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Gene: GALNT7 (polypeptide N-acetylgalactosaminyltransferase 7) Pan paniscus

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Symbol:

GALNT7

Name:

polypeptide N-acetylgalactosaminyltransferase 7

RGD ID:

11957292

Description:

ENCODES a protein that exhibits carbohydrate binding (inferred); glycosyltransferase activity (inferred); metal ion binding (inferred); INVOLVED IN protein O-linked glycosylation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN Golgi apparatus (inferred); Golgi membrane (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

N-acetylgalactosaminyltransferase 7; UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	170,929,405 - 171,084,412 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	171,310,459 - 171,465,365 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	165,397,407 - 165,552,181 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	177,634,850 - 177,789,735 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	177,634,831 - 177,789,735 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein glycosylation (IEA)

protein O-linked glycosylation (IEA,ISO)

Cellular Component

Golgi apparatus (IEA)

Golgi membrane (IEA)

membrane (IEA)

Molecular Function

carbohydrate binding (IEA)

glycosyltransferase activity (IEA)

metal ion binding (IEA)

polypeptide N-acetylgalactosaminyltransferase activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

GALNT7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	170,929,405 - 171,084,412 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	171,310,459 - 171,465,365 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	165,397,407 - 165,552,181 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	177,634,850 - 177,789,735 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	177,634,831 - 177,789,735 (+)	Ensembl	panpan1.1		panPan2

GALNT7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	173,168,811 - 173,323,967 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	173,168,811 - 173,323,967 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	174,089,962 - 174,245,118 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	174,326,479 - 174,481,693 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	174,464,684 - 174,619,847	NCBI
Celera	4	171,415,030 - 171,570,230 (+)	NCBI		Celera
Cytogenetic Map	4	q34.1	NCBI
HuRef	4	169,916,336 - 169,992,841 (+)	NCBI		HuRef
CHM1_1	4	174,066,327 - 174,221,597 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	176,508,240 - 176,663,390 (+)	NCBI		T2T-CHM13v2.0

Galnt7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	57,976,859 - 58,106,089 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	57,976,862 - 58,106,066 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	57,523,825 - 57,653,055 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	57,523,828 - 57,653,032 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	60,002,622 - 60,131,852 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	60,416,711 - 60,545,145 (-)	NCBI		MGSCv36	mm8
Celera	8	60,162,978 - 60,223,437 (-)	NCBI		Celera
Cytogenetic Map	8	B2	NCBI
cM Map	8	29.92	NCBI

Galnt7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	37,589,368 - 37,713,911 (+)	NCBI		GRCr8
mRatBN7.2	16	32,578,643 - 32,703,189 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	32,578,690 - 32,702,690 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	36,180,330 - 36,302,351 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	39,591,662 - 39,713,681 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	35,811,832 - 35,933,563 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	35,935,059 - 36,062,734 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	35,934,970 - 36,062,719 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	35,751,092 - 35,878,709 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	35,996,633 - 36,119,925 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	35,996,707 - 36,120,000 (+)	NCBI
Celera	16	32,526,521 - 32,648,482 (+)	NCBI		Celera
Cytogenetic Map	16	p11	NCBI

Galnt7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	33,665,004 - 33,729,891 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	33,665,004 - 33,729,891 (-)	NCBI	ChiLan1.0	ChiLan1.0

GALNT7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	23,839,707 - 23,930,907 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	24,445,797 - 24,581,832 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	23,958,062 - 24,094,328 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	23,958,079 - 24,093,568 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	23,904,633 - 24,040,564 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	23,793,458 - 23,930,860 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	23,944,979 - 24,080,829 (+)	NCBI		UU_Cfam_GSD_1.0

