Myo9b (myosin IXb) - Rat Genome Database
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Gene: Myo9b (myosin IXb) Mus musculus
Analyze
Symbol: Myo9b
Name: myosin IXb
RGD ID: 10961
MGI Page MGI
Description: Is expressed in brain; cerebellum; heart; inner ear; and skeletal muscle. Human ortholog(s) of this gene implicated in celiac disease. Orthologous to human MYO9B (myosin IXB); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: myosin-IXb; unconventional myosin-9b; unconventional myosin-IXb
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,725,220 - 71,813,357 (+)NCBIGRCm39mm39
GRCm39 Ensembl871,725,358 - 71,813,357 (+)Ensembl
GRCm38871,272,576 - 71,360,713 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl871,272,714 - 71,360,713 (+)EnsemblGRCm38mm10GRCm38
MGSCv37873,796,613 - 73,884,611 (+)NCBIGRCm37mm9NCBIm37
MGSCv36874,201,723 - 74,289,702 (+)NCBImm8
Celera873,795,997 - 73,883,793 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8884266   PMID:8954808   PMID:9169155   PMID:9417917   PMID:10349636   PMID:10580159   PMID:10729222   PMID:11042159   PMID:11076861   PMID:11212352   PMID:11217851   PMID:12466851  
PMID:12477932   PMID:12520002   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17314409   PMID:20566876   PMID:21267068   PMID:21677750   PMID:24646736   PMID:25903725   PMID:27034005  
PMID:28378742   PMID:28585695   PMID:29875261   PMID:31138677   PMID:32098917  


Genomics

Comparative Map Data
Myo9b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,725,220 - 71,813,357 (+)NCBIGRCm39mm39
GRCm39 Ensembl871,725,358 - 71,813,357 (+)Ensembl
GRCm38871,272,576 - 71,360,713 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl871,272,714 - 71,360,713 (+)EnsemblGRCm38mm10GRCm38
MGSCv37873,796,613 - 73,884,611 (+)NCBIGRCm37mm9NCBIm37
MGSCv36874,201,723 - 74,289,702 (+)NCBImm8
Celera873,795,997 - 73,883,793 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.43NCBI
MYO9B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1917,075,781 - 17,214,537 (+)EnsemblGRCh38hg38GRCh38
GRCh381917,075,777 - 17,213,286 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371917,186,587 - 17,324,095 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,073,528 - 17,185,104 (+)NCBINCBI36hg18NCBI36
Build 341917,073,527 - 17,185,103NCBI
Celera1917,088,108 - 17,225,623 (+)NCBI
Cytogenetic Map19p13.11NCBI
HuRef1916,754,814 - 16,891,543 (+)NCBIHuRef
CHM1_11917,186,170 - 17,323,621 (+)NCBICHM1_1
Myo9b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21617,945,379 - 18,030,114 (+)NCBI
Rnor_6.0 Ensembl1619,669,411 - 19,754,069 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01619,669,373 - 19,754,065 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01619,529,497 - 19,614,171 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41618,434,261 - 18,519,220 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11618,434,258 - 18,519,218 (+)NCBI
Celera1618,153,160 - 18,237,714 (+)NCBICelera
RH 3.4 Map16194.32RGD
Cytogenetic Map16p14NCBI
Myo9b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955524974,844 - 1,024,311 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955524973,576 - 1,024,351 (-)NCBIChiLan1.0ChiLan1.0
MYO9B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11917,648,078 - 17,675,265 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01916,563,005 - 16,700,312 (+)NCBIMhudiblu_PPA_v0panPan3
MYO9B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2045,512,276 - 45,582,619 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12045,512,286 - 45,582,619 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Myo9b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365963,617,680 - 3,697,332 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYO9B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl260,455,605 - 60,567,505 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1260,455,605 - 60,567,479 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,972,826 - 60,077,954 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYO9B
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1615,571,276 - 15,707,571 (+)NCBI
ChlSab1.1 Ensembl615,596,583 - 15,707,567 (+)Ensembl
Myo9b
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624908689,373 - 751,851 (-)NCBI

Position Markers
AF143683  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,360,328 - 71,360,433UniSTSGRCm38
MGSCv37873,884,227 - 73,884,332UniSTSGRCm37
Celera873,883,409 - 73,883,514UniSTS
Cytogenetic Map8B3.3UniSTS
Whitehead/MRC_RH8763.62UniSTS
D8Mit233  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,322,450 - 71,322,762UniSTSGRCm38
MGSCv37873,846,349 - 73,846,661UniSTSGRCm37
Celera873,845,578 - 73,845,889UniSTS
Cytogenetic Map8B3.3UniSTS
cM Map833.0UniSTS
Whitehead Genetic835.0UniSTS
Whitehead/MRC_RH8754.73UniSTS
Whitehead_YAC8 UniSTS
D8Mit31  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,287,817 - 71,287,993UniSTSGRCm38
MGSCv37873,811,716 - 73,811,892UniSTSGRCm37
Celera873,811,019 - 73,811,175UniSTS
Cytogenetic Map8B3.3UniSTS
cM Map833.0UniSTS
Whitehead Genetic835.0UniSTS
Whitehead_YAC8 UniSTS
AU015531  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,277,819 - 71,278,025UniSTSGRCm38
