Mmaa (methylmalonic aciduria (cobalamin deficiency) type A) - Rat Genome Database
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Gene: Mmaa (methylmalonic aciduria (cobalamin deficiency) type A) Mus musculus
Analyze
Symbol: Mmaa
Name: methylmalonic aciduria (cobalamin deficiency) type A
RGD ID: 1312826
MGI Page MGI
Description: Predicted to have GTP binding activity; GTPase activity; and protein homodimerization activity. Predicted to localize to mitochondrion. Is expressed in several structures, including alimentary system; cardiovascular system; genitourinary system; lung; and trophectoderm. Human ortholog(s) of this gene implicated in methylmalonic acidemia cblA type. Orthologous to human MMAA (metabolism of cobalamin associated A); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2810018E08Rik; AI840684; methylmalonic aciduria type A homolog, mitochondrial; MGC37960
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm4935  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39879,990,226 - 80,021,637 (-)NCBIGRCm39mm39
GRCm38879,263,597 - 79,295,002 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl879,263,598 - 79,294,937 (-)EnsemblGRCm38mm10GRCm38
MGSCv37881,790,323 - 81,818,855 (-)NCBIGRCm37mm9NCBIm37
MGSCv36882,162,496 - 82,191,009 (-)NCBImm8
Celera883,543,391 - 83,571,923 (-)NCBICelera
Cytogenetic Map8C1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)
mitochondrion  (ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16919269   PMID:18799693   PMID:21677750  
PMID:23022071   PMID:32325033  


Genomics

Comparative Map Data
Mmaa
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39879,990,226 - 80,021,637 (-)NCBIGRCm39mm39
GRCm38879,263,597 - 79,295,002 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl879,263,598 - 79,294,937 (-)EnsemblGRCm38mm10GRCm38
MGSCv37881,790,323 - 81,818,855 (-)NCBIGRCm37mm9NCBIm37
MGSCv36882,162,496 - 82,191,009 (-)NCBImm8
Celera883,543,391 - 83,571,923 (-)NCBICelera
Cytogenetic Map8C1NCBI
MMAA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl4145,599,042 - 145,660,033 (+)EnsemblGRCh38hg38GRCh38
GRCh384145,619,385 - 145,660,033 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh374146,540,540 - 146,581,187 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364146,779,677 - 146,796,187 (+)NCBINCBI36hg18NCBI36
Build 344146,917,831 - 146,934,342NCBI
Celera4143,868,075 - 143,908,722 (+)NCBI
Cytogenetic Map4q31.21NCBI
HuRef4142,270,497 - 142,311,145 (+)NCBIHuRef
CHM1_14146,517,133 - 146,557,773 (+)NCBICHM1_1
Mmaa
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01932,294,087 - 32,325,927 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1932,308,236 - 32,325,927 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01943,190,826 - 43,222,204 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41930,455,554 - 30,487,154 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11930,474,283 - 30,490,378 (+)NCBI
Celera1928,128,651 - 28,159,788 (+)NCBICelera
Cytogenetic Map19q11NCBI
Mmaa
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554281,473,898 - 1,489,665 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554281,465,118 - 1,489,332 (+)NCBIChiLan1.0ChiLan1.0
MMAA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14149,620,309 - 149,658,476 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4149,620,381 - 149,658,470 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04137,960,877 - 138,001,384 (+)NCBIMhudiblu_PPA_v0panPan3
MMAA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1544,220,934 - 44,241,101 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11544,221,082 - 44,243,530 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Mmaa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365353,511,389 - 3,538,038 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100523624
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl882,834,595 - 82,864,826 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1 Ensembl882,772,776 - 82,829,868 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1882,765,074 - 82,864,829 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2888,144,860 - 88,168,941 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MMAA
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl792,201,805 - 92,220,163 (+)Ensembl
ChlSab1.1792,180,963 - 92,218,068 (+)NCBI
Mmaa
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248534,546,959 - 4,565,880 (+)NCBI

Position Markers
AI840684  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381364,674,571 - 64,674,717UniSTSGRCm38
MGSCv371364,775,879 - 64,776,025UniSTSGRCm37
Celera1366,333,056 - 66,333,202UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map8C2UniSTS
Whitehead/MRC_RH11990.74UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:441
Count of miRNA genes:340
Interacting mature miRNAs:381
Transcripts:ENSMUST00000048718
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001363470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC101790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000048718   ⟹   ENSMUSP00000048826
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl879,263,598 - 79,294,937 (-)Ensembl
RefSeq Acc Id: ENSMUST00000210231   ⟹   ENSMUSP00000147987
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl879,267,908 - 79,294,680 (-)Ensembl
RefSeq Acc Id: NM_001363470   ⟹   NP_001350399
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,365 (-)NCBI
GRCm38879,263,597 - 79,294,736 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363471   ⟹   NP_001350400
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,365 (-)NCBI
GRCm38879,263,597 - 79,294,736 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363472   ⟹   NP_001350401