Galnt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	24,025,445 - 24,115,110 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936516	4,462,935 - 4,530,566 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936516	4,439,429 - 4,530,534 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GALNT7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	16,717,175 - 16,838,501 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	16,717,172 - 16,838,007 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	17,867,645 - 17,989,132 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GALNT7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	119,280,385 - 119,432,626 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	119,280,468 - 119,432,614 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	99,294,421 - 99,447,134 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Galnt7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624769	4,677,561 - 4,827,175 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624769	4,677,286 - 4,828,329 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003823418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008977069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034959426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063603993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063603994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063603995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000045018 ⟹ ENSPPAP00000022211

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	177,634,831 - 177,789,735 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000045023 ⟹ ENSPPAP00000022216

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	177,635,474 - 177,787,485 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000045028 ⟹ ENSPPAP00000022221

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	177,635,474 - 177,763,776 (+)	Ensembl

RefSeq Acc Id:

XM_003823418 ⟹ XP_003823466

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	170,929,405 - 171,084,412 (+)	NCBI
NHGRI_mPanPan1	4	171,310,459 - 171,465,365 (+)	NCBI
Mhudiblu_PPA_v0	4	165,397,409 - 165,552,181 (+)	NCBI
PanPan1.1	4	177,634,851 - 177,789,735 (+)	NCBI

Sequence:

show sequence

GGTAGTCCCACTTCCTGGTTGGCTTCCTGAAAGCCTCTCGACAAGGGGCTCAGGGAAGTGGGTC
TAAGGGAGAGGTGCAGACGAGAGCGACTCCAGGTCCAACGGAGGGGGCGGCGGGCCAGGGGATC
CCGGAGGGCACAGGCGTTAAGGACGGAGTTATGGTCCATAATTACAATAAAAGTTTGGGGATCT
GAAAGCTTTAAGGAGCTGAGCTGCAGGGCAAAGGCTAAGAACCGGACTCGGGGAAAGTGCAAGT
TAGTTACAAGGTAGCAGGGACTGTGAAGGGGGCTCGCGTGGAGAGCAGGGGACTGCGGATCTGG
AAGGGGGCAGGTAGAGAGGAAGGCAGCCTGGCAGAGCGAGGCACACGGGTCAGTCGCAGCTCTG
CGGTGGCCGCCAGAGGGGAGGGGGCCACGGGGAGGAGCGGAGGGAAGAGCCCGGGGAAAGGTGT
AGCCGAGGGGAGTTCCGGATCTGGAGCTGGAAAGGGCAGGCAGCGGAGAGGGCGGCAGCCGTAG
CGGTAGGGGTGGGGGAAAGAGGAGGAGGAGAGCCGGAGGAGGGGGAAGGAGGGAGGGGAGAGCG
GTGGCGGCGGCTGCGCCGGGCTGTGAGTCTCTCGCCGCCGGAGGAAGATGAGGCTGAAGATTGG
GTTCATCTTACGCAGTTTGCTAGTGGTGGGAAGCTTCCTGGGGCTAGTGGTCCTCTGGTCTTCC
CTGACCCCGCGGCCGGACGACCCAAGCCCGCTGAGCAGGATGAGGGAAGACAGAGATGTCAATG
ACCCCATGTCCAACCGAGGCGGCAATGGACTAGCTCCTGGGGAGGACAGATTCAAACCTGTGGT
ACCATGGCCTCATGTTGAAGGAGTAGAAGTGGACTTAGAGTCTATTAGAAGAAAAAACAAGGCC
AAAAATGAACAAGAGCACCATGCTGGAGGAGATTCCCAGAAAGATATCATGCAGAGGCAGTATC
TCACATTTAAGCCTCAGACATTCACCTACCATGATCCTGTGCTTCGCCCAGGGATCCTCGGTAA
CTTTGAACCCAAAGAACCTGAGCCTCCTGGAGTGGTTGGTGGCCCTGGAGAGAAAGCCAAGCCT
TTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACA
TGGTGGCAAGTGACATGATCTCACTGGACCGCAGCGTCAATGACTTACGCCAAGAAGAATGCAA
GTATTGGCATTATGATGAAAACTTGCTCACTTCGAGCGTTGTCATTGTCTTCCATAATGAAGGA
TGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAGGACTCCAAGGAAATATTTAGCAG
AAATTGTGTTAATTGACGATTTCAGTAATAAAGAACACTTAAAAGAAAAACTGGATGAATATAT
TAAGCTGTGGAATGGCCTAGTGAAGGTATTTCGAAATGAAAGAAGGGAAGGTTTAATTCAAGCA
CGAAGTATTGGTGCTCAGAAGGCTAAACTTGGACAGGTTTTGATATACCTTGATGCCCACTGTG
AGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGAACCATTTGCAC
TGTGCCGCTTATAGATGTCATAAATGGCAACACATATGAAATTATACCCCAAGGGGGTGGTGAT
GAAGATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCTCTGACCC
CTCAAGAGAAGAGACTGAGAAAGACAAAAACTGAACCGTATCGGTCCCCAGCCATGGCTGGGGG
ATTATTTGCCATTGAACGAGAGTTCTTCTTTGAATTGGGTCTCTATGATCCAGGTCTCCAGATT
TGGGGTGGTGAAAACTTTGAGATCTCATACAAGATATGGCAGTGTGGTGGCAAATTATTATTTG
TTCCTTGTTCTCGTGTTGGACATATCTACCGTCTTGAGGGCTGGCAAGGAAATCCTCCGCCCAT
TTATGTTGGATCTTCTCCAACTCTGAAGAATTATGTTAGAGTTGTGGAGGTTTGGTGGGATGAA
TATAAAGACTACTTCTATGCTAGTCGTCCTGAATCGCAGGCATTACCATATGGGGATATATCGG
AGCTGAAAAAATTTCGAGAAGATCACAACTGCAAAAGTTTTAAGTGGTTCATGGAAGAAATAGC
TTATGATATCACCTCACACTACCCTTTGCCACCCAAAAATGTTGACTGGGGAGAAATCAGAGGC
TTTGAAACTGCTTACTGCATTGATAGCATGGGAAAAACAAATGGGGGCTTTGTTGAACTAGGAC
CCTGCCACAGGATGGGAGGGAATCAGCTTTTCAGAATCAATGAAGCAAATCAACTCATGCAGTA
TGACCAGTGTTTGACGAAGGGAGCTGATGGATCGAAAGTTATGATTACACACTGTGATCTAAAT