MGSCv37873,801,718 - 73,801,924UniSTSGRCm37
Celera873,801,087 - 73,801,293UniSTS
Cytogenetic Map8B3.3UniSTS
cM Map833.5UniSTS
Whitehead/MRC_RH8768.45UniSTS
AI237607  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,348,574 - 71,348,664UniSTSGRCm38
MGSCv37873,872,473 - 73,872,563UniSTSGRCm37
Celera873,871,655 - 73,871,745UniSTS
Cytogenetic Map8B3.3UniSTS
Myo9b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B3.3UniSTS
cM Map833.5UniSTS
Myo9b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B3.3UniSTS
Myo9b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,359,407 - 71,360,021UniSTSGRCm38
MGSCv37873,883,306 - 73,883,920UniSTSGRCm37
Celera873,882,488 - 73,883,102UniSTS
Cytogenetic Map8B3.3UniSTS
Myo9b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,358,167 - 71,359,054UniSTSGRCm38
MGSCv37873,882,066 - 73,882,953UniSTSGRCm37
Celera873,881,248 - 73,882,135UniSTS
Cytogenetic Map8B3.3UniSTS
Myo9b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,348,899 - 71,349,008UniSTSGRCm38
MGSCv37873,872,798 - 73,872,907UniSTSGRCm37
Celera873,871,980 - 73,872,089UniSTS
Cytogenetic Map8B3.3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83201654471287993Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3201654471287993Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3201654471287993Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3201654471287993Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1243
Count of miRNA genes:331
Interacting mature miRNAs:372
Transcripts:ENSMUST00000071935, ENSMUST00000168839, ENSMUST00000170242
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001142322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_379036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC157609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF143683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF143685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF143686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF143687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC138454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF746812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000071935   ⟹   ENSMUSP00000071827
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,272,734 - 71,360,713 (+)Ensembl
RefSeq Acc Id: ENSMUST00000168839   ⟹   ENSMUSP00000131635
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,272,755 - 71,360,712 (+)Ensembl
RefSeq Acc Id: ENSMUST00000170242   ⟹   ENSMUSP00000129220
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,272,714 - 71,360,712 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212173
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,333,817 - 71,339,008 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212412   ⟹   ENSMUSP00000148528
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,348,778 - 71,360,709 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212935   ⟹   ENSMUSP00000148316
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,272,714 - 71,359,921 (+)Ensembl
RefSeq Acc Id: NM_001142322   ⟹   NP_001135794
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,358 - 71,813,356 (+)NCBI
GRCm38871,272,714 - 71,360,712 (+)NCBI
MGSCv37873,796,613 - 73,884,611 (+)RGD
Celera873,795,997 - 73,883,793 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001142323   ⟹   NP_001135795
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,358 - 71,813,356 (+)NCBI
GRCm38871,272,714 - 71,360,712 (+)NCBI
MGSCv37873,796,613 - 73,884,611 (+)RGD
Celera873,795,997 - 73,883,793 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509566   ⟹   XP_006509629
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509567   ⟹   XP_006509630
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509568   ⟹   XP_006509631
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509569   ⟹   XP_006509632
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509571   ⟹   XP_006509634
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509572   ⟹   XP_006509635
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509575   ⟹   XP_006509638
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509576   ⟹   XP_006509639
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509577   ⟹   XP_006509640
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509578   ⟹   XP_006509641
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509579   ⟹   XP_006509642
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509580   ⟹   XP_006509643
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,780,550 - 71,813,357 (+)NCBI
GRCm38871,327,906 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509581   ⟹   XP_006509644
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,786,307 - 71,813,357 (+)NCBI
GRCm38871,333,663 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509582   ⟹   XP_006509645
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,786,461 - 71,813,357 (+)NCBI
GRCm38871,333,817 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509584   ⟹   XP_006509647
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,787,054 - 71,813,357 (+)NCBI
GRCm38871,334,409 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509585   ⟹   XP_006509648
