| Gene: Gm19744 (predicted gene, 19744) Mus musculus |
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Analyze |
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| Symbol: |
Gm19744 |
| Name: |
predicted gene, 19744 |
| RGD ID: |
11083792 |
| MGI Page |
MGI |
| Description: |
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| Type: |
ncrna (Ensembl: lncRNA)
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| RefSeq Status: |
MODEL |
| Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 49,296,920 - 49,326,617 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 49,296,512 - 49,323,573 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 48,843,885 - 48,873,582 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 48,843,665 - 48,869,901 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 49,940,771 - 49,955,335 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | Celera | 8 | 51,525,449 - 51,540,003 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | B1.2 | NCBI | | | | | cM Map | 8 | 27.24 | NCBI | | | | |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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References
Additional References at PubMed
Genomics
QTLs in Region (GRCm39)
| 1558870 | Eae36_m | experimental allergic encephalomyelitis susceptibility 36 (mouse) | | | Not determined | | 8 | 14773160 | 71498244 | Mouse | | 1301088 | Alcw6_m | alcohol withdrawal 6 (mouse) | | | Not determined | | 8 | 15506572 | 49506729 | Mouse | | 1300912 | Daq19_m | directional asymmetry QTL 19 (mouse) | | | Not determined | | 8 | 15506572 | 49506729 | Mouse | | 1301298 | Pgia4_m | proteoglycan induced arthritis 4 (mouse) | | | Not determined | | 8 | 16569373 | 50569697 | Mouse | | 1301550 | Fembrs2_m | femur breaking strength 2 (mouse) | | | Not determined | | 8 | 18321097 | 52321225 | Mouse | | 1301160 | Eae14_m | susceptibility to experimental allergic encephalomyelitis 14 (mouse) | | | Not determined | | 8 | 19455018 | 53455150 | Mouse | | 1300603 | Cd8ts2_m | CD8 T cell subset 2 (mouse) | | | Not determined | | 8 | 19455018 | 53455150 | Mouse | | 10043974 | Obq30_m | obesity QTL 30 (mouse) | | | Not determined | | 8 | 26583322 | 60583322 | Mouse | | 1357811 | Orq3_m | ovulation rate QTL 3 (mouse) | | | Not determined | | 8 | 32506572 | 71740637 | Mouse | | 4140966 | Egq12_m | early growth QTL 12 (mouse) | | | Not determined | | | 32506572 | 71740637 | Mouse | | 4141437 | W10q14_m | weight 10 weeks QTL 14 (mouse) | | | Not determined | | | 32506572 | 71740637 | Mouse | | 4141172 | W6q9_m | weight 6 weeks QTL 9 (mouse) | | | Not determined | | | 32506572 | 71740637 | Mouse | | 4140967 | Bmd39_m | bone mineral density 