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Gene: Hmgxb4 (HMG box domain containing 4) Mus musculus

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Symbol:

Hmgxb4

Name:

HMG box domain containing 4

RGD ID:

1314022

MGI Page

MGI

Description:

Predicted to enable identical protein binding activity. Predicted to be part of NURF complex. Is expressed in several structures, including aorta; central nervous system; early conceptus; gonad; and thymus. Orthologous to human HMGXB4 (HMG-box containing 4).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

4733401K04Rik; AI316803; E430025G12; high mobility group box 2-like 1; HMG domain-containing protein 4; Hmgb2l; Hmgb2l1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HMGXB4 (HMG-box containing 4)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Hmgxb4 (HMG-box containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Hmgxb4 (HMG-box containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	HMGXB4 (HMG-box containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	HMGXB4 (HMG-box containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hmgxb4 (HMG-box containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	HMGXB4 (HMG-box containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	HMGXB4 (HMG-box containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Hmgxb4 (HMG-box containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Hmgxb4 (HMG-box containing 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	HMGXB4 (HMG-box containing 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	hmgxb4a (HMG box domain containing 4a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Danio rerio (zebrafish):	hmgxb4b (HMG box domain containing 4b)	Alliance	DIOPT (ZFIN)
Drosophila melanogaster (fruit fly):	CG4617	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	hmgxb4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	75,719,984 - 75,758,606 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	74,993,650 - 75,031,978 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	74,993,356 - 75,031,978 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	77,517,602 - 77,555,871 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	77,889,775 - 77,928,044 (+)	NCBI		MGSCv36	mm8
Celera	8	79,293,778 - 79,332,024 (+)	NCBI		Celera
Cytogenetic Map	8	C1	NCBI
cM Map	8	35.57	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Hmgxb4	Mouse	(1->4)-beta-D-glucan	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of HMGXB4 mRNA	CTD	PMID:36331819
Hmgxb4	Mouse	1,2-dichloroethane	increases expression	EXP		6480464	ethylene dichloride results in increased expression of HMGXB4 mRNA	CTD	PMID:28189721\|PMID:28960355
Hmgxb4	Mouse	1,2-dimethylhydrazine	increases expression	EXP		6480464	1,2-Dimethylhydrazine results in increased expression of HMGXB4 mRNA	CTD	PMID:22206623
Hmgxb4	Mouse	17alpha-ethynylestradiol	multiple interactions	EXP		6480464	[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of HMGXB4 mRNA	CTD	PMID:17942748
Hmgxb4	Mouse	2,3,7,8-tetrachlorodibenzodioxine	multiple interactions	EXP		6480464	[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of HMGXB4 mRNA	CTD	PMID:17942748
Hmgxb4	Mouse	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of HMGXB4 mRNA	CTD	PMID:21570461
Hmgxb4	Mouse	acrolein	multiple interactions	ISO	RGD:1314021	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of more ...	CTD	PMID:32699268
Hmgxb4	Mouse	acrylamide	decreases expression	ISO	RGD:1305783	6480464	Acrylamide results in decreased expression of HMGXB4 mRNA	CTD	PMID:28959563
Hmgxb4	Mouse	acrylamide	decreases expression	ISO	RGD:1314021	6480464	Acrylamide results in decreased expression of HMGXB4 mRNA	CTD	PMID:32763439
Hmgxb4	Mouse	all-trans-retinoic acid	decreases expression	ISO	RGD:1314021	6480464	Tretinoin results in decreased expression of HMGXB4 mRNA	CTD	PMID:33167477
Hmgxb4	Mouse	alpha-pinene	multiple interactions	ISO	RGD:1314021	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of more ...	CTD	PMID:32699268
Hmgxb4	Mouse	amiodarone	increases expression	ISO	RGD:1314021	6480464	Amiodarone results in increased expression of HMGXB4 mRNA	CTD	PMID:19774075
Hmgxb4	Mouse	aristolochic acid A	decreases expression	ISO	RGD:1314021	6480464	aristolochic acid I results in decreased expression of HMGXB4 mRNA	CTD	PMID:33212167
Hmgxb4	Mouse	benzo[a]pyrene	increases expression	EXP		6480464	Benzo(a)pyrene results in increased expression of HMGXB4 mRNA	CTD	PMID:22228805
Hmgxb4	Mouse	benzo[a]pyrene	affects methylation	ISO	RGD:1314021	6480464	Benzo(a)pyrene affects the methylation of HMGXB4 promoter	CTD	PMID:27901495
Hmgxb4	Mouse	benzo[a]pyrene diol epoxide I	decreases expression	ISO	RGD:1314021	6480464	7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in decreased expression of HMGXB4 mRNA	CTD	PMID:20382639
Hmgxb4	Mouse	benzo[a]pyrene diol epoxide I	increases expression	ISO	RGD:1314021	6480464	7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in increased expression of HMGXB4 mRNA	CTD	PMID:26238291
Hmgxb4	Mouse	bisphenol A	decreases expression	ISO	RGD:1305783	6480464	bisphenol A results in decreased expression of HMGXB4 mRNA	CTD	PMID:25181051
Hmgxb4	Mouse	bisphenol A	increases methylation	ISO	RGD:1305783	6480464	bisphenol A results in increased methylation of HMGXB4 gene	CTD	PMID:28505145
Hmgxb4	Mouse	cadmium dichloride	increases expression	ISO	RGD:1314021	6480464	Cadmium Chloride results in increased expression of HMGXB4 mRNA	CTD	PMID:26472689
Hmgxb4	Mouse	caffeine	affects phosphorylation	ISO	RGD:1314021	6480464	Caffeine affects the phosphorylation of HMGXB4 protein	CTD	PMID:35688186
Hmgxb4	Mouse	CGP 52608	multiple interactions	ISO	RGD:1314021	6480464	CGP 52608 promotes the reaction [RORA protein binds to HMGXB4 gene]	CTD	PMID:28238834