GAATGTAAGGAATGGCAGTACTTCAAGAACCTGCACAGATTTACTCATATTCCTTCAGGAAAGT
GTTTAGATCGCTCAGAGGTCCTGCATCAAGTATTCATCTCCAATTGTGACTCCAGTAAAACGAC
TCAAAAATGGGAAATGAATAACATCCATAGTGTTTAGAGAGAAAAAAATAAACCAATAACCTAC
CTACTGACAAGTAAATTTATACAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATT
AACTCTGTATAGCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGAT
TTTACAATAACATTATCATCTGCAGTTACTGTTTACAAGACTGCTTTTACCTTAAACTTTGTAG
ATGTTTACATCTTTTTGTTGTGTTTTAAGATGATGTTGGTAATTTGTGCCTTTAGCTCTGTTTT
ATTAGACAGAGTTAAAGCATGTTGTCTTCTTTGGGATTACACTCAGGGGTCTGAAAGGCAGTTT
GATTTTTATTTTTAACACACTTGAAAAAAGGTTGGAGTAGCCAGACTTTCATATATAACTTGGT
GATTATCAACCTGTTGTGTCTTTATTTAATTTTACATCTTTTTGAAGCACTGCCACAGGTTATT
AGCCAAGGTGGCCTTCCTTCACAGTCATGCTGCTTTTTTGAAAGGTGAATTTCAACACATTTAG
TGCCTCTTTCATTTCTCAGTATATATTTCAAGAGCTTGTGATGAAATTTATAGGATGGTAATGA
TGGACTTGTCACCTGTATGGGGAATACTTTTACTACTTAGAAATGAATTTGTGTGCTGCCATTT
GCTATAAAGTTGAACTTTGTATGGCTTGAAAAAGAAATGACAATATGGAACATCCCAAGGCTGT
CCCATAGGGTTGGAAGTTGTGTAGCATTCACTCCCTTACCTACTGGCATTCCCAGTGCCCTCTG
TCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAACTAGAGAAAAATTGTCCACTGACATT
TGGGATTTACTTTTCTCCAATACCTGCCAATACAGAAAACTATTATCGGTTGTTATTGTTATCC
CTTGAAAGCGAGGGTGACAAAAACAACAAAACACCGTTATAAACACATCAAAGGTTCATTCTGA
CTGAGGTAAGACTTTCCAAGCCCTTGTTAGATTAGGCCTTATAAAACTTGTGTGCATTATAACC
TAAGCTGTGCAACCTGTGAAGCCAAGAGTGAACTGATGTTTCATTTATATTTTCATCCAAATGA
CATTATCTGCACGTTTTTAAAATTTAAAAACAAAGGACTATTTAAAAATACAGTTTATTAACAA
ACGTGAACTACTTTCTGTTACATTAGGTGTTCCCTAGTGTTTCTTAATTTCTTTTTAGAAAGTG
TATTTTTATTAGTATTTTTCCGGTGAACAGAAGATTTGTTTGGATTTAAACATTTACTAAGACA
GTACCTATTAGGAAAACCAAATATTGCAAATGGTCAATTCGATTTTAATTTCTCAAAAGATACT
CTGTTATCCAGAAGATTAAAATGCCTACATTGAGTGCTTAAAAAAAAAAAAACAACTGTGATGA
TGTGAGCAGAATGGCAAGTAAGTTAAGCATTTTTGATCCTGTAATCATGGTATCATTACAATGA
AAGGAATTCACAAACTACTGCCAGAGGAAGTTTGTTTTTTAATTTAAGAGGGAAATATAACCTA
TAAATTTGTTTCTTCCAAGCTTAGCTCTTAAATTTGGAGAATCAAAGTTAAACATCCTCAACAG
AGTTTTATTTATAATTTTGAATTGTCAATTTGTATTTTGCTACTGATCTGTGATCAACCATTTT
AACTTTCATCTCTAGGGATGTTTAACATTTATAATTGCAAAATAAACCAACTATAAAAAAGAAA
CTAAGAGAGAATTGGTACTTTAATTACTTGTGTGTTTGCAAATAGGCTCCATTTTCCATGTTGA
GTAGATTATAACCTTATTAACTATGCATAGGCCTAAGAAAGGTGGCAATGAACTGTGCATGTAA
ATTTTAAATGGGTACTTTGTGCAATTCGTTAAAAGAAGATACTCTATGAATATGATTCTATATA
TTGAAATCAGAAAACCTACCAAACAAAAACATCAGAAGCTGCTGCCATAATGACTATTTTCTAC
TGTAGGCTGCTTTGGAAATAATTCCCATATCCTTGCTTTGTAAGTTGGTAATATCACTATGCAT
TTCTACACATTTTATAAATTTGATTTATGCAGATTTTGATACACTGTATGTTTCTGTAGAAATT
GTATAAATATTCAAAATTTTATTAGGATAAATTTGAGAAACTTATGTATATCTTAATTCTGGGT
TGCTTGTTTTTTAGGTGACAAAAAATAAAATATTGTATTTTAATTCA

