Msmo1 (methylsterol monoxygenase 1) - Rat Genome Database
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Gene: Msmo1 (methylsterol monoxygenase 1) Mus musculus
Analyze
Symbol: Msmo1
Name: methylsterol monoxygenase 1
RGD ID: 732537
MGI Page MGI
Description: Predicted to have C-4 methylsterol oxidase activity. Predicted to be involved in sterol biosynthetic process. Predicted to localize to endoplasmic reticulum membrane. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and sensory organ. Orthologous to human MSMO1 (methylsterol monooxygenase 1); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1500001G16Rik; C-4 methylsterol oxidase; C78600; DES; DESP4; ERG2; ERG25; methylsterol monooxygenase; methylsterol monooxygenase 1; Sc4; Sc4mol; sterol-C4-methyl oxidase; sterol-C4-methyl oxidase-like
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39865,171,157 - 65,186,822 (-)NCBIGRCm39mm39
GRCm38864,718,123 - 64,733,578 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl864,718,139 - 64,733,792 (-)EnsemblGRCm38mm10GRCm38
MGSCv37867,196,942 - 67,212,375 (-)NCBIGRCm37mm9NCBIm37
MGSCv36867,610,337 - 67,625,770 (-)NCBImm8
Celera867,282,044 - 67,297,655 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(S)-nicotine  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-(3-(trifluoromethyl)phenyl)piperazine  (ISO)
1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine  (ISO)
1-benzylpiperazine  (ISO)
1-naphthyl isothiocyanate  (ISO)
14-demethyllanosterol  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
2-methoxyethanol  (ISO)
2-methylcholine  (ISO)
22-Hydroxycholesterol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
3-methylcholanthrene  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-bromo-2'-deoxyuridine  (EXP)
5alpha-cholest-7-en-3beta-ol  (ISO)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
amitriptyline  (ISO)
Aroclor 1254  (EXP)
arsenous acid  (ISO)
azathioprine  (ISO)
benzalkonium chloride  (EXP)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bromobenzene  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
capsaicin  (ISO)
carbon nanotube  (EXP,ISO)
celastrol  (ISO)
cetrorelix  (ISO)
choline  (EXP)
chromium(6+)  (EXP,ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (EXP,ISO)
clobetasol  (EXP)
clomipramine  (ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
curcumin  (EXP,ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
cyproconazole  (EXP,ISO)
DDE  (ISO)
dexamethasone  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP,ISO)
dicrotophos  (ISO)
difenoconazole  (ISO)
dioxygen  (EXP)
doxorubicin  (ISO)
endosulfan  (ISO)
epoxiconazole  (ISO)
erlotinib hydrochloride  (ISO)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
fenarimol  (ISO)
fenofibrate  (ISO)
flavonoids  (ISO)
fluoranthene  (EXP)
flusilazole  (EXP,ISO)
folic acid  (EXP)
formaldehyde  (ISO)
fumonisin B1  (EXP)
furan  (ISO)
gedunin  (ISO)
genistein  (EXP)
Heptachlor epoxide  (EXP)
hexaconazole  (EXP)
hydrogen peroxide  (ISO)
imipramine  (ISO)
indometacin  (ISO)
isotretinoin  (ISO)
kainic acid  (EXP)
ketamine  (ISO)
ketoconazole  (EXP,ISO)
L-methionine  (EXP)
leflunomide  (EXP,ISO)
lucanthone  (ISO)
LY294002  (ISO)
metformin  (ISO)
methapyrilene  (ISO)
methotrexate  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
mevastatin  (EXP)
miconazole  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
nickel dichloride  (ISO)
nicotine  (ISO)
O-methyleugenol  (ISO)
obeticholic acid  (ISO)
ozone  (EXP)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (EXP,ISO)
phenylephrine  (ISO)
phenylpropanolamine  (ISO)
pirinixic acid  (EXP)
piroxicam  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
prochloraz  (ISO)
progesterone  (ISO)
propiconazole  (EXP,ISO)
quercetin  (ISO)
quinolin-8-ol  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
ritodrine  (EXP)
rotenone  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sulindac sulfide  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
tebuconazole  (EXP,ISO)
testosterone  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP,ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
triadimefon  (EXP)
trichloroethene  (EXP)
triphenyl phosphate  (ISO)
tunicamycin  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vorinostat  (ISO)
xylitol  (ISO)
Yessotoxin  (ISO)
zoledronic acid  (ISO)
