Gmip (Gem-interacting protein) - Rat Genome Database

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Gene: Gmip (Gem-interacting protein) Mus musculus
Analyze
Symbol: Gmip
Name: Gem-interacting protein
RGD ID: 1558305
MGI Page MGI
Description: Predicted to enable GTPase activator activity. Predicted to be involved in intracellular signal transduction; negative regulation of GTPase activity; and negative regulation of small GTPase mediated signal transduction. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in plasma membrane. Is expressed in brain; gonad; and thyroid gland. Orthologous to human GMIP (GEM interacting protein).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 5031419I10Rik
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,260,912 - 70,274,520 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl870,261,329 - 70,274,520 (+)EnsemblGRCm39 Ensembl
GRCm38869,808,298 - 69,821,870 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl869,808,679 - 69,821,870 (+)EnsemblGRCm38mm10GRCm38
MGSCv37872,332,586 - 72,345,769 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36872,737,676 - 72,750,859 (+)NCBIMGSCv36mm8
Celera872,359,699 - 72,372,861 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map833.88NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 65 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GmipMouse1,2-dimethylhydrazine increases expressionEXP 64804641,2-Dimethylhydrazine results in increased expression of GMIP mRNACTDPMID:22206623
GmipMouse17alpha-ethynylestradiol affects expressionEXP 6480464Ethinyl Estradiol affects the expression of GMIP mRNACTDPMID:17555576
GmipMouse17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of GMIP mRNACTDPMID:17942748
GmipMouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of GMIP mRNACTDPMID:17942748
GmipMouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of GMIP mRNACTDPMID:17942748
GmipMouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:15655776480464Tetrachlorodibenzodioxin results in increased expression of GMIP mRNACTDPMID:32109520|PMID:33387578|PMID:34747641
GmipMouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of GMIP mRNACTDPMID:21570461
GmipMouse2-hydroxypropanoic acid decreases expressionISORGD:13449536480464Lactic Acid results in decreased expression of GMIP mRNACTDPMID:30851411
GmipMouse3,4-methylenedioxymethamphetamine increases expressionEXP 6480464N-Methyl-3,4-methylenedioxyamphetamine results in increased expression of GMIP mRNACTDPMID:26251327
GmipMouse3-chloropropane-1,2-diol increases expressionISORGD:15655776480464alpha-Chlorohydrin results in increased expression of GMIP proteinCTDPMID:34915118
GmipMouse4,4'-sulfonyldiphenol decreases methylationISORGD:13449536480464bisphenol S results in decreased methylation of GMIP geneCTDPMID:31601247
GmipMouseacetamide increases expressionISORGD:15655776480464acetamide results in increased expression of GMIP mRNACTDPMID:31881176
GmipMouseacrylamide decreases expressionISORGD:15655776480464Acrylamide results in decreased expression of GMIP mRNACTDPMID:28959563
GmipMouseacrylamide decreases expressionISORGD:13449536480464Acrylamide results in decreased expression of GMIP mRNACTDPMID:32763439
GmipMouseaflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of GMIP mRNACTDPMID:19770486
GmipMouseaflatoxin B1 increases expressionISORGD:13449536480464Aflatoxin B1 results in increased expression of GMIP mRNACTDPMID:22100608
GmipMouseall-trans-retinoic acid increases expressionISORGD:15655776480464Tretinoin results in increased expression of GMIP mRNACTDPMID:20488242
GmipMouseall-trans-retinoic acid increases expressionISORGD:13449536480464Tretinoin results in increased expression of GMIP mRNACTDPMID:33167477
GmipMousealpha-Zearalanol increases expressionISORGD:15655776480464Zeranol results in increased expression of GMIP mRNACTDPMID:35163327
GmipMouseantirheumatic drug decreases expressionISORGD:13449536480464Antirheumatic Agents results in decreased expression of GMIP mRNACTDPMID:24449571

1 to 20 of 65 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GmipMouseintracellular signal transduction involved_inIEAUniProtKB:Q9P107|ensembl:ENSP000002035562290270 EnsemblGO_REF:0000107
GmipMouseintracellular signal transduction involved_inISOUniProtKB:Q9P1072290270 GO_CentralGO_REF:0000119
GmipMouseintracellular signal transduction involved_inIBAPANTHER:PTN002689833|UniProtKB:Q9P1072290270 GO_CentralGO_REF:0000033
GmipMousenegative regulation of GTPase activity involved_inISOUniProtKB:Q9P1072290270 GO_CentralGO_REF:0000119
GmipMousenegative regulation of small GTPase mediated signal transduction involved_inIBAPANTHER:PTN004470214|MGI:1922647|SGD:S000005660|UniProtKB:P42331|SGD:S0000027972290270 GO_CentralGO_REF:0000033
GmipMouseregulation of small GTPase mediated signal transduction involved_inIEAARBA:ARBA000272802290270 UniProtGO_REF:0000117
GmipMousesmall GTPase-mediated signal transduction involved_inISORGD:13449539068941 PMID:12093360HGNC-UCLPMID:12093360

