Gm7984 (predicted gene 7984) - Rat Genome Database

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Gene: Gm7984 (predicted gene 7984) Mus musculus
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Symbol: Gm7984
Name: predicted gene 7984
RGD ID: 2294734
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: EG666211
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39876,125,136 - 76,126,113 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl876,125,139 - 76,125,676 (+)EnsemblGRCm39 Ensembl
GRCm38875,398,508 - 75,399,049 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl875,398,511 - 75,399,048 (+)EnsemblGRCm38mm10GRCm38
MGSCv37877,922,410 - 77,922,947 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36878,294,570 - 78,295,574 (+)NCBIMGSCv36mm8
Celera879,701,147 - 79,701,688 (+)NCBICelera
Cytogenetic Map8C1NCBI
cM Map835.65NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm7984
64 total Variants

Predicted Target Of
Summary Value
Count of predictions:34
Count of miRNA genes:34
Interacting mature miRNAs:34
Transcripts:ENSMUST00000060640
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 34 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84809006482090180Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse

1 to 10 of 34 rows
UniSTS:235930  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38875,398,542 - 75,398,787UniSTSGRCm38
MGSCv37877,922,441 - 77,922,686UniSTSGRCm37
Celera879,701,178 - 79,701,427UniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map2H1UniSTS
cM Map282.0UniSTS






RefSeq Transcripts XR_140911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_142328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC076974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000060640
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl876,125,139 - 76,125,676 (+)Ensembl
GRCm38.p6 Ensembl875,398,511 - 75,399,048 (+)Ensembl
RefSeq Acc Id: XR_140911
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38875,398,511 - 75,399,485 (+)NCBI
cM Map8 ENTREZGENE
RefSeq Acc Id: XR_142328
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
Celera879,701,147 - 79,702,125 (+)NCBI


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000049891 Ensembl
MGD MGI:3645839 ENTREZGENE
NCBI Gene 666211 ENTREZGENE
PhenoGen Gm7984 PhenoGen