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,781,310 - 71,813,357 (+)NCBI
GRCm38871,328,666 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509586   ⟹   XP_006509649
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,787,054 - 71,813,357 (+)NCBI
GRCm38871,334,409 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312598   ⟹   XP_017168087
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312599   ⟹   XP_017168088
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312600   ⟹   XP_017168089
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312604   ⟹   XP_017168093
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312606   ⟹   XP_017168095
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312607   ⟹   XP_017168096
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243331   ⟹   XP_030099191
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243333   ⟹   XP_030099193
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
GRCm38871,272,576 - 71,360,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036153785   ⟹   XP_036009678
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
RefSeq Acc Id: XM_036153786   ⟹   XP_036009679
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,786,307 - 71,813,357 (+)NCBI
RefSeq Acc Id: XM_036153787   ⟹   XP_036009680
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,813,357 (+)NCBI
RefSeq Acc Id: XR_379036
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39871,725,220 - 71,807,955 (+)NCBI
GRCm38871,272,576 - 71,355,311 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001135794 (Get FASTA)   NCBI Sequence Viewer  
  NP_001135795 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509629 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509630 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509631 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509632 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509634 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509635 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509638 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509639 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509640 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509641 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509642 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509643 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509644 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509645 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509647 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509648 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509649 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168087 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168088 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168089 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168093 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168095 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168096 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099191 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099193 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009678 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009679 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009680 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF00118 (Get FASTA)   NCBI Sequence Viewer  
  AAF00120 (Get FASTA)   NCBI Sequence Viewer  
  AAF00121 (Get FASTA)   NCBI Sequence Viewer  
  AAF00122 (Get FASTA)   NCBI Sequence Viewer  
  AAI38455 (Get FASTA)   NCBI Sequence Viewer  
  BAE28431 (Get FASTA)   NCBI Sequence Viewer  
  BAE36941 (Get FASTA)   NCBI Sequence Viewer  
  BAE36977 (Get FASTA)   NCBI Sequence Viewer  
  EDL28901 (Get FASTA)   NCBI Sequence Viewer  
  EDL28902 (Get FASTA)   NCBI Sequence Viewer  
  Q9QY06 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001135794   ⟸   NM_001142322
- Peptide Label: isoform 1
- UniProtKB: E9PZW8 (UniProtKB/TrEMBL),   Q3TRQ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001135795   ⟸   NM_001142323
- Peptide Label: isoform 2
- UniProtKB: E9PWZ6 (UniProtKB/TrEMBL),   Q3TRQ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006509629   ⟸   XM_006509566
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006509635   ⟸   XM_006509572
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_006509630   ⟸   XM_006509567
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006509632   ⟸   XM_006509569
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006509634   ⟸   XM_006509571
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006509640   ⟸   XM_006509577
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_006509638   ⟸   XM_006509575
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_006509639   ⟸   XM_006509576
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_006509631   ⟸   XM_006509568
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006509641   ⟸   XM_006509578
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_006509642   ⟸   XM_006509579
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_006509643   ⟸   XM_006509580