39 (mouse) | | | Not determined | | 8 | 32506572 | 117965439 | Mouse | | 10043990 | Hbnr12_m | Heligmosomoides bakeri nematode resistance 12 (mouse) | | | Not determined | | 8 | 33277016 | 51290537 | Mouse | | 1301936 | Trigq2_m | triglyceride QTL 2 (mouse) | | | Not determined | | 8 | 34290397 | 68290537 | Mouse | | 1558875 | Eae31_m | experimental allergic encephalomyelitis susceptibility 31 (mouse) | | | Not determined | | 8 | 35109930 | 115563747 | Mouse | | 11041902 | Lmr10a_m | leishmaniasis resistance 10a (mouse) | | | | | 8 | 35321097 | 57797633 | Mouse | | 11049578 | Lmr10c_m | leishmaniasis resistance 10c (mouse) | | | | | 8 | 35321097 | 57797633 | Mouse | | 11049577 | Lmr10b_m | leishmaniasis resistance 10b (mouse) | | | | | 8 | 35321097 | 57797633 | Mouse | | 1301139 | Lmr10_m | leishmaniasis resistance 10 (mouse) | | | Not determined | | 8 | 35321097 | 57797633 | Mouse | | 1301013 | Capsq4_m | capsaicin sensitivity related QTL 4 (mouse) | | | Not determined | | 8 | 36630154 | 93455280 | Mouse | | 27226754 | Femd6_m | femur midshaft diameter 6, 10 week (mouse) | | | | | 8 | 37867154 | 110326632 | Mouse | | 12904744 | Carcdq1_m | cardiac collagen deposition QTL 1 (mouse) | | | | | 8 | 40162297 | 95416226 | Mouse | | 1301544 | Iba3_m | induction of brown adipocytes 3 (mouse) | | | Not determined | | 8 | 44747914 | 78748059 | Mouse | | 10766453 | Char11_m | P. chabaudi malaria resistance QTL 11 (mouse) | | | | | 8 | 48090064 | 82090180 | Mouse | | 1301717 | Adip4_m | adiposity 4 (mouse) | | | Not determined | | 8 | 48090064 | 82090180 | Mouse | | 1301441 | Skull11_m | skull morphology 11 (mouse) | | | Not determined | | 8 | 48190168 | 82190288 | Mouse | | 1357715 | Alaa3_m | alopecia areata 3 (mouse) | | | Not determined | | 8 | 49245591 | 83245673 | Mouse | |
Expression
Sequence
| RefSeq Acc Id: |
ENSMUST00000185458 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
|---|
GRCm39 Ensembl | 8 | 49,297,076 - 49,297,549 (+) | Ensembl | GRCm38.p6 Ensembl | 8 | 48,844,041 - 48,844,514 (+) | Ensembl |
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| RefSeq Acc Id: |
ENSMUST00000186135 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 8 | 49,296,832 - 49,298,144 (+) | Ensembl | GRCm38.p6 Ensembl | 8 | 48,843,797 - 48,845,109 (+) | Ensembl |
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| RefSeq Acc Id: |
ENSMUST00000187946 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
|---|
GRCm39 Ensembl | 8 | 49,296,512 - 49,323,532 (+) | Ensembl | GRCm38.p6 Ensembl | 8 | 48,843,665 - 48,869,016 (+) | Ensembl |
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| RefSeq Acc Id: |