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,365 (-)NCBI
GRCm38879,263,597 - 79,294,736 (-)NCBI
Sequence:
RefSeq Acc Id: NM_133823   ⟹   NP_598584
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,590 (-)NCBI
GRCm38879,263,597 - 79,294,961 (-)NCBI
MGSCv37881,790,323 - 81,818,855 (-)RGD
Celera883,543,391 - 83,571,923 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530563   ⟹   XP_006530626
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,524 (-)NCBI
GRCm38879,264,498 - 79,294,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006530564   ⟹   XP_006530627
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,529 (-)NCBI
GRCm38879,264,498 - 79,294,891 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248261   ⟹   XP_011246563
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,020,862 (-)NCBI
GRCm38879,264,498 - 79,294,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248262   ⟹   XP_011246564
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,020,862 (-)NCBI
GRCm38879,264,498 - 79,294,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248263   ⟹   XP_011246565
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,495 (-)NCBI
GRCm38879,264,498 - 79,294,840 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248264   ⟹   XP_011246566
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,495 (-)NCBI
GRCm38879,264,498 - 79,294,840 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248265   ⟹   XP_011246567
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,637 (-)NCBI
GRCm38879,264,498 - 79,294,977 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248266   ⟹   XP_011246568
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,513 (-)NCBI
GRCm38879,264,498 - 79,294,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248267   ⟹   XP_011246569
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,020,862 (-)NCBI
GRCm38879,264,498 - 79,294,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248268   ⟹   XP_011246570
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,020,862 (-)NCBI
GRCm38879,264,498 - 79,294,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248269   ⟹   XP_011246571
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,020,862 (-)NCBI
GRCm38879,264,498 - 79,294,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248270   ⟹   XP_011246572
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,544 (-)NCBI
GRCm38879,264,498 - 79,294,840 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312506   ⟹   XP_017167995
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312507   ⟹   XP_017167996
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312508   ⟹   XP_017167997
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312509   ⟹   XP_017167998
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312510   ⟹   XP_017167999
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312511   ⟹   XP_017168000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312513   ⟹   XP_017168002
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243232   ⟹   XP_030099092
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,573 (-)NCBI
GRCm38879,264,498 - 79,294,938 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243233   ⟹   XP_030099093
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,631 (-)NCBI
GRCm38879,264,498 - 79,295,002 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243234   ⟹   XP_030099094
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243235   ⟹   XP_030099095
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,020,861 (-)NCBI
GRCm38879,263,597 - 79,294,232 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243236   ⟹   XP_030099096
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,580 (-)NCBI
GRCm38879,263,597 - 79,294,951 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243237   ⟹   XP_030099097
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,546 (-)NCBI
GRCm38879,263,597 - 79,294,917 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153712   ⟹   XP_036009605
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,546 (-)NCBI
RefSeq Acc Id: XM_036153713   ⟹   XP_036009606
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,991,127 - 80,021,504 (-)NCBI
RefSeq Acc Id: XM_036153714   ⟹   XP_036009607
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,548 (-)NCBI
RefSeq Acc Id: XM_036153715   ⟹   XP_036009608
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,601 (-)NCBI
RefSeq Acc Id: XM_036153716   ⟹   XP_036009609
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,539 (-)NCBI
RefSeq Acc Id: XM_036153717   ⟹   XP_036009610
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39879,990,226 - 80,021,573 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001350399 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350400 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350401 (Get FASTA)   NCBI Sequence Viewer  
  NP_598584 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530626 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530627 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246563 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246564 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246565 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246566 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246567 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246568 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246569 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246570 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246571 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246572 (Get FASTA)   NCBI Sequence Viewer  
  XP_017167995 (Get FASTA)   NCBI Sequence Viewer  
  XP_017167996 (Get FASTA)   NCBI Sequence Viewer  
  XP_017167997 (Get FASTA)   NCBI Sequence Viewer  
  XP_017167998 (Get FASTA)   NCBI Sequence Viewer  
  XP_017167999 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168000 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168002 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099092 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099093 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099094 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099095 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099096 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099097 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009605 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009606 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009607 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009608 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009609 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009610 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH21954 (Get FASTA)   NCBI Sequence Viewer  
  AAH27398 (Get FASTA)   NCBI Sequence Viewer  
  BAC34149 (Get FASTA)   NCBI Sequence Viewer  
  EDL10869 (Get FASTA)   NCBI Sequence Viewer  
  EDL10870 (Get FASTA)   NCBI Sequence Viewer  
  Q8C7H1 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_598584   ⟸   NM_133823
- Peptide Label: isoform a precursor
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006530627   ⟸   XM_006530564
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006530626   ⟸   XM_006530563
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246567   ⟸   XM_011248265
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246568   ⟸   XM_011248266
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246572   ⟸   XM_011248270
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246566   ⟸   XM_011248264
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246565   ⟸   XM_011248263
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246570   ⟸   XM_011248268
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246571   ⟸   XM_011248269
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246563   ⟸   XM_011248261
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246564   ⟸   XM_011248262
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246569   ⟸   XM_011248267
- Peptide Label: isoform X1
- UniProtKB: Q8C7H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017167995   ⟸   XM_017312506
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017168002   ⟸   XM_017312513
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017167996   ⟸   XM_017312507
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017168000   ⟸   XM_017312511
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017167998   ⟸   XM_017312509
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017167999   ⟸   XM_017312510
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017167997   ⟸   XM_017312508
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_030099096   ⟸   XM_030243236
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030099097   ⟸   XM_030243237
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001350400   ⟸   NM_001363471
- Peptide Label: isoform b
RefSeq Acc Id: NP_001350401   ⟸   NM_001363472
- Peptide Label: isoform b
RefSeq Acc Id: NP_001350399   ⟸   NM_001363470
- Peptide Label: isoform a precursor
RefSeq Acc Id: XP_030099095   ⟸   XM_030243235
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030099094   ⟸   XM_030243234
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030099093   ⟸   XM_030243233
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030099092   ⟸   XM_030243232
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000048826   ⟸   ENSMUST00000048718
RefSeq Acc Id: ENSMUSP00000147987   ⟸   ENSMUST00000210231
RefSeq Acc Id: XP_036009608   ⟸   XM_036153715
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036009610   ⟸   XM_036153717
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036009607   ⟸   XM_036153714
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036009609   ⟸   XM_036153716
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036009605   ⟸   XM_036153712
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036009606   ⟸   XM_036153713
- Peptide Label: isoform X1

Promoters
RGD ID:8667547
Promoter ID:EPDNEW_M11804
Type:initiation region
Name:Mmaa_1
Description:Mus musculus methylmalonic aciduria type A , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38879,294,937 - 79,294,997EPDNEW
RGD ID:6843512
Promoter ID:MM_KWN:54947
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_133823,   UC009MIM.1,   UC009MIO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36881,817,866 - 81,819,742 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1923805 AgrOrtholog
Ensembl Genes ENSMUSG00000037022 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000048826 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000147987 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000048718 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000210231 UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/Swiss-Prot
  GTPase_ArgK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot
KEGG Report mmu:109136 UniProtKB/Swiss-Prot
MGD MGI:1923805 ENTREZGENE
NCBI Gene 109136 ENTREZGENE
PANTHER PTHR23408 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mmaa PhenoGen
SMART AAA UniProtKB/Swiss-Prot
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot
TIGRFAMs lao UniProtKB/Swiss-Prot
UniGene Mm.26510 ENTREZGENE
UniProt A0A1B0GSL6_MOUSE UniProtKB/TrEMBL
  MMAA_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q8R2N3 UniProtKB/Swiss-Prot
  Q8VC22 UniProtKB/Swiss-Prot