Ccdc124 (coiled-coil domain containing 124)

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Gene: Ccdc124 (coiled-coil domain containing 124) Mus musculus

Analyze

Symbol:

Ccdc124

Name:

coiled-coil domain containing 124

RGD ID:

1332007

MGI Page

MGI

Description:

Predicted to be involved in cell cycle and cell division. Predicted to localize to cytosol and plasma membrane. Orthologous to human CCDC124 (coiled-coil domain containing 124); INTERACTS WITH 1,2-dimethylhydrazine; 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

1810023B24Rik; coiled-coil domain-containing protein 124

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCDC124 (coiled-coil domain containing 124)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Ccdc124 (coiled-coil domain containing 124)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Ccdc124 (coiled-coil domain containing 124)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCDC124 (coiled-coil domain containing 124)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCDC124 (coiled-coil domain containing 124)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ccdc124 (coiled-coil domain containing 124)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCDC124 (coiled-coil domain containing 124)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	CCDC124 (coiled-coil domain containing 124)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ccdc124 (coiled-coil domain containing 124)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Ccdc124 (coiled-coil domain containing 124)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	CCDC124 (coiled-coil domain containing 124)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	ccdc124 (coiled-coil domain containing 124)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam\|ZFIN)
Drosophila melanogaster (fruit fly):	CG6013	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Caenorhabditis elegans (roundworm):	Y73E7A.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	71,320,870 - 71,326,134 (-)	NCBI	GRCm39		mm39
GRCm38	8	70,868,226 - 70,873,490 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	70,868,227 - 70,873,935 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	73,392,126 - 73,397,389 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	73,797,216 - 73,802,479 (-)	NCBI			mm8
Celera	8	73,429,530 - 73,434,793 (-)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

2,3',4,4',5-Pentachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

beauvericin (ISO)

benzo[a]pyrene (EXP)

bisphenol A (ISO)

C60 fullerene (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

choline (EXP)

cyclosporin A (ISO)

dioxygen (EXP)

endosulfan (ISO)

ethanol (EXP)

flutamide (ISO)

folic acid (EXP)

L-methionine (EXP)

paracetamol (EXP)

pirinixic acid (ISO)

tetrachloroethene (EXP)

titanium dioxide (EXP)

valproic acid (ISO)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

cell division (IEA)

Cellular Component

cytoplasm (IEA)

cytoskeleton (IEA)

cytosol (ISO)

plasma membrane (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

decreased brain size (IEA)

small heart (IEA)

small liver (IEA)

small lung (IEA)

small spleen (IEA)

References

References - curated


1.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGD and Homologene mouse data transfer
3.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:12477932	PMID:14610273	PMID:16141072	PMID:16141073	PMID:17967808	PMID:18799693	PMID:21677750
PMID:28671696	PMID:30196744

Genomics

Comparative Map Data

Ccdc124
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	71,320,870 - 71,326,134 (-)	NCBI	GRCm39		mm39
GRCm38	8	70,868,226 - 70,873,490 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	70,868,227 - 70,873,935 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	73,392,126 - 73,397,389 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	73,797,216 - 73,802,479 (-)	NCBI			mm8
Celera	8	73,429,530 - 73,434,793 (-)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI

CCDC124
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	17,933,015 - 17,943,991 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	17,933,015 - 17,943,985 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	18,043,824 - 18,054,794 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	17,906,905 - 17,915,783 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	19	17,945,548 - 17,956,518 (+)	NCBI
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	17,608,966 - 17,619,929 (+)	NCBI		HuRef
CHM1_1	19	18,043,548 - 18,054,513 (+)	NCBI		CHM1_1

Ccdc124
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	16	20,317,446 - 20,323,265 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,317,446 - 20,323,265 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,174,990 - 20,180,809 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	19,074,584 - 19,080,343 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	16	19,075,011 - 19,080,084 (+)	NCBI
Celera	16	18,759,366 - 18,765,185 (+)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

Ccdc124
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	3,349,653 - 3,353,122 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	3,349,444 - 3,355,748 (-)	NCBI	ChiLan1.0	ChiLan1.0

CCDC124
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	18,386,017 - 18,397,647 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	18,386,017 - 18,397,647 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	17,412,778 - 17,423,756 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

CCDC124
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	20	44,977,393 - 44,983,349 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	20	44,977,237 - 44,987,436 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Ccdc124
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936596	3,141,177 - 3,148,110 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC124
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	59,819,111 - 59,831,482 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	59,821,557 - 59,831,561 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	59,390,287 - 59,400,283 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC124
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	16,400,252 - 16,418,474 (+)	NCBI
ChlSab1.1 Ensembl	6	16,399,872 - 16,418,596 (+)	Ensembl