Hmgxb4	Mouse	chlorpyrifos	decreases expression	EXP		6480464	Chlorpyrifos results in decreased expression of HMGXB4 mRNA	CTD	PMID:37019170
Hmgxb4	Mouse	coumarin	decreases phosphorylation	ISO	RGD:1314021	6480464	coumarin results in decreased phosphorylation of HMGXB4 protein	CTD	PMID:35688186
Hmgxb4	Mouse	cyclosporin A	increases expression	ISO	RGD:1314021	6480464	Cyclosporine results in increased expression of HMGXB4 mRNA	CTD	PMID:25562108
Hmgxb4	Mouse	DDE	increases expression	ISO	RGD:1314021	6480464	Dichlorodiphenyl Dichloroethylene results in increased expression of HMGXB4 mRNA	CTD	PMID:38568856
Hmgxb4	Mouse	decabromodiphenyl ether	decreases expression	ISO	RGD:1305783	6480464	decabromobiphenyl ether results in decreased expression of HMGXB4 mRNA	CTD	PMID:23640034
Hmgxb4	Mouse	Dibutyl phosphate	affects expression	ISO	RGD:1314021	6480464	di-n-butylphosphoric acid affects the expression of HMGXB4 mRNA	CTD	PMID:37042841
Hmgxb4	Mouse	diuron	decreases expression	ISO	RGD:1305783	6480464	Diuron results in decreased expression of HMGXB4 mRNA	CTD	PMID:25152437
Hmgxb4	Mouse	doxorubicin	decreases expression	ISO	RGD:1314021	6480464	Doxorubicin results in decreased expression of HMGXB4 mRNA	CTD	PMID:29803840
Hmgxb4	Mouse	elemental selenium	multiple interactions	ISO	RGD:1314021	6480464	[Selenium co-treated with Vitamin E] results in decreased expression of HMGXB4 mRNA	CTD	PMID:19244175
Hmgxb4	Mouse	elemental selenium	decreases expression	ISO	RGD:1314021	6480464	Selenium results in decreased expression of HMGXB4 mRNA	CTD	PMID:19244175
Hmgxb4	Mouse	fenvalerate	increases expression	ISO	RGD:1305783	6480464	fenvalerate results in increased expression of HMGXB4 mRNA	CTD	PMID:30307764
Hmgxb4	Mouse	formaldehyde	decreases expression	ISO	RGD:1314021	6480464	Formaldehyde results in decreased expression of HMGXB4 mRNA	CTD	PMID:20655997
Hmgxb4	Mouse	FR900359	affects phosphorylation	ISO	RGD:1314021	6480464	FR900359 affects the phosphorylation of HMGXB4 protein	CTD	PMID:37730182
Hmgxb4	Mouse	gentamycin	decreases expression	ISO	RGD:1305783	6480464	Gentamicins results in decreased expression of HMGXB4 mRNA	CTD	PMID:33387578
Hmgxb4	Mouse	geraniol	decreases expression	ISO	RGD:1314021	6480464	geraniol results in decreased expression of HMGXB4 mRNA	CTD	PMID:27683099
Hmgxb4	Mouse	GSK-J4	increases expression	ISO	RGD:1314021	6480464	GSK-J4 results in increased expression of HMGXB4 mRNA	CTD	PMID:29301935
Hmgxb4	Mouse	hydralazine	multiple interactions	ISO	RGD:1314021	6480464	[Hydralazine co-treated with Valproic Acid] results in increased expression of HMGXB4 mRNA	CTD	PMID:17183730
Hmgxb4	Mouse	leflunomide	increases expression	ISO	RGD:1314021	6480464	leflunomide results in increased expression of HMGXB4 mRNA	CTD	PMID:28988120
Hmgxb4	Mouse	ozone	multiple interactions	ISO	RGD:1314021	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of more ...	CTD	PMID:32699268
Hmgxb4	Mouse	paracetamol	affects expression	EXP		6480464	Acetaminophen affects the expression of HMGXB4 mRNA	CTD	PMID:17562736
Hmgxb4	Mouse	perfluorooctane-1-sulfonic acid	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of HMGXB4 mRNA	CTD	PMID:36331819
Hmgxb4	Mouse	phenobarbital	affects expression	EXP		6480464	Phenobarbital affects the expression of HMGXB4 mRNA	CTD	PMID:23091169
Hmgxb4	Mouse	pirinixic acid	multiple interactions	EXP		6480464	[pirinixic acid binds to and results in increased activity of PPARA protein] which results in more ...	CTD	PMID:19710929
Hmgxb4	Mouse	selenium atom	multiple interactions	ISO	RGD:1314021	6480464	[Selenium co-treated with Vitamin E] results in decreased expression of HMGXB4 mRNA	CTD	PMID:19244175
Hmgxb4	Mouse	selenium atom	decreases expression	ISO	RGD:1314021	6480464	Selenium results in decreased expression of HMGXB4 mRNA	CTD	PMID:19244175
Hmgxb4	Mouse	sodium arsenite	increases expression	EXP		6480464	sodium arsenite results in increased expression of HMGXB4 mRNA	CTD	PMID:32068019
Hmgxb4	Mouse	sodium fluoride	decreases expression	EXP		6480464	Sodium Fluoride results in decreased expression of HMGB2L1 mRNA	CTD	PMID:27862939
Hmgxb4	Mouse	Soman	decreases expression	ISO	RGD:1305783	6480464	Soman results in decreased expression of HMGXB4 mRNA	CTD	PMID:19281266
Hmgxb4	Mouse	thiram	increases expression	ISO	RGD:1314021	6480464	Thiram results in increased expression of HMGXB4 mRNA	CTD	PMID:38568856
Hmgxb4	Mouse	titanium dioxide	increases methylation	EXP		6480464	titanium dioxide results in increased methylation of HMGXB4 gene	CTD	PMID:35295148
Hmgxb4	Mouse	tungsten	decreases expression	EXP		6480464	Tungsten results in decreased expression of HMGXB4 mRNA	CTD	PMID:30912803
Hmgxb4	Mouse	valproic acid	decreases methylation	ISO	RGD:1314021	6480464	Valproic Acid results in decreased methylation of HMGXB4 gene	CTD	PMID:29154799
Hmgxb4	Mouse	valproic acid	decreases expression	EXP		6480464	Valproic Acid results in decreased expression of HMGXB4 mRNA	CTD	PMID:21427059
Hmgxb4	Mouse	valproic acid	multiple interactions	ISO	RGD:1314021	6480464	[Hydralazine co-treated with Valproic Acid] results in increased expression of HMGXB4 mRNA	CTD	PMID:17183730
Hmgxb4	Mouse	valproic acid	affects expression	ISO	RGD:1314021	6480464	Valproic Acid affects the expression of HMGXB4 mRNA	CTD	PMID:25979313
Hmgxb4	Mouse	valproic acid	decreases expression	ISO	RGD:1314021	6480464	Valproic Acid results in decreased expression of HMGXB4 mRNA	CTD	PMID:23179753\|PMID:25192806
Hmgxb4	Mouse	vitamin E	multiple interactions	ISO	RGD:1314021	6480464	[Selenium co-treated with Vitamin E] results in decreased expression of HMGXB4 mRNA	CTD	PMID:19244175
Hmgxb4	Mouse	vitamin E	decreases expression	ISO	RGD:1314021	6480464	Vitamin E results in decreased expression of HMGXB4 mRNA	CTD	PMID:19244175