ENSMUST00000188936 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 8 | 49,308,452 - 49,322,936 (+) | Ensembl | GRCm38.p6 Ensembl | 8 | 48,855,417 - 48,869,901 (+) | Ensembl |
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| RefSeq Acc Id: |
ENSMUST00000189912 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 8 | 49,297,138 - 49,297,643 (+) | Ensembl | GRCm38.p6 Ensembl | 8 | 48,844,103 - 48,844,608 (+) | Ensembl |
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| RefSeq Acc Id: |
ENSMUST00000190967 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
|---|
GRCm39 Ensembl | 8 | 49,296,541 - 49,323,020 (+) | Ensembl | GRCm38.p6 Ensembl | 8 | 48,843,722 - 48,847,486 (+) | Ensembl |
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| RefSeq Acc Id: |
ENSMUST00000245745 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
|---|
GRCm39 Ensembl | 8 | 49,296,528 - 49,323,573 (+) | Ensembl |
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| RefSeq Acc Id: |
ENSMUST00000245775 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 8 | 49,296,554 - 49,322,977 (+) | Ensembl |
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| RefSeq Acc Id: |
ENSMUST00000246074 |
| Type: |
CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 8 | 49,296,558 - 49,322,836 (+) | Ensembl |
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| RefSeq Acc Id: |
XR_379026 |
| Type: |
NON-CODING |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source |
|---|
GRCm39 | 8 | 49,296,920 - 49,326,617 (+) | NCBI | GRCm38 | 8 | 48,843,885 - 48,873,582 (+) | NCBI |
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| Sequence: |
ATGACAGGGGTCTGCCGGCCGCTGATTGCAAACACTAATGAACTTACAGCACCATTTGAAATTC
ACACGCACCAACAAAGTGAGGGGATTATTAGCAGCACAACACCGCCCCTGCCACACTCCCTTGG
CAGTGGGAGCCGAAACAACTTTACCTCCCTAAGGACACTGCCACTTTGTAAGTTTCTGCCAAAA
CTCTACTCCGGGAAGCTCCAGCCCCGGGCTCCGCCCCCGCCCCCACCCTCACCCCTAGCTGCGG
AAAGCCCACCCGGGGAGCCATTTTTCACTGCCCAAAAGCTCCTGCCCTTTGAGTTTTGGAACTC
CAAACTTAGAACCTTTACAGAATCGCGCTCTGGCTTCCTGCCTCCAGCCACCTCCAGGCTTCTT
TCTGTCCGCTGGAGGGACTGGGTCCAACGCCCTGGAGAGAACCACTGCACCAATGAGAGTCTAG
CTCCTCGAGGAGCGCCCAGCCACAAAGACCTGACTGTCAGGCTCAGACTGAGTTTCTGCAGCTC
TGTCACCTCTTCCACTAAAGGGATTCCAGACACTGAAGAGCTGGCAGACATGACATTGACAGCT
ATAGTTCAGACACTAGAGCAACCAACCCGTCTTTTGAAAAGCTCAGGAGTTAAGGAAGGCAATA
AGAATAGAGGAGGCATGAACACACAAGAACTTGGGAAGAGAGGAATGTGAGCTGTGAAAAACCA
AGCAGAAGTGTTTCCATCTCAATGGCACTATGAGCTGGAGAAGTCATAGGAAACCAAAGCACTC
AAGAGGAGACACAGCTATCAAGAACTCCTGTCCACCGGGCATTGGTGGAAGGAGATGAAGCCAT
TTTTACCAACCTGAACCTTTTTTCCGTGGGGCACTATACAGCTTAACCTATGAACTCTGTCGAG
CCGTTGAGGGCTCCTAAACAATTTCTTAGCACGGAGTTCCTCTTTTCAGCAAACCCTGCTTCTC
ACTGAGTACAGAGTCGAAGCAATCCTACAGCACTAACATTTCAATTGTTGCATATGGAGCCCAG