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GmipMousecytosol located_inISOUniProtKB:Q9P1072290270 GO_CentralGO_REF:0000119
GmipMousecytosol located_inIEAUniProtKB:A0A024R7N1|UniProtKB:Q9P107|ensembl:ENSP000002035562290270 EnsemblGO_REF:0000107
GmipMousenucleoplasm located_inISOUniProtKB:Q9P1072290270 GO_CentralGO_REF:0000119
GmipMousenucleoplasm located_inIEAUniProtKB:A0A024R7N1|UniProtKB:Q9P107|ensembl:ENSP000002035562290270 EnsemblGO_REF:0000107
GmipMouseplasma membrane is_active_inIBAPANTHER:PTN002689833|UniProtKB:Q9P1072290270 GO_CentralGO_REF:0000033
GmipMouseplasma membrane located_inIEAUniProtKB:A0A024R7N1|UniProtKB:Q9P107|ensembl:ENSP000002035562290270 EnsemblGO_REF:0000107
GmipMouseplasma membrane located_inISOUniProtKB:Q9P1072290270 GO_CentralGO_REF:0000119

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GmipMouseGTPase activator activity enablesIBAPANTHER:PTN004470214|PomBase:SPBC17F3.01c|UniProtKB:Q9P107|SGD:S000002797|WB:WBGene00014051|MGI:1922647|SGD:S0000056602290270 GO_CentralGO_REF:0000033
GmipMouseGTPase activator activity enablesIEAUniProtKB:Q9P107|ensembl:ENSP000002035562290270 EnsemblGO_REF:0000107
GmipMouseGTPase activator activity enablesISOUniProtKB:Q9P1072290270 GO_CentralGO_REF:0000119
GmipMouseprotein binding enablesISOUniProtKB:Q926199068941 PMID:32296183IntActPMID:32296183
GmipMouseprotein binding enablesISOUniProtKB:P550409068941 PMID:12093360HGNC-UCLPMID:12093360
GmipMousezinc ion binding enablesIEAUniProtKB-KW:KW-08632290270 UniProtGO_REF:0000043

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GmipMousedecreased circulating fructosamine level  IEA 5509061 MGI 

#
Reference Title
Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15142957   PMID:15345747   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:21677750  
PMID:21873635   PMID:24194600   PMID:25074242   PMID:30196744   PMID:32325033   PMID:32554809   PMID:38355793  



Gmip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,260,912 - 70,274,520 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl870,261,329 - 70,274,520 (+)EnsemblGRCm39 Ensembl
GRCm38869,808,298 - 69,821,870 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl869,808,679 - 69,821,870 (+)EnsemblGRCm38mm10GRCm38
MGSCv37872,332,586 - 72,345,769 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36872,737,676 - 72,750,859 (+)NCBIMGSCv36mm8
Celera872,359,699 - 72,372,861 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map833.88NCBI
GMIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381919,629,476 - 19,643,657 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1919,629,476 - 19,643,657 (-)EnsemblGRCh38hg38GRCh38
GRCh371919,740,285 - 19,754,466 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361919,601,285 - 19,615,455 (-)NCBINCBI36Build 36hg18NCBI36
Build 341919,601,284 - 19,615,417NCBI
Celera1919,644,360 - 19,658,530 (-)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1919,302,706 - 19,316,876 (-)NCBIHuRef
CHM1_11919,741,371 - 19,755,541 (-)NCBICHM1_1
T2T-CHM13v2.01919,766,986 - 19,781,167 (-)NCBIT2T-CHM13v2.0
Gmip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81619,634,630 - 19,648,916 (-)NCBIGRCr8
mRatBN7.21619,600,723 - 19,614,459 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1619,600,723 - 19,614,027 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1619,642,529 - 19,655,828 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01620,780,498 - 20,793,817 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01619,695,510 - 19,708,809 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01621,349,652 - 21,363,412 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1621,349,652 - 21,362,955 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01621,263,641 - 21,277,396 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41620,086,046 - 20,099,349 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1619,789,752 - 19,803,055 (-)NCBICelera
Cytogenetic Map16p14NCBI
Gmip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555242,380,093 - 2,389,411 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555242,380,099 - 2,389,154 (+)NCBIChiLan1.0ChiLan1.0
GMIP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22024,490,608 - 24,504,827 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11923,497,062 - 23,511,273 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01919,066,700 - 19,080,904 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11920,063,086 - 20,076,786 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1920,063,086 - 20,076,786 (-)Ensemblpanpan1.1panPan2
GMIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12043,636,639 - 43,646,093 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2043,636,352 - 43,645,795 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2043,552,223 - 43,561,679 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02044,122,090 - 44,131,757 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2044,121,891 - 44,131,752 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12043,360,010 - 43,369,465 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02043,769,304 - 43,778,970 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02044,045,203 - 44,054,662 (+)NCBIUU_Cfam_GSD_1.0
Gmip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118202,311,583 - 202,322,865 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365961,860,853 - 1,871,579 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365961,860,766 - 1,872,004 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GMIP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl258,286,934 - 58,296,261 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1258,286,877 - 58,296,262 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2258,399,771 - 58,409,129 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GMIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1618,088,545 - 18,102,718 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl618,088,098 - 18,101,118 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660741,196,111 - 1,210,503 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gmip
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249082,358,159 - 2,367,380 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249082,358,409 - 2,367,505 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Gmip
1098 total Variants

