Gm10283 (predicted gene 10283) - Rat Genome Database

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Gene: Gm10283 (predicted gene 10283) Mus musculus
Analyze
Symbol: Gm10283
Name: predicted gene 10283
RGD ID: 11083513
MGI Page MGI
Description:
Type: ncrna (Ensembl: protein-coding)
RefSeq Status: VALIDATED
Previously known as: EG330776; ENSMUSG00000070023
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39860,882,881 - 60,956,263 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl860,883,058 - 60,956,232 (-)EnsemblGRCm39 Ensembl
GRCm38860,429,847 - 60,503,223 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl860,430,024 - 60,503,198 (-)EnsemblGRCm38mm10GRCm38
MGSCv36863,321,989 - 63,395,371 (-)NCBIMGSCv36mm8
Celera863,018,852 - 63,090,642 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
cM Map830.84NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in Gm10283
2021 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:150
Count of miRNA genes:144
Interacting mature miRNAs:147
Transcripts:ENSMUST00000093494
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3250657271740637Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83429039768290537Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84474791478748059Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84809006482090180Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84819016882190288Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85050595884505958Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85913640493136404Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000093494   ⟹   ENSMUSP00000091206
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl860,883,058 - 60,956,232 (-)Ensembl
GRCm38.p6 Ensembl860,430,024 - 60,503,198 (-)Ensembl
RefSeq Acc Id: NR_188713
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39860,882,881 - 60,956,263 (-)NCBI
Protein Sequences
GenBank Protein BAC39471 (Get FASTA)   NCBI Sequence Viewer  
  EDL28633 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000091206.6
Reference Protein Sequences
RefSeq Acc Id: ENSMUSP00000091206   ⟸   ENSMUST00000093494

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8C3L5-F1-model_v2 AlphaFold Q8C3L5 1-117 view protein structure


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000070023 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000093494.6 UniProtKB/TrEMBL
MGD MGI:3647628 ENTREZGENE
NCBI Gene Gm10283 ENTREZGENE
PhenoGen Gm10283 PhenoGen
RNAcentral URS00026A1FB9 RNACentral
UniProt Q8C3L5_MOUSE UniProtKB/TrEMBL