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_006509648   ⟸   XM_006509585
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_006509644   ⟸   XM_006509581
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_006509645   ⟸   XM_006509582
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_006509649   ⟸   XM_006509586
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_006509647   ⟸   XM_006509584
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_017168088   ⟸   XM_017312599
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_017168087   ⟸   XM_017312598
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017168089   ⟸   XM_017312600
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_017168093   ⟸   XM_017312604
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_017168095   ⟸   XM_017312606
- Peptide Label: isoform X24
- Sequence:
RefSeq Acc Id: XP_017168096   ⟸   XM_017312607
- Peptide Label: isoform X25
- Sequence:
RefSeq Acc Id: XP_030099193   ⟸   XM_030243333
- Peptide Label: isoform X14
RefSeq Acc Id: XP_030099191   ⟸   XM_030243331
- Peptide Label: isoform X7
RefSeq Acc Id: ENSMUSP00000129220   ⟸   ENSMUST00000170242
RefSeq Acc Id: ENSMUSP00000071827   ⟸   ENSMUST00000071935
RefSeq Acc Id: ENSMUSP00000131635   ⟸   ENSMUST00000168839
RefSeq Acc Id: ENSMUSP00000148316   ⟸   ENSMUST00000212935
RefSeq Acc Id: ENSMUSP00000148528   ⟸   ENSMUST00000212412
RefSeq Acc Id: XP_036009678   ⟸   XM_036153785
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036009680   ⟸   XM_036153787
- Peptide Label: isoform X23
RefSeq Acc Id: XP_036009679   ⟸   XM_036153786
- Peptide Label: isoform X20
Promoters
RGD ID:8667377
Promoter ID:EPDNEW_M11720
Type:initiation region
Name:Myo9b_1
Description:Mus musculus myosin IXb , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38871,272,720 - 71,272,780EPDNEW
RGD ID:6843520
Promoter ID:MM_KWN:54766
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:ENSMUST00000098648,   NM_001142322,   NM_001142322_MYO9B,   NM_001142323,   NM_015742,   UC009MCI.1,   UC009MCJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,796,419 - 73,796,919 (+)MPROMDB
RGD ID:6843517
Promoter ID:MM_KWN:54767
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   Spleen
Transcripts:UC009MCL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,814,171 - 73,815,027 (+)MPROMDB
RGD ID:6843518
Promoter ID:MM_KWN:54768
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   Lung,   MEF_B4,   Spleen
Transcripts:UC009MCM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,857,116 - 73,857,616 (+)MPROMDB
RGD ID:6843519
Promoter ID:MM_KWN:54769
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung
Transcripts:UC009MCN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36873,872,051 - 73,873,152 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:106624 AgrOrtholog
Ensembl Genes ENSMUSG00000004677 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000071827 UniProtKB/TrEMBL
  ENSMUSP00000129220 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000131635 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000148316 UniProtKB/TrEMBL
  ENSMUSP00000148528 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000071935 UniProtKB/TrEMBL
  ENSMUST00000168839 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000170242 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000212412 UniProtKB/TrEMBL
  ENSMUST00000212935 UniProtKB/TrEMBL
Gene3D-CATH 1.10.555.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro IQ_motif_EF-hand-BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYO9B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_head_motor_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYSc_Myo9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PE/DAG-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RA_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:17925 UniProtKB/TrEMBL
MGD MGI:106624 ENTREZGENE
NCBI Gene 17925 ENTREZGENE
PANTHER PTHR46184:SF2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Myosin_head UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00612 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00788 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Myo9b PhenoGen
PRINTS MYOSINHEAVY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE MYOSIN_MOTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50096 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50200 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHOGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART MYSc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00015 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00109 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00314 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1D5RLD1_MOUSE UniProtKB/TrEMBL
  A0A1D5RLW4_MOUSE UniProtKB/TrEMBL
  B9EHV1_MOUSE UniProtKB/TrEMBL
  E9PWZ6 ENTREZGENE, UniProtKB/TrEMBL
  E9PZW8 ENTREZGENE, UniProtKB/TrEMBL
  E9QKV6_MOUSE UniProtKB/TrEMBL
  MYO9B_MOUSE UniProtKB/Swiss-Prot
  Q3TRQ0 ENTREZGENE, UniProtKB/TrEMBL
  Q3TRT6_MOUSE UniProtKB/TrEMBL
  Q3UFX8_MOUSE UniProtKB/TrEMBL
  Q9QY06 ENTREZGENE
UniProt Secondary Q9QY07 UniProtKB/Swiss-Prot
  Q9QY08 UniProtKB/Swiss-Prot
  Q9QY09 UniProtKB/Swiss-Prot