Ccdc124
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624908	1,422,392 - 1,427,392 (+)	NCBI

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
14747005	Mancz7_m	mandible centroid size 7 (mouse)					8	50053306	84053306	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37400000	109600000	Mouse
10766466	Char12_m	P. chabaudi malaria resistance QTL 12 (mouse)					8	68269827	82600347	Mouse
1301952	Im3_m	immunoregulatory 3 (mouse)			Not determined		8	54706614	88706763	Mouse
14700686	Civq3_m	cerebral infarct volume QTL 3 (mouse)					8	51882191	85882191	Mouse
1357787	Vtbt5_m	vertebral trabecular bone trait 5 (mouse)			Not determined		8	65357768	99357920	Mouse
1301544	Iba3_m	induction of brown adipocytes 3 (mouse)			Not determined		8	44294880	78295025	Mouse
4142283	Imraq2_m	immune response to AAV2 QTL 2 (mouse)			Not determined		8	70305375	104305495	Mouse
1301441	Skull11_m	skull morphology 11 (mouse)			Not determined		8	47737134	81737254	Mouse
10766453	Char11_m	P. chabaudi malaria resistance QTL 11 (mouse)					8	47637030	81637146	Mouse
10412287	Carg3_m	Candida albicans resistance gene 3 (mouse)			Not determined		8	55545028	89545028	Mouse
14746987	Manh64_m	mandible shape 64 (mouse)					8	50053306	84053306	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	34642776	114837007	Mouse
12904744	Carcdq1_m	cardiac collagen deposition QTL 1 (mouse)					8	39709256	94689598	Mouse
4141797	Skmw16_m	skeletal muscle weight 16 (mouse)			Not determined		8	63939547	97939696	Mouse
4140966	Egq12_m	early growth QTL 12 (mouse)			Not determined			32016544	71287993	Mouse
1301767	Fcsa2_m	femoral cross-sectional area 2 (mouse)			Not determined		8	70305375	104305495	Mouse
1558870	Eae36_m	experimental allergic encephalomyelitis susceptibility 36 (mouse)			Not determined		8	14723160	71045600	Mouse
10043992	Hbnr11_m	Heligmosomoides bakeri nematode resistance 11 (mouse)			Not determined		8	65600207	99600347	Mouse
10043975	Obq31_m	obesity QTL 31 (mouse)			Not determined		8	58409776	92409776	Mouse
4141285	Tgq18_m	triglyceride QTL 18 (mouse)			Not determined			63460107	97460107	Mouse
11353828	Gf7_m	gonadal fat pad weight 7 (mouse)					8	58201479	92201479	Mouse
4141437	W10q14_m	weight 10 weeks QTL 14 (mouse)			Not determined			32016544	71287993	Mouse
1301506	Aevm1_m	autoimmune extremity vasculitis in MRL mice 1 (mouse)			Not determined		8	54287817	88287993	Mouse
1301013	Capsq4_m	capsaicin sensitivity related QTL 4 (mouse)			Not determined		8	36163000	92728652	Mouse
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32016544	117238700	Mouse
1357715	Alaa3_m	alopecia areata 3 (mouse)			Not determined		8	48792939	82793021	Mouse
1301688	Orch6_m	autoimmune orchitis resistance 6 (mouse)			Not determined		8	60786850	94786976	Mouse
4141172	W6q9_m	weight 6 weeks QTL 9 (mouse)			Not determined			32016544	71287993	Mouse
1301717	Adip4_m	adiposity 4 (mouse)			Not determined		8	47637030	81637146	Mouse
1357811	Orq3_m	ovulation rate QTL 3 (mouse)			Not determined		8	32016544	71287993	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	224
Count of miRNA genes:	194
Interacting mature miRNAs:	209
Transcripts:	ENSMUST00000007865
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006509655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036153949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC019302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK007589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK088037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC049678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC050938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000007865 ⟹ ENSMUSP00000007865

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,868,227 - 70,873,935 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000212680 ⟹ ENSMUSP00000148322

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	70,869,988 - 70,873,383 (-)	Ensembl

RefSeq Acc Id:

NM_026964 ⟹ NP_081240

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	71,320,871 - 71,326,134 (-)	NCBI
GRCm38	8	70,868,227 - 70,873,490 (-)	NCBI
MGSCv37	8	73,392,126 - 73,397,389 (-)	RGD
Celera	8	73,429,530 - 73,434,793 (-)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

