Nwd1 (NACHT and WD repeat domain containing 1) - Rat Genome Database
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Gene: Nwd1 (NACHT and WD repeat domain containing 1) Mus musculus
Analyze
Symbol: Nwd1
Name: NACHT and WD repeat domain containing 1
RGD ID: 1615572
MGI Page MGI
Description: Predicted to have ATP binding activity. Predicted to be involved in negative regulation of NF-kappaB transcription factor activity and positive regulation of gene expression. Predicted to localize to cytosol. Is expressed in brain and spinal cord ventricular layer. Orthologous to human NWD1 (NACHT and WD repeat domain containing 1); INTERACTS WITH 1,2-dichloroethane; 4-hydroxyphenyl retinamide; dibutyl phthalate.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A230063L24Rik; NACHT and WD repeat domain-containing protein 1; NACHT domain- and WD repeat-containing protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39873,372,865 - 73,443,508 (+)NCBIGRCm39mm39
GRCm38872,646,225 - 72,716,880 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl872,646,711 - 72,717,876 (+)EnsemblGRCm38mm10GRCm38
MGSCv37875,170,610 - 75,238,645 (+)NCBIGRCm37mm9NCBIm37
MGSCv36875,540,415 - 75,604,144 (+)NCBImm8
Celera876,962,656 - 77,030,120 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (ISO)
nucleolus  (ISO)

Molecular Function

References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073   PMID:21267068   PMID:30004576  


Genomics

Comparative Map Data
Nwd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39873,372,865 - 73,443,508 (+)NCBIGRCm39mm39
GRCm38872,646,225 - 72,716,880 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl872,646,711 - 72,717,876 (+)EnsemblGRCm38mm10GRCm38
MGSCv37875,170,610 - 75,238,645 (+)NCBIGRCm37mm9NCBIm37
MGSCv36875,540,415 - 75,604,144 (+)NCBImm8
Celera876,962,656 - 77,030,120 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
NWD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1916,719,975 - 16,817,963 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1916,719,847 - 16,817,963 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1916,719,976 - 16,817,963 (+)EnsemblGRCh38hg38GRCh38
GRCh381916,719,526 - 16,817,963 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371916,830,787 - 16,928,774 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361916,691,787 - 16,789,764 (+)NCBINCBI36hg18NCBI36
Celera1916,732,646 - 16,830,313 (+)NCBI
Cytogenetic Map19p13.11NCBI
HuRef1916,399,721 - 16,497,684 (+)NCBIHuRef
CHM1_11916,830,805 - 16,928,529 (+)NCBICHM1_1
Nwd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01618,875,768 - 18,944,775 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1618,877,257 - 18,937,562 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01618,740,763 - 18,803,402 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1617,396,593 - 17,464,531 (-)NCBICelera
Cytogenetic Map16p14NCBI
Nwd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555241,084,750 - 1,121,689 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555241,083,237 - 1,122,615 (-)NCBIChiLan1.0ChiLan1.0
NWD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11917,189,728 - 17,283,045 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1917,202,805 - 17,281,335 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01916,209,324 - 16,305,897 (+)NCBIMhudiblu_PPA_v0panPan3
NWD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2045,794,306 - 45,852,100 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12045,792,745 - 45,854,889 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Nwd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365963,882,259 - 3,948,664 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NWD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl260,800,411 - 60,960,469 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1260,800,064 - 60,906,536 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2260,406,949 - 60,494,692 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NWD1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1615,255,116 - 15,318,589 (+)NCBI
ChlSab1.1 Ensembl615,221,120 - 15,318,470 (+)Ensembl
Nwd1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624908797,891 - 830,857 (-)NCBI