TACATAAAGGACTCCCCAAAGAGAGCGGTTTATAACTGGATTATAGCTGCTCCACACATTTAAC
TTTCCATGAATAGTTTCTGACGTTTTGAAGCACCCCAAGTCATAACTTTTCTATCCACGCATGT
AGGAAAGCAGTCACTGATTGTGCGTTTCTTCATTGACCAGAATACAAACATGGATGAGACTGTT
AGCACCCATGGTATCTGAGGGAGAACTTACAGAATTTGTTTACCTATGTTATATATAAGACAAT
AGATTGTATATACAAATATAGAAAACATTTCACTTGTTTGTATGTGCACTATATGTATTTTGAG
TGCAGATCAAGTATGTAATGGTCCCACTTATTATTAGTTTCATTTTTTTACAATTTCATAACTG
TGGCCTAAAAATAGTAGGTGGAAAATTTTAGAAGCAATCCACACATATGTGTTAAATTACACGA
CATTTTGAGTACCGGGATAAATTCTCATTCTGTATTGCTTCTTCTTGCCCAAAATATAACTCAT
TTCTCTGGTCAGTGCATCTGCTCTGTATATCTTGCCTGCTACCTCCATGATCAGAACCATTTAG
GAACAGTGTAGGGTCTGTATTCAAATCAACCTGTTATGCTTAGCAGTGTCTCAGTCATGATACT
GAAAACTGAATATGTTAGAGAAAAATTGGCTAGTGTCTTCTTCAAGTGAAATGTAAAGGTCTCC
ACTTGAGGGGGGTTTTATAGAGCTATCATGTTGTTAAATCATATACTAGGCATGTTTTATAAAT
TAACCTATGTTATAGATATGTATGTACAAGAGAAAAGCATGGTGCATATAGGGGCTGGTATTAT
TTGTGATTTCTGATATTCACTGTATTCTTGGAACACAGAATTGTATACCATTGGCTTTCCCCAA
CCCTAATGTTGTATGTTTAATGGAGACTTTGTTCTGTGACTATTAATCAAGTTCTGAACTCTAC
CAAGGAAGCACACACTTATATACACTTTCCTTACTAAGAAAATGTTTCTCATTTGTTCAATCCA
TTTACAGATGGAGCTTCATGGTATGGGTATCTGTGGTGTGGCCAAAGAAAAATAAGGCAAGAAG
AGGGAGAAAGAGGTTCTGGTTTATTATGGGTGCTATAAGTAGATGCCCAAAATTCCCAATGGAA
AAAATGCCCCCAGGCACACCACTCATGGCGACTTCCAAAGTTTGTTCTCAGTAACTGCATTCAC
ACAATACATAATTTTAACAGATCCATTTATGGCTTTGAAATGTGAAGTGTCCAATGAAGAGAAG
AAATACTTAAAAGAGGAAAACTGGAAAATATTAAGAGCTGGACGGAGTTACTGAAAAACAGCCA
GGTAGTGTGACTTTAGTTAATATAAAGGGCAAATGTCTGGCCATCTTTCAGTATTTGCAAGAGC
TCTACTCATTAAGATGTATAAGGATGGTTTTGAATCATTAGGAAAAGGTGAAGTTATGTGTCTA
TCTTAGCATATTCTGGGAAAAAAATTAAAACAGTTCCATTTAGATTGAGTTCCATCAAAATCAT
TAAAGTTAGTAAGAGTGAATCCTCAAGTTTTTAAGGCATGCAAATTTCCTTCTCTTTCCCTCTT
TCTCCCTCCCTCTCTTTCTCCTCTCTCATCTTTGCTCTATCCTGTCTTCTTTCTCATTCCTGCC
CCACCACATGCATATTGCATTTGTGCATAATACTTATTTAGTGTTTGGTTTTGATGTTACTGGC
GAGGTGGACTTATATTTAAGGAAACACTGTTGCAGAACAATTTAAGTACTTGGAAATGATCTTA
CATTTTCATTTCTCATATAGAAAAAATATGCTAGTATATATTCATTATTCATTTAAGTTCGGTC
AACTCTCAATTATCTCTGGTAATAGAGAGTAGGGATAAAATGAGCAGGTGAAATCTATTTCTAG
TCCCCAAATACAACTTGCAGTCTCTTCCTCCTTCCTTCTTCACTAGAAGCAGAGCTATGTCTCT
TTCCTTTTGTTTGTGGACTCCTTTCAACTGTTGAATGACCTTAAGAAAAACAACCCAAGGTAGG
GGGAAAAAACCCAAACACAAGGATGATCTCAAATCCTTTCTAAAATTAAGACAGCAAACATAAT
CTATAAGAGCTAATTTTTAAAAAGCTGGGCTGCTTTTTCAAACATTGTGTCTGAAACAGTGTGT
CACTACCAGAGAAGAGTAGAACGCCCTTCATTAAATGATGCTATTTTTGAAAGGCATTCATCCA
TTTAGGAGACAGTTTCTTCTCATTGCAAATGTGTTTTAACTTTCAGAATAGCAGTTGGATGTTT
AAACATAATAGCTTTATATATTTTATAATTTACAGAGGAGGACAAATAAGCACTGGCTTAATAA
AATCATTAACTATAGAATTAAGAACATTTCAAGCATGACCTCCAGACAGCTAGCATCAGGCTAG
GTTTCCTAGCTGTTCCCTAACTAGCAATAGTATTGACTTTTTAAAAGTAAGAGTGAATGGAATT
TATCCAAGGAAGAATCAATATGAAGCTGAAACTCCAAGGTCTTAACAGCTAATCTTGAAGAACA
TCACTCAGAGGAGAGATTAGTATGGCAATGAACATACAACCAAAAATGTAAAGGATGAAATAAC
TGCATAAAACTCATATAGCCTAATCTGTGTACAGTGTTGATACCTGGCAATTAATAAACACAAG
