Galnt7 (polypeptide N-acetylgalactosaminyltransferase 7) - Rat Genome Database

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Gene: Galnt7 (polypeptide N-acetylgalactosaminyltransferase 7) Mus musculus
Analyze
Symbol: Galnt7
Name: polypeptide N-acetylgalactosaminyltransferase 7
RGD ID: 731861
MGI Page MGI
Description: Enables polypeptide N-acetylgalactosaminyltransferase activity. Acts upstream of or within protein O-linked glycosylation. Predicted to be located in Golgi membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including alimentary system; brain; respiratory system; sensory organ; and urinary system. Orthologous to human GALNT7 (polypeptide N-acetylgalactosaminyltransferase 7).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI225872; galNAc-T7; N-acetylgalactosaminyltransferase 7; polypeptide GalNAc transferase 7; pp-GaNTase 7; ppGaNTase-T7; protein-UDP acetylgalactosaminyltransferase 7; UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 7; UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39857,976,859 - 58,106,089 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl857,976,862 - 58,106,066 (-)EnsemblGRCm39 Ensembl
GRCm38857,523,825 - 57,653,055 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl857,523,828 - 57,653,032 (-)EnsemblGRCm38mm10GRCm38
MGSCv37860,002,622 - 60,131,852 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36860,416,711 - 60,545,145 (-)NCBIMGSCv36mm8
Celera860,162,978 - 60,223,437 (-)NCBICelera
Cytogenetic Map8B2NCBI
cM Map829.92NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Galnt7MouseNeurodevelopmental Disorders  ISORGD:13479528554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868

1 to 20 of 86 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Galnt7Mouse1,2-dimethylhydrazine affects expressionEXP 64804641,2-Dimethylhydrazine affects the expression of GALNT7 mRNACTDPMID:22206623
Galnt7Mouse17beta-estradiol multiple interactionsISORGD:6203626480464[bisphenol A co-treated with Estradiol] results in increased expression of GALNT7 mRNACTDPMID:26496021
Galnt7Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with AHR gene mutant form] results in decreased expression of GALNT7 mRNACTDPMID:19465110
Galnt7Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:6203626480464Tetrachlorodibenzodioxin results in decreased expression of GALNT7 mRNACTDPMID:33387578
Galnt7Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:6203626480464Tetrachlorodibenzodioxin results in increased expression of GALNT7 mRNACTDPMID:34747641
Galnt7Mouse3-methylcholanthrene increases expressionEXP 6480464Methylcholanthrene results in increased expression of GALNT7 mRNACTDPMID:20713471
Galnt7Mouse4,4'-diaminodiphenylmethane affects expressionEXP 64804644,4'-diaminodiphenylmethane affects the expression of GALNT7 mRNACTDPMID:18648102
Galnt7Mouse4-hydroxyphenyl retinamide increases expressionEXP 6480464Fenretinide results in increased expression of GALNT7 mRNACTDPMID:28973697
Galnt7Mouseacetamide increases expressionISORGD:6203626480464acetamide results in increased expression of GALNT7 mRNACTDPMID:31881176
Galnt7Mouseacrylamide increases expressionISORGD:6203626480464Acrylamide results in increased expression of GALNT7 mRNACTDPMID:28959563
Galnt7Mouseaflatoxin B1 affects expressionISORGD:13479526480464Aflatoxin B1 affects the expression of GALNT7 proteinCTDPMID:20106945
Galnt7Mouseaflatoxin B1 increases expressionISORGD:13479526480464Aflatoxin B1 results in increased expression of GALNT7 mRNACTDPMID:27153756
Galnt7Mouseaflatoxin B1 decreases expressionEXP 6480464Aflatoxin B1 results in decreased expression of GALNT7 mRNACTDPMID:19770486
Galnt7Mouseammonium chloride affects expressionISORGD:6203626480464Ammonium Chloride affects the expression of GALNT7 mRNACTDPMID:16483693
Galnt7Mouseamphetamine decreases expressionISORGD:6203626480464Amphetamine results in decreased expression of GALNT7 mRNACTDPMID:30779732
Galnt7Mousearistolochic acid A decreases expressionISORGD:13479526480464aristolochic acid I results in decreased expression of GALNT7 mRNACTDPMID:33212167
Galnt7Mousearsane affects methylationISORGD:13479526480464Arsenic affects the methylation of GALNT7 geneCTDPMID:25304211
Galnt7Mousearsane multiple interactionsISORGD:13479526480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
Galnt7Mousearsenic atom affects methylationISORGD:13479526480464Arsenic affects the methylation of GALNT7 geneCTDPMID:25304211
Galnt7Mousearsenic atom multiple interactionsISORGD:13479526480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092