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Hmgxb4	Mouse	NURF complex	part_of	ISO	UniProtKB:Q9UGU5	2290270		GO_Central	GO_REF:0000119

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Hmgxb4	Mouse	identical protein binding	enables	ISO	UniProtKB:Q9UGU5	2290270		GO_Central	GO_REF:0000119
Hmgxb4	Mouse	protein binding	enables	ISO	UniProtKB:O75928-2\|UniProtKB:Q02040\|UniProtKB:Q6ZUT1\|UniProtKB:Q7KZS0\|UniProtKB:Q8TBK6\|UniProtKB:Q8TD31-3\|UniProtKB:Q96A09\|UniProtKB:Q96MF2\|UniProtKB:Q96PV6\|UniProtKB:Q96SI9\|UniProtKB:Q9BZL1\|UniProtKB:Q9C086\|UniProtKB:Q9H0I2\|UniProtKB:Q9H2G4	9068941	PMID:32296183	IntAct	PMID:32296183

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Hmgxb4	Mouse	decreased macrophage nitric oxide production		IAGP		5509061		MGI	PMID:33563757
Hmgxb4	Mouse	decreased susceptibility to endotoxin shock		IAGP		5509061		MGI	PMID:33563757
Hmgxb4	Mouse	decreased susceptibility to induced morbidity/mortality		IAGP		5509061		MGI	PMID:33563757
Hmgxb4	Mouse	decreased vascular permeability		IAGP		5509061		MGI	PMID:33563757
Hmgxb4	Mouse	no abnormal phenotype detected		IAGP		5509061		MGI	PMID:33563757

#	Reference Title	Reference Citation
1.	Mouse brain organization revealed through direct genome-scale TF expression analysis.	Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8889548	PMID:10349636	PMID:10725249	PMID:11042159	PMID:11076861	PMID:12477932	PMID:12520002	PMID:14610273	PMID:16141072	PMID:16141073	PMID:18287559	PMID:18799693
PMID:20412781	PMID:20511232	PMID:20657840	PMID:20932939	PMID:21677750	PMID:24952961	PMID:26919559	PMID:33563757	PMID:38644513

Hmgxb4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	75,719,984 - 75,758,606 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	74,993,650 - 75,031,978 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	74,993,356 - 75,031,978 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	77,517,602 - 77,555,871 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	77,889,775 - 77,928,044 (+)	NCBI		MGSCv36	mm8
Celera	8	79,293,778 - 79,332,024 (+)	NCBI		Celera
Cytogenetic Map	8	C1	NCBI
cM Map	8	35.57	NCBI

HMGXB4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	35,241,536 - 35,295,807 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	35,257,452 - 35,295,807 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	35,653,486 - 35,691,800 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	33,983,489 - 34,021,800 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	33,978,042 - 34,016,353	NCBI
Celera	22	19,456,143 - 19,494,488 (+)	NCBI		Celera
Cytogenetic Map	22	q12.3	NCBI
HuRef	22	18,614,585 - 18,652,914 (+)	NCBI		HuRef
CHM1_1	22	35,611,632 - 35,649,991 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	35,700,425 - 35,753,698 (+)	NCBI		T2T-CHM13v2.0

Hmgxb4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	13,370,559 - 13,409,306 (+)	NCBI		GRCr8
mRatBN7.2	19	13,364,741 - 13,403,563 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	13,364,807 - 13,403,563 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	13,339,216 - 13,377,847 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	14,104,482 - 14,143,116 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	13,385,453 - 13,423,956 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	14,352,644 - 14,390,499 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	14,352,411 - 14,390,478 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	25,465,000 - 25,503,030 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	13,849,919 - 13,888,570 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	13,854,655 - 13,891,682 (+)	NCBI
Celera	19	13,234,389 - 13,272,937 (+)	NCBI		Celera
Cytogenetic Map	19	p11	NCBI

Hmgxb4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	43,062,093 - 43,091,784 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	43,058,768 - 43,088,592 (+)	NCBI	ChiLan1.0	ChiLan1.0

HMGXB4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	45,198,137 - 45,236,461 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	47,894,830 - 47,933,154 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	16,264,268 - 16,302,597 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	34,108,030 - 34,146,282 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	34,112,944 - 34,144,132 (+)	Ensembl	panpan1.1		panPan2

HMGXB4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	28,826,760 - 28,857,473 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	28,828,362 - 28,857,458 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	28,763,052 - 28,793,717 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	29,613,371 - 29,644,058 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	29,613,377 - 29,644,081 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	29,336,946 - 29,367,598 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	29,645,744 - 29,676,406 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	29,825,457 - 29,856,123 (-)	NCBI		UU_Cfam_GSD_1.0

Hmgxb4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	12,096,746 - 12,129,409 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	5,109,271 - 5,135,186 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	5,106,230 - 5,139,784 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HMGXB4
(Sus scrofa - pig)

No map positions available.