hide sequence

RefSeq Acc Id:

XM_008977069 ⟹ XP_008975317

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	170,929,453 - 171,084,412 (+)	NCBI
NHGRI_mPanPan1	4	171,310,494 - 171,465,365 (+)	NCBI
Mhudiblu_PPA_v0	4	165,397,407 - 165,552,177 (+)	NCBI
PanPan1.1	4	177,634,850 - 177,789,735 (+)	NCBI

Sequence:

show sequence

CGGTAGTCCCACTTCCTGGTTGGCTTCCTGAAAGCCTCTCGACAAGGGGCTCAGGGAAGTGGGT
CTAAGGGAGAGGTGCAGACGAGAGCGACTCCAGGTCCAACGGAGGGGGCGGCGGGCCAGGGGAT
CCCGGAGGGCACAGGCGTTAAGGACGGAGTTATGGTCCATAATTACAATAAAAGTTTGGGGATC
TGAAAGCTTTAAGGAGCTGAGCTGCAGGGCAAAGGCTAAGAACCGGACTCGGGGAAAGTGCAAG
TTAGTTACAAGGTAGCAGGGACTGTGAAGGGGGCTCGCGTGGAGAGCAGGGGACTGCGGATCTG
GAAGGGGGCAGGTAGAGAGGAAGGCAGCCTGGCAGAGCGAGGCACACGGGTCAGTCGCAGCTCT
GCGGTGGCCGCCAGAGGGGAGGGGGCCACGGGGAGGAGCGGAGGGAAGAGCCCGGGGAAAGGTG
TAGCCGAGGGGAGTTCCGGATCTGGAGCTGGAAAGGGCAGGCAGCGGAGAGGGCGGCAGCCGTA
GCGGTAGGGGTGGGGGAAAGAGGAGGAGGAGAGCCGGAGGAGGGGGAAGGAGGGAGGGGAGAGC
GGTGGCGGCGGCTGCGCCGGGCTGTGAGTCTCTCGCCGCCGGAGGAAGATGAGGCTGAAGATTG
GGTTCATCTTACGCAGTTTGCTAGTGGTGGGAAGCTTCCTGGGGCTAGTGGTCCTCTGGTCTTC
CCTGACCCCGCGGCCGGACGACCCAAGCCCGCTGAGCAGGATGAGGGAAGACAGAGATGTCAAT
GACCCCATGTCCAACCGAGGCGGCAATGGACTAGCTCCTGGGGAGGACAGATTCAAACCTGTGG
TACCATGGCCTCATGTTGAAGGAGTAGAAGTGGACTTAGAGTCTATTAGAAGAAAAAACAAGGC
CAAAAATGAACAAGAGCACCATGCTGGAGGAGATTCCCAGAAAGATATCATGCAGAGGCAGTAT
CTCACATTTAAGCCTCAGACATTCACCTACCATGATCCTGTGCTTCGCCCAGGGATCCTCGGTA
ACTTTGAACCCAAAGAACCTGAGCCTCCTGGAGTGGTTGGTGGCCCTGGAGAGAAAGCCAAGCC
TTTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAAC
ATGGTGGCAAGTGACATGATCTCACTGGACCGCAGCGTCAATGACTTACGCCAAGAAGAATGCA
AGTATTGGCATTATGATGAAAACTTGCTCACTTCGAGCGTTGTCATTGTCTTCCATAATGAAGG
ATGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAGGACTCCAAGGAAATATTTAGCA
GAAATTGTGTTAATTGACGATTTCAGTAATAAAGAACACTTAAAAGAAAAACTGGATGAATATA
TTAAGCTGTGGAATGGCCTAGTGAAGGTATTTCGAAATGAAAGAAGGGAAGGTTTAATTCAAGC
ACGAAGTATTGGTGCTCAGAAGGCTAAACTTGGACAGGTTTTGATATACCTTGATGCCCACTGT
GAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGAACTACATGTA
CTGTGCCTCTAATAGATTACATAGATGGGAATGATTATTCCATTGAACCACAGCAAGGTGGGGA
TGAAGATGGTTTTGCCAGAGGGGCCTGGGACTGGAGTTTACTATGGAAACGTATTCCTCTAAGC
CACAAGGAAAAGGCCAAAAGAAAACATAAAACTGAACCTTATCGGTCCCCAGCCATGGCTGGGG
GATTATTTGCCATTGAACGAGAGTTCTTCTTTGAATTGGGTCTCTATGATCCAGGTCTCCAGAT
TTGGGGTGGTGAAAACTTTGAGATCTCATACAAGATATGGCAGTGTGGTGGCAAATTATTATTT
GTTCCTTGTTCTCGTGTTGGACATATCTACCGTCTTGAGGGCTGGCAAGGAAATCCTCCGCCCA
TTTATGTTGGATCTTCTCCAACTCTGAAGAATTATGTTAGAGTTGTGGAGGTTTGGTGGGATGA
ATATAAAGACTACTTCTATGCTAGTCGTCCTGAATCGCAGGCATTACCATATGGGGATATATCG
GAGCTGAAAAAATTTCGAGAAGATCACAACTGCAAAAGTTTTAAGTGGTTCATGGAAGAAATAG
CTTATGATATCACCTCACACTACCCTTTGCCACCCAAAAATGTTGACTGGGGAGAAATCAGAGG
CTTTGAAACTGCTTACTGCATTGATAGCATGGGAAAAACAAATGGGGGCTTTGTTGAACTAGGA