Position Markers
AI413399  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38872,586,987 - 72,587,150UniSTSGRCm38
MGSCv37875,110,886 - 75,111,049UniSTSGRCm37
Celera876,933,310 - 76,933,473UniSTS
Cytogenetic Map8B3.3UniSTS
Whitehead/MRC_RH8772.05UniSTS
UniSTS:235927  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38872,572,579 - 72,572,787UniSTSGRCm38
MGSCv37875,096,478 - 75,096,686UniSTSGRCm37
Celera876,918,917 - 76,919,125UniSTS
Cytogenetic Map8B3.3UniSTS
BF386951  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38872,711,726 - 72,711,884UniSTSGRCm38
MGSCv37875,235,625 - 75,235,783UniSTSGRCm37
Celera877,027,100 - 77,027,258UniSTS
Cytogenetic Map8B3.3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:6208
Count of miRNA genes:913
Interacting mature miRNAs:1305
Transcripts:ENSMUST00000093427, ENSMUST00000160443, ENSMUST00000160912, ENSMUST00000161254, ENSMUST00000161386, ENSMUST00000161557, ENSMUST00000162248, ENSMUST00000163026
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_176940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC171917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC082552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY731616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000093427   ⟹   ENSMUSP00000091135
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,646,711 - 72,714,738 (+)Ensembl
RefSeq Acc Id: ENSMUST00000160443   ⟹   ENSMUSP00000124446
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,653,486 - 72,708,072 (+)Ensembl
RefSeq Acc Id: ENSMUST00000160912
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,657,086 - 72,708,033 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161254   ⟹   ENSMUSP00000124804
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,646,771 - 72,717,876 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161386
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,646,711 - 72,693,713 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161557   ⟹   ENSMUSP00000125470
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,646,722 - 72,708,002 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162248
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,681,791 - 72,693,110 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163026
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,657,086 - 72,708,033 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228312   ⟹   ENSMUSP00000154488
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl872,650,294 - 72,717,876 (+)Ensembl
RefSeq Acc Id: NM_176940   ⟹   NP_795914
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,373,339 - 73,441,374 (+)NCBI
GRCm38872,646,711 - 72,714,746 (+)NCBI
MGSCv37875,170,610 - 75,238,645 (+)RGD
Celera876,962,656 - 77,030,120 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006531086   ⟹   XP_006531149
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,869 - 73,443,508 (+)NCBI
GRCm38872,646,228 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006531087   ⟹   XP_006531150
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,869 - 73,443,508 (+)NCBI
GRCm38872,646,228 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006531088   ⟹   XP_006531151
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,869 - 73,443,508 (+)NCBI
GRCm38872,646,229 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006531089   ⟹   XP_006531152
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,383,738 - 73,443,508 (+)NCBI
GRCm38872,657,102 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243605   ⟹   XP_030099465
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,869 - 73,443,508 (+)NCBI
GRCm38872,646,229 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243606   ⟹   XP_030099466
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,870 - 73,443,508 (+)NCBI
GRCm38872,646,229 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243607   ⟹   XP_030099467
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,870 - 73,443,508 (+)NCBI
GRCm38872,646,229 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154089   ⟹   XP_036009982
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,869 - 73,443,508 (+)NCBI
RefSeq Acc Id: XM_036154090   ⟹   XP_036009983
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,869 - 73,443,508 (+)NCBI
RefSeq Acc Id: XM_036154091   ⟹   XP_036009984
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,865 - 73,419,011 (+)NCBI
RefSeq Acc Id: XM_036154092   ⟹   XP_036009985
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,866 - 73,419,011 (+)NCBI
RefSeq Acc Id: XR_003947304
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,866 - 73,443,508 (+)NCBI
GRCm38872,646,225 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003947305
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,867 - 73,443,508 (+)NCBI
GRCm38872,646,225 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003947306
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,867 - 73,443,508 (+)NCBI
GRCm38872,646,225 - 72,716,880 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004934841
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39873,372,866 - 73,443,508 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_795914   ⟸   NM_176940
- UniProtKB: E0CX99 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006531149   ⟸   XM_006531086
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006531150   ⟸   XM_006531087
- Peptide Label: isoform X2
- UniProtKB: A6H603 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006531151   ⟸   XM_006531088
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006531152   ⟸   XM_006531089
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_030099465   ⟸   XM_030243605
- Peptide Label: isoform X5
RefSeq Acc Id: XP_030099467   ⟸   XM_030243607
- Peptide Label: isoform X7
RefSeq Acc Id: XP_030099466   ⟸   XM_030243606
- Peptide Label: isoform X7
RefSeq Acc Id: ENSMUSP00000091135   ⟸   ENSMUST00000093427
RefSeq Acc Id: ENSMUSP00000154488   ⟸   ENSMUST00000228312
RefSeq Acc Id: ENSMUSP00000124446   ⟸   ENSMUST00000160443
RefSeq Acc Id: ENSMUSP00000124804   ⟸   ENSMUST00000161254
RefSeq Acc Id: ENSMUSP00000125470   ⟸   ENSMUST00000161557
RefSeq Acc Id: XP_036009984   ⟸   XM_036154091
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036009985   ⟸   XM_036154092
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036009982   ⟸   XM_036154089
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036009983   ⟸   XM_036154090
- Peptide Label: isoform X4
Protein Domains
NACHT   WD_REPEATS_REGION

Promoters
RGD ID:8667487
Promoter ID:EPDNEW_M11775
Type:initiation region
Name:Nwd1_1
Description:Mus musculus NACHT and WD repeat domain containing 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38872,646,718 - 72,646,778EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442268 AgrOrtholog
Ensembl Genes ENSMUSG00000048148 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000091135 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000124446 UniProtKB/TrEMBL
  ENSMUSP00000124804 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000125470 UniProtKB/TrEMBL
  ENSMUSP00000154488 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000093427 UniProtKB/Swiss-Prot
  ENSMUST00000160443 UniProtKB/TrEMBL
  ENSMUST00000161254 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000161557 UniProtKB/TrEMBL
  ENSMUST00000228312 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Apc4_WD40_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4062 UniProtKB/TrEMBL
  G-protein_beta_WD-40_rep UniProtKB/TrEMBL
  NACHT_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NWD1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Quinonprotein_ADH-like_supfam UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:319555 UniProtKB/TrEMBL
MGD MGI:2442268 ENTREZGENE
NCBI Gene 319555 ENTREZGENE
PANTHER PTHR45013 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ANAPC4_WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4062 UniProtKB/TrEMBL
  NACHT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Nwd1 PhenoGen
PRINTS GPROTEINBRPT UniProtKB/TrEMBL
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50998 UniProtKB/TrEMBL
  SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.390076 ENTREZGENE
UniProt A0A2I3BR96_MOUSE UniProtKB/TrEMBL
  A6H603 ENTREZGENE
  B7ZMT4_MOUSE UniProtKB/TrEMBL
  E0CX99 ENTREZGENE, UniProtKB/TrEMBL
  E0CY71_MOUSE UniProtKB/TrEMBL
  NWD1_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q3TRC9 UniProtKB/Swiss-Prot
  Q8BS99 UniProtKB/Swiss-Prot