HMGXB4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	18,020,514 - 18,058,769 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	18,020,614 - 18,060,515 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	107,890,766 - 107,929,850 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hmgxb4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624750	382,057 - 409,259 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Hmgxb4
2876 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	3389
Count of miRNA genes:	830
Interacting mature miRNAs:	1111
Transcripts:	ENSMUST00000041759, ENSMUST00000109940, ENSMUST00000129391, ENSMUST00000133585, ENSMUST00000134126, ENSMUST00000145919, ENSMUST00000151062
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10043992	Hbnr11_m	Heligmosomoides bakeri nematode resistance 11 (mouse)			Not determined		8	66326836	100326976	Mouse
1301013	Capsq4_m	capsaicin sensitivity related QTL 4 (mouse)			Not determined		8	36630154	93455280	Mouse
1301717	Adip4_m	adiposity 4 (mouse)			Not determined		8	48090064	82090180	Mouse
1357715	Alaa3_m	alopecia areata 3 (mouse)			Not determined		8	49245591	83245673	Mouse
11353828	Gf7_m	gonadal fat pad weight 7 (mouse)					8	58928107	92928107	Mouse
14746987	Manh64_m	mandible shape 64 (mouse)					8	50505958	84505958	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	35109930	115563747	Mouse
1357787	Vtbt5_m	vertebral trabecular bone trait 5 (mouse)			Not determined		8	66084397	100084549	Mouse
10766453	Char11_m	P. chabaudi malaria resistance QTL 11 (mouse)					8	48090064	82090180	Mouse
1301506	Aevm1_m	autoimmune extremity vasculitis in MRL mice 1 (mouse)			Not determined		8	54740461	88740637	Mouse
1301441	Skull11_m	skull morphology 11 (mouse)			Not determined		8	48190168	82190288	Mouse
1301952	Im3_m	immunoregulatory 3 (mouse)			Not determined		8	55159258	89159407	Mouse
1301767	Fcsa2_m	femoral cross-sectional area 2 (mouse)			Not determined		8	71032003	105032123	Mouse
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32506572	117965439	Mouse
1357708	Orq1_m	ovulation rate QTL 1 (mouse)			Not determined		8	71740461	124622354	Mouse
4141285	Tgq18_m	triglyceride QTL 18 (mouse)			Not determined			64186736	98186736	Mouse
4141797	Skmw16_m	skeletal muscle weight 16 (mouse)			Not determined		8	64666176	98666325	Mouse
14747005	Mancz7_m	mandible centroid size 7 (mouse)					8	50505958	84505958	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37867154	110326632	Mouse
10043975	Obq31_m	obesity QTL 31 (mouse)			Not determined		8	59136404	93136404	Mouse
10412287	Carg3_m	Candida albicans resistance gene 3 (mouse)			Not determined		8	56298872	90298872	Mouse
1301872	Cd4ts3_m	CD4 T cell subset 3 (mouse)			Not determined		8	72122809	106123021	Mouse
10766466	Char12_m	P. chabaudi malaria resistance QTL 12 (mouse)					8	68722479	83326976	Mouse
11039503	Ccc4_m	colitis susceptibility in the Collaborative Cross 4 (mouse)					8	65174237	78002730	Mouse
1301688	Orch6_m	autoimmune orchitis resistance 6 (mouse)			Not determined		8	61513479	95513605	Mouse
1558780	Idd22_m	insulin dependent diabetes susceptibility 22 (mouse)			Not determined		8	71829531	105829637	Mouse
1300920	Pitm3_m	prion incubation time 3 (mouse)			Not determined		8	73929123	107929226	Mouse
12904744	Carcdq1_m	cardiac collagen deposition QTL 1 (mouse)					8	40162297	95416226	Mouse
4141395	Char2a_m	P. chabaudi malaria resistance QTL 2a (mouse)			Not determined			71589427	90929226	Mouse
14700686	Civq3_m	cerebral infarct volume QTL 3 (mouse)					8	52334843	86334843	Mouse
4142283	Imraq2_m	immune response to AAV2 QTL 2 (mouse)			Not determined		8	71032003	105032123	Mouse
27095912	Pglq14_m	pelvic girdle length QTL 14, 16 week (mouse)					8	74126628	126826739	Mouse
4142023	W3q5_m	weight 3 weeks QTL 5 (mouse)			Not determined			71740461	124622354	Mouse
1301544	Iba3_m	induction of brown adipocytes 3 (mouse)			Not determined		8	44747914	78748059	Mouse

RH136122

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	8	75,002,179 - 75,002,383	UniSTS	GRCm38
MGSCv37	8	77,526,078 - 77,526,282	UniSTS	GRCm37
Celera	8	79,302,254 - 79,302,458	UniSTS
Cytogenetic Map	8	C1	UniSTS

D8Mit180

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	8	75,007,384 - 75,007,530	UniSTS	GRCm38
MGSCv37	8	77,531,283 - 77,531,429	UniSTS	GRCm37
Celera	8	79,307,461 - 79,307,597	UniSTS
Cytogenetic Map	8	C1	UniSTS
cM Map	8	34.0	UniSTS
Whitehead Genetic	8	36.1	UniSTS
Whitehead_YAC	8		UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NM_001316753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001316754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_178017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK014640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK088758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK156670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL603864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC006036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC023167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC023721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC048188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC049800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY035054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CN456159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000041759 ⟹ ENSMUSP00000045126

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,719,984 - 75,758,600 (+)	Ensembl
GRCm38.p6 Ensembl	8	74,993,356 - 75,031,972 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000109940 ⟹ ENSMUSP00000105566

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,742,850 - 75,758,541 (+)	Ensembl
GRCm38.p6 Ensembl	8	75,016,222 - 75,031,913 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000129391

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,749,483 - 75,750,704 (+)	Ensembl
GRCm38.p6 Ensembl	8	75,022,855 - 75,024,076 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000133585

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,720,340 - 75,727,412 (+)	Ensembl
GRCm38.p6 Ensembl	8	74,993,712 - 75,000,784 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000134126

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,720,319 - 75,725,848 (+)	Ensembl
GRCm38.p6 Ensembl	8	74,993,691 - 74,999,220 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000145919 ⟹ ENSMUSP00000133586

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,720,307 - 75,758,606 (+)	Ensembl
GRCm38.p6 Ensembl	8	74,993,679 - 75,031,978 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000151062

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,720,307 - 75,726,426 (+)	Ensembl
GRCm38.p6 Ensembl	8	74,993,679 - 74,999,798 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000211863 ⟹ ENSMUSP00000148561

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,720,323 - 75,727,506 (+)	Ensembl
GRCm38.p6 Ensembl	8	74,993,695 - 75,000,878 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000212372

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	75,726,497 - 75,727,936 (+)	Ensembl
GRCm38.p6 Ensembl	8	74,999,869 - 75,001,308 (+)	Ensembl

RefSeq Acc Id:

NM_001316753 ⟹ NP_001303682

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI
GRCm38	8	74,993,650 - 75,031,978 (+)	NCBI

