Gm6503 (predicted gene 6503) - Rat Genome Database

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Gene: Gm6503 (predicted gene 6503) Mus musculus
Analyze
Symbol: Gm6503
Name: predicted gene 6503
RGD ID: 1620303
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG624433
Related Functional Gene: Ddx10  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39857,166,152 - 57,168,305 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl857,166,084 - 57,168,308 (+)EnsemblGRCm39 Ensembl
GRCm38856,713,117 - 56,715,270 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl856,713,049 - 56,715,273 (+)EnsemblGRCm38mm10GRCm38
MGSCv37859,191,914 - 59,194,067 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36859,606,343 - 59,607,415 (+)NCBIMGSCv36mm8
Celera859,367,373 - 59,369,526 (+)NCBICelera
Cytogenetic Map8B2NCBI
cM Map829.7NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm6503
191 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301139Lmr10_mleishmaniasis resistance 10 (mouse)Not determined83532109757797633Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
11049577Lmr10b_mleishmaniasis resistance 10b (mouse)83532109757797633Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
11049578Lmr10c_mleishmaniasis resistance 10c (mouse)83532109757797633Mouse
11041902Lmr10a_mleishmaniasis resistance 10a (mouse)83532109757797633Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84809006482090180Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84819016882190288Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3250657271740637Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85050595884505958Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
10043974Obq30_mobesity QTL 30 (mouse)Not determined82658332260583322Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83429039768290537Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84474791478748059Mouse

Markers in Region
AI646054  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38953,098,905 - 53,099,036UniSTSGRCm38
GRCm38856,715,510 - 56,715,642UniSTSGRCm38
MGSCv37952,907,010 - 52,907,141UniSTSGRCm37
MGSCv37859,194,307 - 59,194,439UniSTSGRCm37
Celera950,358,195 - 50,358,326UniSTS
Celera859,369,766 - 59,369,898UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map8B2UniSTS
Whitehead/MRC_RH9534.96UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_019646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000210829
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl857,166,084 - 57,168,308 (+)Ensembl
GRCm38.p6 Ensembl856,713,049 - 56,715,273 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000109760 Ensembl, ENTREZGENE
MGD MGI:3644902 ENTREZGENE
NCBI Gene 624433 ENTREZGENE
PhenoGen Gm6503 PhenoGen