Sugp2 (SURP and G patch domain containing 2) - Rat Genome Database
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Gene: Sugp2 (SURP and G patch domain containing 2) Mus musculus
Analyze
Symbol: Sugp2
Name: SURP and G patch domain containing 2
RGD ID: 1314433
MGI Page MGI
Description: Predicted to have RNA binding activity. Predicted to be involved in RNA splicing and mRNA processing. Predicted to localize to nuclear body. Is expressed in mandible; maxilla; orbito-sphenoid; and rib. Orthologous to human SUGP2 (SURP and G-patch domain containing 2); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: arginine/serine-rich-splicing factor 14; MGC66544; mKIAA0365; putative splicing factor, arginine/serine-rich 14; serine/arginine-rich splicing factor 14; Sfr; Sfrs14; splicing factor, arginine/serine-rich 14; Srs; Srsf14; SURP and G-patch domain-containing protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,686,838 - 70,715,755 (+)NCBIGRCm39mm39
GRCm38870,234,188 - 70,263,105 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,234,226 - 70,279,915 (+)EnsemblGRCm38mm10GRCm38
MGSCv37872,758,125 - 72,787,004 (+)NCBIGRCm37mm9NCBIm37
MGSCv36873,163,222 - 73,192,094 (+)NCBImm8
Celera872,790,767 - 72,819,602 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nuclear body  (ISO)
nucleoplasm  (ISO)
nucleus  (IEA)

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12520002   PMID:12594045   PMID:12904583   PMID:14610273  
PMID:15489334   PMID:15840001   PMID:16141072   PMID:16141073   PMID:17131200   PMID:18799693   PMID:21267068   PMID:21677750   PMID:23818142   PMID:31138677  


Genomics

Comparative Map Data
Sugp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,686,838 - 70,715,755 (+)NCBIGRCm39mm39
GRCm38870,234,188 - 70,263,105 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,234,226 - 70,279,915 (+)EnsemblGRCm38mm10GRCm38
MGSCv37872,758,125 - 72,787,004 (+)NCBIGRCm37mm9NCBIm37
MGSCv36873,163,222 - 73,192,094 (+)NCBImm8
Celera872,790,767 - 72,819,602 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
SUGP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1918,990,888 - 19,034,023 (-)EnsemblGRCh38hg38GRCh38
GRCh381918,990,887 - 19,034,038 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371919,101,697 - 19,144,861 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361918,962,702 - 19,005,368 (-)NCBINCBI36hg18NCBI36
Celera1919,006,510 - 19,049,196 (-)NCBI
Cytogenetic Map19p13.11NCBI
HuRef1918,665,852 - 18,708,164 (-)NCBIHuRef
CHM1_11919,101,375 - 19,144,548 (-)NCBICHM1_1
Sugp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01620,908,162 - 20,939,574 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,910,177 - 20,939,545 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,758,637 - 20,789,858 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,644,374 - 19,673,741 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11619,655,740 - 19,674,045 (-)NCBI
Celera1619,350,650 - 19,380,138 (-)NCBICelera
Cytogenetic Map16p14NCBI
Sugp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555242,710,656 - 2,732,203 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555242,710,656 - 2,731,849 (+)NCBIChiLan1.0ChiLan1.0
SUGP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11919,433,192 - 19,468,116 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1919,436,661 - 19,473,103 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01918,429,029 - 18,471,958 (-)NCBIMhudiblu_PPA_v0panPan3
SUGP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2044,097,405 - 44,129,842 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12044,097,273 - 44,132,846 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Sugp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365962,341,103 - 2,375,755 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SUGP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl258,828,251 - 58,865,860 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1258,828,009 - 58,865,859 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2258,626,985 - 58,664,673 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SUGP2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1617,453,085 - 17,496,161 (-)NCBI
ChlSab1.1 Ensembl617,455,840 - 17,492,313 (-)Ensembl
Sugp2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249081,991,529 - 2,013,694 (-)NCBI