Sequence:

show sequence

GGCTCGACTGAGGCGCCCTTGTTGCTCGCGCTTTTCTCTCCTTCTCCAAGATGGCGGCCGTCGGCGGCGCTGAGGCGGGATCCGAGCGAGCCGAGTGAAGACCTGGTCCTGTAGACGGGAAGGAGCCT
GGACACAGTGACACAACACATTCTCAAAGGCCCTGCAGGACCACCATGGCTTATGATGACTCCATGAAGAAAGAAGATTGCTTTGATGGTGATCACAGCTTTGAGGACATAGGACTTGCAGCTGGCCG
AAGCCAACGAGAAAAGAAGCGGTCTTACAAAGACTTCTTAAGGGAAGAGGAAGAAGTCGCCGCGCAGGTCAGGAGCTCTTCCAAGAAGAAGTCAAAGGACAGTGATTTGTTCTTCTTGGGGACGGACA
CACACAAGAAGAAGAGGAAGCACTCCCCTGACGATTACTACTATGGAGGACAGTGGTTCTTGTTCTGAGTGCCGATAAACCAGTGTGAAGGAGGAGAGAGGTGGAGGGCTGGTATTTTGGAGGATTCA
GCATAGAAGAACAGTCTTCATTTGTGATACACAAGACATTTCGACTTTGGAATCATCACAGAAGAAAAAGAAGAAGTCTAGCCCACAGTCTCCGGACACAGCAATGGACCTGTTGAAAGCTATCACCT
CCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCC
CTGGATGACAGCAATGCCCACAAATCCAAAAAGATGAAGCCACTCTATGTGAACACAGAGACACTGACTCTTCGTGAGCCAGATGGCTTAAAGATGAAACTCATTCTCTCACCAAAGGAGAAGGGAAG
CAGCTCAGTGGAAGAGGAGGCTTTTCAGTACCCTGCCCAACAAGCTTCGCTGAAGAAGCCCTCGAAGAAACTAGCTCGGGACGAGCAAGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCTCCTGA
AAACGGCCCGGAAGAAGCACAAGTCATCCTCAGACTCACACTCCTCTCCTGGCCCAGAAGGCTGTGGGTCTGACGTCTCCCAGCTTCCAGAACCCCACAGTGCCAATCTCGACATCACAGGGCTTGAC
CCAATTCTAGTAGAGTCCGAATCGTCCTCAGCTGGGGAGCTGGAGGCCGGGGAGCTGGTGATAGATGACTCTTACAGGGAGATCAAGAAGAAGAAGAAGTCAAAAAAGAGCAAAAAGAAGAAGGACAA
AGACAGACACAAGGAGAAGCGGCACTCCCGGACCAAGAGAAGCTCTGCCAGAGAGCACGGTACTGCTCGGGAGCACGGGCTGATACCTGGCCCTGCCTCCAGTGTCCCCACCCTGCCACTTCCTGCTC
TACACACAGATGGACACGGGGAGAAGAAAAAGAAAAGGGAAGACAAAGACAGAGACAGAGAGAGGGGAGAAAAGCCGAAAAAGAAGAACATGTCTGCCTACCAGGTATTCTGTAAGGAGTACCGGGTA
ACCATTGTGGCTGACCATCCAGGTATAGATTTTGGGGAACTTAGTAAAAAATTGGCTGAAGTATGGAAGCAGTTGCCAGAAAAAGACAAACTGATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAA
ACAGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTCCATGAAAGTCAGAGCCTCTTCTGTAGGAGTACTGTCACCCCAAAAGAAGTCCCCACCCACCACAATGCTTT
TGCCAGCCTCACCAGCCAAAGCTCCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCCCTCAGCCTCATTGGACACCGCCTACAGGAGACAGAGGGCATGGTGGCAGTG
TCTGGAAGCTTGTCAGTGCTCCTAGATTCCATTATCTGTGCTCTTGGCCCTCTGGCATGCCTGACCACACAACTACCTGAACTGAACGGCTGTCCTAAACAGGTCTTGTCAAACACGCTGGACAACAT
TGCATACATTATGCCTGGACTGTGACTTCCAAGACGCCTGGGACAGAAGACTGTCTACCCCTTCGCTAGTCTATGTATAGATGACTGTTCCAGACCCTCCACTGACCTCTGGGTGTAGGTTTTAAATT
TTTATAATCTATATATACGTATATAATGTACAGTATATACATAGGATATAACTACTTTGCTTTTAATAATTTTATGAAATGGCAAAGGTTTAGCTAAAAGGAAACTTTAGCATGAATGTGGGCTTGGA
ATTATTTTTTTGTGAAAAAAAAATCTGCCTTAAAAAAAATCAGTGTAATTTGGGGACTAGGGGCTTATTCTGGGTGCCATGTATATCTCCTCATAGACTGCTAAAATGTGATTTTTTTTTTTTTTCCA
AGCTTGGGTTTACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGGTGG
GGAGGTGGAGCTTAGGTGGACTGGGTAGGGGACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACCACGGTTCCACAGAGTCATCGGTACCATCTATAGCCTCAGCTAT
GTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCA
GCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTACATTGTGCTCTGCATTCCACACAGAGCTGGATCACAAAGAAGT
TCTTGGTTCTCAGGAGGGTTATCTATATGTGCGTGTGAGTGTATATTTTAATTATGTGTATTTAACTCTTTAGAATTTCTTAGATTTTAATTTATCCTGTAAATTTCTGTATATATAATTTAATAACA
AGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATATGTTAAGGTGTTGTGACTCAGAAAGGAACTTCATGGCCCTCAATAATG
TTAGGAAAGTGAAATAGAAAGGAATGTCACCATTCCTAATTTCCCTTATTCCCAAAGACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAG
ATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAACCATGCTTTCTTCTAATGGCCTGGATGGAACGAGGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCC
TTCCCATAGCCCGACTGCTGTCACAGCTAAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGAAATAGGGAAAGGAACAGAAATATGTGGGAACTGAAATCAAGCAGAG
CAGAAATTTCCATTTGAGTTAACATGTCAGAACCTCATTTGACCCTGCAGAAGTTTCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTG
CCCTTGCTACAGACAGTAGTGAACTCCTAAGGAGAACCGGCTTTTTCGGGTTTGTTTTCCTCTGAAGCCTAGCCCTGTTGTATTTGTATTAAAGATTTGTACACATTTGTATAATAATCTGTACCTTG
TGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCTTGCTGTTTTTATATCATTGTTTTATTTTGTTTTTTTAAATAAATCCTAGTGGTTTGATCCAAATCCTATTACAGTTGTATAA
AGAAACAATATTTTGTACTTATATTAAAGATCTCATTTTTAATATTTATAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001316754 ⟹ NP_001303683

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,742,868 - 75,758,606 (+)	NCBI
GRCm38	8	75,016,222 - 75,031,978 (+)	NCBI

