Abce1 (ATP-binding cassette, sub-family E (OABP), member 1) - Rat Genome Database
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Gene: Abce1 (ATP-binding cassette, sub-family E (OABP), member 1) Mus musculus
Analyze
Symbol: Abce1
Name: ATP-binding cassette, sub-family E (OABP), member 1
RGD ID: 1313250
MGI Page MGI
Description: Is expressed in several structures, including brain ventricular layer; cranium; medulla oblongata basal plate mantle layer; thymus primordium; and vertebral axis musculature. Human ortholog(s) of this gene implicated in human immunodeficiency virus infectious disease. Orthologous to human ABCE1 (ATP binding cassette subfamily E member 1).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ATP-binding cassette sub-family E member 1; ATP-binding cassette, subfamily E, member 1; C79080; O; Oabp; R; ribonuclease 4 inhibitor; ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) inhibitor; RLI; RNase L inhibitor; Rnaseli; RNS41; RNS4I; RNS4l (Eye)
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm19061   Gm6640  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39880,410,071 - 80,438,369 (-)NCBIGRCm39mm39
GRCm39 Ensembl880,410,091 - 80,438,369 (-)Ensembl
GRCm38879,683,442 - 79,711,740 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl879,683,462 - 79,711,740 (-)EnsemblGRCm38mm10GRCm38
MGSCv37882,207,341 - 82,235,639 (-)NCBIGRCm37mm9NCBIm37
MGSCv36882,579,717 - 82,607,693 (-)NCBImm8
Celera883,959,260 - 83,987,564 (-)NCBICelera
Cytogenetic Map8C1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:9234238   PMID:9524254   PMID:10349636   PMID:10708515   PMID:10866653   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12477932   PMID:12520002  
PMID:12904583   PMID:14610273   PMID:15489334   PMID:15611179   PMID:16141072   PMID:16141073   PMID:16930510   PMID:17967808   PMID:18585418   PMID:18799693   PMID:21267068   PMID:21873635  
PMID:24457600   PMID:28380459   PMID:30196744   PMID:30457570   PMID:32325033  


Genomics

Comparative Map Data
Abce1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39880,410,071 - 80,438,369 (-)NCBIGRCm39mm39
GRCm39 Ensembl880,410,091 - 80,438,369 (-)Ensembl
GRCm38879,683,442 - 79,711,740 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl879,683,462 - 79,711,740 (-)EnsemblGRCm38mm10GRCm38
MGSCv37882,207,341 - 82,235,639 (-)NCBIGRCm37mm9NCBIm37
MGSCv36882,579,717 - 82,607,693 (-)NCBImm8
Celera883,959,260 - 83,987,564 (-)NCBICelera
Cytogenetic Map8C1NCBI
ABCE1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl4145,098,288 - 145,129,524 (+)EnsemblGRCh38hg38GRCh38
GRCh384145,098,311 - 145,129,524 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh374146,019,463 - 146,050,676 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364146,238,606 - 146,270,126 (+)NCBINCBI36hg18NCBI36
Build 344146,377,090 - 146,407,936NCBI
Celera4143,346,498 - 143,378,018 (+)NCBI
Cytogenetic Map4q31.21NCBI
HuRef4141,750,477 - 141,781,999 (+)NCBIHuRef
CHM1_14145,995,426 - 146,026,945 (+)NCBICHM1_1
Abce1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21928,205,566 - 28,230,489 (+)NCBI
Rnor_6.0 Ensembl1931,867,981 - 31,892,863 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01931,867,960 - 31,892,863 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01942,771,943 - 42,796,838 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41930,093,741 - 30,118,625 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11930,098,545 - 30,123,448 (+)NCBI
Celera1927,713,656 - 27,738,540 (+)NCBICelera
Cytogenetic Map19q11NCBI
Abce1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554281,029,399 - 1,058,902 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554281,029,909 - 1,058,902 (+)NCBIChiLan1.0ChiLan1.0
ABCE1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14149,105,912 - 149,137,028 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4149,105,912 - 149,137,028 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04137,445,210 - 137,476,309 (+)NCBIMhudiblu_PPA_v0panPan3
ABCE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1543,781,885 - 43,811,883 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11543,781,838 - 43,813,529 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Abce1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365353,956,490 - 3,985,002 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABCE1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl883,299,314 - 83,353,110 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1883,302,055 - 83,353,208 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2888,572,102 - 88,623,679 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ABCE1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1791,673,359 - 91,704,774 (+)NCBI
Abce1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248534,059,271 - 4,087,313 (+)NCBI

Position Markers
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS
RH126496  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38879,683,682 - 79,683,918UniSTSGRCm38
MGSCv37882,207,581 - 82,207,817UniSTSGRCm37
Celera883,959,500 - 83,959,736UniSTS
Cytogenetic Map8CUniSTS
Abce1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381416,633,699 - 16,633,933UniSTSGRCm38
MGSCv371417,466,213 - 17,466,447UniSTSGRCm37
Celera1412,334,989 - 12,335,223UniSTS
Cytogenetic Map8CUniSTS
cM Map8 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84763703081637146Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84763703081637146Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84773713481737254Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84879293982793021Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86826982782600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:588
Count of miRNA genes:384
Interacting mature miRNAs:452
Transcripts:ENSMUST00000080536
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_015751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC101687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC158348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV213051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB651928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD564438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U90446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000080536   ⟹   ENSMUSP00000079379
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl879,683,462 - 79,711,740 (-)Ensembl
RefSeq Acc Id: ENSMUST00000209354
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl879,692,799 - 79,699,413 (-)Ensembl
RefSeq Acc Id: ENSMUST00000211509
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl879,686,206 - 79,711,670 (-)Ensembl
RefSeq Acc Id: ENSMUST00000213842
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl879,708,072 - 79,711,650 (-)Ensembl
RefSeq Acc Id: NM_015751   ⟹   NP_056566
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39880,410,071 - 80,438,369 (-)NCBI
GRCm38879,683,442 - 79,711,740 (-)ENTREZGENE
MGSCv37882,207,341 - 82,235,639 (-)RGD
Celera883,959,260 - 83,987,564 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_152614
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39880,410,071 - 80,438,369 (-)NCBI
GRCm38879,683,442 - 79,711,740 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_056566   ⟸   NM_015751
- UniProtKB: P61222 (UniProtKB/Swiss-Prot),   Q3TJM9 (UniProtKB/TrEMBL),   Q3UHY8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000079379   ⟸   ENSMUST00000080536
Promoters
RGD ID:8667555
Promoter ID:EPDNEW_M11808
Type:initiation region
Name:Abce1_1
Description:Mus musculus ATP-binding cassette, sub-family E , member 1 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38879,711,677 - 79,711,737EPDNEW
RGD ID:6842761
Promoter ID:MM_KWN:54952
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_015751,   NM_026904,   UC009MIU.1,   UC009MIW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36882,234,781 - 82,235,797 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1195458 AgrOrtholog
Ensembl Genes ENSMUSG00000058355 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000079379 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000080536 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro 4Fe4S_Fe-S-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  4Fe4S_Fe_S_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AAA+_ATPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_transporter-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_transporter_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RLI1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RLI_dom_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNaseL-inhib_metal-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:24015 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1195458 ENTREZGENE
NCBI Gene 24015 ENTREZGENE
PANTHER PTHR19248 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ABC_tran UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fer4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RLI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Abce1 PhenoGen
PRINTS ABCEFAMILY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE 4FE4S_FER_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  4FE4S_FER_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_TRANSPORTER_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_TRANSPORTER_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ABCE1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TIU8_MOUSE UniProtKB/TrEMBL
  Q3TJM9 ENTREZGENE, UniProtKB/TrEMBL
  Q3UHY8 ENTREZGENE, UniProtKB/TrEMBL
  Q6NXX7_MOUSE UniProtKB/TrEMBL
  Q8C2N8_MOUSE UniProtKB/TrEMBL
UniProt Secondary O88793 UniProtKB/Swiss-Prot
  Q13181 UniProtKB/Swiss-Prot
  Q13864 UniProtKB/Swiss-Prot
  Q96AL0 UniProtKB/Swiss-Prot
  Q96B10 UniProtKB/Swiss-Prot
  Q99K66 UniProtKB/Swiss-Prot