Position Markers
AA987175  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,261,572 - 70,261,700UniSTSGRCm38
MGSCv37872,785,471 - 72,785,599UniSTSGRCm37
Celera872,818,069 - 72,818,197UniSTS
Cytogenetic Map8B3.3UniSTS
Whitehead/MRC_RH8741.25UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81472316071045600Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83201654471287993Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3201654471287993Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3201654471287993Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3201654471287993Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3927
Count of miRNA genes:864
Interacting mature miRNAs:1186
Transcripts:ENSMUST00000093458, ENSMUST00000126239, ENSMUST00000129402, ENSMUST00000130492, ENSMUST00000131489, ENSMUST00000133924, ENSMUST00000135640, ENSMUST00000136391, ENSMUST00000136758, ENSMUST00000145078, ENSMUST00000148378, ENSMUST00000155771, ENSMUST00000156330, ENSMUST00000164403
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001168290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_165051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_165052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF518875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC042763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC047383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE981284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000093458   ⟹   ENSMUSP00000091167
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,234,233 - 70,263,105 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126239   ⟹   ENSMUSP00000118748
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,257,202 - 70,264,296 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129402
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,273,592 - 70,279,914 (+)Ensembl
RefSeq Acc Id: ENSMUST00000130492
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,257,476 - 70,259,403 (+)Ensembl
RefSeq Acc Id: ENSMUST00000131489   ⟹   ENSMUSP00000114833
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,234,226 - 70,263,105 (+)Ensembl
RefSeq Acc Id: ENSMUST00000133924
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,259,752 - 70,263,105 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135640
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,248,144 - 70,251,868 (+)Ensembl
RefSeq Acc Id: ENSMUST00000136391
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,260,442 - 70,263,105 (+)Ensembl
RefSeq Acc Id: ENSMUST00000136758
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,234,623 - 70,254,763 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145078   ⟹   ENSMUSP00000114403
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,234,617 - 70,242,651 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148378
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,252,064 - 70,279,915 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155771   ⟹   ENSMUSP00000120271
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,236,388 - 70,242,903 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156330
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,243,584 - 70,258,270 (+)Ensembl
RefSeq Acc Id: ENSMUST00000164403   ⟹   ENSMUSP00000128029
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,234,226 - 70,261,042 (+)Ensembl
RefSeq Acc Id: NM_001168290   ⟹   NP_001161762
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,855 - 70,713,701 (+)NCBI
GRCm38870,234,205 - 70,261,051 (+)NCBI
MGSCv37872,758,125 - 72,787,004 (+)RGD
Celera872,790,767 - 72,819,602 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_172755   ⟹   NP_766343
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,855 - 70,715,755 (+)NCBI
GRCm38870,234,205 - 70,263,105 (+)NCBI
MGSCv37872,758,125 - 72,787,004 (+)RGD
Celera872,790,767 - 72,819,602 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_165051
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,855 - 70,715,755 (+)NCBI
GRCm38870,234,205 - 70,263,105 (+)NCBI
RefSeq Acc Id: NR_165052
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,855 - 70,715,755 (+)NCBI
GRCm38870,234,205 - 70,263,105 (+)NCBI
RefSeq Acc Id: XM_036153946   ⟹   XP_036009839
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,848 - 70,715,755 (+)NCBI
RefSeq Acc Id: XM_036153947   ⟹   XP_036009840
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,852 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934807
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,852 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934808
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,859 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934809
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,687,301 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934810
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,838 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934811
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,838 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934812
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,838 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934813
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,838 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934814
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,838 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934815
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,686,838 - 70,715,755 (+)NCBI
RefSeq Acc Id: XR_004934816
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,689,455 - 70,715,755 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_766343   ⟸   NM_172755
- UniProtKB: Q8CH09 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161762   ⟸   NM_001168290
- UniProtKB: Q8CH09 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000114403   ⟸   ENSMUST00000145078
RefSeq Acc Id: ENSMUSP00000128029   ⟸   ENSMUST00000164403
RefSeq Acc Id: ENSMUSP00000091167   ⟸   ENSMUST00000093458
RefSeq Acc Id: ENSMUSP00000114833   ⟸   ENSMUST00000131489
RefSeq Acc Id: ENSMUSP00000118748   ⟸   ENSMUST00000126239
RefSeq Acc Id: ENSMUSP00000120271   ⟸   ENSMUST00000155771
RefSeq Acc Id: XP_036009839   ⟸   XM_036153946
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036009840   ⟸   XM_036153947
- Peptide Label: isoform X1
Protein Domains
G-patch