Sequence:

show sequence

TTTGTTCTTGGCTCTTTTGTACCAGCTTCCTCCTTTGTAGGTAGCCAGTGTTACTAAAGGACTGGTTACCTGAAGTTGTCTGGGCACTTCTACGGAACCTGGAAAGATTATTTCAAACATCCACCAGC
TGAGAGCTACTGTCTTCCACCTCCTTGGAGCTGCGTTCGTGGCCAGTTGTCTGAATGCCGAAAAAGAAGAACATGTCTGCCTACCAGGTATTCTGTAAGGAGTACCGGGTAACCATTGTGGCTGACCA
TCCAGGTATAGATTTTGGGGAACTTAGTAAAAAATTGGCTGAAGTATGGAAGCAGTTGCCAGAAAAAGACAAACTGATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAAACAGAACAAAGCTGAAG
CCACAACTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTCCATGAAAGTCAGAGCCTCTTCTGTAGGAGTACTGTCACCCCAAAAGAAGTCCCCACCCACCACAATGCTTTTGCCAGCCTCACCAGCC
AAAGCTCCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCCCTCAGCCTCATTGGACACCGCCTACAGGAGACAGAGGGCATGGTGGCAGTGTCTGGAAGCTTGTCAGT
GCTCCTAGATTCCATTATCTGTGCTCTTGGCCCTCTGGCATGCCTGACCACACAACTACCTGAACTGAACGGCTGTCCTAAACAGGTCTTGTCAAACACGCTGGACAACATTGCATACATTATGCCTG
GACTGTGACTTCCAAGACGCCTGGGACAGAAGACTGTCTACCCCTTCGCTAGTCTATGTATAGATGACTGTTCCAGACCCTCCACTGACCTCTGGGTGTAGGTTTTAAATTTTTATAATCTATATATA
CGTATATAATGTACAGTATATACATAGGATATAACTACTTTGCTTTTAATAATTTTATGAAATGGCAAAGGTTTAGCTAAAAGGAAACTTTAGCATGAATGTGGGCTTGGAATTATTTTTTTGTGAAA
AAAAAATCTGCCTTAAAAAAAATCAGTGTAATTTGGGGACTAGGGGCTTATTCTGGGTGCCATGTATATCTCCTCATAGACTGCTAAAATGTGATTTTTTTTTTTTTTCCAAGCTTGGGTTTACCTCC
AGACCCATCACTGACCATTTGCCTTACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGGTGGGGAGGTGGAGCTTAGGT
GGACTGGGTAGGGGACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACCACGGTTCCACAGAGTCATCGGTACCATCTATAGCCTCAGCTATGTGATTCTTGGCAGCAG
AGAAATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCAACA
AATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTACATTGTGCTCTGCATTCCACACAGAGCTGGATCACAAAGAAGTTCTTGGTTCTCAGGAGG
GTTATCTATATGTGCGTGTGAGTGTATATTTTAATTATGTGTATTTAACTCTTTAGAATTTCTTAGATTTTAATTTATCCTGTAAATTTCTGTATATATAATTTAATAACAAGCCTCCACCAGCAGGA
GCATGTGGAGCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATATGTTAAGGTGTTGTGACTCAGAAAGGAACTTCATGGCCCTCAATAATGTTAGGAAAGTGAAATAG
AAAGGAATGTCACCATTCCTAATTTCCCTTATTCCCAAAGACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAA
AACCAAGCTGAGTTAATAACCATGCTTTCTTCTAATGGCCTGGATGGAACGAGGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATAGCCCGACTG
CTGTCACAGCTAAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGAAATAGGGAAAGGAACAGAAATATGTGGGAACTGAAATCAAGCAGAGCAGAAATTTCCATTTGA
GTTAACATGTCAGAACCTCATTTGACCCTGCAGAAGTTTCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCCTTGCTACAGACAGT
AGTGAACTCCTAAGGAGAACCGGCTTTTTCGGGTTTGTTTTCCTCTGAAGCCTAGCCCTGTTGTATTTGTATTAAAGATTTGTACACATTTGTATAATAATCTGTACCTTGTGGTATTTGGTACTATT
AGAGGAAAAATTTTGGATTCAGGCCTTCTTGCTGTTTTTATATCATTGTTTTATTTTGTTTTTTTAAATAAATCCTAGTGGTTTGATCCAAATCCTATTACAGTTGTATAAAGAAACAATATTTTGTA
CTTATATTAAAGATCTCATTTTTAATATTTATAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001415023 ⟹ NP_001401952

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI

RefSeq Acc Id:

NM_001415024 ⟹ NP_001401953

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI

RefSeq Acc Id:

NM_001415025 ⟹ NP_001401954

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI

RefSeq Acc Id:

NM_001415026 ⟹ NP_001401955

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI

RefSeq Acc Id:

NM_001415027 ⟹ NP_001401956

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI

RefSeq Acc Id:

NM_001415028 ⟹ NP_001401957

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI

RefSeq Acc Id:

NM_178017 ⟹ NP_821136

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	75,720,305 - 75,758,606 (+)	NCBI
GRCm38	8	74,993,650 - 75,031,978 (+)	NCBI
MGSCv37	8	77,517,602 - 77,555,871 (+)	RGD
Celera	8	79,293,778 - 79,332,024 (+)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