Predicted Target Of
Summary Value
Count of predictions:1829
Count of miRNA genes:725
Interacting mature miRNAs:933
Transcripts:ENSMUST00000036074, ENSMUST00000123453, ENSMUST00000127114, ENSMUST00000138269, ENSMUST00000142659, ENSMUST00000143744, ENSMUST00000144540, ENSMUST00000154903, ENSMUST00000156620
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 30 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse

1 to 10 of 30 rows
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS






1 to 22 of 22 rows
RefSeq Transcripts NM_198101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC157564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC158564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 22 of 22 rows

Ensembl Acc Id: ENSMUST00000036074   ⟹   ENSMUSP00000045676
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,261,329 - 70,274,520 (+)Ensembl
GRCm38.p6 Ensembl869,808,679 - 69,821,870 (+)Ensembl
Ensembl Acc Id: ENSMUST00000123453   ⟹   ENSMUSP00000116542
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,261,340 - 70,271,622 (+)Ensembl
GRCm38.p6 Ensembl869,808,690 - 69,818,972 (+)Ensembl
Ensembl Acc Id: ENSMUST00000127114
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,269,362 - 70,270,241 (+)Ensembl
GRCm38.p6 Ensembl869,816,712 - 69,817,591 (+)Ensembl
Ensembl Acc Id: ENSMUST00000138269
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,266,536 - 70,268,886 (+)Ensembl
GRCm38.p6 Ensembl869,813,886 - 69,816,236 (+)Ensembl
Ensembl Acc Id: ENSMUST00000142659   ⟹   ENSMUSP00000114525
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,270,478 - 70,271,627 (+)Ensembl
GRCm38.p6 Ensembl869,817,828 - 69,818,977 (+)Ensembl
Ensembl Acc Id: ENSMUST00000143744
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,263,187 - 70,266,504 (+)Ensembl
GRCm38.p6 Ensembl869,810,537 - 69,813,854 (+)Ensembl
Ensembl Acc Id: ENSMUST00000144540
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,270,714 - 70,273,983 (+)Ensembl
GRCm38.p6 Ensembl869,818,064 - 69,821,333 (+)Ensembl
Ensembl Acc Id: ENSMUST00000154903
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,265,915 - 70,266,752 (+)Ensembl
GRCm38.p6 Ensembl869,813,265 - 69,814,102 (+)Ensembl
Ensembl Acc Id: ENSMUST00000156620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl870,263,343 - 70,264,319 (+)Ensembl
GRCm38.p6 Ensembl869,810,693 - 69,811,669 (+)Ensembl
RefSeq Acc Id: NM_198101   ⟹   NP_932769
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,261,337 - 70,274,520 (+)NCBI
GRCm38869,808,687 - 69,821,870 (+)NCBI
MGSCv37872,332,586 - 72,345,769 (+)RGD
Celera872,359,699 - 72,372,861 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509797   ⟹   XP_006509860
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,261,194 - 70,274,310 (+)NCBI
GRCm38869,808,558 - 69,821,555 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509798   ⟹   XP_006509861
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,261,195 - 70,274,310 (+)NCBI
GRCm38869,808,558 - 69,821,555 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509799   ⟹   XP_006509862
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,260,912 - 70,271,429 (+)NCBI
GRCm38869,808,298 - 69,818,779 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243856   ⟹   XP_030099716
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,262,276 - 70,274,310 (+)NCBI
GRCm38869,809,625 - 69,821,555 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243857   ⟹   XP_030099717
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,260,923 - 70,271,811 (+)NCBI
GRCm38869,808,557 - 69,819,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154385   ⟹   XP_036010278
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,261,206 - 70,274,310 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154386   ⟹   XP_036010279
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,261,206 - 70,274,310 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003947356
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,260,912 - 70,274,310 (+)NCBI
GRCm38869,808,298 - 69,821,555 (+)NCBI
Sequence:
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: NP_932769   ⟸   NM_198101
- UniProtKB: Q6P9S3 (UniProtKB/Swiss-Prot),   Q6PGG2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006509862   ⟸   XM_006509799
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006509860   ⟸   XM_006509797
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006509861   ⟸   XM_006509798
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030099717   ⟸   XM_030243857
- Peptide Label: isoform X4
F-BAR   Rho-GAP

