Crtc1 (CREB regulated transcription coactivator 1) - Rat Genome Database
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Gene: Crtc1 (CREB regulated transcription coactivator 1) Mus musculus
Analyze
Symbol: Crtc1
Name: CREB regulated transcription coactivator 1
RGD ID: 1614777
MGI Page MGI
Description: Is expressed in limb and limb mesenchyme. Used to study major depressive disorder. Orthologous to human CRTC1 (CREB regulated transcription coactivator 1); INTERACTS WITH 1,2-dichloroethane; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AI413414; CREB-regulated transcription coactivator 1; Mect1; MGC90786; mKIAA0616; mucoepidermoid carcinoma translocated 1; mucoepidermoid carcinoma translocated protein 1 homolog; R74955; TOR; TORC-1; TORC1; transducer of CREB protein 1; transducer of regulated cAMP response element-binding protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,835,002 - 70,892,720 (-)NCBIGRCm39mm39
GRCm39 Ensembl870,835,005 - 70,892,229 (-)Ensembl
GRCm38870,382,352 - 70,439,702 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,382,355 - 70,439,579 (-)EnsemblGRCm38mm10GRCm38
MGSCv37872,906,257 - 72,963,472 (-)NCBIGRCm37mm9NCBIm37
MGSCv36873,311,347 - 73,368,562 (-)NCBImm8
Celera872,938,781 - 72,996,000 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:10922068   PMID:11544199   PMID:12477932   PMID:12520002   PMID:14610273   PMID:14621295   PMID:15489334   PMID:15782199   PMID:16944949   PMID:17284572   PMID:17360587  
PMID:17386266   PMID:18164202   PMID:18587048   PMID:18653778   PMID:18664580   PMID:18758446   PMID:19052232   PMID:19305497   PMID:19734865   PMID:19843540   PMID:19864431   PMID:20059953  
PMID:20068142   PMID:20299527   PMID:20631169   PMID:20691905   PMID:20819186   PMID:20837164   PMID:20925120   PMID:21220102   PMID:21267068   PMID:21677750   PMID:21873635   PMID:21986493  
PMID:22179316   PMID:22457330   PMID:22589249   PMID:22592058   PMID:22770221   PMID:23109424   PMID:23209294   PMID:23223304   PMID:23295457   PMID:23376645   PMID:23447692   PMID:23517912  
PMID:23531613   PMID:23832089   PMID:23993098   PMID:24645666   PMID:24760838   PMID:24801387   PMID:24870234   PMID:24889041   PMID:24982181   PMID:25164809   PMID:25213336   PMID:25277455  
PMID:25737949   PMID:26894960   PMID:26970016   PMID:27060162   PMID:27404284   PMID:27587263   PMID:27606668   PMID:27869139   PMID:28069808   PMID:28076781   PMID:28235073   PMID:28244951  
PMID:28334166   PMID:28636954   PMID:29217834   PMID:29269871   PMID:30503507   PMID:30521840   PMID:30611118   PMID:30697736   PMID:31527310   PMID:31672960   PMID:32325033   PMID:32495040  


Genomics

Comparative Map Data
Crtc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,835,002 - 70,892,720 (-)NCBIGRCm39mm39
GRCm39 Ensembl870,835,005 - 70,892,229 (-)Ensembl
GRCm38870,382,352 - 70,439,702 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,382,355 - 70,439,579 (-)EnsemblGRCm38mm10GRCm38
MGSCv37872,906,257 - 72,963,472 (-)NCBIGRCm37mm9NCBIm37
MGSCv36873,311,347 - 73,368,562 (-)NCBImm8
Celera872,938,781 - 72,996,000 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
CRTC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1918,683,678 - 18,782,333 (+)EnsemblGRCh38hg38GRCh38
GRCh381918,683,621 - 18,782,333 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371918,794,490 - 18,893,143 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361918,655,425 - 18,754,143 (+)NCBINCBI36hg18NCBI36
Build 341918,655,424 - 18,749,762NCBI
Celera1918,696,164 - 18,797,938 (+)NCBI
Cytogenetic Map19p13.11NCBI
HuRef1918,417,854 - 18,457,585 (+)NCBIHuRef
CHM1_11918,853,765 - 18,893,147 (+)NCBICHM1_1
Crtc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21618,988,197 - 19,046,913 (+)NCBI
Rnor_6.0 Ensembl1620,740,826 - 20,794,039 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01620,740,746 - 20,798,145 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01620,593,102 - 20,649,007 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,494,580 - 19,536,787 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1619,179,611 - 19,233,207 (+)NCBICelera
Cytogenetic Map16p14NCBI
Crtc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555242,884,654 - 2,940,815 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555242,884,654 - 2,940,601 (-)NCBIChiLan1.0ChiLan1.0
CRTC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11919,131,488 - 19,228,980 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1919,131,484 - 19,228,980 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01918,123,375 - 18,221,832 (+)NCBIMhudiblu_PPA_v0panPan3
CRTC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2044,319,858 - 44,394,599 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12044,315,021 - 44,394,385 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Crtc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365962,551,621 - 2,625,327 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CRTC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl259,069,334 - 59,157,187 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1259,069,334 - 59,157,196 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2258,823,676 - 58,911,153 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CRTC1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1617,146,954 - 17,246,209 (+)NCBI
Crtc1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249081,814,079 - 1,868,717 (+)NCBI