GACACGCGACCGAGCCGGTGCCGGGGGAAGAGCCTGCTGAGGGATGCCCAAGAAGTTCCAGGGC
GAGAACAGCAAGTCGGCAGCTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCCGCTGATGCCA
AGAAACAGAAGGAGCTGGAAGATGCTTACTGGAAGGATGAGGACAAACACGTGATGCGGAAGGA
GCAACGCAAGGAGGAGAAGGAGAAGCGACGCCTGGAGCAGCTGGAGCGCAAGAAGGAGACGCAG
CGCCTGCTGGAGGAGGAAGACTCACGGCTCAAAGGCGGCAAGGCCCCACGTGTGGCGCCCGCCA
AGGTCACACGTGCACAGATCGAGGACTCGCTGCGGAGAGAGCAGCGGGCAGAGCCAGTGGAAAA
GGCTAAGAGCCACCTAGAGCTGCCACTGGAAGAGAACCTTAACCGGCGCCTGCAGGAAGAGGGC
AGCGTGGAGGCGCGCACTGTGGAGGACGCCATCGCAGTGCTCAGTGTGGCTGAGGAAGCTGACC
GGCATCCTGAGCGCCGGATGCGAGCGGCCTTCACCGCGTTTGAGGAGGTGCAACTGCCACGGTT
GAAGCAGGAGAACCCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCTGAAGAAGGAGTGGTTG
CGCTCCCCTGACAACCCGATGAACCAGCGCGCCCTGCCCTTTAATGCGCCCAAGTGACAGAACC
AGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGCCTGACCAGGGATTCAT
AGAGTTCCGGGCCTGGGATTCTCCCAGCTGCGCCATAGGTCATCCTCAACAACCCAGAGGGTCC
CTGCTCTGACATCCTAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCCCAATAAAGG
CTGTGGCGAGGCTGA

hide sequence

RefSeq Acc Id:

XM_006509655 ⟹ XP_006509718

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	71,320,870 - 71,326,112 (-)	NCBI
GRCm38	8	70,868,226 - 70,873,468 (-)	NCBI

Sequence:

show sequence

GGGGGAAGAGGTAGGAACGGCTGTGGCGCGGGCGGAGCCGGGTTGCGGGGCACGCTGGGCGGGC
GCGGCTCGGCCTGGGGGTCCTGCCGGCGGGAAGGCGGAACTGGAGATGGGGTGCCCGGTGGTGG
GTGCTCCCAGCGCGCAGGCGCAGAAGCTCGCGGGGAGTTCAGCCAGTTTCCGGCCCAGGTCGAG
CCGGGAGGGCTTCCTGGAGGAGGAGGAGTAGGAGTTTTCTGTCACTTTCCTCCTGCCGCGCGGC
CTGGCAGTCATGGGGAACCACGTAGGCACTTTTCGAAGGGGATTATTTAGAGTCCTGGGCTCAT
TTTGTAGTCTAGGCTGCCTCGAACTCAGTGTAATTCTCCTACTTCAGCATTGCTAAGTGCTGGA
ATCACAGGCGTGGGCCCACGATGCCCGGCCTCGGACCCTAGCCTGCTGAGGGATGCCCAAGAAG
TTCCAGGGCGAGAACAGCAAGTCGGCAGCTGCCCGAGCACGGAGGGCTGAAGCCAAGGCGGCCG
CTGATGCCAAGAAACAGAAGGAGCTGGAAGATGCTTACTGGAAGGATGAGGACAAACACGTGAT
GCGGAAGGAGCAACGCAAGGAGGAGAAGGAGAAGCGACGCCTGGAGCAGCTGGAGCGCAAGAAG
GAGACGCAGCGCCTGCTGGAGGAGGAAGACTCACGGCTCAAAGGCGGCAAGGCCCCACGTGTGG
CGCCCGCCAAGGTCACACGTGCACAGATCGAGGACTCGCTGCGGAGAGAGCAGCGGGCAGAGCC
AGTGGAAAAGGCTAAGAGCCACCTAGAGCTGCCACTGGAAGAGAACCTTAACCGGCGCCTGCAG
GAAGAGGGCAGCGTGGAGGCGCGCACTGTGGAGGACGCCATCGCAGTGCTCAGTGTGGCTGAGG
AAGCTGACCGGCATCCTGAGCGCCGGATGCGAGCGGCCTTCACCGCGTTTGAGGAGGTGCAACT
GCCACGGTTGAAGCAGGAGAACCCCAACATGCGGCTGTCGCAACTGAAGCAGCTGCTGAAGAAG
GAGTGGTTGCGCTCCCCTGACAACCCGATGAACCAGCGCGCCCTGCCCTTTAATGCGCCCAAGT
GACAGAACCAGGCTGAGTCCAGCTTGTCTGAGTCAGCTCATCCCCCTCCAGCCAGGCCTGACCA
GGGATTCATAGAGTTCCGGGCCTGGGATTCTCCCAGCTGCGCCATAGGTCATCCTCAACAACCC
AGAGGGTCCCTGCTCTGACATCCTAGTCCCCGTGAGCCCTGCAGAGCCCAGTGGAGTACCCTCC
CAATAAAGGCTGTGGCGAGGCTGAG

hide sequence

RefSeq Acc Id:

XM_036153949 ⟹ XP_036009842

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	71,320,870 - 71,326,116 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_081240	(Get FASTA)	NCBI Sequence Viewer
	XP_006509718	(Get FASTA)	NCBI Sequence Viewer
	XP_036009842	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH49678	(Get FASTA)	NCBI Sequence Viewer
	AAH50938	(Get FASTA)	NCBI Sequence Viewer
	BAB25123	(Get FASTA)	NCBI Sequence Viewer
	BAC40110	(Get FASTA)	NCBI Sequence Viewer
	EDL28882	(Get FASTA)	NCBI Sequence Viewer
	EDL28883	(Get FASTA)	NCBI Sequence Viewer
	Q9D8X2	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_081240 ⟸ NM_026964

- UniProtKB:

Q9D8X2 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MPKKFQGENSKSAAARARRAEAKAAADAKKQKELEDAYWKDEDKHVMRKEQRKEEKEKRRLEQL
ERKKETQRLLEEEDSRLKGGKAPRVAPAKVTRAQIEDSLRREQRAEPVEKAKSHLELPLEENLN
RRLQEEGSVEARTVEDAIAVLSVAEEADRHPERRMRAAFTAFEEVQLPRLKQENPNMRLSQLKQ
LLKKEWLRSPDNPMNQRALPFNAPK

hide sequence

RefSeq Acc Id:	XP_006509718 ⟸ XM_006509655
- Peptide Label:	isoform X1
- UniProtKB:	Q9D8X2 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MPKKFQGENSKSAAARARRAEAKAAADAKKQKELEDAYWKDEDKHVMRKEQRKEEKEKRRLEQL ERKKETQRLLEEEDSRLKGGKAPRVAPAKVTRAQIEDSLRREQRAEPVEKAKSHLELPLEENLN RRLQEEGSVEARTVEDAIAVLSVAEEADRHPERRMRAAFTAFEEVQLPRLKQENPNMRLSQLKQ LLKKEWLRSPDNPMNQRALPFNAPK hide sequence

RefSeq Acc Id:

ENSMUSP00000007865 ⟸ ENSMUST00000007865

RefSeq Acc Id:

ENSMUSP00000148322 ⟸ ENSMUST00000212680

RefSeq Acc Id:	XP_036009842 ⟸ XM_036153949
- Peptide Label:	isoform X1

Promoters

RGD ID:

8667363

Promoter ID:

EPDNEW_M11713

Type:

multiple initiation site

Name:

Ccdc124_1

Description:

Mus musculus coiled-coil domain containing 124 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	70,873,487 - 70,873,547	EPDNEW

RGD ID:

6842899

Promoter ID:

MM_KWN:54754

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4

Transcripts:

NM_026964

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	73,397,076 - 73,397,852 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1916403	AgrOrtholog
Ensembl Genes	ENSMUSG00000007721	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000007865	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000148322	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000007865	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000212680	UniProtKB/TrEMBL
InterPro	Ccdc124/Oxs1	UniProtKB/Swiss-Prot
KEGG Report	mmu:234388	UniProtKB/Swiss-Prot
MGD	MGI:1916403	ENTREZGENE
NCBI Gene	234388	ENTREZGENE
PANTHER	PTHR21680	UniProtKB/Swiss-Prot
Pfam	Ccdc124	UniProtKB/Swiss-Prot
PhenoGen	Ccdc124	PhenoGen
UniProt	A0A1D5RLD5_MOUSE	UniProtKB/TrEMBL
	CC124_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	Q8C2T0	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)