4930470O06Rik (RIKEN cDNA 4930470O06 gene) - Rat Genome Database

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Gene: 4930470O06Rik (RIKEN cDNA 4930470O06 gene) Mus musculus
Analyze
Symbol: 4930470O06Rik
Name: RIKEN cDNA 4930470O06 gene
RGD ID: 1609207
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC75017; uncharacterized protein LOC75017
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39860,278,683 - 60,297,755 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl860,278,683 - 60,297,757 (+)EnsemblGRCm39 Ensembl
GRCm38859,825,649 - 59,844,721 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl859,825,649 - 59,844,723 (+)EnsemblGRCm38mm10GRCm38
Celera862,427,078 - 62,446,507 (+)NCBICelera
Cytogenetic Map8B3.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in 4930470O06Rik
458 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
10043974Obq30_mobesity QTL 30 (mouse)Not determined82658332260583322Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3250657271740637Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83429039768290537Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84474791478748059Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84809006482090180Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84819016882190288Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85050595884505958Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85913640493136404Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000209438
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl860,278,683 - 60,297,757 (+)Ensembl
GRCm38.p6 Ensembl859,825,649 - 59,844,723 (+)Ensembl
RefSeq Acc Id: NR_126087
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39860,278,683 - 60,297,755 (+)NCBI
GRCm38859,825,649 - 59,844,721 (+)NCBI
Celera862,427,078 - 62,446,507 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000110406 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000209438 ENTREZGENE
MGD MGI:1922267 ENTREZGENE
NCBI Gene 75017 ENTREZGENE
PhenoGen 4930470O06Rik PhenoGen
RNAcentral URS00007E3E9B RNACentral