zymosterol  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15489334   PMID:15840001   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:17967808   PMID:18799693   PMID:21267068   PMID:21305474   PMID:21677750   PMID:21873635   PMID:23125191   PMID:24154525   PMID:25147951   PMID:26108225  
PMID:28203794   PMID:30582412   PMID:32968282  


Genomics

Comparative Map Data
Msmo1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39865,171,157 - 65,186,822 (-)NCBIGRCm39mm39
GRCm38864,718,123 - 64,733,578 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl864,718,139 - 64,733,792 (-)EnsemblGRCm38mm10GRCm38
MGSCv37867,196,942 - 67,212,375 (-)NCBIGRCm37mm9NCBIm37
MGSCv36867,610,337 - 67,625,770 (-)NCBImm8
Celera867,282,044 - 67,297,655 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
MSMO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl4165,327,667 - 165,343,164 (+)EnsemblGRCh38hg38GRCh38
GRCh384165,327,669 - 165,343,164 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh374166,248,818 - 166,264,316 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364166,468,268 - 166,483,675 (+)NCBINCBI36hg18NCBI36
Build 344166,606,462 - 166,621,472NCBI
Celera4163,584,245 - 163,599,652 (+)NCBI
Cytogenetic Map4q32.3NCBI
HuRef4162,000,630 - 162,016,125 (+)NCBIHuRef
CHM1_14166,225,277 - 166,240,769 (+)NCBICHM1_1
Msmo1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01626,859,441 - 26,875,880 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1626,859,397 - 26,875,973 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01626,738,367 - 26,754,806 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41626,698,324 - 26,716,247 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11626,698,321 - 26,716,245 (+)NCBI
Celera1625,065,073 - 25,082,320 (+)NCBICelera
Cytogenetic Map16p13NCBI
Msmo1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540339,989,409 - 40,009,890 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540339,991,528 - 40,009,047 (-)NCBIChiLan1.0ChiLan1.0
MSMO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14169,606,760 - 169,622,218 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4169,606,809 - 169,622,212 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04157,523,099 - 157,538,508 (+)NCBIMhudiblu_PPA_v0panPan3
MSMO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 EnsemblX8,144,335 - 8,145,216 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1561,293,769 - 61,307,285 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11561,293,769 - 61,307,285 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Msmo1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936555664,171 - 678,082 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MSMO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl843,726,855 - 43,744,714 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1843,726,834 - 43,745,784 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2845,557,631 - 45,618,277 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MSMO1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl7111,688,604 - 111,704,849 (+)Ensembl
ChlSab1.17111,688,591 - 111,704,765 (+)NCBI
Msmo1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475811,629,824 - 11,644,071 (-)NCBI

Position Markers
RH126400  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38864,718,180 - 64,718,425UniSTSGRCm38
MGSCv37867,196,977 - 67,197,222UniSTSGRCm37
Celera867,282,079 - 67,282,324UniSTS
Cytogenetic Map8B3.1UniSTS
Whitehead/MRC_RH8705.87UniSTS
Sc4mol  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38864,719,102 - 64,720,425UniSTSGRCm38
Celera867,283,001 - 67,284,327UniSTS
Cytogenetic Map8B3.1UniSTS
cM Map832.3UniSTS
Sc4mol  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B3.1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81472316071045600Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83201654471287993Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3201654471287993Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3201654471287993Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3201654471287993Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83383736267837502Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:647
Count of miRNA genes:386
Interacting mature miRNAs:446
