Slc27a1 (solute carrier family 27 (fatty acid transporter), member 1) - Rat Genome Database
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Gene: Slc27a1 (solute carrier family 27 (fatty acid transporter), member 1) Mus musculus
Analyze
Symbol: Slc27a1
Name: solute carrier family 27 (fatty acid transporter), member 1
RGD ID: 1553168
MGI Page MGI
Description: Exhibits fatty acid ligase activity; fatty acid transmembrane transporter activity; and identical protein binding activity. Involved in several processes, including adiponectin-activated signaling pathway; fatty acid transport; and positive regulation of cellular metabolic process. Localizes to basal plasma membrane; endoplasmic reticulum; and integral component of plasma membrane. Predicted to colocalize with mitochondrial inner membrane. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; phalanx; and sensory organ. Orthologous to human SLC27A1 (solute carrier family 27 member 1); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,2',4,4',5,5'-hexachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Fa; FAT; Fatp; FATP-1; FATP1; fatty acid transport protein 1; long-chain fatty acid transport protein 1; solute carrier family 27 member 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39872,021,372 - 72,039,951 (+)NCBIGRCm39mm39
GRCm38871,568,728 - 71,587,307 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl871,568,882 - 71,587,302 (+)EnsemblGRCm38mm10GRCm38
MGSCv37874,092,826 - 74,110,607 (+)NCBIGRCm37mm9NCBIm37
MGSCv36874,497,916 - 74,515,697 (+)NCBImm8
Celera874,083,284 - 74,101,015 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-Ethylhexanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-Iodothyronamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-(4-chlorophenyl)imidazo[2,1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime  (ISO)
9-cis-retinoic acid  (EXP,ISO)
actinomycin D  (EXP,ISO)
aflatoxin B1  (ISO)
aflatoxin B2  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP)
arsenite(3-)  (ISO)
benzo[a]pyrene  (EXP)
beta-hexachlorocyclohexane  (EXP)
bexarotene  (EXP,ISO)
bezafibrate  (EXP)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
captan  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
copper(II) sulfate  (ISO)
dexamethasone  (EXP)
dextran sulfate  (EXP)
dibutyl phthalate  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
farnesol  (ISO)
fenofibrate  (EXP)
flutamide  (ISO)
folic acid  (EXP)
folpet  (EXP)
genistein  (ISO)
GW 4064  (ISO)
GW 7647  (ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
lipopolysaccharide  (EXP)
methamphetamine  (EXP)
methotrexate  (ISO)
methoxychlor  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
monosodium L-glutamate  (EXP)
nickel atom  (ISO)
oleic acid  (ISO)
paracetamol  (EXP)
perfluorododecanoic acid  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP)
perfluoroundecanoic acid  (EXP)
permethrin  (ISO)
phenformin  (ISO)
phenobarbital  (EXP)
pioglitazone  (EXP)
pirinixic acid  (EXP)
rebaudioside A  (EXP)
rifampicin  (EXP)
rotenone  (ISO)
silicon dioxide  (ISO)
sodium dodecyl sulfate  (ISO)
steviol  (EXP)
stevioside  (EXP)
streptozocin  (ISO)
sulforaphane  (EXP)
tamoxifen  (EXP)
testosterone  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (ISO)
titanium dioxide  (EXP)
tributylstannane  (EXP)
trichostatin A  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vanadyl sulfate  (ISO)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:7954810   PMID:8843418   PMID:9671728   PMID:9765271   PMID:9786857   PMID:9892232   PMID:9933587   PMID:10349636   PMID:10471110   PMID:10593920   PMID:11042159   PMID:11076861  
PMID:11217851   PMID:11470793   PMID:11970897   PMID:12235169   PMID:12466851   PMID:12477932   PMID:12533547   PMID:12566451   PMID:12937175   PMID:14610273   PMID:14681479   PMID:14991074  
PMID:15464426   PMID:15489334   PMID:15496455   PMID:15618539   PMID:15699031   PMID:16141072   PMID:16141073   PMID:16354187   PMID:16357361   PMID:17130465   PMID:17463056   PMID:18258213  
PMID:18653710   PMID:19429947   PMID:19535819   PMID:19560442   PMID:20356843   PMID:20667975   PMID:21106494   PMID:21267068   PMID:21442160   PMID:21843524   PMID:21873635   PMID:22028793  
PMID:22927462   PMID:23024797   PMID:23166839   PMID:24086110   PMID:24441829   PMID:24858472   PMID:25184958   PMID:26241474   PMID:26263173   PMID:27110821   PMID:27562723   PMID:27694478  
PMID:27974211   PMID:28035674   PMID:28159809   PMID:28178239   PMID:28378742   PMID:28672005   PMID:29035781   PMID:29272817  


Genomics

Comparative Map Data
Slc27a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39872,021,372 - 72,039,951 (+)NCBIGRCm39mm39
GRCm38871,568,728 - 71,587,307 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl871,568,882 - 71,587,302 (+)EnsemblGRCm38mm10GRCm38
MGSCv37874,092,826 - 74,110,607 (+)NCBIGRCm37mm9NCBIm37
MGSCv36874,497,916 - 74,515,697 (+)NCBImm8
Celera874,083,284 - 74,101,015 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
SLC27A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1917,468,769 - 17,506,168 (+)EnsemblGRCh38hg38GRCh38
GRCh381917,468,745 - 17,506,169 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371917,581,300 - 17,616,977 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,442,300 - 17,477,977 (+)NCBINCBI36hg18NCBI36
Celera1917,482,907 - 17,518,593 (+)NCBI
Cytogenetic Map19p13.11NCBI
HuRef1917,146,725 - 17,182,058 (+)NCBIHuRef
CHM1_11917,580,621 - 17,616,359 (+)NCBICHM1_1
Slc27a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01619,997,823 - 20,016,193 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1619,999,112 - 20,016,190 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01619,859,540 - 19,880,871 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41618,769,909 - 18,786,988 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11618,769,906 - 18,786,985 (+)NCBI
Celera1618,482,929 - 18,499,970 (+)NCBICelera
Cytogenetic Map16p14NCBI
Slc27a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955524805,014 - 821,838 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955524803,793 - 821,920 (-)NCBIChiLan1.0ChiLan1.0
SLC27A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11917,929,785 - 17,966,171 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1917,929,785 - 17,966,171 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01916,956,000 - 16,993,429 (+)NCBIMhudiblu_PPA_v0panPan3
SLC27A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2045,310,088 - 45,340,230 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12045,309,094 - 45,341,101 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Slc27a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365963,426,807 - 3,451,259 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC27A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl260,203,374 - 60,235,652 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1260,203,374 - 60,235,689 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,752,658 - 59,771,672 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC27A1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1615,967,126 - 15,995,039 (+)NCBI
Slc27a1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624908531,313 - 549,570 (-)NCBI

Position Markers
BB393209  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,587,109 - 71,587,227UniSTSGRCm38
MGSCv37874,111,008 - 74,111,126UniSTSGRCm37
Celera874,101,418 - 74,101,536UniSTS
Cytogenetic Map8B3.3UniSTS
Whitehead/MRC_RH8765.82UniSTS
Slc27a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38871,584,848 - 71,586,488UniSTSGRCm38
MGSCv37874,108,747 - 74,110,387UniSTSGRCm37
Celera874,099,155 - 74,100,795UniSTS
Cytogenetic Map8B3.3UniSTS
cM Map8 UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:301
Count of miRNA genes:231
Interacting mature miRNAs:252
Transcripts:ENSMUST00000034267
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001357180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC162033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY289046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY605212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK624531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U15976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000034267   ⟹   ENSMUSP00000034267
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,568,927 - 71,586,708 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211811
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,580,516 - 71,587,302 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211886
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,570,655 - 71,582,449 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212111   ⟹   ENSMUSP00000148305
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,569,748 - 71,579,782 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212211
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,579,213 - 71,587,301 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212225
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,569,679 - 71,579,655 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212889   ⟹   ENSMUSP00000148768
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,568,882 - 71,586,705 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212989
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,568,906 - 71,570,826 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213100   ⟹   ENSMUSP00000148616
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl871,570,172 - 71,579,478 (+)Ensembl
RefSeq Acc Id: NM_001357180   ⟹   NP_001344109
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,951 (+)NCBI
GRCm38871,568,871 - 71,587,307 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001357181   ⟹   NP_001344110
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,022,241 - 72,039,951 (+)NCBI
GRCm38871,569,597 - 71,587,307 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001357182   ⟹   NP_001344111
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,023,238 - 72,039,951 (+)NCBI
GRCm38871,570,594 - 71,587,307 (+)NCBI
Sequence:
RefSeq Acc Id: NM_011977   ⟹   NP_036107
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,951 (+)NCBI
GRCm38871,568,871 - 71,587,307 (+)NCBI
MGSCv37874,092,826 - 74,110,607 (+)RGD
Celera874,083,284 - 74,101,015 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509671   ⟹   XP_006509734
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
GRCm38871,568,874 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509674   ⟹   XP_006509737
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,495 - 72,039,948 (+)NCBI
GRCm38871,568,851 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509675   ⟹   XP_006509738
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,469 - 72,039,948 (+)NCBI
GRCm38871,568,825 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509677   ⟹   XP_006509740
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,022,260 - 72,039,948 (+)NCBI
GRCm38871,569,618 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509678   ⟹   XP_006509741
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,022,260 - 72,039,948 (+)NCBI
GRCm38871,569,597 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243574   ⟹   XP_030099434
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
GRCm38871,568,874 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243576   ⟹   XP_030099436
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
GRCm38871,568,874 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243578   ⟹   XP_030099438
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
GRCm38871,568,874 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243579   ⟹   XP_030099439
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
GRCm38871,568,874 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243580   ⟹   XP_030099440
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
GRCm38871,568,874 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243581   ⟹   XP_030099441
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,022,982 - 72,039,948 (+)NCBI
GRCm38871,570,341 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243582   ⟹   XP_030099442
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,372 - 72,039,948 (+)NCBI
GRCm38871,568,728 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243583   ⟹   XP_030099443
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,022,512 - 72,039,948 (+)NCBI
GRCm38871,569,870 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243585   ⟹   XP_030099445
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,517 - 72,039,948 (+)NCBI
GRCm38871,568,875 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243586   ⟹   XP_030099446
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,517 - 72,039,948 (+)NCBI
GRCm38871,568,874 - 71,587,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154056   ⟹   XP_036009949
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
RefSeq Acc Id: XM_036154057   ⟹   XP_036009950
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
RefSeq Acc Id: XM_036154058   ⟹   XP_036009951
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
RefSeq Acc Id: XM_036154059   ⟹   XP_036009952
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,517 - 72,039,948 (+)NCBI
RefSeq Acc Id: XR_004934827
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,990 - 72,039,948 (+)NCBI
RefSeq Acc Id: XR_004934828
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,514 - 72,039,948 (+)NCBI
RefSeq Acc Id: XR_004934829
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,514 - 72,039,948 (+)NCBI
RefSeq Acc Id: XR_004934830
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,514 - 72,039,948 (+)NCBI
RefSeq Acc Id: XR_004934831
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39872,021,515 - 72,039,948 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001344109 (Get FASTA)   NCBI Sequence Viewer  
  NP_001344110 (Get FASTA)   NCBI Sequence Viewer  
  NP_001344111 (Get FASTA)   NCBI Sequence Viewer  
  NP_036107 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509734 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509737 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509738 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509740 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509741 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099434 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099436 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099438 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099439 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099440 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099441 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099442 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099443 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099445 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099446 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009949 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009950 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009951 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009952 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC69640 (Get FASTA)   NCBI Sequence Viewer  
  AAC71060 (Get FASTA)   NCBI Sequence Viewer  
  AAH28937 (Get FASTA)   NCBI Sequence Viewer  
  BAC30746 (Get FASTA)   NCBI Sequence Viewer  
  BAE33101 (Get FASTA)   NCBI Sequence Viewer  
  BAE37924 (Get FASTA)   NCBI Sequence Viewer  
  BAE38263 (Get FASTA)   NCBI Sequence Viewer  
  EDL28940 (Get FASTA)   NCBI Sequence Viewer  
  EDL28941 (Get FASTA)   NCBI Sequence Viewer  
  EDL28942 (Get FASTA)   NCBI Sequence Viewer  
  EDL28943 (Get FASTA)   NCBI Sequence Viewer  
  Q60714 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_036107   ⟸   NM_011977
- UniProtKB: Q60714 (UniProtKB/Swiss-Prot),   Q544D7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006509738   ⟸   XM_006509675
- Peptide Label: isoform X2
- UniProtKB: Q60714 (UniProtKB/Swiss-Prot),   Q544D7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006509734   ⟸   XM_006509671
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006509737   ⟸   XM_006509674
- Peptide Label: isoform X2
- UniProtKB: Q60714 (UniProtKB/Swiss-Prot),   Q544D7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006509740   ⟸   XM_006509677
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006509741   ⟸   XM_006509678
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030099442   ⟸   XM_030243582
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001344109   ⟸   NM_001357180
RefSeq Acc Id: XP_030099440   ⟸   XM_030243580
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030099439   ⟸   XM_030243579
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030099434   ⟸   XM_030243574
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030099438   ⟸   XM_030243578
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030099436   ⟸   XM_030243576
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030099446   ⟸   XM_030243586
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030099445   ⟸   XM_030243585
- Peptide Label: isoform X3
RefSeq Acc Id: NP_001344110   ⟸   NM_001357181
RefSeq Acc Id: XP_030099443   ⟸   XM_030243583
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030099441   ⟸   XM_030243581
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001344111   ⟸   NM_001357182
RefSeq Acc Id: ENSMUSP00000034267   ⟸   ENSMUST00000034267
RefSeq Acc Id: ENSMUSP00000148616   ⟸   ENSMUST00000213100
RefSeq Acc Id: ENSMUSP00000148768   ⟸   ENSMUST00000212889
RefSeq Acc Id: ENSMUSP00000148305   ⟸   ENSMUST00000212111
RefSeq Acc Id: XP_036009950   ⟸   XM_036154057
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036009951   ⟸   XM_036154058
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036009949   ⟸   XM_036154056
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036009952   ⟸   XM_036154059
- Peptide Label: isoform X3
Protein Domains
AMP-binding

Promoters
RGD ID:8667413
Promoter ID:EPDNEW_M11738
Type:initiation region
Name:Slc27a1_1
Description:Mus musculus solute carrier family 27 , member 1 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38871,580,435 - 71,580,495EPDNEW
RGD ID:6843728
Promoter ID:MM_KWN:54797
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3
Transcripts:NM_011977,   UC009MDX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36874,092,819 - 74,093,319 (+)MPROMDB
RGD ID:6843732
Promoter ID:MM_KWN:54798
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day3,   BoneMarrow_0Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:UC009MDY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36874,093,676 - 74,094,687 (+)MPROMDB
RGD ID:6843730
Promoter ID:MM_KWN:54799
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Kidney
Transcripts:UC009MDZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36874,102,166 - 74,103,532 (+)MPROMDB
RGD ID:6843731
Promoter ID:MM_KWN:54800
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney
Transcripts:UC009MEA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36874,104,066 - 74,104,782 (+)MPROMDB
RGD ID:6848343
Promoter ID:MM_ACW:47902
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   Kidney
Transcripts:SLC27A1.FSEP07,   SLC27A1.GSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36874,107,974 - 74,108,474 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1347098 AgrOrtholog
Ensembl Genes ENSMUSG00000031808 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000034267 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000148305 UniProtKB/TrEMBL
  ENSMUSP00000148616 UniProtKB/TrEMBL
  ENSMUSP00000148768 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000034267 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000212111 UniProtKB/TrEMBL
  ENSMUST00000212889 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000213100 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.12780 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AMP-binding_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-dep_Synth/Lig UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-dep_Synthh-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FATP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:26457 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1347098 ENTREZGENE
NCBI Gene 26457 ENTREZGENE
PANTHER PTHR43107:SF7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam AMP-binding UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc27a1 PhenoGen
PROSITE AMP_BINDING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.38165 ENTREZGENE
UniProt A0A1D5RLC0_MOUSE UniProtKB/TrEMBL
  A0A1D5RM39_MOUSE UniProtKB/TrEMBL
  Q3TN26_MOUSE UniProtKB/TrEMBL
  Q3TP13_MOUSE UniProtKB/TrEMBL
  Q544D7 ENTREZGENE, UniProtKB/TrEMBL
  Q60714 ENTREZGENE, UniProtKB/Swiss-Prot