GGCTCGACTGAGGCGCCCTTGTTGCTCGCGCTTTTCTCTCCTTCTCCAAGATGGCGGCCGTCGG
CGGCGCTGAGGCGGGATCCGAGCGAGCCGAGTGAAGACCTGGTCCTGTAGACGGGAAGGAGCCTGGACACAGTGACACAACACATTCTCAAAGGCCCTGCAGGACCACCATGGCTTATGATGACTCCA
TGAAGAAAGAAGATTGCTTTGATGGTGATCACAGCTTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAACGAGAAAAGAAGCGGTCTTACAAAGACTTCTTAAGGGAAGAGGAAGAAGTCGCCGCG
CAGGTCAGGAGCTCTTCCAAGAAGAAGTCAAAGGACAGTGATTTGTTCTTCTTGGGGACGGACACACACAAGAAGAAGAGGAAGCACTCCCCTGACGATTACTACTATGGAGACATTTCGACTTTGGA
ATCATCACAGAAGAAAAAGAAGAAGTCTAGCCCACAGTCTCCGGACACAGCAATGGACCTGTTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCT
CCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACAAATCCAAAAAGATGAAGCCACTCTATGTG
AACACAGAGACACTGACTCTTCGTGAGCCAGATGGCTTAAAGATGAAACTCATTCTCTCACCAAAGGAGAAGGGAAGCAGCTCAGTGGAAGAGGAGGCTTTTCAGTACCCTGCCCAACAAGCTTCGCT
GAAGAAGCCCTCGAAGAAACTAGCTCGGGACGAGCAAGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCTCCTGAAAACGGCCCGGAAGAAGCACAAGTCATCCTCAGACTCACACTCCTCTCCTG
GCCCAGAAGGCTGTGGGTCTGACGTCTCCCAGCTTCCAGAACCCCACAGTGCCAATCTCGACATCACAGGGCTTGACCCAATTCTAGTAGAGTCCGAATCGTCCTCAGCTGGGGAGCTGGAGGCCGGG
GAGCTGGTGATAGATGACTCTTACAGGGAGATCAAGAAGAAGAAGAAGTCAAAAAAGAGCAAAAAGAAGAAGGACAAAGACAGACACAAGGAGAAGCGGCACTCCCGGACCAAGAGAAGCTCTGCCAG
AGAGCACGGTACTGCTCGGGAGCACGGGCTGATACCTGGCCCTGCCTCCAGTGTCCCCACCCTGCCACTTCCTGCTCTACACACAGATGGACACGGGGAGAAGAAAAAGAAAAGGGAAGACAAAGACA
GAGACAGAGAGAGGGGAGAAAAGCCGAAAAAGAAGAACATGTCTGCCTACCAGGTATTCTGTAAGGAGTACCGGGTAACCATTGTGGCTGACCATCCAGGTATAGATTTTGGGGAACTTAGTAAAAAA
TTGGCTGAAGTATGGAAGCAGTTGCCAGAAAAAGACAAACTGATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAAACAGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAGCATCCAGCGCAGA
AGGTTCCATGAAAGTCAGAGCCTCTTCTGTAGGAGTACTGTCACCCCAAAAGAAGTCCCCACCCACCACAATGCTTTTGCCAGCCTCACCAGCCAAAGCTCCTGAAACAGAGCCCATTGATGTCGCTG
CTCATCTCCAGTTGCTGGGAGAGTCCCTCAGCCTCATTGGACACCGCCTACAGGAGACAGAGGGCATGGTGGCAGTGTCTGGAAGCTTGTCAGTGCTCCTAGATTCCATTATCTGTGCTCTTGGCCCT
CTGGCATGCCTGACCACACAACTACCTGAACTGAACGGCTGTCCTAAACAGGTCTTGTCAAACACGCTGGACAACATTGCATACATTATGCCTGGACTGTGACTTCCAAGACGCCTGGGACAGAAGAC
TGTCTACCCCTTCGCTAGTCTATGTATAGATGACTGTTCCAGACCCTCCACTGACCTCTGGGTGTAGGTTTTAAATTTTTATAATCTATATATACGTATATAATGTACAGTATATACATAGGATATAA
CTACTTTGCTTTTAATAATTTTATGAAATGGCAAAGGTTTAGCTAAAAGGAAACTTTAGCATGAATGTGGGCTTGGAATTATTTTTTTGTGAAAAAAAAATCTGCCTTAAAAAAAATCAGTGTAATTT
GGGGACTAGGGGCTTATTCTGGGTGCCATGTATATCTCCTCATAGACTGCTAAAATGTGATTTTTTTTTTTTTTCCAAGCTTGGGTTTACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTT
ATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGGTGGGGAGGTGGAGCTTAGGTGGACTGGGTAGGGGACTCATTCCAATTCCTACTA
AAGAGATACCTGTGTCTCCAGTTTTATTGTAACCACGGTTCCACAGAGTCATCGGTACCATCTATAGCCTCAGCTATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTTG
GTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTG
GTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTACATTGTGCTCTGCATTCCACACAGAGCTGGATCACAAAGAAGTTCTTGGTTCTCAGGAGGGTTATCTATATGTGCGTGTGAGTGTATATTTTAA
TTATGTGTATTTAACTCTTTAGAATTTCTTAGATTTTAATTTATCCTGTAAATTTCTGTATATATAATTTAATAACAAGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCTTAAT
GTCTGTCTAAAAGCTCCAAGACGTCCATATGTTAAGGTGTTGTGACTCAGAAAGGAACTTCATGGCCCTCAATAATGTTAGGAAAGTGAAATAGAAAGGAATGTCACCATTCCTAATTTCCCTTATTC
CCAAAGACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAACCATGCTTTCTTCTA
ATGGCCTGGATGGAACGAGGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATAGCCCGACTGCTGTCACAGCTAAGCTTCTCACAGGACTGTGTCA
GCTCAGAGCAGTTTTGAGATTTAATCTGAGAAATAGGGAAAGGAACAGAAATATGTGGGAACTGAAATCAAGCAGAGCAGAAATTTCCATTTGAGTTAACATGTCAGAACCTCATTTGACCCTGCAGA
AGTTTCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCCTTGCTACAGACAGTAGTGAACTCCTAAGGAGAACCGGCTTTTTCGGGT
TTGTTTTCCTCTGAAGCCTAGCCCTGTTGTATTTGTATTAAAGATTTGTACACATTTGTATAATAATCTGTACCTTGTGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCTTGCTG
TTTTTATATCATTGTTTTATTTTGTTTTTTTAAATAAATCCTAGTGGTTTGATCCAAATCCTATTACAGTTGTATAAAGAAACAATATTTTGTACTTATATTAAAGATCTCATTTTTAATATTTATAA
AAAAAAAAAAAAAAAA

hide sequence


Protein RefSeqs	NP_001303682	(Get FASTA)	NCBI Sequence Viewer
	NP_001303683	(Get FASTA)	NCBI Sequence Viewer
	NP_001401952	(Get FASTA)	NCBI Sequence Viewer
	NP_001401953	(Get FASTA)	NCBI Sequence Viewer
	NP_001401954	(Get FASTA)	NCBI Sequence Viewer
	NP_001401955	(Get FASTA)	NCBI Sequence Viewer
	NP_001401956	(Get FASTA)	NCBI Sequence Viewer
	NP_001401957	(Get FASTA)	NCBI Sequence Viewer
	NP_821136	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH23167	(Get FASTA)	NCBI Sequence Viewer
	AAH23721	(Get FASTA)	NCBI Sequence Viewer
	AAH49800	(Get FASTA)	NCBI Sequence Viewer
	BAB29483	(Get FASTA)	NCBI Sequence Viewer
	BAC40551	(Get FASTA)	NCBI Sequence Viewer
	BAE33802	(Get FASTA)	NCBI Sequence Viewer
	EDL10821	(Get FASTA)	NCBI Sequence Viewer
	EDL10822	(Get FASTA)	NCBI Sequence Viewer
	EDL10823	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000045126
	ENSMUSP00000045126.8
	ENSMUSP00000105566
	ENSMUSP00000105566.2
	ENSMUSP00000133586.2
	ENSMUSP00000148561.2

