LOC665443 (RNA binding motif protein 7 pseudogene) - Rat Genome Database
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Gene: LOC665443 (RNA binding motif protein 7 pseudogene) Mus musculus
Analyze
Symbol: LOC665443
Name: RNA binding motif protein 7 pseudogene
RGD ID: 1614577
MGI Page MGI
Description:
Type: pseudo
RefSeq Status: INFERRED
Also known as: EG665443
Related Functional Gene: Rbm7  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39867,298,480 - 67,300,162 (+)NCBIGRCm39mm39
GRCm38866,845,828 - 66,847,510 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl866,845,797 - 66,846,592 (+)EnsemblGRCm38mm10GRCm38
MGSCv37869,335,827 - 69,370,527 (+)NCBIGRCm37mm9NCBIm37
MGSCv36869,645,586 - 69,775,617 (+)NCBImm8
Celera869,371,960 - 69,406,406 (+)NCBICelera
Cytogenetic Map8B3.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Position Markers
RH135924  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38948,488,756 - 48,488,945UniSTSGRCm38
GRCm38866,847,261 - 66,847,452UniSTSGRCm38
MGSCv37948,296,861 - 48,297,050UniSTSGRCm37
MGSCv37869,371,160 - 69,371,351UniSTSGRCm37
Celera945,785,754 - 45,785,943UniSTS
Celera869,407,039 - 69,407,230UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map9A5.3UniSTS
AW554393  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38948,488,800 - 48,488,937UniSTSGRCm38
GRCm38866,847,269 - 66,847,408UniSTSGRCm38
MGSCv37948,296,905 - 48,297,042UniSTSGRCm37
MGSCv37869,371,168 - 69,371,307UniSTSGRCm37
Celera945,785,798 - 45,785,935UniSTS
Celera869,407,047 - 69,407,186UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map8B3.3UniSTS
Whitehead/MRC_RH9508.98UniSTS
UniSTS:224746  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38866,809,503 - 66,809,654UniSTSGRCm38
MGSCv37869,333,402 - 69,333,553UniSTSGRCm37
Celera869,369,535 - 69,369,686UniSTS
Cytogenetic Map8B3.3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81472316071045600Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83201654471287993Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3201654471287993Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3201654471287993Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3201654471287993Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83383736267837502Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_030364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000212284
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl866,845,797 - 66,846,592 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000110533 Ensembl
MGD MGI:3646609 ENTREZGENE
NCBI Gene 665443 ENTREZGENE
PhenoGen LOC665443 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-10-25 LOC665443  RNA binding motif protein 7 pseudogene  EG665443  predicted gene, EG665443  Symbol and/or name change 5135510 APPROVED