Isyna1 (myo-inositol 1-phosphate synthase A1) - Rat Genome Database

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Gene: Isyna1 (myo-inositol 1-phosphate synthase A1) Mus musculus
Analyze
Symbol: Isyna1
Name: myo-inositol 1-phosphate synthase A1
RGD ID: 1557022
MGI Page MGI
Description: Predicted to enable inositol-3-phosphate synthase activity. Predicted to be involved in inositol biosynthetic process and negative regulation of inositol biosynthetic process. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be active in cytoplasm. Is expressed in brain; early conceptus; and retina. Orthologous to human ISYNA1 (inositol-3-phosphate synthase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1300017C10Rik; AU018670; inositol-3-phosphate synthase 1; IPS 1; MI-1-P synthase; MIP synthase; myo-inositol-1-phosphate synthase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm4946  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,047,131 - 71,049,940 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl871,047,023 - 71,049,940 (+)EnsemblGRCm39 Ensembl
GRCm38870,594,481 - 70,597,290 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,594,373 - 70,597,290 (+)EnsemblGRCm38mm10GRCm38
MGSCv37873,118,380 - 73,121,189 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36873,523,470 - 73,526,279 (+)NCBIMGSCv36mm8
Celera873,150,596 - 73,153,405 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-hydroxypropanoic acid  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucosamine  (ISO)
all-trans-retinoic acid  (EXP,ISO)
amiodarone  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (EXP)
atrazine  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (ISO)
beta-D-glucosamine  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (EXP)
choline  (EXP)
chromium(6+)  (EXP)
cisplatin  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP,ISO)
diclofenac  (EXP)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (EXP)
fenvalerate  (ISO)
fipronil  (ISO)
flutamide  (ISO)
folic acid  (EXP)
furan  (EXP)
genistein  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
hydrogen cyanide  (EXP)
indometacin  (ISO)
inulin  (EXP)
ivermectin  (ISO)
ketamine  (ISO)
L-ethionine  (ISO)
L-methionine  (EXP)
lipopolysaccharide  (EXP)
lovastatin  (EXP)
naphthalene  (EXP)
nickel atom  (ISO)
nickel sulfate  (ISO)
nimesulide  (ISO)
omeprazole  (ISO)
ozone  (EXP,ISO)
p-toluidine  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
potassium cyanide  (EXP)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenite  (EXP,ISO)
sodium fluoride  (EXP)
streptozocin  (EXP)
tamoxifen  (EXP)
temozolomide  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
tetracycline  (EXP)
thapsigargin  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
triphenyl phosphate  (ISO)
Triptolide  (ISO)
trovafloxacin  (EXP)
valdecoxib  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)
warfarin  (EXP)
zearalenone  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14613899   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16930510  
PMID:18675571   PMID:19188364   PMID:19423573   PMID:21677750   PMID:21873635   PMID:23341629   PMID:31040226   PMID:32325033   PMID:36114006  