RefSeq Acc Id:	NP_821136 ⟸ NM_178017
- Peptide Label:	isoform 1
- UniProtKB:	Q80Y32 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAYDDSMKKEDCFDGDHSFEDIGLAAGRSQREKKRSYKDFLREEEEVAAQVRSSSKKKSKDSDLFFLGTDTHKKKRKHSPDDYYYGDISTLESSQKKKKKSSPQSPDTAMDLLKAITSPLAAGAKSSK KAGEKSSSSSSHPESRKEHHKKKGNGSSGELSLDDSNAHKSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVEEEAFQYPAQQASLKKPSKKLARDEQGALLLGHELQSLLKTARKKHKSSS DSHSSPGPEGCGSDVSQLPEPHSANLDITGLDPILVESESSSAGELEAGELVIDDSYREIKKKKKSKKSKKKKDKDRHKEKRHSRTKRSSAREHGTAREHGLIPGPASSVPTLPLPALHTDGHGEKKK KREDKDRDRERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSAEGSMKVRASSVGVLSPQKKSPPTTMLLPASPAKAPET EPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL hide sequence

RefSeq Acc Id:	NP_001303682 ⟸ NM_001316753
- Peptide Label:	isoform 2
- UniProtKB:	Q80Y32 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLLKAITSPLAAGAKSSKKAGEKSSSSSSHPESRKEHHKKKGNGSSGELSLDDSNAHKSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVEEEAFQYPAQQASLKKPSKKLARDEQGALLL GHELQSLLKTARKKHKSSSDSHSSPGPEGCGSDVSQLPEPHSANLDITGLDPILVESESSSAGELEAGELVIDDSYREIKKKKKSKKSKKKKDKDRHKEKRHSRTKRSSAREHGTAREHGLIPGPASS VPTLPLPALHTDGHGEKKKKREDKDRDRERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSAEGSMKVRASSVGVLSPQK KSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL hide sequence

RefSeq Acc Id:	NP_001303683 ⟸ NM_001316754
- Peptide Label:	isoform 3
- UniProtKB:	Q8BTT5 (UniProtKB/TrEMBL), Q8R579 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSAEGSMKVRASSVGVLSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLG ESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL hide sequence

Ensembl Acc Id:

ENSMUSP00000148561 ⟸ ENSMUST00000211863

Ensembl Acc Id:

ENSMUSP00000133586 ⟸ ENSMUST00000145919

Protein Domains

DUF4171 HMG box

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q80Y32-F1-model_v2	AlphaFold	Q80Y32	1-594	view protein structure

RGD ID:

8667497

Promoter ID:

EPDNEW_M11780

Type:

multiple initiation site

Name:

Hmgxb4_1

Description:

Mus musculus HMG box domain containing 4 , transcript variant3, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M11781

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	74,993,685 - 74,993,745	EPDNEW

RGD ID:

8667499

Promoter ID:

EPDNEW_M11781

Type:

initiation region

Name:

Hmgxb4_2

Description:

Mus musculus HMG box domain containing 4 , transcript variant3, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M11780

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	75,016,240 - 75,016,300	EPDNEW

RGD ID:

6843322

Promoter ID:

MM_KWN:54892

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, ES_Cell, Lung, MEF_B4, Spleen

Transcripts:

OTTMUST00000042001, OTTMUST00000042002, OTTMUST00000042004, OTTMUST00000042005, OTTMUST00000042006, UC009MGW.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	77,517,376 - 77,517,876 (+)	MPROMDB

RGD ID:

6843314

Promoter ID:

MM_KWN:54893

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

ES_Cell

Transcripts:

UC009MGZ.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	77,539,871 - 77,540,371 (+)	MPROMDB

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000034518	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000041759	ENTREZGENE
	ENSMUST00000041759.14	UniProtKB/TrEMBL
	ENSMUST00000109940	ENTREZGENE
	ENSMUST00000109940.2	UniProtKB/TrEMBL
	ENSMUST00000145919.2	UniProtKB/TrEMBL
	ENSMUST00000211863.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.30.10	UniProtKB/TrEMBL
InterPro	DUF4171	UniProtKB/TrEMBL
	HMG_box_dom_sf	UniProtKB/TrEMBL
	HMG_superfamily	UniProtKB/TrEMBL
	HMGXB4	UniProtKB/TrEMBL
	HMGXB4_HMG-box	UniProtKB/TrEMBL
KEGG Report	mmu:70823	UniProtKB/TrEMBL
MGD	MGI:1918073	ENTREZGENE
NCBI Gene	70823	ENTREZGENE
PANTHER	HMG DOMAIN-CONTAINING PROTEIN 4	UniProtKB/TrEMBL
	PTHR46584	UniProtKB/TrEMBL
Pfam	DUF4171	UniProtKB/TrEMBL
	HMG_box	UniProtKB/TrEMBL
PhenoGen	Hmgxb4	PhenoGen
PRINTS	HIGHMOBLTY12	UniProtKB/TrEMBL
PROSITE	HMG_BOX_2	UniProtKB/TrEMBL
SMART	HMG	UniProtKB/TrEMBL
Superfamily-SCOP	HMG-box	UniProtKB/TrEMBL
UniProt	A0A1D5RLZ2_MOUSE	UniProtKB/TrEMBL
	G3UX81_MOUSE	UniProtKB/TrEMBL
	Q3U0Q0_MOUSE	UniProtKB/TrEMBL
	Q80Y32	ENTREZGENE, UniProtKB/TrEMBL
	Q8BTT5	ENTREZGENE, UniProtKB/TrEMBL
	Q8CGJ8_MOUSE	UniProtKB/TrEMBL
	Q8R579	ENTREZGENE, UniProtKB/TrEMBL
	Q9D639_MOUSE	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Mammalian Phenotype