Name Modeler Protein Id AA Range Protein Structure
AF-Q6PGG2-F1-model_v2 AlphaFold Q6PGG2 1-971 view protein structure

RGD ID:8667243
Promoter ID:EPDNEW_M11653
Type:initiation region
Name:Gmip_1
Description:Mus musculus Gem-interacting protein , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38869,808,707 - 69,808,767EPDNEW
RGD ID:6843244
Promoter ID:MM_KWN:54637
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:OTTMUST00000067392,   UC009LXS.1,   UC009LXU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,331,586 - 72,332,852 (+)MPROMDB
RGD ID:6843246
Promoter ID:MM_KWN:54638
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:OTTMUST00000067493,   OTTMUST00000067494
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,334,236 - 72,334,742 (+)MPROMDB
RGD ID:6843247
Promoter ID:MM_KWN:54639
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Lung,   Spleen
Transcripts:OTTMUST00000067495,   OTTMUST00000067496
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,336,936 - 72,337,842 (+)MPROMDB
RGD ID:6848886
Promoter ID:MM_TRO:9535
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell
Transcripts:MTR013125.8.1154.3
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,337,799 - 72,338,299 (+)MPROMDB
RGD ID:6843249
Promoter ID:MM_KWN:54640
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour
Transcripts:OTTMUST00000067497
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,340,036 - 72,340,537 (+)MPROMDB
RGD ID:6843245
Promoter ID:MM_KWN:54641
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:OTTMUST00000067492,   OTTMUST00000067498
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,340,956 - 72,341,887 (+)MPROMDB


1 to 38 of 38 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000036246 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000036074 ENTREZGENE
  ENSMUST00000036074.15 UniProtKB/Swiss-Prot
  ENSMUST00000123453 ENTREZGENE
  ENSMUST00000123453.2 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.555.10 UniProtKB/Swiss-Prot
  1.20.1270.60 UniProtKB/Swiss-Prot
  3.30.60.20 UniProtKB/Swiss-Prot
InterPro AH/BAR_dom_sf UniProtKB/Swiss-Prot
  C1-like_sf UniProtKB/Swiss-Prot
  F_BAR UniProtKB/Swiss-Prot
  GMIP/FCHO2-like_FCH UniProtKB/Swiss-Prot
  PE/DAG-bd UniProtKB/Swiss-Prot
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot
  RhoGAP UniProtKB/Swiss-Prot
  RhoGAP_dom UniProtKB/Swiss-Prot
KEGG Report mmu:78816 UniProtKB/Swiss-Prot
MGD MGI:1926066 ENTREZGENE
NCBI Gene 78816 ENTREZGENE
PANTHER GEM-INTERACTING PROTEIN UniProtKB/Swiss-Prot
  SPERMATHECAL PHYSIOLOGY VARIANT UniProtKB/Swiss-Prot
Pfam GMIP-like_FCH UniProtKB/Swiss-Prot
  RhoGAP UniProtKB/Swiss-Prot
PhenoGen Gmip PhenoGen
PROSITE F_BAR UniProtKB/Swiss-Prot
  RHOGAP UniProtKB/Swiss-Prot
  ZF_DAG_PE_1 UniProtKB/Swiss-Prot
  ZF_DAG_PE_2 UniProtKB/Swiss-Prot
SMART RhoGAP UniProtKB/Swiss-Prot
  SM00109 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF103657 UniProtKB/Swiss-Prot
  SSF48350 UniProtKB/Swiss-Prot
  SSF57889 UniProtKB/Swiss-Prot
UniProt F7AIU6_MOUSE UniProtKB/TrEMBL
  GMIP_MOUSE UniProtKB/Swiss-Prot
  Q6P9S3 ENTREZGENE
  Q6PGG2 ENTREZGENE
UniProt Secondary Q6P9S3 UniProtKB/Swiss-Prot
1 to 38 of 38 rows