AGAGTGGATATTCATGTTACTGTCCTTGCCCCAGTGGGAAATCCGCATTAAACAAAGAAAACAA
GATCCTCACAGACACAGAGGAAAAGGACACTATAATTTTATACACATTGTTCTGAGCGATGTCA
ATAACCATTGATTACTTTTCTTTGTGAAGACCCAAATAGAATCCTGTAAACTGGCCTCATCTTT
GATGATACAAAAGGTCAGAATATTTCAAAACATTATCAGAGATGTTGTTTTCTTGTTCTTTTTC
AAACTCATCTGAGGAGTCTGATCTGATGAGTATTGTGTAGGGAAACTCGTTGTCTCCCATAAAG
TAACAAGAGTAGGGAAGAGGGACCAGACACAAATGCGGTTCTGAGAAACAGTGTCCCAGAGGAG
GACAAGAACACCCCTCCAGAGTGCATGGTGATAAACACCTCTGTGGTCATGTTTGTTGTGTGAC
ACTATTCTTGAACAATTTCTATTTACAATTTCTATTGGTGAATGTATAATTTATATACCTATTT
ATATTATATCATTTGTATATAATATAGATAATGTCCATTTATATCATCCATATATAATACAGAT
GATATCTATTTATATTATATAATTTATATGTAACAGAAATATACTATCTATTTGTAAATGTGTA
ATATATATTGAACAATATCAATTTACCCTAGGTAGCATACCAACAACAGAGCAAATTAAAGCTA
TCATCAGAGTTTGATTGAGGTTACTTATAGAAATCTGGATGGGGAGCAGAAATGACTCAAAGAC
ATCTGCATCACTAAATGGCCACCCCAGAGTAGATGATGGATCATCAATTCTAGAAACCTATAGC
TTACTACACAGCCTTCATGAAGTTCAACATGTTTAAGAGAGACCTTTCCCTGTGGTTCTGTTAC
TCTGAACCTCTTCTAGGCTTCATGAATGGCATAAGAGTCTTCTAGACGTTCAGCTGTTTCTACT
TCTTCCAGGTGGCTTGGGTGGTTGAAACTTGGGTGGTTGTTTGAATATATCTCTTAGCAGACCT
AATTGCTTATAGAAACTTAGGGAGTCAGGAGCCTAGTGTATCTGGTCAGTTTCAGGGAATTCCT
GAAACCTTTGAGTTGTTTACCCAGCTTCCTGCAGGATGGAGTGTTTCCTTTACCTCTGAAAACA
TCCTATGTCTTAAAGATCTTCCCTCCAAGATGAACATTTTCATCTGGGTGGAAATTACTACACA
GTAATATTAACTAAGAAAAATGGTATCTGGAAGAAAGGAGAAATTTTTAGTAAGTATAAGAAGT
ATAAAAATAGAAGAAAGAAAAATAGATATGAGTCCATTGTGGTATCTTTTTGAGATACTTCTCA
AGGGCTTATGTGTGAAAGGCTTGCTTGCCTACTAATGGGCTTTGAAGTTGTTACTGGATTGTGA
GGGCTTTACTGCCATCAATGAAGTCAACTTTGATGACTTTGCAAGCTAACAGCCTTACCAGGAG
GGGATTGAGTATTTCAGAGATGGAGTCTAGTTGGAAAAAGTATATCACTAGGAACATGTTGTTA
GACATTATTTTCCATGCCTTCCTATTCTCTCTGTGTGTATAAGATGAACATCTTTCCTTTACCA
CCCCTGATGCCATAATCTTCTATCTCAACTATCTATTTCAGCACATGGTAGGCCCTTAGCAATG
GAGCCTTAACCACGGGTTAAAATTGCTGAAACCATGAGCTCAAATAATATTTTCTTCATTAAAC
TGTTTATCTCAGGCCTTTGTTACCATGATGAAAAGTCAAATACATGACTTGATATGGAGTGTGA
GCATTATCTAGTTCTATAGTTGGAAATTTTTGAATTGAGAAAACATGTTACCCGTGGTCCATGC
AAGAGTATTTAAATCCAAGAAGATGAATGGAATAAAAGATTCACTCTGTTTACAA
hide sequence
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Promoters
| RGD ID: | 15093443 |
| Promoter ID: | EPDNEWNC_M1347 |
| Type: | single initiation site |
| Name: | Gm19744_1 |
| Description: | predicted gene, 19744 [Source:MGI Symbol;Acc:MGI:5011929] |
| SO ACC ID: | SO:0000170 |
| Source: | EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/) |
| Experiment Methods: | Single-end sequencing. |
| Position: | | Mouse Assembly | Chr | Position (strand) | Source |
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GRCm38 | 8 | 48,844,140 - 48,844,200 | EPDNEWNC |
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Additional Information
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