGCAGCATTGCCAACAGGAGTACAGTGCGAAG
GGAGCCTGCCCTGGCCACTCGTGACCAGAAGAAGGACACAAGATCTGGGCCCACTCAGCCTACT
GCCCGAGACACACGCCGCTCCGGGCCTGGTGTGGTCAACACAAAGCCTCGTGTATCACAGAATG
GGCCTCGTGCCCCAGTTCTGGCAGCGCCACTCACAGCTCCTGTGGCTGAGTGCCCTGGAGAAGC
GGAGAACATCTTGGAGTCTGAGCGGCCACCTGCCCCATCCCCAACTCTGTCCCCAGCTCAGTCC
CCACCACCTACAGCACCTGGTAATAGCCCTGAGCGCCTGTCACTCAGCCCTCTGCGCCCAGAGC
CTGCCCCTGATGCGTCGCCCTCAGCCACGACGCCCACGCTGACCACGCCCTCTTTGCCTGCGGA
GCTGGGCTCACCCCACTCAACTGAGGTGGACGAGTCGCTCTCTGTGTCTTTCGAGCAAGTCCTG
CCAGCAGGTGACCCAGGGCTTAGCCTGCCCCTGCGCCTCGCGCGCCGCTCCACGTCTCCTCATG
ATGTGGACCTGTGCCTCGTGTCACCCTGTGAGTTCTCTCATCGCAAGCCACCCCCTCCTGCCTC
CCCAGGCAGCTCGGACAGCAGTGCTCGGTCACAGGAGCGGCCACCTGAGACTCCACCCACGTCT
GTGAGCGAGTCACTGCCCACACTATCTGACTCTGATCCCGTGCCCGTGGCGGATTCTGATGATG
ACGCAGGCAGCGAGAGCGCGGCCAGGGACCCGCCGCCTACACCTCGTGTGCCACCACCACTGCC
AGATGTACCAGGAATCTGCATGGTGGACCCGGAGGCGCTACCGCCTCGTGCCCGGCAGCCCCTC
AACACCACCAATCCCAGCCGTAGCCGCAAGGCCCCTGCAAGGCCTAGCTCTGCCTCTGCCACCC
CCAGAGCTGCAACTGTAGCTGCCAAGACAAAGGGCCCCGCGGGGGACCGGAACCGGCCACTCAG
CGCCCGCAGTGAGCCTGCAGACAGGCCAGGCCGTGTGCCCCTTACCAGGAAGCCCTCAGTCCCT
AAGACCGTTCCCAAGATGGCCTCTGCCACAAGGCTCTCCTCCGGACCCAGTGGCCGCCCTGCAC
CGCTTGCTGCTGGCTCCCCTGTATACCTGGACCTGGCCTACCTGCCTGGTGGTGGTGCCGGTCA
CCTGGACCAGAACTTCTTCCTGCGTGTCCGTGCACTCTGCTATGTCATCAGTGGGCAAGGCCAG
CGCCAGGAAGAGGGCCTGCGAGCTGTGCTGGATGCACTGCTGGCTGGCAAGCGGCAGTGGGACC
TTGACTTGCAGGTCACACTGATCCCCACCTTCGACTCTGCGGTGATGCACAGGTGGTATGAGGA
GACGCATGCGCAGCACCAGGCACTGGGCATCAGGGTGCTGGGCAGTGGCAGCCTGGTGTCCATG
CAGGACGAGGCCTTCCCCGCCTGCAAGGTGGAGTTCTAGCCCCACGCTGCAGGGCAGCCTGGGA
ACAACAGTTCCTCACTGTGACCCAGGTTGGTGCTGTGGCTCCATGTGCAAAGCTAGATCCCGTG
CTTAAGTGAGCCACCGTGTGACATCCCAGCTTCCATCTCCAGCACTGAGGGTGAGAACTGCGCG
CTTTATCACTTGTCCACGCCCCATCATGTGTCAGGCACAGCTCTCTATGCCTTCTACCCTAGAA
CTCAGGTTGCAGAGGCAGGAGGATCTATGCAGAGTCCAGGCCAGCCTGGGCTTCATAGTGAATC
TTTGTTTCAAAAACCACAAAAAATAAAGCTGTTGGCTGAGA

hide sequence

RefSeq Acc Id:

XM_036154077 ⟹ XP_036009970

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	71,358,624 - 71,370,173 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_766601	(Get FASTA)	NCBI Sequence Viewer
	XP_011240607	(Get FASTA)	NCBI Sequence Viewer
	XP_036009970	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH52828	(Get FASTA)	NCBI Sequence Viewer
	AAI50730	(Get FASTA)	NCBI Sequence Viewer
	ABD47683	(Get FASTA)	NCBI Sequence Viewer
	BAC27800	(Get FASTA)	NCBI Sequence Viewer
	BAE36739	(Get FASTA)	NCBI Sequence Viewer
	EDL28891	(Get FASTA)	NCBI Sequence Viewer
	EDL28892	(Get FASTA)	NCBI Sequence Viewer
	Q8C052	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_766601 ⟸ NM_173013

- UniProtKB:

Q8C052 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAVMAAPEAVEAPSSLLLLVVGGECGCPGLLAYVMEELERGVRSWEDVDPAVCSLDEQLKAFV
SRHSATFSSIVKGQRSLHHRGETLETLVLLNPSDKSLCDELRNLLMDPAPHKLLVLAGPCLEET
GELLLQTGGFSAHHFLQVLGDKEVQDALASAPAAPALTVSCPTFGDWALLGPVPGLQLRLNPPA
QLPASEGLRAFLEYVAESLEPPSPFELLEPPAAGGFLRLARPCCYVFPGGLGDAAFFAVNGFTV
LVNGGSNPKSSFWKLVRHLDRVDAVLVTHAGADSLPGLNSLLRRKLAEREAAAGPQGQHEERLR
RLLSPALGVVFLNAREAASRLRGGEDEAVCARSLLRSLGIAPLPLQRGPQPSCPTVLFEKLGVG
RLELFVLHPPPGDPAAPACALLVWQPAAPGDKVVRVLFPGRTPPARLLDGLQRLQHLPCLRRPV
VTTHDLEAPSRANSQDSLASRDSARKEPVRGTVGSIANRSTVRREPALATRDQKKDTRSGPTQP
TARDTRRSGPGVVNTKPRVSQNGPRAPVLAAPLTAPVAECPGEAENILESERPPAPSPTLSPAQ
SPPPTAPGNSPERLSLSPLRPEPAPDASPSATTPTLTTPSLPAELGSPHSTEVDESLSVSFEQV
LPAGDPGLSLPLRLARRSTSPHDVDLCLVSPCEFSHRKPPPPASPGSSDSSARSQERPPETPPT
SVSESLPTLSDSDPVPVADSDDDAGSESAARDPPPTPRVPPPLPDVPGICMVDPEALPPRARQP
LNTTNPSRSRKAPARPSSASATPRAATVAAKTKGPAGDRNRPLSARSEPADRPGRVPLTRKPSV
PKTVPKMASATRLSSGPSGRPAPLAAGSPVYLDLAYLPGGGAGHLDQNFFLRVRALCYVISGQG
QRQEEGLRAVLDALLAGKRQWDLDLQVTLIPTFDSAVMHRWYEETHAQHQALGIRVLGSGSLVS
MQDEAFPACKVEF

hide sequence

RefSeq Acc Id:

XP_011240607 ⟸ XM_011242305

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSQIDLGMLSQACCPSRRRQKQLRNLLMDPAPHKLLVLAGPCLEETGELLLQTGGFSAHHFLQV
LGDKEVQDALASAPAAPALTVSCPTFGDWALLGPVPGLQLRLNPPAQLPASEGLRAFLEYVAES
LEPPSPFELLEPPAAGGFLRLARPCCYVFPGGLGDAAFFAVNGFTVLVNGGSNPKSSFWKLVRH
LDRVDAVLVTHAGADSLPGLNSLLRRKLAEREAAAGPQGQHEERLRRLLSPALGVVFLNAREAA
SRLRGGEDEAVCARSLLRSLGIAPLPLQRGPQPSCPTVLFEKLGVGRLELFVLHPPPGDPAAPA
CALLVWQPAAPGDKVVRVLFPGRTPPARLLDGLQRLQHLPCLRRPVVTTHDLEAPSRANSQDSL
ASRDSARKEPVRGTVGSIANRSTVRREPALATRDQKKDTRSGPTQPTARDTRRSGPGVVNTKPR
VSQNGPRAPVLAAPLTAPVAECPGEAENILESERPPAPSPTLSPAQSPPPTAPGNSPERLSLSP
LRPEPAPDASPSATTPTLTTPSLPAELGSPHSTEVDESLSVSFEQVLPAGDPGLSLPLRLARRS
TSPHDVDLCLVSPCEFSHRKPPPPASPGSSDSSARSQERPPETPPTSVSESLPTLSDSDPVPVA
DSDDDAGSESAARDPPPTPRVPPPLPDVPGICMVDPEALPPRARQPLNTTNPSRSRKAPARPSS
ASATPRAATVAAKTKGPAGDRNRPLSARSEPADRPGRVPLTRKPSVPKTVPKMASATRLSSGPS
GRPAPLAAGSPVYLDLAYLPGGGAGHLDQNFFLRVRALCYVISGQGQRQEEGLRAVLDALLAGK
RQWDLDLQVTLIPTFDSAVMHRWYEETHAQHQALGIRVLGSGSLVSMQDEAFPACKVEF

hide sequence

RefSeq Acc Id:

ENSMUSP00000148822 ⟸ ENSMUST00000211910

RefSeq Acc Id:

ENSMUSP00000148773 ⟸ ENSMUST00000213001

RefSeq Acc Id:

ENSMUSP00000148752 ⟸ ENSMUST00000212511

RefSeq Acc Id:

ENSMUSP00000148554 ⟸ ENSMUST00000212227

RefSeq Acc Id:

ENSMUSP00000019405 ⟸ ENSMUST00000019405

RefSeq Acc Id:	XP_036009970 ⟸ XM_036154077
- Peptide Label:	isoform X2

Promoters

RGD ID:

8667373

Promoter ID:

EPDNEW_M11717

Type:

initiation region

Name:

Map1s_1

Description:

Mus musculus microtubule-associated protein 1S , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	70,905,982 - 70,906,042	EPDNEW

RGD ID:

6843501

Promoter ID:

MM_KWN:54758

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Lung, MEF_B4, MEF_B6

Transcripts:

NM_173013

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	73,429,356 - 73,430,352 (+)	MPROMDB

RGD ID:

6848324

Promoter ID:

MM_ACW:47870

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Kidney

Transcripts:

MTAP1S.DSEP07

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	73,435,026 - 73,435,992 (+)	MPROMDB

RGD ID:

6848327

Promoter ID:

MM_ACW:47871

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Lung, Spleen

Transcripts:

MTAP1S.ESEP07, MTAP1S.HSEP07

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	73,437,621 - 73,438,592 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2443304	AgrOrtholog
Ensembl Genes	ENSMUSG00000019261	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000019405	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000148554	UniProtKB/TrEMBL
	ENSMUSP00000148752	UniProtKB/TrEMBL
	ENSMUSP00000148773	UniProtKB/TrEMBL
	ENSMUSP00000148822	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000019405	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000211910	UniProtKB/TrEMBL
	ENSMUST00000212227	UniProtKB/TrEMBL
	ENSMUST00000212511	UniProtKB/TrEMBL
	ENSMUST00000213001	UniProtKB/TrEMBL
InterPro	MAP1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MAP1S	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RibonucZ/Hydroxyglut_hydro	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:270058	UniProtKB/Swiss-Prot
MGD	MGI:2443304	ENTREZGENE
NCBI Gene	270058	ENTREZGENE
PANTHER	PTHR13843	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR13843:SF11	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Map1s	PhenoGen
Superfamily-SCOP	SSF56281	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene	Mm.248559	ENTREZGENE
UniProt	A0A1D5RLY6_MOUSE	UniProtKB/TrEMBL
	A0A1D5RMF1_MOUSE	UniProtKB/TrEMBL
	A0A1D5RMG7_MOUSE	UniProtKB/TrEMBL
	A0A1D5RML0_MOUSE	UniProtKB/TrEMBL
	B2RWW1_MOUSE	UniProtKB/TrEMBL
	MAP1S_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	E9QKR8	UniProtKB/Swiss-Prot
	Q3TSD6	UniProtKB/Swiss-Prot
	Q7TMW8	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-12-25	Map1s	microtubule-associated protein 1S	Mtap1s		Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)