Genomics

Comparative Map Data
Isyna1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,047,131 - 71,049,940 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl871,047,023 - 71,049,940 (+)EnsemblGRCm39 Ensembl
GRCm38870,594,481 - 70,597,290 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,594,373 - 70,597,290 (+)EnsemblGRCm38mm10GRCm38
MGSCv37873,118,380 - 73,121,189 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36873,523,470 - 73,526,279 (+)NCBIMGSCv36mm8
Celera873,150,596 - 73,153,405 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.15NCBI
ISYNA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381918,434,388 - 18,438,133 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1918,434,388 - 18,438,167 (-)EnsemblGRCh38hg38GRCh38
GRCh371918,545,198 - 18,548,943 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361918,406,625 - 18,409,943 (-)NCBINCBI36Build 36hg18NCBI36
Celera1918,447,020 - 18,450,933 (-)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1918,108,499 - 18,112,412 (-)NCBIHuRef
CHM1_11918,545,346 - 18,549,259 (-)NCBICHM1_1
T2T-CHM13v2.01918,568,567 - 18,572,312 (-)NCBIT2T-CHM13v2.0
Isyna1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,873,119 - 18,876,116 (-)NCBIGRCr8
mRatBN7.21618,839,143 - 18,841,979 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,839,145 - 18,841,979 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1618,880,839 - 18,883,671 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01620,013,623 - 20,016,455 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,933,801 - 18,936,633 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01620,589,497 - 20,592,333 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,589,481 - 20,592,449 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,445,206 - 20,448,042 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,345,305 - 19,348,141 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11619,345,311 - 19,348,054 (-)NCBI
Celera1619,030,610 - 19,033,446 (-)NCBICelera
Cytogenetic Map16p14NCBI
Isyna1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555243,098,995 - 3,100,454 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555243,099,017 - 3,100,454 (+)NCBIChiLan1.0ChiLan1.0
ISYNA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22023,295,288 - 23,299,230 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11922,303,623 - 22,307,529 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01917,913,400 - 17,916,789 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11918,884,406 - 18,887,931 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1918,884,412 - 18,887,931 (-)Ensemblpanpan1.1panPan2
ISYNA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12044,594,816 - 44,598,495 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2044,489,219 - 44,598,497 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2044,509,230 - 44,512,910 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02045,080,806 - 45,084,487 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2044,999,052 - 45,085,082 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12044,318,111 - 44,321,783 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02044,728,243 - 44,731,923 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02045,003,669 - 45,007,342 (+)NCBIUU_Cfam_GSD_1.0
Isyna1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,266,570 - 203,269,890 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365962,815,821 - 2,819,020 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365962,815,782 - 2,819,100 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ISYNA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl259,363,716 - 59,367,002 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1259,363,672 - 59,367,003 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ISYNA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1616,906,724 - 16,910,194 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl616,905,472 - 16,910,030 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660742,431,203 - 2,435,020 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Isyna1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249081,658,512 - 1,661,640 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249081,658,512 - 1,661,507 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Isyna1
43 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:132
Count of miRNA genes:129
Interacting mature miRNAs:132
Transcripts:ENSMUST00000019283
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3250657271740637Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84474791478748059Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84809006482090180Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84819016882190288Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85050595884505958Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85913640493136404Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86151347995513605Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6418673698186736Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86466617698666325Mouse
11039503Ccc4_mcolitis susceptibility in the Collaborative Cross 4 (mouse)86517423778002730Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86872247983326976Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined871032003105032123Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse

Markers in Region
RH126908  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,597,031 - 70,597,280UniSTSGRCm38
MGSCv37873,120,930 - 73,121,179UniSTSGRCm37
Celera873,153,146 - 73,153,395UniSTS
Cytogenetic Map8B3.3UniSTS
Whitehead/MRC_RH8743.88UniSTS
RH136244  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,597,067 - 70,597,267UniSTSGRCm38
MGSCv37873,120,966 - 73,121,166UniSTSGRCm37
Celera873,153,182 - 73,153,382UniSTS
Cytogenetic Map8B3.3UniSTS
RH129421  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,597,104 - 70,597,275UniSTSGRCm38
MGSCv37873,121,003 - 73,121,174UniSTSGRCm37
Celera873,153,219 - 73,153,390UniSTS
Cytogenetic Map8B3.3UniSTS
Isyna1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,595,821 - 70,596,121UniSTSGRCm38
MGSCv37873,119,720 - 73,120,020UniSTSGRCm37
Celera873,151,936 - 73,152,236UniSTS
Cytogenetic Map8B3.3UniSTS
cM Map8 UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000019283   ⟹   ENSMUSP00000019283
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,047,131 - 71,049,938 (+)Ensembl
GRCm38.p6 Ensembl870,594,481 - 70,597,288 (+)Ensembl
RefSeq Acc Id: ENSMUST00000209285   ⟹   ENSMUSP00000147836
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,047,123 - 71,049,841 (+)Ensembl
GRCm38.p6 Ensembl870,594,473 - 70,597,191 (+)Ensembl
RefSeq Acc Id: ENSMUST00000209751
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,047,705 - 71,048,504 (+)Ensembl
GRCm38.p6 Ensembl870,595,055 - 70,595,854 (+)Ensembl
RefSeq Acc Id: ENSMUST00000210005   ⟹   ENSMUSP00000148077
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,047,131 - 71,049,940 (+)Ensembl
GRCm38.p6 Ensembl870,594,481 - 70,597,290 (+)Ensembl
RefSeq Acc Id: ENSMUST00000210358
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,047,123 - 71,047,973 (+)Ensembl
GRCm38.p6 Ensembl870,594,473 - 70,595,323 (+)Ensembl
RefSeq Acc Id: ENSMUST00000210878
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,047,140 - 71,049,938 (+)Ensembl
GRCm38.p6 Ensembl870,594,490 - 70,597,288 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211117   ⟹   ENSMUSP00000148101
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,047,023 - 71,047,813 (+)Ensembl
GRCm38.p6 Ensembl870,594,373 - 70,595,163 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211501   ⟹   ENSMUSP00000147430
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,047,377 - 71,048,407 (+)Ensembl
GRCm38.p6 Ensembl870,594,727 - 70,595,757 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211773
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl871,048,617 - 71,049,417 (+)Ensembl
GRCm38.p6 Ensembl870,595,967 - 70,596,767 (+)Ensembl
RefSeq Acc Id: NM_023627   ⟹   NP_076116
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,047,131 - 71,049,940 (+)NCBI
GRCm38870,594,481 - 70,597,290 (+)ENTREZGENE
MGSCv37873,118,380 - 73,121,189 (+)RGD
Celera873,150,596 - 73,153,405 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_076116   ⟸   NM_023627
- UniProtKB: Q9JHU9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000147430   ⟸   ENSMUST00000211501
RefSeq Acc Id: ENSMUSP00000148101   ⟸   ENSMUST00000211117
RefSeq Acc Id: ENSMUSP00000148077   ⟸   ENSMUST00000210005
RefSeq Acc Id: ENSMUSP00000019283   ⟸   ENSMUST00000019283
RefSeq Acc Id: ENSMUSP00000147836   ⟸   ENSMUST00000209285

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JHU9-F1-model_v2 AlphaFold Q9JHU9 1-557 view protein structure

Promoters
RGD ID:8667369
Promoter ID:EPDNEW_M11693
Type:initiation region
Name:Isyna1_1
Description:Mus musculus myo-inositol 1-phosphate synthase A1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38870,594,505 - 70,594,565EPDNEW
RGD ID:6843341
Promoter ID:MM_KWN:54721
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_023627,   UC009MAW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,117,491 - 73,118,527 (+)MPROMDB
RGD ID:6848309
Promoter ID:MM_ACW:47842
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Lung
Transcripts:ISYNA1.CSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,119,221 - 73,120,212 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919030 AgrOrtholog
Ensembl Genes ENSMUSG00000019139 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000019283 ENTREZGENE
  ENSMUST00000019283.10 UniProtKB/Swiss-Prot
  ENSMUST00000209285.2 UniProtKB/TrEMBL
  ENSMUST00000210005.2 UniProtKB/Swiss-Prot
  ENSMUST00000211117.2 UniProtKB/TrEMBL
  ENSMUST00000211501.2 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Myo-inos-1-P_Synthase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myo-inos-1-P_Synthase_GAPDH UniProtKB/Swiss-Prot
  NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:71780 UniProtKB/Swiss-Prot
MGD MGI:1919030 ENTREZGENE
NCBI Gene 71780 ENTREZGENE
PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11510 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Inos-1-P_synth UniProtKB/Swiss-Prot
  NAD_binding_5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Isyna1 PhenoGen
PIRSF Myoinos-ppht_syn UniProtKB/Swiss-Prot
Superfamily-SCOP Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain UniProtKB/Swiss-Prot
  SSF51735 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1B0GR94_MOUSE UniProtKB/TrEMBL
  A0A1B0GS86_MOUSE UniProtKB/TrEMBL
  A0A1B0GSW6_MOUSE UniProtKB/TrEMBL
  INO1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE