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Gene: Gm4890 (predicted gene 4890) Mus musculus

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Symbol:

Gm4890

Name:

predicted gene 4890

RGD ID:

5685439

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

VALIDATED

Previously known as:

A630049P17

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	80,021,707 - 80,034,403 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	80,021,270 - 80,059,061 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	79,295,078 - 79,307,774 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	79,295,123 - 79,308,961 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	81,818,977 - 81,832,860 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
Celera	8	83,572,045 - 83,585,928 (+)	NCBI		Celera
Cytogenetic Map	8	C1	NCBI
cM Map	8	37.53	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gm4890	Mouse	biological_process	involved_in	ND		2290270		MGI	GO_REF:0000015

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gm4890	Mouse	cellular_component	is_active_in	ND		2290270		MGI	GO_REF:0000015

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gm4890	Mouse	molecular_function	enables	ND		2290270		MGI	GO_REF:0000015

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:14610273	PMID:16141072	PMID:16141073	PMID:24200680	PMID:27899360

Variants in Gm4890
779 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	45
Count of miRNA genes:	45
Interacting mature miRNAs:	45
Transcripts:	ENSMUST00000181030
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10043992	Hbnr11_m	Heligmosomoides bakeri nematode resistance 11 (mouse)			Not determined		8	66326836	100326976	Mouse
1301013	Capsq4_m	capsaicin sensitivity related QTL 4 (mouse)			Not determined		8	36630154	93455280	Mouse
1301717	Adip4_m	adiposity 4 (mouse)			Not determined		8	48090064	82090180	Mouse
1357715	Alaa3_m	alopecia areata 3 (mouse)			Not determined		8	49245591	83245673	Mouse
11353828	Gf7_m	gonadal fat pad weight 7 (mouse)					8	58928107	92928107	Mouse
14746987	Manh64_m	mandible shape 64 (mouse)					8	50505958	84505958	Mouse
1357470	Obq16_m	obesity QTL 16 (mouse)			Not determined		8	76411976	110412125	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	35109930	115563747	Mouse
1357787	Vtbt5_m	vertebral trabecular bone trait 5 (mouse)			Not determined		8	66084397	100084549	Mouse
10766453	Char11_m	P. chabaudi malaria resistance QTL 11 (mouse)					8	48090064	82090180	Mouse
1301506	Aevm1_m	autoimmune extremity vasculitis in MRL mice 1 (mouse)			Not determined		8	54740461	88740637	Mouse
1301441	Skull11_m	skull morphology 11 (mouse)			Not determined		8	48190168	82190288	Mouse
1301952	Im3_m	immunoregulatory 3 (mouse)			Not determined		8	55159258	89159407	Mouse
1301767	Fcsa2_m	femoral cross-sectional area 2 (mouse)			Not determined		8	71032003	105032123	Mouse
10412234	Nhdlq14_m	non-HDL QTL 14 (mouse)			Not determined		8	76411976	110412125	Mouse
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32506572	117965439	Mouse
1357708	Orq1_m	ovulation rate QTL 1 (mouse)			Not determined		8	71740461	124622354	Mouse
4141285	Tgq18_m	triglyceride QTL 18 (mouse)			Not determined			64186736	98186736	Mouse
4141797	Skmw16_m	skeletal muscle weight 16 (mouse)			Not determined		8	64666176	98666325	Mouse
14747005	Mancz7_m	mandible centroid size 7 (mouse)					8	50505958	84505958	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37867154	110326632	Mouse
10043975	Obq31_m	obesity QTL 31 (mouse)			Not determined		8	59136404	93136404	Mouse
1301581	Char2_m	P. chabaudi malaria resistance QTL 2 (mouse)			Not determined		8	79808806	113809031	Mouse
10412287	Carg3_m	Candida albicans resistance gene 3 (mouse)			Not determined		8	56298872	90298872	Mouse
1301874	Hdlq16_m	HDL QTL 16 (mouse)			Not determined		8	76411976	110412125	Mouse
1301872	Cd4ts3_m	CD4 T cell subset 3 (mouse)			Not determined		8	72122809	106123021	Mouse
10766466	Char12_m	P. chabaudi malaria resistance QTL 12 (mouse)					8	68722479	83326976	Mouse
1301688	Orch6_m	autoimmune orchitis resistance 6 (mouse)			Not determined		8	61513479	95513605	Mouse
1558780	Idd22_m	insulin dependent diabetes susceptibility 22 (mouse)			Not determined		8	71829531	105829637	Mouse
1300920	Pitm3_m	prion incubation time 3 (mouse)			Not determined		8	73929123	107929226	Mouse
12904744	Carcdq1_m	cardiac collagen deposition QTL 1 (mouse)					8	40162297	95416226	Mouse
4141395	Char2a_m	P. chabaudi malaria resistance QTL 2a (mouse)			Not determined			71589427	90929226	Mouse
14700686	Civq3_m	cerebral infarct volume QTL 3 (mouse)					8	52334843	86334843	Mouse
4142283	Imraq2_m	immune response to AAV2 QTL 2 (mouse)			Not determined		8	71032003	105032123	Mouse
27095912	Pglq14_m	pelvic girdle length QTL 14, 16 week (mouse)					8	74126628	126826739	Mouse
4142023	W3q5_m	weight 3 weeks QTL 5 (mouse)			Not determined			71740461	124622354	Mouse
1301099	Cbm2_m	cerebellum weight 2 (mouse)			Not determined		8	79245241	113245331	Mouse
1558890	Lith18_m	lithogenic gene 18 (mouse)			Not determined		8	76402145	110402251	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NR_045822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_045823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC101790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI553039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK041972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK137125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CJ130861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY468193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY468194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000181030

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,597 - 80,035,590 (+)	Ensembl
GRCm38.p6 Ensembl	8	79,295,123 - 79,308,961 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000209627

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,619 - 80,032,602 (+)	Ensembl
GRCm38.p6 Ensembl	8	79,295,368 - 79,305,795 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000241371

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,632 - 80,032,424 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000243346

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,693 - 80,032,351 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000245723

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,649 - 80,059,061 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000245746

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,653 - 80,032,740 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000246233

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,655 - 80,032,424 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000246396

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,702 - 80,059,059 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359343

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,669 - 80,059,059 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359344

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,694 - 80,059,059 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359345

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,707 - 80,059,059 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359346

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,702 - 80,034,321 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359347

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,270 - 80,032,424 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359348

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,666 - 80,032,417 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359349

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,701 - 80,032,353 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359350

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,049,580 - 80,059,059 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000359351

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	80,021,653 - 80,022,741 (+)	Ensembl

RefSeq Acc Id:

NR_045822

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	80,021,707 - 80,034,403 (+)	NCBI
GRCm38	8	79,295,078 - 79,307,774 (+)	ENTREZGENE
Celera	8	83,572,045 - 83,584,741 (+)	ENTREZGENE
cM Map	8		ENTREZGENE

Sequence:

show sequence

GTGCTTGGGCGGGAAGTGGGTGGTGAGGGCCGCTCTGGGCTCAGCGTTCCCCACCTGGAATGCGTCCTGGCTTCGGCTGGCCCGGCCCAACCCTCAGCGGCCGCGGTGCCCAGGCCCACTCCTTCCGC
GCCTGGAAACGTGAGACGGGTCACTGAGGACGACGTAGGCAAACTTTGCAGAGCACGTTGCCACCTGTTGGAGTAGCCGCTCCAGCCCCAGTCGAAATGCACGGCCGAACAATGGCAGTTCTGAGTGG
CTCAGGGGCCCACACTTTCTTTAAAACCGATGCACTCGTAGTAATATTTCTTATGCCCCACATCCAGAGGCCTGTGCTCACCACCTCAGCAGTGCCCGGGGAGGTTCGCCAGGCGTGGGCAGGCTCTC
CCTTGAAAGCACCTGACCTGGTTCTACCTTGCACTGGGGCTGAATGGGAATTACATGGGAATCTCTTATTGTAATGCATGAACAGATTTCACAAGAAAAGGGAACAGGACTGGACCGCTGGCTGTTCC
TTCTTTGATCCCAGGCATGATTTCAGCTTGTAGAATAAATGAGAAATGCCTGTTGGTTTAATTAAAAGAACCGCATTGGCTGTGCTAGCCTGCCTGCCTTCTGGTGCCCAAGCAAGTGTACTGATAAA
GGAATCAAAAGCTGCACACTCAATTGTCCCAGGGTTTTCTCATCTATCTTGACAGCTTTTGAGAATATAAGTCAATTTCTCAAAAGCGGTTTATTGTAAGCCTTGAAATATCCAGTTTCCTACCTGGT
ACCTTAAATCATTACTTTTTCCGTAGGGATAACTGGTGAACTATCTCCAAAATATATCCTTCTTGTCCGTTGACTCAGATAGCTCATTGGGAAGAAGCCAGCTGTCTCCTCTGGGATGCTGGCTGGCC
TTTGAGGTGGGCCCTGGAGCTACTGCCTGGGGATCAATGTACTACCACAACACAGACTAAATTCCTGGTCCCTTGGGATATACCTCCAGTGTAAGACCTCCAGGAAGGACTCCTGCTAGGCCCAATCA
CAGAGACTAGTAGGTGTGGTCAGAAAGCCCGGGGCACAGCCTGATTGGTCATTGTACAGGCGCGTTACCACTAAGGCTGAGCTTTAGGAGAAGAGCAAGACAATATCAATGGCTAGTGGGGTTCACAT
GAAGGCAAGACATGGACAGCTGCTCCTTCATCCGTGTTTTTATCCCCAAGGAACAGCTTTGTGAAAGTGCTCTGTGCTCTCAAGCTGTTGCCAGCAGGGTCTGTCTCTTCAGCGTGGCTTTTAAGAGG
AAAGTGCAGCAAACTGGAGCCTTAGCAAAAGGCTGCTCGCTAGCATGAGAAGCATTTGATTCCAGCTTGGAAACAAGGGGTGGGGCAAAGCCTTTTTACCACCTCCACCCCATCTCTCCCTCTCTCCC
TTTCAGAAAGGCAGATTTATCTAGTGGTGCATCCCTTGCCTTCATGTCAGAGTGTCAGCTTTGTCATATTCCTGACTGTTGTTACTAGAATTTTTTTAAGATTTATTTATTTTAAGATGTATTTATAG
ATACTTTTTGCCTGCACACATATCTCTGTGGGGGTGCTCTGGAACTAGAGTATGTGGGTTGTGGGAATTGAACCCCAGTCCTCTGGAGGAGCAGCCAGTGTTCTTAATCACTGAGCCATCTCTCCAGT
CCCAATTACTGGAATTTCATATGAAAGCAAAACCACGGCATAAATCTTAGCAAATTTGAATTCCATACTTTTTACCTTTTTCCATTCACCAGAGATGAGATGCAGGTATATTCACGTTAAAACAAAAA
TGCAAACAAGTCAGATAATTAAAAGGAAATCCAGATGATGCTCTCAAACCTGAAGAAACACTTGTGGAGCCAGATGGAAGCAGAGTAGAGTTGGACTCTGTCACCATCCCAAGGGAACGAAGCATCAT
GGGCTCTGATTTGTTCACTTGTTTCTTTATGTGCGTATGTACAGGAATGTATACTTGTGCTTGCATGGAAGTCAGAAGAGAGCATCCTGTCTCCCTCTCCATCACTGTCTTCTTCCTCTGAGCCAGGG
TCTGTCCCTCAACCCAAGGCTCTTGGTCTTCTTGGTTAGGCTAGAAGGCAGCAAGTCCCAGCAATCCCCCAGTCTCCGGCCCCTTAATGGATCAGTCTGGGGGTGTAGAGTGTCTGTGGGATCCAAAC
TTGAGATCGTAGCAAGCGATCTTAACTGTTGAGCCCTCTTTCCAACTGCTCCCTGTCTTGACAGCAAGAAAAATCCCAACATATACTCTGAGGTCATGTTGGAACCATGTGTTTGGAGACAGCAGAGG
TTTGGGACAATCTTTCCAATCAGGATGACTCACAGCTGTGATCAGGGCTTTCTCTTTTATCAGCTATACTATCAGAAAAGAAGACCCTTGTGAGCACAGTGTCTGCCTCAAGCTCTTCATCTTTTCCA
CTGTTACAAAATCTCTGGGGGAGGATTACACACAGGATCATGAGTCCTGTGTATGAAATTATGATGACTTATGAATGATTACATTCATCACAATTACTGTGAATAAAAAATGTTATGTTTTAAAGGAA
CACTGGGGAAATTATGAAAAGTGAATTAAGCCAAGAACAAAAGGACAAATCCATATTGCCTGATTTGTTTTATATGAGGTGC

hide sequence

RefSeq Acc Id:

NR_045823

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	80,021,707 - 80,034,403 (+)	NCBI
GRCm38	8	79,295,078 - 79,307,774 (+)	ENTREZGENE
Celera	8	83,572,045 - 83,584,741 (+)	ENTREZGENE
cM Map	8		ENTREZGENE

Sequence:

show sequence

GTGCTTGGGCGGGAAGTGGGTGGTGAGGGCCGCTCTGGGCTCAGCGTTCCCCACCTGGAATGCGTCCTGGCTTCGGCTGGCCCGGCCCAACCCTCAGCGGCCGCGGTGCCCAGGCCCACTCCTTCCGC
GCCTGGAAACGTGAGACGGGTCACTGAGGACGACGTAGGCAAACTTTGCAGAGCACGTTGCCACCTGTTGGAGTAGCCGCTCCAGCCCCAGTCGAAATGCACGGCCGAACAATGGCAGTTCTGAGTGG
CTCAGGGGCCCACACTTTCTTTAAAACCGATGCACTCGTAGTAATATTTCTTATGCCCCACATCCAGAGGCCTGTGCTCACCACCTCAGCAGTGCCCGGGGAGGTTCGCCAGGCGTGGGCAGGCTCTC
CCTTGAAAGCACCTGACCTGGTTCTACCTTGCACTGGGGCTGAATGTTTCACAAGAAAAGGGAACAGGACTGGACCGCTGGCTGTTCCTTCTTTGATCCCAGGCATGATTTCAGCTTGTAGAATAAAT
GAGAAATGCCTGTTGGTTTAATTAAAAGAACCGCATTGGCTGTGCTAGCCTGCCTGCCTTCTGGTGCCCAAGCAAGTGTACTGATAAAGGAATCAAAAGCTGCACACTCAATTGTCCCAGGGTTTTCT
CATCTATCTTGACAGCTTTTGAGAATATAAGTCAATTTCTCAAAAGCGGTTTATTGTAAGCCTTGAAATATCCAGTTTCCTACCTGGTACCTTAAATCATTACTTTTTCCGTAGGGATAACTGGTGAA
CTATCTCCAAAATATATCCTTCTTGTCCGTTGACTCAGATAGCTCATTGGGAAGAAGCCAGCTGTCTCCTCTGGGATGCTGGCTGGCCTTTGAGGTGGGCCCTGGAGCTACTGCCTGGGGATCAATGT
ACTACCACAACACAGACTAAATTCCTGGTCCCTTGGGATATACCTCCAGTGTAAGACCTCCAGGAAGGACTCCTGCTAGGCCCAATCACAGAGACTAGTAGGTGTGGTCAGAAAGCCCGGGGCACAGC
CTGATTGGTCATTGTACAGGCGCGTTACCACTAAGGCTGAGCTTTAGGAGAAGAGCAAGACAATATCAATGGCTAGTGGGGTTCACATGAAGGCAAGACATGGACAGCTGCTCCTTCATCCGTGTTTT
TATCCCCAAGGAACAGCTTTGTGAAAGTGCTCTGTGCTCTCAAGCTGTTGCCAGCAGGGTCTGTCTCTTCAGCGTGGCTTTTAAGAGGAAAGTGCAGCAAACTGGAGCCTTAGCAAAAGGCTGCTCGC
TAGCATGAGAAGCATTTGATTCCAGCTTGGAAACAAGGGGTGGGGCAAAGCCTTTTTACCACCTCCACCCCATCTCTCCCTCTCTCCCTTTCAGAAAGGCAGATTTATCTAGTGGTGCATCCCTTGCC
TTCATGTCAGAGTGTCAGCTTTGTCATATTCCTGACTGTTGTTACTAGAATTTTTTTAAGATTTATTTATTTTAAGATGTATTTATAGATACTTTTTGCCTGCACACATATCTCTGTGGGGGTGCTCT
GGAACTAGAGTATGTGGGTTGTGGGAATTGAACCCCAGTCCTCTGGAGGAGCAGCCAGTGTTCTTAATCACTGAGCCATCTCTCCAGTCCCAATTACTGGAATTTCATATGAAAGCAAAACCACGGCA
TAAATCTTAGCAAATTTGAATTCCATACTTTTTACCTTTTTCCATTCACCAGAGATGAGATGCAGGTATATTCACGTTAAAACAAAAATGCAAACAAGTCAGATAATTAAAAGGAAATCCAGATGATG
CTCTCAAACCTGAAGAAACACTTGTGGAGCCAGATGGAAGCAGAGTAGAGTTGGACTCTGTCACCATCCCAAGGGAACGAAGCATCATGGGCTCTGATTTGTTCACTTGTTTCTTTATGTGCGTATGT
ACAGGAATGTATACTTGTGCTTGCATGGAAGTCAGAAGAGAGCATCCTGTCTCCCTCTCCATCACTGTCTTCTTCCTCTGAGCCAGGGTCTGTCCCTCAACCCAAGGCTCTTGGTCTTCTTGGTTAGG
CTAGAAGGCAGCAAGTCCCAGCAATCCCCCAGTCTCCGGCCCCTTAATGGATCAGTCTGGGGGTGTAGAGTGTCTGTGGGATCCAAACTTGAGATCGTAGCAAGCGATCTTAACTGTTGAGCCCTCTT
TCCAACTGCTCCCTGTCTTGACAGCAAGAAAAATCCCAACATATACTCTGAGGTCATGTTGGAACCATGTGTTTGGAGACAGCAGAGGTTTGGGACAATCTTTCCAATCAGGATGACTCACAGCTGTG
ATCAGGGCTTTCTCTTTTATCAGCTATACTATCAGAAAAGAAGACCCTTGTGAGCACAGTGTCTGCCTCAAGCTCTTCATCTTTTCCACTGTTACAAAATCTCTGGGGGAGGATTACACACAGGATCA
TGAGTCCTGTGTATGAAATTATGATGACTTATGAATGATTACATTCATCACAATTACTGTGAATAAAAAATGTTATGTTTTAAAGGAACACTGGGGAAATTATGAAAAGTGAATTAAGCCAAGAACAA
AAGGACAAATCCATATTGCCTGATTTGTTTTATATGAGGTGC

hide sequence


GenBank Protein	EDL10872	(Get FASTA)	NCBI Sequence Viewer

RGD ID:

8667549

Promoter ID:

EPDNEW_M11805

Type:

initiation region

Name:

Gm4890_1

Description:

Mus musculus predicted gene 4890 , transcript variant 2, longnon-coding RNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	79,295,026 - 79,295,086	EPDNEW

RGD ID:

15093454

Promoter ID:

EPDNEWNC_M1373

Type:

initiation region

Name:

Gm4890_1

Description:

predicted gene 4890 [Source:MGI Symbol;Acc:MGI:3779445]

SO ACC ID:

SO:0000170

Source:

EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	79,295,109 - 79,295,169	EPDNEWNC

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000097174	Ensembl
MGD	MGI:3779445	ENTREZGENE
NCBI Gene	Gm4890	ENTREZGENE
PhenoGen	Gm4890	PhenoGen
RNAcentral	URS000075A49A	RNACentral
	URS000075A9E5	RNACentral
	URS00025E3626	RNACentral
	URS00025E925D	RNACentral
	URS00025EBACF	RNACentral
	URS00025EBE3E	RNACentral
	URS00025EF77C	RNACentral
	URS00025F0511	RNACentral
	URS00025F1333	RNACentral
	URS00025F2911	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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