Position Markers
AI413414  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,382,575 - 70,382,728UniSTSGRCm38
MGSCv37872,906,474 - 72,906,627UniSTSGRCm37
Celera872,938,998 - 72,939,151UniSTS
Cytogenetic Map8B3.3UniSTS
Whitehead/MRC_RH8743.32UniSTS
RH125134  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B3.3UniSTS
UniSTS:235913  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,425,903 - 70,426,105UniSTSGRCm38
MGSCv37872,949,802 - 72,950,004UniSTSGRCm37
Celera872,982,349 - 72,982,551UniSTS
Cytogenetic Map8B3.3UniSTS
AI071469  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38870,382,380 - 70,382,584UniSTSGRCm38
MGSCv37872,906,279 - 72,906,483UniSTSGRCm37
Celera872,938,803 - 72,939,007UniSTS
Cytogenetic Map8B3.3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81472316071045600Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83201654471287993Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3201654471287993Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3201654471287993Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3201654471287993Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84429488078295025Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2539
Count of miRNA genes:804
Interacting mature miRNAs:1059
Transcripts:ENSMUST00000076615, ENSMUST00000125273, ENSMUST00000125613, ENSMUST00000142769, ENSMUST00000153632
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001004062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC158553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC080308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000076615   ⟹   ENSMUSP00000075916
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,382,355 - 70,439,579 (-)Ensembl
RefSeq Acc Id: ENSMUST00000125273
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,397,755 - 70,402,798 (-)Ensembl
RefSeq Acc Id: ENSMUST00000125613
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,404,849 - 70,439,575 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142769
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,382,355 - 70,439,579 (-)Ensembl
RefSeq Acc Id: ENSMUST00000153632
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl870,406,127 - 70,431,285 (-)Ensembl
RefSeq Acc Id: NM_001004062   ⟹   NP_001004062
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,008 - 70,892,223 (-)NCBI
GRCm38870,382,358 - 70,439,573 (-)NCBI
MGSCv37872,906,257 - 72,963,472 (-)RGD
Celera872,938,781 - 72,996,000 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509699   ⟹   XP_006509762
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,720 (-)NCBI
GRCm38870,382,352 - 70,439,654 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006509700   ⟹   XP_006509763
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,720 (-)NCBI
GRCm38870,382,352 - 70,439,630 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006509704   ⟹   XP_006509767
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,352 (-)NCBI
GRCm38870,382,352 - 70,439,702 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242309   ⟹   XP_011240611
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,720 (-)NCBI
GRCm38870,382,352 - 70,439,631 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242310   ⟹   XP_011240612
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,720 (-)NCBI
GRCm38870,382,352 - 70,439,631 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242311   ⟹   XP_011240613
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,720 (-)NCBI
GRCm38870,382,352 - 70,439,642 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242312   ⟹   XP_011240614
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,277 (-)NCBI
GRCm38870,382,352 - 70,439,627 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242313   ⟹   XP_011240615
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,227 (-)NCBI
GRCm38870,382,352 - 70,439,493 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242314   ⟹   XP_011240616
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,845,709 - 70,892,720 (-)NCBI
GRCm38870,393,687 - 70,439,635 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243653   ⟹   XP_030099513
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,250 (-)NCBI
GRCm38870,382,352 - 70,439,609 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154147   ⟹   XP_036010040
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,229 (-)NCBI
RefSeq Acc Id: XM_036154148   ⟹   XP_036010041
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,250 (-)NCBI
RefSeq Acc Id: XM_036154149   ⟹   XP_036010042
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39870,835,002 - 70,892,352 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001004062   ⟸   NM_001004062
- UniProtKB: Q68ED7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006509762   ⟸   XM_006509699
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006509763   ⟸   XM_006509700
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006509767   ⟸   XM_006509704
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_011240613   ⟸   XM_011242311
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011240612   ⟸   XM_011242310
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011240611   ⟸   XM_011242309
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011240614   ⟸   XM_011242312
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_011240615   ⟸   XM_011242313
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011240616   ⟸   XM_011242314
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_030099513   ⟸   XM_030243653
- Peptide Label: isoform X8
RefSeq Acc Id: ENSMUSP00000075916   ⟸   ENSMUST00000076615
RefSeq Acc Id: XP_036010042   ⟸   XM_036154149
- Peptide Label: isoform X11
RefSeq Acc Id: XP_036010041   ⟸   XM_036154148
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036010040   ⟸   XM_036154147
- Peptide Label: isoform X6

Promoters
RGD ID:8667307
Promoter ID:EPDNEW_M11684
Type:multiple initiation site
Name:Crtc1_1
Description:Mus musculus CREB regulated transcription coactivator 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38870,439,590 - 70,439,650EPDNEW
RGD ID:6842975
Promoter ID:MM_KWN:54701
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000052983
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,926,511 - 72,927,011 (-)MPROMDB
RGD ID:6842976
Promoter ID:MM_KWN:54703
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000052982,   OTTMUST00000052985,   OTTMUST00000052986
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36872,963,364 - 72,963,864 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2142523 AgrOrtholog
Ensembl Genes ENSMUSG00000003575 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000075916 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000076615 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro TORC UniProtKB/Swiss-Prot
  TORC_C UniProtKB/Swiss-Prot
  TORC_M UniProtKB/Swiss-Prot
  TORC_N UniProtKB/Swiss-Prot
KEGG Report mmu:382056 UniProtKB/Swiss-Prot
MGD MGI:2142523 ENTREZGENE
NCBI Gene 382056 ENTREZGENE
PANTHER PTHR13589 UniProtKB/Swiss-Prot
Pfam TORC_C UniProtKB/Swiss-Prot
  TORC_M UniProtKB/Swiss-Prot
  TORC_N UniProtKB/Swiss-Prot
PhenoGen Crtc1 PhenoGen
UniProt CRTC1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q6ZQ85 UniProtKB/Swiss-Prot