Promoters
RGD ID:8667289
Promoter ID:EPDNEW_M11675
Type:multiple initiation site
Name:Sugp2_1
Description:Mus musculus SURP and G patch domain containing 2 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11677  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38870,234,210 - 70,234,270EPDNEW
RGD ID:8667297
Promoter ID:EPDNEW_M11677
Type:initiation region
Name:Sugp2_2
Description:Mus musculus SURP and G patch domain containing 2 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11675  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38870,234,561 - 70,234,621EPDNEW
RGD ID:6843706
Promoter ID:MM_KWN:54678
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_2Hour,   MEF_B4,   Spleen
Transcripts:NM_172755,   OTTMUST00000074654,   OTTMUST00000074661,   UC009LZK.1,   UC009LZL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,758,059 - 72,758,559 (+)MPROMDB
RGD ID:6843707
Promoter ID:MM_KWN:54679
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3
Transcripts:OTTMUST00000074660
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,759,874 - 72,760,374 (+)MPROMDB
RGD ID:6843708
Promoter ID:MM_KWN:54681
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2
Transcripts:OTTMUST00000074662
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,771,286 - 72,771,786 (+)MPROMDB
RGD ID:6843718
Promoter ID:MM_KWN:54683
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:OTTMUST00000074663,   UC009LZP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,781,046 - 72,781,546 (+)MPROMDB
RGD ID:6843712
Promoter ID:MM_KWN:54684
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney
Transcripts:OTTMUST00000074664
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,782,739 - 72,783,239 (+)MPROMDB
RGD ID:6843715
Promoter ID:MM_KWN:54685
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   Spleen
Transcripts:OTTMUST00000074665
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,783,864 - 72,784,364 (+)MPROMDB
RGD ID:6843705
Promoter ID:MM_KWN:54686
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   ES_Cell
Transcripts:OTTMUST00000074658
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,796,809 - 72,797,309 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2678085 AgrOrtholog
Ensembl Genes ENSMUSG00000036054 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000091167 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000114403 UniProtKB/TrEMBL
  ENSMUSP00000114833 UniProtKB/Swiss-Prot
  ENSMUSP00000118748 UniProtKB/TrEMBL
  ENSMUSP00000120271 UniProtKB/TrEMBL
  ENSMUSP00000128029 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000093458 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000126239 UniProtKB/TrEMBL
  ENSMUST00000131489 UniProtKB/Swiss-Prot
  ENSMUST00000145078 UniProtKB/TrEMBL
  ENSMUST00000155771 UniProtKB/TrEMBL
  ENSMUST00000164403 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.10.790 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro G_patch_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SUGP1/2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Surp UniProtKB/Swiss-Prot
  SWAP/Surp_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:234373 UniProtKB/Swiss-Prot
MGD MGI:2678085 ENTREZGENE
NCBI Gene 234373 ENTREZGENE
PANTHER PTHR23340 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam G-patch UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Surp UniProtKB/Swiss-Prot
PhenoGen Sugp2 PhenoGen
PROSITE G_PATCH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SURP UniProtKB/Swiss-Prot
SMART G_patch UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SWAP UniProtKB/Swiss-Prot
Superfamily-SCOP SSF109905 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.284505 ENTREZGENE
UniProt D3YVJ0_MOUSE UniProtKB/TrEMBL
  D3Z0I4_MOUSE UniProtKB/TrEMBL
  F6X398_MOUSE UniProtKB/TrEMBL
  Q80U25_MOUSE UniProtKB/TrEMBL
  Q8CH09 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q6PG19 UniProtKB/Swiss-Prot
  Q80UY8 UniProtKB/Swiss-Prot
  Q8BY32 UniProtKB/Swiss-Prot
  Q8CFM0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Sugp2  SURP and G patch domain containing 2  Sfrs14  splicing factor, arginine/serine-rich 14  Symbol and/or name change 5135510 APPROVED