CCCTGCCACAGGATGGGAGGGAATCAGCTTTTCAGAATCAATGAAGCAAATCAACTCATGCAGT
ATGACCAGTGTTTGACGAAGGGAGCTGATGGATCGAAAGTTATGATTACACACTGTGATCTAAA
TGAATGTAAGGAATGGCAGTACTTCAAGAACCTGCACAGATTTACTCATATTCCTTCAGGAAAG
TGTTTAGATCGCTCAGAGGTCCTGCATCAAGTATTCATCTCCAATTGTGACTCCAGTAAAACGA
CTCAAAAATGGGAAATGAATAACATCCATAGTGTTTAGAGAGAAAAAAATAAACCAATAACCTA
CCTACTGACAAGTAAATTTATACAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTAT
TAACTCTGTATAGCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGA
TTTTACAATAACATTATCATCTGCAGTTACTGTTTACAAGACTGCTTTTACCTTAAACTTTGTA
GATGTTTACATCTTTTTGTTGTGTTTTAAGATGATGTTGGTAATTTGTGCCTTTAGCTCTGTTT
TATTAGACAGAGTTAAAGCATGTTGTCTTCTTTGGGATTACACTCAGGGGTCTGAAAGGCAGTT
TGATTTTTATTTTTAACACACTTGAAAAAAGGTTGGAGTAGCCAGACTTTCATATATAACTTGG
TGATTATCAACCTGTTGTGTCTTTATTTAATTTTACATCTTTTTGAAGCACTGCCACAGGTTAT
TAGCCAAGGTGGCCTTCCTTCACAGTCATGCTGCTTTTTTGAAAGGTGAATTTCAACACATTTA
GTGCCTCTTTCATTTCTCAGTATATATTTCAAGAGCTTGTGATGAAATTTATAGGATGGTAATG
ATGGACTTGTCACCTGTATGGGGAATACTTTTACTACTTAGAAATGAATTTGTGTGCTGCCATT
TGCTATAAAGTTGAACTTTGTATGGCTTGAAAAAGAAATGACAATATGGAACATCCCAAGGCTG
TCCCATAGGGTTGGAAGTTGTGTAGCATTCACTCCCTTACCTACTGGCATTCCCAGTGCCCTCT
GTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAACTAGAGAAAAATTGTCCACTGACAT
TTGGGATTTACTTTTCTCCAATACCTGCCAATACAGAAAACTATTATCGGTTGTTATTGTTATC
CCTTGAAAGCGAGGGTGACAAAAACAACAAAACACCGTTATAAACACATCAAAGGTTCATTCTG
ACTGAGGTAAGACTTTCCAAGCCCTTGTTAGATTAGGCCTTATAAAACTTGTGTGCATTATAAC
CTAAGCTGTGCAACCTGTGAAGCCAAGAGTGAACTGATGTTTCATTTATATTTTCATCCAAATG
ACATTATCTGCACGTTTTTAAAATTTAAAAACAAAGGACTATTTAAAAATACAGTTTATTAACA
AACGTGAACTACTTTCTGTTACATTAGGTGTTCCCTAGTGTTTCTTAATTTCTTTTTAGAAAGT
GTATTTTTATTAGTATTTTTCCGGTGAACAGAAGATTTGTTTGGATTTAAACATTTACTAAGAC
AGTACCTATTAGGAAAACCAAATATTGCAAATGGTCAATTCGATTTTAATTTCTCAAAAGATAC
TCTGTTATCCAGAAGATTAAAATGCCTACATTGAGTGCTTAAAAAAAAAAAAACAACTGTGATG
ATGTGAGCAGAATGGCAAGTAAGTTAAGCATTTTTGATCCTGTAATCATGGTATCATTACAATG
AAAGGAATTCACAAACTACTGCCAGAGGAAGTTTGTTTTTTAATTTAAGAGGGAAATATAACCT
ATAAATTTGTTTCTTCCAAGCTTAGCTCTTAAATTTGGAGAATCAAAGTTAAACATCCTCAACA
GAGTTTTATTTATAATTTTGAATTGTCAATTTGTATTTTGCTACTGATCTGTGATCAACCATTT
TAACTTTCATCTCTAGGGATGTTTAACATTTATAATTGCAAAATAAACCAACTATAAAAAAGAA
ACTAAGAGAGAATTGGTACTTTAATTACTTGTGTGTTTGCAAATAGGCTCCATTTTCCATGTTG
AGTAGATTATAACCTTATTAACTATGCATAGGCCTAAGAAAGGTGGCAATGAACTGTGCATGTA
AATTTTAAATGGGTACTTTGTGCAATTCGTTAAAAGAAGATACTCTATGAATATGATTCTATAT
ATTGAAATCAGAAAACCTACCAAACAAAAACATCAGAAGCTGCTGCCATAATGACTATTTTCTA
CTGTAGGCTGCTTTGGAAATAATTCCCATATCCTTGCTTTGTAAGTTGGTAATATCACTATGCA
TTTCTACACATTTTATAAATTTGATTTATGCAGATTTTGATACACTGTATGTTTCTGTAGAAAT
TGTATAAATATTCAAAATTTTATTAGGATAAATTTGAGAAACTTATGTATATCTTAATTCTGGG
TTGCTTGTTTTTTAGGTGACAAAAAATAAAATATTGTATTTTAATTCA