1 to 20 of 86 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Galnt7Mouseprotein O-linked glycosylation involved_inIBAPANTHER:PTN004287905|UniProtKB:Q86SR1|UniProtKB:Q10472|WB:WBGene00001629|MGI:1349449|MGI:1890480|UniProtKB:Q10471|FB:FBgn0050463|UniProtKB:Q49A17|UniProtKB:Q8IUC8|WB:WBGene00001630|UniProtKB:Q8NCW6|UniProtKB:Q14435|WB:WBGene00001628|FB:FBgn0031530|UniProtKB:Q8N428|FB:FBgn0051956|FB:FBgn0027558|UniProtKB:Q8N4A0|UniProtKB:Q6P9A2|MGI:2139447|Xenbase:XB-GENE-981830|UniProtKB:Q8NCL4|MGI:894693|UniProtKB:Q07537|MGI:8946952290270 GO_CentralGO_REF:0000033
Galnt7Mouseprotein O-linked glycosylation acts_upstream_of_or_withinIDA 2290270 PMID:11278534MGIPMID:11278534

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Galnt7MouseGolgi apparatus is_active_inIBAPANTHER:PTN000187024|UniProtKB:Q10471|FB:FBgn0050463|FB:FBgn0027558|UniProtKB:Q8NCL42290270 GO_CentralGO_REF:0000033
Galnt7MouseGolgi membrane located_inIEAUniProtKB-SubCell:SL-01342290270 UniProtGO_REF:0000044

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Galnt7Mousecarbohydrate binding enablesIEAUniProtKB-KW:KW-04302290270 UniProtGO_REF:0000043
Galnt7Mousemetal ion binding enablesIEAUniProtKB-KW:KW-04792290270 UniProtGO_REF:0000043
Galnt7Mousepolypeptide N-acetylgalactosaminyltransferase activity enablesIBAPANTHER:PTN004287905|WB:WBGene00001629|MGI:1349449|UniProtKB:Q10472|RGD:620358|FB:FBgn0031681|UniProtKB:Q86SR1|UniProtKB:Q29121|FB:FBgn0034025|UniProtKB:Q10471|MGI:1890480|UniProtKB:Q49A17|UniProtKB:Q8IUC8|WB:WBGene00001628|UniProtKB:Q14435|FB:FBgn0036529|UniProtKB:Q8NCW6|WB:WBGene00001630|FB:FBgn0001970|UniProtKB:Q8N428|FB:FBgn0031530|UniProtKB:Q8N4A0|FB:FBgn0030930|FB:FBgn0035375|FB:FBgn0051956|FB:FBgn0027558|MGI:2139447|MGI:1891640|UniProtKB:Q7Z7M9|UniProtKB:Q6P9A2|MGI:894695|UniProtKB:Q07537|UniProtKB:Q8NCL4|MGI:894693|Xenbase:XB-GENE-9818302290270 GO_CentralGO_REF:0000033
Galnt7Mousepolypeptide N-acetylgalactosaminyltransferase activity enablesIDA 2290270 PMID:11278534MGIPMID:11278534

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Galnt7MouseO-linked glycan biosynthetic pathway  IEA 6907045 KEGGmmu:00512

#
Reference Title
Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Characterization of a UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase that displays glycopeptide N-acetylgalactosaminyltransferase activity. Ten Hagen KG, etal., J Biol Chem 1999 Sep 24;274(39):27867-74.
7. Cloning and characterization of a ninth member of the UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase family, ppGaNTase-T9. Ten Hagen KG, etal., J Biol Chem 2001 May 18;276(20):17395-404.
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11159923   PMID:11217851   PMID:11544199   PMID:12477932   PMID:12904583   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:19521500   PMID:19844573   PMID:21267068   PMID:21862448   PMID:21873635   PMID:22643896   PMID:23341629   PMID:25107907   PMID:25615642   PMID:25689854   PMID:30550785   PMID:31740596  
PMID:31882545   PMID:34321999  



Galnt7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39857,976,859 - 58,106,089 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl857,976,862 - 58,106,066 (-)EnsemblGRCm39 Ensembl
GRCm38857,523,825 - 57,653,055 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl857,523,828 - 57,653,032 (-)EnsemblGRCm38mm10GRCm38
MGSCv37860,002,622 - 60,131,852 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36860,416,711 - 60,545,145 (-)NCBIMGSCv36mm8
Celera860,162,978 - 60,223,437 (-)NCBICelera
Cytogenetic Map8B2NCBI
cM Map829.92NCBI
GALNT7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384173,168,811 - 173,323,967 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4173,168,811 - 173,323,967 (+)EnsemblGRCh38hg38GRCh38
GRCh374174,089,962 - 174,245,118 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364174,326,479 - 174,481,693 (+)NCBINCBI36Build 36hg18NCBI36
Build 344174,464,684 - 174,619,847NCBI
Celera4171,415,030 - 171,570,230 (+)NCBICelera
Cytogenetic Map4q34.1NCBI
HuRef4169,916,336 - 169,992,841 (+)NCBIHuRef
CHM1_14174,066,327 - 174,221,597 (+)NCBICHM1_1
T2T-CHM13v2.04176,508,240 - 176,663,390 (+)NCBIT2T-CHM13v2.0
Galnt7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81637,589,368 - 37,713,911 (+)NCBIGRCr8
mRatBN7.21632,578,643 - 32,703,189 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1632,578,690 - 32,702,690 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1636,180,330 - 36,302,351 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01639,591,662 - 39,713,681 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01635,811,832 - 35,933,563 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01635,935,059 - 36,062,734 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1635,934,970 - 36,062,719 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01635,751,092 - 35,878,709 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41635,996,633 - 36,119,925 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11635,996,707 - 36,120,000 (+)NCBI
Celera1632,526,521 - 32,648,482 (+)NCBICelera
Cytogenetic Map16p11NCBI
Galnt7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540333,665,004 - 33,729,891 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540333,665,004 - 33,729,891 (-)NCBIChiLan1.0ChiLan1.0
GALNT7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23170,929,405 - 171,084,412 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14171,310,459 - 171,465,365 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04165,397,407 - 165,552,181 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14177,634,850 - 177,789,735 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4177,634,831 - 177,789,735 (+)Ensemblpanpan1.1panPan2
GALNT7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12523,839,707 - 23,930,907 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2524,445,797 - 24,581,832 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02523,958,062 - 24,094,328 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2523,958,079 - 24,093,568 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12523,904,633 - 24,040,564 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02523,793,458 - 23,930,860 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02523,944,979 - 24,080,829 (+)NCBIUU_Cfam_GSD_1.0
Galnt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494324,025,445 - 24,115,110 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365164,462,935 - 4,530,566 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365164,439,429 - 4,530,534 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GALNT7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1416,717,175 - 16,838,501 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11416,717,172 - 16,838,007 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21417,867,645 - 17,989,132 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GALNT7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17119,280,385 - 119,432,626 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7119,280,468 - 119,432,614 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603799,294,421 - 99,447,134 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Galnt7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247694,677,561 - 4,827,175 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247694,677,286 - 4,828,329 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Galnt7
11510 total Variants

Predicted Target Of
Summary Value
Count of predictions:1372
Count of miRNA genes:512
Interacting mature miRNAs:626
Transcripts:ENSMUST00000034021, ENSMUST00000110316, ENSMUST00000139417, ENSMUST00000156907
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 23 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83429039768290537Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse

1 to 10 of 23 rows
RH135987  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B3.2UniSTS
Galnt7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B3.2UniSTS
cM Map8 UniSTS
RH124833  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38857,580,333 - 57,580,441UniSTSGRCm38
MGSCv37860,059,130 - 60,059,238UniSTSGRCm37
Celera860,219,543 - 60,219,651UniSTS
Cytogenetic Map8B3.2UniSTS
RH125839  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38857,580,190 - 57,580,439UniSTSGRCm38
MGSCv37860,058,987 - 60,059,236UniSTSGRCm37
Celera860,219,400 - 60,219,649UniSTS
Cytogenetic Map8B3.2UniSTS
Whitehead/MRC_RH8667.82UniSTS
D8Dcr22  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38857,629,218 - 57,629,325UniSTSGRCm38
MGSCv37860,108,015 - 60,108,122UniSTSGRCm37
Celera860,268,557 - 60,268,660UniSTS
Cytogenetic Map8B3.2UniSTS
cM Map8 UniSTS






1 to 19 of 19 rows
RefSeq Transcripts NM_001167981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_144731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC130841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF349573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY167413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB524213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 19 of 19 rows

Ensembl Acc Id: ENSMUST00000034021   ⟹   ENSMUSP00000034021
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl857,976,862 - 58,106,065 (-)Ensembl
GRCm38.p6 Ensembl857,523,828 - 57,653,031 (-)Ensembl
Ensembl Acc Id: ENSMUST00000110316   ⟹   ENSMUSP00000105945
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl857,977,734 - 58,106,037 (-)Ensembl
GRCm38.p6 Ensembl857,524,700 - 57,653,003 (-)Ensembl
Ensembl Acc Id: ENSMUST00000139417
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl857,979,058 - 57,991,487 (-)Ensembl
GRCm38.p6 Ensembl857,526,024 - 57,538,453 (-)Ensembl
Ensembl Acc Id: ENSMUST00000156907
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl857,995,029 - 58,106,066 (-)Ensembl
GRCm38.p6 Ensembl857,541,995 - 57,653,032 (-)Ensembl
RefSeq Acc Id: NM_001167981   ⟹   NP_001161453
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39857,976,859 - 58,106,089 (-)NCBI
GRCm38857,523,825 - 57,653,055 (-)ENTREZGENE
MGSCv37860,002,622 - 60,131,852 (-)RGD
Celera860,162,978 - 60,223,437 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_144731   ⟹   NP_653332
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39857,976,859 - 58,106,089 (-)NCBI
GRCm38857,523,825 - 57,653,055 (-)ENTREZGENE
MGSCv37860,002,622 - 60,131,852 (-)RGD
Celera860,162,978 - 60,223,437 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_653332   ⟸   NM_144731
- Peptide Label: isoform 1
- UniProtKB: Q99MD7 (UniProtKB/Swiss-Prot),   Q91VW6 (UniProtKB/Swiss-Prot),   Q8BZW0 (UniProtKB/Swiss-Prot),   Q8BZ70 (UniProtKB/Swiss-Prot),   Q8BY62 (UniProtKB/Swiss-Prot),   Q80VA0 (UniProtKB/Swiss-Prot),   Q3U9K4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001161453   ⟸   NM_001167981
- Peptide Label: isoform 2
- UniProtKB: Q3U9K4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000105945   ⟸   ENSMUST00000110316
Ensembl Acc Id: ENSMUSP00000034021   ⟸   ENSMUST00000034021
Ricin B lectin   Ricin B-type lectin

Name Modeler Protein Id AA Range Protein Structure
AF-Q80VA0-F1-model_v2 AlphaFold Q80VA0 1-657 view protein structure

RGD ID:8667125
Promoter ID:EPDNEW_M11594
Type:initiation region
Name:Galnt7_1
Description:Mus musculus polypeptide N-acetylgalactosaminyltransferase 7, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38857,653,003 - 57,653,063EPDNEW
RGD ID:6842526
Promoter ID:MM_KWN:54474
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung
Transcripts:AK015120_4930412F12RIK,   NM_001167981,   NM_144731,   OTTMUST00000078174
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36860,131,156 - 60,132,282 (-)MPROMDB


1 to 39 of 39 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000031608 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000034021 ENTREZGENE
  ENSMUST00000034021.12 UniProtKB/Swiss-Prot
  ENSMUST00000110316 ENTREZGENE
  ENSMUST00000110316.3 UniProtKB/Swiss-Prot
Gene3D-CATH 2.80.10.50 UniProtKB/Swiss-Prot
  Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A UniProtKB/Swiss-Prot
InterPro GalNAc-T UniProtKB/Swiss-Prot
  Glyco_trans_2-like UniProtKB/Swiss-Prot
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot
  Ricin_B-like_lectins UniProtKB/Swiss-Prot
  Ricin_B_lectin UniProtKB/Swiss-Prot
KEGG Report mmu:108150 UniProtKB/Swiss-Prot
MGD MGI:1349449 ENTREZGENE
NCBI Gene Galnt7 ENTREZGENE
PANTHER N-ACETYLGALACTOSAMINYLTRANSFERASE UniProtKB/Swiss-Prot
  N-ACETYLGALACTOSAMINYLTRANSFERASE 7 UniProtKB/Swiss-Prot
Pfam Glycos_transf_2 UniProtKB/Swiss-Prot
  Ricin_B_lectin UniProtKB/Swiss-Prot
PharmGKB GALNT7 RGD
PhenoGen Galnt7 PhenoGen
PROSITE RICIN_B_LECTIN UniProtKB/Swiss-Prot
SMART RICIN UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50370 UniProtKB/Swiss-Prot
  SSF53448 UniProtKB/Swiss-Prot
UniProt GALT7_MOUSE UniProtKB/Swiss-Prot
  Q3U8I4_MOUSE UniProtKB/TrEMBL
  Q3U9K4 ENTREZGENE, UniProtKB/TrEMBL
  Q80VA0 ENTREZGENE
  Q8BY62 ENTREZGENE
  Q8BZ70 ENTREZGENE
  Q8BZW0 ENTREZGENE
  Q91VW6 ENTREZGENE
  Q99MD7 ENTREZGENE
UniProt Secondary Q8BY62 UniProtKB/Swiss-Prot
  Q8BZ70 UniProtKB/Swiss-Prot
  Q8BZW0 UniProtKB/Swiss-Prot
  Q91VW6 UniProtKB/Swiss-Prot
  Q99MD7 UniProtKB/Swiss-Prot
1 to 39 of 39 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-21 Galnt7  polypeptide N-acetylgalactosaminyltransferase 7  Galnt7  UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7  Symbol and/or name change 5135510 APPROVED
2024-08-21 Galnt7  UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7  Galnt7  polypeptide N-acetylgalactosaminyltransferase 7  Symbol and/or name change 5135510 APPROVED
2017-08-22 Galnt7  polypeptide N-acetylgalactosaminyltransferase 7    UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7  Symbol and/or name change 5135510 APPROVED