Transcripts:ENSMUST00000034015, ENSMUST00000132013, ENSMUST00000135943, ENSMUST00000140861, ENSMUST00000141021, ENSMUST00000145216, ENSMUST00000147419
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_025436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC152168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FB336812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HH768151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000034015   ⟹   ENSMUSP00000034015
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl864,718,139 - 64,733,792 (-)Ensembl
RefSeq Acc Id: ENSMUST00000132013
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl864,718,227 - 64,733,578 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135943
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl864,724,981 - 64,733,548 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140861
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl864,718,624 - 64,721,931 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141021   ⟹   ENSMUSP00000121070
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl864,727,650 - 64,733,548 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145216
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl864,718,209 - 64,733,581 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147419   ⟹   ENSMUSP00000117545
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl864,723,665 - 64,731,059 (-)Ensembl
RefSeq Acc Id: NM_025436   ⟹   NP_079712
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39865,171,157 - 65,186,612 (-)NCBI
GRCm38864,718,123 - 64,733,578 (-)NCBI
MGSCv37867,196,942 - 67,212,375 (-)RGD
Celera867,282,044 - 67,297,655 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036154232   ⟹   XP_036010125
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39865,171,173 - 65,186,822 (-)NCBI
RefSeq Acc Id: XM_036154233   ⟹   XP_036010126
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39865,173,375 - 65,186,822 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_079712   ⟸   NM_025436
- UniProtKB: Q9CRA4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000117545   ⟸   ENSMUST00000147419
RefSeq Acc Id: ENSMUSP00000034015   ⟸   ENSMUST00000034015
RefSeq Acc Id: ENSMUSP00000121070   ⟸   ENSMUST00000141021
RefSeq Acc Id: XP_036010125   ⟸   XM_036154232
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036010126   ⟸   XM_036154233
- Peptide Label: isoform X2
Protein Domains
Fatty acid hydroxylase

Promoters
RGD ID:8667169
Promoter ID:EPDNEW_M11616
Type:initiation region
Name:Msmo1_1
Description:Mus musculus methylsterol monoxygenase 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38864,733,578 - 64,733,638EPDNEW
RGD ID:6843693
Promoter ID:MM_KWN:54530
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000054139
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36867,200,641 - 67,201,442 (-)MPROMDB
RGD ID:6843694
Promoter ID:MM_KWN:54531
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   MEF_B6
Transcripts:OTTMUST00000074337
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36867,209,491 - 67,210,797 (-)MPROMDB
RGD ID:6843692
Promoter ID:MM_KWN:54532
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000054134,   OTTMUST00000054135,   OTTMUST00000054136,   OTTMUST00000054138,   UC009LUY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36867,212,246 - 67,212,767 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1913484 AgrOrtholog
Ensembl Genes ENSMUSG00000031604 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000034015 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000117545 UniProtKB/TrEMBL
  ENSMUSP00000121070 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000034015 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000141021 UniProtKB/TrEMBL
  ENSMUST00000147419 UniProtKB/TrEMBL
InterPro Fatty_acid_hydroxylase UniProtKB/Swiss-Prot
KEGG Report mmu:66234 UniProtKB/Swiss-Prot
MGD MGI:1913484 ENTREZGENE
NCBI Gene 66234 ENTREZGENE
Pfam FA_hydroxylase UniProtKB/Swiss-Prot
PhenoGen Msmo1 PhenoGen
UniGene Mm.30119 ENTREZGENE
UniProt D3YTN3_MOUSE UniProtKB/TrEMBL
  D3Z458_MOUSE UniProtKB/TrEMBL
  MSMO1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q543V8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-05-07 Msmo1  methylsterol monoxygenase 1  Sc4mol  sterol-C4-methyl oxidase-like  Symbol and/or name change 5135510 APPROVED