hide sequence

RefSeq Acc Id:

XM_063603993 ⟹ XP_063460063

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	170,989,744 - 171,084,412 (+)	NCBI

RefSeq Acc Id:

XM_063603994 ⟹ XP_063460064

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	170,984,467 - 171,084,412 (+)	NCBI

RefSeq Acc Id:

XM_063603995 ⟹ XP_063460065

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	170,955,920 - 171,084,412 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003823466	(Get FASTA)	NCBI Sequence Viewer
	XP_008975317	(Get FASTA)	NCBI Sequence Viewer
	XP_063460063	(Get FASTA)	NCBI Sequence Viewer
	XP_063460064	(Get FASTA)	NCBI Sequence Viewer
	XP_063460065	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000022211.1
	ENSPPAP00000022216.1
	ENSPPAP00000022221.1

RefSeq Acc Id:	XP_008975317 ⟸ XM_008977069
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9B412 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLKIGFILRSLLVVGSFLGLVVLWSSLTPRPDDPSPLSRMREDRDVNDPMSNRGGNGLAPGED RFKPVVPWPHVEGVEVDLESIRRKNKAKNEQEHHAGGDSQKDIMQRQYLTFKPQTFTYHDPVLR PGILGNFEPKEPEPPGVVGGPGEKAKPLVLGPEFKQAIQASIKEFGFNMVASDMISLDRSVNDL RQEECKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKE KLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKAKLGQVLIYLDAHCEVAVNWYAPLVAPISK DRTTCTVPLIDYIDGNDYSIEPQQGGDEDGFARGAWDWSLLWKRIPLSHKEKAKRKHKTEPYRS PAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLEGWQ GNPPPIYVGSSPTLKNYVRVVEVWWDEYKDYFYASRPESQALPYGDISELKKFREDHNCKSFKW FMEEIAYDITSHYPLPPKNVDWGEIRGFETAYCIDSMGKTNGGFVELGPCHRMGGNQLFRINEA NQLMQYDQCLTKGADGSKVMITHCDLNECKEWQYFKNLHRFTHIPSGKCLDRSEVLHQVFISNC DSSKTTQKWEMNNIHSV hide sequence

RefSeq Acc Id:	XP_003823466 ⟸ XM_003823418
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9B408 (UniProtKB/TrEMBL), A0A2R9B412 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLKIGFILRSLLVVGSFLGLVVLWSSLTPRPDDPSPLSRMREDRDVNDPMSNRGGNGLAPGED RFKPVVPWPHVEGVEVDLESIRRKNKAKNEQEHHAGGDSQKDIMQRQYLTFKPQTFTYHDPVLR PGILGNFEPKEPEPPGVVGGPGEKAKPLVLGPEFKQAIQASIKEFGFNMVASDMISLDRSVNDL RQEECKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKE KLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKAKLGQVLIYLDAHCEVAVNWYAPLVAPISK DRTICTVPLIDVINGNTYEIIPQGGGDEDGYARGAWDWSMLWKRVPLTPQEKRLRKTKTEPYRS PAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLEGWQ GNPPPIYVGSSPTLKNYVRVVEVWWDEYKDYFYASRPESQALPYGDISELKKFREDHNCKSFKW FMEEIAYDITSHYPLPPKNVDWGEIRGFETAYCIDSMGKTNGGFVELGPCHRMGGNQLFRINEA NQLMQYDQCLTKGADGSKVMITHCDLNECKEWQYFKNLHRFTHIPSGKCLDRSEVLHQVFISNC DSSKTTQKWEMNNIHSV hide sequence

Ensembl Acc Id:

ENSPPAP00000022211 ⟸ ENSPPAT00000045018

Ensembl Acc Id:

ENSPPAP00000022221 ⟸ ENSPPAT00000045028

Ensembl Acc Id:

ENSPPAP00000022216 ⟸ ENSPPAT00000045023

RefSeq Acc Id:	XP_063460065 ⟸ XM_063603995
- Peptide Label:	isoform X5
- UniProtKB:	A0A2R9B412 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063460064 ⟸ XM_063603994
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R9B412 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063460063 ⟸ XM_063603993
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9B412 (UniProtKB/TrEMBL)

Protein Domains

Glycosyltransferase 2-like Ricin B lectin

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000034268	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000045018.1	UniProtKB/TrEMBL
	ENSPPAT00000045023.1	UniProtKB/TrEMBL
	ENSPPAT00000045028.1	UniProtKB/TrEMBL
Gene3D-CATH	2.80.10.50	UniProtKB/TrEMBL
InterPro	GalNAc-T	UniProtKB/TrEMBL
	Glyco_trans_2-like	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
	Ricin_B-like_lectins	UniProtKB/TrEMBL
	Ricin_B_lectin	UniProtKB/TrEMBL
KEGG Report	pps:100981343	UniProtKB/TrEMBL
NCBI Gene	GALNT7	ENTREZGENE
PANTHER	N-ACETYLGALACTOSAMINYLTRANSFERASE	UniProtKB/TrEMBL
	N-ACETYLGALACTOSAMINYLTRANSFERASE 7	UniProtKB/TrEMBL
Pfam	Glycos_transf_2	UniProtKB/TrEMBL
	Ricin_B_lectin	UniProtKB/TrEMBL
PROSITE	RICIN_B_LECTIN	UniProtKB/TrEMBL
SMART	RICIN	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50370	UniProtKB/TrEMBL
	SSF53448	UniProtKB/TrEMBL
UniProt	A0A2R9B408	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9B412	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9B416_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar